Q9HS75 - HALSA - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

Q9HS75 - Acyl-CoA dehydrogenase

UniProt:	Q9HS75	Sequences: MRCVHEHVDVRGFRAPNHRVVQHFHVQVNPSRRHAHPFACAVLAAFGRGERVARCQGFYRTYPAAVQPRRMDVELLSDDVVPEHARAVKQDARAFAAEHIAPHAEEYYASGEYPWEVLEAAMDAGLVAQDIGEDYGGRGLDLTQMLAIAEEFFRADAGIALTLQLASFGAELVEEYGTPAQKDRLLTPVANNDQLTGLAVSEPEVGSNLAGMQTTAERDGDEYVLNGEKYWIGNGVEADWVTVYAKTGDTDDRYMNYSLFAVPTDTDGYEAEHIPEKMGMRASKQAHIVLDDCRVPEANLIGTEGGGFMMLTDFFNHGRVVVAGHGLGLAAAAFEEAWDFVHDRAGFGRTVSDFQSVQHSLADMRIEFESARALAYRAAEKVAAHDEPGLWAAMAKTKATEVATANAEQGMQFHGGRSNFTDRRIARVYRDVRIPVIYEGANEIQRNLVYRQSGDQ	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	456 (374)
Sequences:	29025 (15888)
Seq/√Len:	821.5

ECOLI - CAIA YDIO AIDB FADE
BACSU - FADE ACDC ACDA ACDB YDBM
HALSA - Q9HS75 Q9HRI6 Q9HRB3 Q9HPT2 Q9HQF0 Q9HMK7
SULSO - Q97UW6 Q97V73 Q97U78 Q97XW3 Q97WQ8 Q97VU6 Q97YZ6

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
222_E	294_R	3.996	1.00
226_N	292_D	3.791	1.00
367_E	405_A	3.437	1.00
99_H	120_A	3.348	1.00
219_D	294_R	2.913	1.00
188_P	193_D	2.878	1.00
218_R	297_E	2.871	1.00
179_P	183_D	2.849	1.00
270_E	291_D	2.821	1.00
258_S	300_L	2.761	1.00
93_R	151_E	2.683	1.00
106_E	110_S	2.598	1.00
141_D	144_Q	2.566	1.00
188_P	194_Q	2.442	1.00
360_S	409_Q	2.415	1.00
339_D	343_D	2.383	1.00
245_A	260_F	2.172	1.00
303_T	306_G	2.163	1.00
94_A	98_E	2.115	1.00
341_V	413_F	2.112	1.00
179_P	182_K	2.099	1.00
228_E	289_V	2.073	1.00
219_D	222_E	2.055	1.00
380_E	384_A	2.048	1.00
350_T	353_D	2.045	1.00
132_G	174_E	1.992	1.00
178_T	181_Q	1.989	1.00
331_A	372_R	1.987	1.00
306_G	309_M	1.984	1.00
421_T	426_A	1.952	1.00
82_P	85_A	1.854	1.00
150_E	372_R	1.845	1.00
218_R	304_E	1.838	1.00
300_L	304_E	1.820	1.00
401_E	442_N	1.807	1.00
241_V	264_T	1.783	1.00
228_E	287_H	1.770	1.00
85_A	144_Q	1.764	1.00
120_A	123_D	1.757	1.00
426_A	430_R	1.743	1.00
201_S	231_W	1.742	1.00
356_S	359_H	1.731	1.00
334_F	368_F	1.723	1.00
235_G	286_A	1.711	1.00
223_Y	260_F	1.696	1.00
331_A	335_E	1.692	1.00
345_A	350_T	1.685	1.00
197_G	241_V	1.653	1.00
119_E	123_D	1.630	1.00
341_V	357_V	1.625	1.00
217_E	226_N	1.611	1.00
266_T	293_C	1.602	1.00
224_V	294_R	1.597	1.00
381_K	391_W	1.594	1.00
219_D	224_V	1.583	1.00
370_S	398_K	1.573	1.00
296_P	299_N	1.561	1.00
346_G	354_F	1.558	1.00
225_L	260_F	1.555	1.00
263_P	299_N	1.546	1.00
349_R	353_D	1.542	1.00
417_R	423_R	1.538	1.00
85_A	141_D	1.533	1.00
154_R	335_E	1.532	1.00
336_E	424_R	1.530	1.00
86_R	89_K	1.522	1.00
183_D	187_T	1.510	1.00
297_E	300_L	1.507	1.00
188_P	191_N	1.504	1.00
218_R	222_E	1.500	1.00
248_G	251_D	1.499	1.00
364_M	406_N	1.495	1.00
223_Y	297_E	1.493	1.00
184_R	298_A	1.491	1.00
90_Q	94_A	1.487	1.00
151_E	154_R	1.486	1.00
377_R	381_K	1.479	1.00
236_V	286_A	1.475	1.00
371_A	399_A	1.473	1.00
87_A	90_Q	1.466	1.00
176_Y	313_D	1.465	1.00
184_R	188_P	1.463	1.00
357_V	413_F	1.445	1.00
397_T	442_N	1.440	1.00
133_E	139_G	1.438	1.00
96_A	155_A	1.433	1.00
226_N	291_D	1.428	1.00
135_Y	182_K	1.424	1.00
87_A	91_D	1.410	1.00
221_D	297_E	1.406	1.00
222_E	297_E	1.401	1.00
263_P	266_T	1.399	1.00
216_A	260_F	1.394	1.00
272_E	287_H	1.393	1.00
180_A	184_R	1.365	1.00
369_E	377_R	1.364	1.00
336_E	339_D	1.364	1.00
270_E	289_V	1.363	1.00
404_T	436_V	1.361	1.00
89_K	151_E	1.357	1.00
333_A	407_A	1.347	1.00
363_D	446_R	1.346	1.00
338_W	342_H	1.338	1.00
223_Y	304_E	1.334	1.00
405_A	409_Q	1.332	1.00
364_M	409_Q	1.327	1.00
225_L	243_V	1.318	1.00
272_E	289_V	1.316	1.00
295_V	299_N	1.314	1.00
199_A	232_I	1.314	1.00
264_T	269_Y	1.313	1.00
109_A	276_E	1.307	1.00
202_E	229_K	1.307	1.00
408_E	433_R	1.305	1.00
129_Q	148_I	1.291	1.00
408_E	436_V	1.288	1.00
107_Y	282_A	1.283	1.00
85_A	147_A	1.267	1.00
332_A	336_E	1.267	1.00
334_F	338_W	1.262	1.00
204_E	213_Q	1.260	1.00
115_W	119_E	1.260	1.00
92_A	126_L	1.251	1.00
269_Y	293_C	1.250	1.00
83_E	87_A	1.244	1.00
247_T	258_S	1.241	1.00
154_R	331_A	1.233	1.00
381_K	386_D	1.232	1.00
316_N	389_G	1.227	1.00
180_A	298_A	1.226	1.00
86_R	90_Q	1.226	1.00
83_E	86_R	1.225	1.00
91_D	124_A	1.220	1.00
360_S	443_E	1.214	1.00
224_V	292_D	1.211	1.00
131_I	190_A	1.210	1.00
185_L	240_W	1.207	1.00
368_F	406_N	1.206	1.00
276_E	421_T	1.201	1.00
142_L	383_A	1.200	1.00
189_V	196_T	1.200	1.00
336_E	414_H	1.196	1.00
308_F	312_T	1.191	1.00
269_Y	288_I	1.187	1.00
349_R	354_F	1.179	1.00
243_V	262_V	1.170	1.00
120_A	124_A	1.170	1.00
214_T	225_L	1.170	1.00
221_D	294_R	1.168	1.00
194_Q	239_D	1.168	1.00
330_A	368_F	1.167	1.00
181_Q	261_A	1.160	1.00
89_K	147_A	1.159	1.00
393_A	445_Q	1.158	1.00
218_R	223_Y	1.156	1.00
410_G	425_I	1.155	1.00
119_E	193_D	1.154	1.00
403_A	432_V	1.150	1.00
79_D	380_E	1.145	1.00
433_R	436_V	1.145	1.00
337_A	410_G	1.141	1.00
244_Y	259_L	1.137	1.00
103_H	107_Y	1.136	1.00
324_G	375_A	1.134	1.00
366_I	394_M	1.129	1.00
264_T	271_A	1.128	1.00
182_K	186_L	1.128	1.00
187_T	191_N	1.126	1.00
318_G	439_E	1.122	1.00
266_T	299_N	1.121	1.00
244_Y	257_Y	1.118	1.00
141_D	383_A	1.115	1.00
180_A	183_D	1.112	1.00
146_L	379_A	1.109	1.00
150_E	376_Y	1.104	1.00
377_R	380_E	1.098	1.00
268_G	293_C	1.098	1.00
404_T	408_E	1.095	1.00
181_Q	185_L	1.090	1.00
215_T	226_N	1.090	1.00
365_R	369_E	1.086	1.00
371_A	402_V	1.078	1.00
223_Y	247_T	1.075	1.00
436_V	442_N	1.075	1.00
177_G	181_Q	1.074	1.00
258_S	304_E	1.074	1.00
91_D	126_L	1.072	1.00
217_E	224_V	1.065	1.00
404_T	429_Y	1.061	1.00
243_V	290_L	1.056	1.00
140_L	144_Q	1.055	1.00
330_A	406_N	1.053	1.00
153_F	160_A	1.049	1.00
92_A	96_A	1.043	1.00
225_L	245_A	1.041	1.00
134_D	183_D	1.041	1.00
131_I	170_A	1.038	1.00
184_R	299_N	1.036	1.00
401_E	436_V	1.035	1.00
122_M	127_V	1.034	1.00
119_E	122_M	1.034	1.00
196_T	240_W	1.031	1.00
169_G	196_T	1.031	1.00
199_A	241_V	1.026	1.00
199_A	290_L	1.023	1.00
175_E	313_D	1.019	1.00
146_L	324_G	1.015	1.00
103_H	106_E	1.007	1.00
95_F	120_A	1.003	1.00
367_E	402_V	1.000	1.00
397_T	446_R	0.999	1.00
96_A	152_F	0.986	1.00
184_R	263_P	0.983	1.00
332_A	428_V	0.979	1.00
216_A	245_A	0.978	1.00
150_E	331_A	0.976	1.00
407_A	432_V	0.975	1.00
294_R	297_E	0.975	1.00
105_E	109_A	0.974	1.00
241_V	269_Y	0.974	1.00
338_W	361_L	0.974	1.00
143_T	380_E	0.967	1.00
241_V	288_I	0.967	1.00
367_E	409_Q	0.966	1.00
333_A	428_V	0.964	1.00
156_D	159_I	0.963	1.00
208_N	211_G	0.962	1.00
217_E	292_D	0.960	1.00
342_H	352_S	0.957	1.00
231_W	417_R	0.957	1.00
373_A	377_R	0.945	1.00
341_V	352_S	0.944	1.00
327_L	368_F	0.943	1.00
116_E	119_E	0.943	1.00
442_N	446_R	0.942	1.00
134_D	179_P	0.937	1.00
378_A	395_A	0.935	1.00
225_L	295_V	0.934	1.00
181_Q	299_N	0.933	1.00
327_L	375_A	0.933	1.00
176_Y	310_M	0.921	1.00
400_T	442_N	0.921	1.00
365_R	394_M	0.919	1.00
341_V	351_V	0.918	1.00
169_G	242_T	0.913	1.00
388_P	391_W	0.913	1.00
231_W	420_F	0.909	1.00
95_F	124_A	0.907	1.00
220_G	294_R	0.907	1.00
207_S	444_I	0.906	1.00
197_G	238_A	0.904	1.00
230_Y	287_H	0.904	1.00
358_Q	447_N	0.903	1.00
402_V	405_A	0.903	1.00
235_G	271_A	0.902	1.00
199_A	243_V	0.900	1.00
92_A	148_I	0.899	1.00
278_M	429_Y	0.899	1.00
339_D	342_H	0.899	1.00
267_D	294_R	0.898	1.00
115_W	239_D	0.894	1.00
248_G	256_N	0.894	1.00
401_E	446_R	0.892	1.00
359_H	447_N	0.890	1.00
93_R	97_A	0.890	1.00
248_G	252_D	0.890	1.00
401_E	405_A	0.889	1.00
97_A	154_R	0.888	1.00
212_M	257_Y	0.883	1.00
260_F	300_L	0.881	1.00
197_G	264_T	0.875	1.00
95_F	121_A	0.873	1.00
223_Y	300_L	0.872	1.00
158_G	282_A	0.871	1.00
109_A	421_T	0.871	1.00
341_V	361_L	0.871	1.00
326_G	435_P	0.865	1.00
280_M	434_I	0.862	1.00
239_D	265_D	0.862	1.00
402_V	406_N	0.860	1.00
266_T	269_Y	0.857	1.00
411_M	429_Y	0.856	1.00
135_Y	179_P	0.855	1.00
367_E	398_K	0.854	1.00
132_G	135_Y	0.854	1.00
260_F	295_V	0.853	1.00
240_W	263_P	0.853	1.00
322_V	439_E	0.853	1.00
240_W	261_A	0.853	1.00
185_L	261_A	0.851	1.00
363_D	367_E	0.851	1.00
81_V	85_A	0.837	1.00
411_M	425_I	0.834	1.00
408_E	429_Y	0.833	1.00
216_A	247_T	0.833	1.00
330_A	402_V	0.831	1.00
360_S	413_F	0.828	1.00
198_L	311_L	0.827	1.00
222_E	298_A	0.827	1.00
108_Y	430_R	0.827	1.00
222_E	296_P	0.826	1.00
407_A	428_V	0.826	1.00
105_E	427_R	0.822	1.00
404_T	433_R	0.820	1.00
121_A	126_L	0.820	1.00
200_V	315_F	0.819	1.00
366_I	397_T	0.818	1.00
212_M	244_Y	0.816	1.00
337_A	413_F	0.812	1.00
246_K	257_Y	0.812	1.00
278_M	426_A	0.805	1.00
199_A	288_I	0.804	1.00
374_L	394_M	0.804	1.00
217_E	248_G	0.802	1.00
435_P	438_Y	0.801	1.00
89_K	93_R	0.800	1.00
248_G	305_G	0.795	1.00
407_A	429_Y	0.793	1.00
258_S	305_G	0.793	1.00
434_I	438_Y	0.793	1.00
252_D	255_M	0.792	1.00
91_D	94_A	0.791	1.00
134_D	137_G	0.790	1.00
337_A	341_V	0.790	1.00
334_F	365_R	0.789	1.00
194_Q	240_W	0.788	1.00
337_A	414_H	0.788	1.00
242_T	259_L	0.788	1.00
258_S	302_G	0.784	1.00
178_T	182_K	0.778	1.00
327_L	371_A	0.776	1.00
242_T	301_I	0.774	1.00
366_I	398_K	0.773	1.00
116_E	120_A	0.772	1.00
335_E	339_D	0.770	1.00
244_Y	311_L	0.766	1.00
103_H	116_E	0.763	1.00
300_L	303_T	0.762	1.00
253_R	256_N	0.761	1.00
96_A	100_I	0.761	1.00
200_V	209_L	0.761	1.00
306_G	310_M	0.759	1.00
219_D	297_E	0.758	1.00
323_A	395_A	0.757	1.00
398_K	402_V	0.754	1.00
143_T	376_Y	0.753	1.00
246_K	249_D	0.752	1.00
333_A	410_G	0.744	1.00
364_M	410_G	0.744	1.00
247_T	304_E	0.742	1.00
202_E	214_T	0.737	1.00
95_F	99_H	0.737	1.00
143_T	383_A	0.732	1.00
130_D	145_M	0.731	1.00
290_L	293_C	0.730	1.00
326_G	400_T	0.729	1.00
351_V	354_F	0.729	1.00
369_E	372_R	0.728	1.00
329_L	403_A	0.728	1.00
239_D	264_T	0.727	1.00
97_A	101_A	0.724	1.00
369_E	373_A	0.724	1.00
185_L	299_N	0.723	1.00
340_F	417_R	0.721	1.00
212_M	246_K	0.721	1.00
246_K	256_N	0.721	1.00
407_A	425_I	0.720	1.00
374_L	395_A	0.720	1.00
97_A	155_A	0.719	1.00
214_T	229_K	0.718	1.00
225_L	262_V	0.718	1.00
271_A	288_I	0.717	1.00
134_D	182_K	0.715	1.00
358_Q	450_Y	0.715	1.00
154_R	332_A	0.712	1.00
363_D	405_A	0.710	1.00
323_A	399_A	0.705	1.00
405_A	408_E	0.702	1.00
329_L	432_V	0.697	1.00
412_Q	433_R	0.695	1.00
355_Q	359_H	0.692	1.00
215_T	249_D	0.691	1.00
185_L	194_Q	0.690	1.00
336_E	428_V	0.690	1.00
216_A	223_Y	0.689	1.00
359_H	363_D	0.686	1.00
279_G	431_D	0.685	1.00
81_V	86_R	0.685	1.00
429_Y	433_R	0.684	1.00
329_L	428_V	0.682	1.00
280_M	438_Y	0.681	1.00
354_F	358_Q	0.680	1.00
334_F	453_S	0.680	1.00
81_V	147_A	0.677	1.00
100_I	117_V	0.677	1.00
88_V	144_Q	0.676	1.00
85_A	143_T	0.670	1.00
265_D	269_Y	0.670	1.00
337_A	364_M	0.669	1.00
370_S	374_L	0.667	1.00
323_A	375_A	0.666	1.00
411_M	418_S	0.665	1.00
88_V	148_I	0.665	1.00
375_A	399_A	0.663	1.00
394_M	449_V	0.662	1.00
363_D	409_Q	0.661	1.00
297_E	304_E	0.660	1.00
390_L	452_Q	0.659	1.00
218_R	224_V	0.659	1.00
94_A	97_A	0.657	1.00
220_G	224_V	0.657	1.00
143_T	147_A	0.654	1.00
374_L	398_K	0.654	1.00
189_V	240_W	0.650	1.00
89_K	150_E	0.647	1.00
134_D	139_G	0.647	1.00
132_G	137_G	0.646	1.00
170_A	189_V	0.646	1.00
371_A	398_K	0.645	1.00
445_Q	448_L	0.644	1.00
369_E	374_L	0.643	1.00
403_A	407_A	0.641	1.00
357_V	360_S	0.640	1.00
279_G	419_N	0.639	1.00
447_N	451_R	0.638	1.00
441_A	444_I	0.637	1.00
303_T	310_M	0.636	1.00
84_H	87_A	0.635	1.00
236_V	284_K	0.634	1.00
331_A	365_R	0.632	1.00
84_H	144_Q	0.632	1.00
344_R	347_F	0.630	1.00
115_W	195_L	0.630	1.00
414_H	425_I	0.630	1.00
276_E	281_R	0.628	1.00
346_G	351_V	0.624	1.00
117_V	159_I	0.622	1.00
106_E	109_A	0.621	1.00
347_F	354_F	0.620	1.00
247_T	256_N	0.619	1.00
203_P	228_E	0.619	1.00
221_D	298_A	0.614	1.00
260_F	297_E	0.613	1.00
81_V	376_Y	0.611	1.00
367_E	370_S	0.610	1.00
185_L	263_P	0.609	1.00
105_E	424_R	0.606	1.00
117_V	120_A	0.605	1.00
320_V	379_A	0.604	1.00
232_I	288_I	0.604	1.00
93_R	155_A	0.601	1.00
261_A	301_I	0.600	1.00
397_T	449_V	0.600	1.00
172_L	314_F	0.600	1.00
170_A	186_L	0.597	1.00
88_V	92_A	0.596	1.00
93_R	154_R	0.595	1.00
172_L	176_Y	0.594	1.00
129_Q	140_L	0.592	1.00
360_S	412_Q	0.591	1.00
100_I	159_I	0.590	1.00
316_N	392_A	0.588	1.00
147_A	151_E	0.588	1.00
371_A	395_A	0.587	1.00
397_T	401_E	0.587	1.00
101_A	104_A	0.586	1.00
260_F	299_N	0.586	1.00
214_T	290_L	0.585	1.00
259_L	311_L	0.585	1.00
357_V	361_L	0.585	1.00
214_T	243_V	0.584	1.00
249_D	252_D	0.583	1.00
235_G	288_I	0.582	1.00
332_A	424_R	0.579	1.00
131_I	135_Y	0.579	1.00
115_W	237_E	0.578	1.00
332_A	335_E	0.578	1.00
82_P	144_Q	0.578	1.00
364_M	413_F	0.577	1.00
172_L	310_M	0.577	1.00
330_A	333_A	0.577	1.00
214_T	245_A	0.576	1.00
344_R	416_G	0.575	1.00
330_A	371_A	0.574	1.00
374_L	378_A	0.573	1.00
345_A	353_D	0.572	1.00
112_E	115_W	0.572	1.00
173_V	177_G	0.570	1.00
372_R	376_Y	0.570	1.00
157_A	329_L	0.569	1.00
379_A	383_A	0.569	1.00
200_V	244_Y	0.568	1.00
278_M	430_R	0.567	1.00
111_G	281_R	0.567	1.00
128_A	190_A	0.565	1.00
412_Q	443_E	0.565	1.00
214_T	227_G	0.565	1.00
228_E	272_E	0.563	1.00
427_R	431_D	0.562	1.00
277_K	285_Q	0.562	1.00
237_E	284_K	0.559	1.00
131_I	174_E	0.557	1.00
145_M	321_V	0.555	1.00
377_R	391_W	0.554	1.00
223_Y	295_V	0.554	1.00
218_R	260_F	0.553	1.00
444_I	447_N	0.551	1.00
80_V	86_R	0.551	1.00
155_A	332_A	0.549	1.00
331_A	368_F	0.547	1.00
243_V	293_C	0.547	1.00
265_D	271_A	0.546	1.00
145_M	167_S	0.544	1.00
169_G	189_V	0.541	1.00
259_L	310_M	0.541	1.00
161_L	280_M	0.541	1.00
147_A	376_Y	0.540	1.00
247_T	260_F	0.540	1.00
79_D	377_R	0.540	1.00
126_L	148_I	0.539	1.00
248_G	253_R	0.536	1.00
91_D	138_R	0.535	1.00
364_M	402_V	0.533	1.00
142_L	382_V	0.533	1.00
340_F	343_D	0.531	1.00
354_F	357_V	0.530	1.00
360_S	363_D	0.530	1.00
177_G	182_K	0.530	1.00
324_G	328_G	0.529	1.00
361_L	453_S	0.528	1.00
81_V	143_T	0.527	1.00
222_E	299_N	0.526	1.00
218_R	294_R	0.523	1.00
218_R	221_D	0.522	1.00
424_R	428_V	0.521	1.00
345_A	348_G	0.521	1.00
345_A	349_R	0.519	1.00
404_T	432_V	0.519	1.00
266_T	295_V	0.519	1.00
445_Q	449_V	0.519	1.00
210_A	254_Y	0.517	1.00
122_M	192_N	0.516	1.00
233_G	285_Q	0.515	1.00
366_I	370_S	0.515	1.00
135_Y	187_T	0.515	1.00
240_W	299_N	0.515	1.00
367_E	401_E	0.515	1.00
146_L	376_Y	0.511	1.00
302_G	305_G	0.511	1.00
271_A	286_A	0.510	1.00
403_A	435_P	0.509	1.00
174_E	182_K	0.508	1.00
262_V	293_C	0.508	1.00
365_R	453_S	0.507	1.00
416_G	419_N	0.506	1.00
338_W	453_S	0.506	1.00
95_F	117_V	0.504	1.00
169_G	172_L	0.504	1.00
356_S	360_S	0.502	1.00
205_V	213_Q	0.501	1.00
233_G	283_S	0.500	1.00

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2jifA	4	0.8311	100	0.221	Contact Map
2d29A	4	0.8355	100	0.224	Contact Map
2z1qA	2	0.8575	100	0.226	Contact Map
4l1fA	4	0.8311	100	0.228	Contact Map
3owaA	3	0.8596	100	0.228	Contact Map
1rx0A	4	0.8399	100	0.228	Contact Map
3pfdA	4	0.8092	100	0.229	Contact Map
1ivhA	4	0.8399	100	0.23	Contact Map
1bucA	4	0.8289	100	0.231	Contact Map
1ukwA	4	0.8311	100	0.231	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0116 seconds.