Q9HS26 - HALSA - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

Q9HS26 - Na+/H+ antiporter

UniProt:	Q9HS26	Sequences: MSTDQTDGFDGGVSAGDDSEPEIDFYGGKLASAFPLVFFVVWAIVQSGVLRVSDTTGLVAGMLVALIFGMFLVKGSWAGYANTIFAGMTQRVAATAIVAWLWAGMFAETIQTGQFVSGLVWAAEAAGIGGAVFPAATFILAGLLATGIGSGYGTTVAFTALFFPAGVALGANPALLFGAILSGAVFGDNLAPVSDTTIVSAVTQDADIGGVVASRFKYAGVAAVLSFAAYLGAGAVMDGISVAGDASAILGSNVGPTGLLHLLSMATVIGTAIAGRHIVEAISWGIVVAFVLNVVFGLADVSEMLVFRASDSLWIARELSVLPFVEAINTSPEGVTSSVGGSLYAGAQGFFPLIVLVLLIVAGAQIMIRGGGFRAIQDFLLESVATTVRRAELTMVLGTAFVNSMITINTAAEIAIAPYIARLGERFNINSYRRANILDANTSALGYIFPWSGGVLVGYAALADLPTKYDWFTRGMVVDPTEVVPFVFHGWLLVGVFVFSALTGFGLEYISDRESEEVARA	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	521 (438)
Sequences:	2177 (1432)
Seq/√Len:	68.4

BACSU - MLEN NHAC
HALSA - Q9HS26 Q9HNF7 ARCD

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
335_V	340_G	6.753	1.00
229_A	488_F	6.394	1.00
150_S	153_G	4.769	1.00
389_R	502_L	4.109	1.00
425_E	431_S	3.883	1.00
267_T	288_V	3.854	1.00
166_G	176_L	3.511	1.00
142_G	223_A	3.412	1.00
155_T	458_G	3.346	1.00
224_V	228_A	3.173	1.00
387_T	390_R	3.070	1.00
190_L	216_F	3.003	1.00
76_S	79_G	2.974	1.00
135_A	231_L	2.934	1.00
135_A	227_F	2.919	1.00
214_S	433_R	2.872	1.00
389_R	501_A	2.805	1.00
395_M	424_G	2.771	1.00
163_F	173_P	2.747	1.00
300_D	303_E	2.725	1.00
225_L	492_L	2.711	1.00
379_F	383_S	2.653	1.00
393_L	502_L	2.528	1.00
101_L	347_A	2.419	1.00
268_V	285_G	2.389	1.00
134_P	175_L	2.339	1.00
334_G	340_G	2.338	1.00
368_I	418_P	2.226	1.00
118_G	257_T	2.212	1.00
487_V	490_G	2.211	1.00
404_S	449_F	2.210	1.00
137_T	162_F	2.202	1.00
86_A	369_R	2.199	1.00
138_F	223_A	2.194	1.00
398_G	420_I	2.190	1.00
403_N	445_L	2.161	1.00
480_P	484_V	2.152	1.00
270_G	274_A	2.129	1.00
396_V	441_N	2.122	1.00
205_D	431_S	2.117	1.00
179_A	230_Y	2.115	1.00
396_V	498_V	2.069	1.00
488_F	492_L	2.054	1.00
290_F	304_M	2.034	1.00
69_G	80_Y	2.026	1.00
228_A	232_G	1.998	1.00
118_G	122_A	1.965	1.00
429_I	433_R	1.964	1.00
83_T	369_R	1.951	1.00
109_T	286_I	1.943	1.00
222_A	492_L	1.932	1.00
206_A	431_S	1.927	1.00
285_G	289_A	1.924	1.00
256_P	259_L	1.899	1.00
231_L	235_A	1.892	1.00
225_L	496_V	1.883	1.00
29_K	379_F	1.878	1.00
459_Y	480_P	1.870	1.00
112_T	307_F	1.836	1.00
207_D	210_G	1.818	1.00
102_W	279_V	1.813	1.00
115_F	264_S	1.812	1.00
218_Y	440_A	1.795	1.00
226_S	230_Y	1.773	1.00
118_G	262_L	1.723	1.00
495_G	499_F	1.716	1.00
432_Y	508_E	1.705	1.00
125_A	247_S	1.686	1.00
351_F	355_V	1.677	0.99
488_F	491_W	1.676	0.99
29_K	376_I	1.675	0.99
294_V	304_M	1.663	0.99
386_T	390_R	1.644	0.99
177_F	462_L	1.623	0.99
107_A	156_V	1.614	0.99
271_T	284_W	1.610	0.99
374_R	378_D	1.609	0.99
399_T	438_L	1.597	0.99
63_L	283_S	1.590	0.99
400_A	445_L	1.586	0.99
166_G	173_P	1.565	0.99
487_V	491_W	1.553	0.99
171_A	176_L	1.546	0.99
122_A	259_L	1.542	0.99
93_A	361_V	1.538	0.99
87_G	365_Q	1.533	0.99
292_L	296_F	1.513	0.99
38_F	64_V	1.510	0.99
69_G	370_G	1.509	0.99
393_L	498_V	1.507	0.99
45_V	50_L	1.499	0.99
44_I	48_G	1.481	0.99
206_A	210_G	1.474	0.99
261_H	296_F	1.471	0.99
172_N	237_M	1.459	0.99
86_A	89_T	1.457	0.99
175_L	233_A	1.455	0.99
196_T	413_E	1.450	0.98
176_L	180_I	1.448	0.98
201_A	206_A	1.445	0.98
203_T	417_A	1.439	0.98
201_A	205_D	1.436	0.98
261_H	292_L	1.416	0.98
392_E	433_R	1.399	0.98
481_T	484_V	1.399	0.98
109_T	290_F	1.398	0.98
247_S	251_G	1.394	0.98
500_S	506_G	1.392	0.98
457_V	461_A	1.392	0.98
182_S	230_Y	1.390	0.98
437_I	497_F	1.383	0.98
499_F	503_T	1.383	0.98
189_N	439_D	1.380	0.98
210_G	432_Y	1.380	0.98
181_L	455_V	1.379	0.98
112_T	293_N	1.378	0.98
396_V	497_F	1.369	0.98
266_A	270_G	1.368	0.98
233_A	488_F	1.361	0.98
421_A	425_E	1.357	0.98
291_V	295_V	1.355	0.98
225_L	229_A	1.347	0.98
229_A	233_A	1.339	0.97
477_V	480_P	1.336	0.97
260_L	292_L	1.331	0.97
178_G	182_S	1.329	0.97
446_G	454_G	1.314	0.97
109_T	289_A	1.311	0.97
122_A	262_L	1.303	0.97
108_E	112_T	1.288	0.97
101_L	351_F	1.282	0.97
111_Q	345_A	1.281	0.97
214_S	432_Y	1.272	0.96
484_V	491_W	1.271	0.96
134_P	171_A	1.262	0.96
215_R	439_D	1.261	0.96
446_G	452_S	1.258	0.96
139_I	227_F	1.253	0.96
480_P	483_V	1.246	0.96
85_F	89_T	1.245	0.96
444_A	493_L	1.241	0.96
417_A	438_L	1.239	0.96
222_A	493_L	1.232	0.96
219_A	493_L	1.221	0.96
170_G	173_P	1.219	0.96
422_R	426_R	1.217	0.95
26_Y	378_D	1.217	0.95
159_T	177_F	1.205	0.95
98_V	279_V	1.200	0.95
244_G	248_A	1.199	0.95
189_N	443_S	1.198	0.95
229_A	492_L	1.191	0.95
440_A	497_F	1.188	0.95
52_V	55_T	1.181	0.95
39_F	43_A	1.177	0.95
389_R	498_V	1.176	0.95
163_F	177_F	1.173	0.94
348_Q	352_P	1.173	0.94
263_L	292_L	1.163	0.94
348_Q	351_F	1.161	0.94
77_W	280_E	1.158	0.94
491_W	495_G	1.153	0.94
408_I	412_A	1.148	0.94
448_I	491_W	1.145	0.94
166_G	170_G	1.144	0.94
336_T	340_G	1.142	0.94
293_N	299_A	1.139	0.94
226_S	492_L	1.132	0.93
65_A	366_I	1.128	0.93
337_S	341_G	1.127	0.93
259_L	266_A	1.125	0.93
142_G	186_F	1.124	0.93
185_V	458_G	1.123	0.93
478_V	482_E	1.119	0.93
399_T	442_T	1.117	0.93
389_R	393_L	1.113	0.93
84_I	362_A	1.112	0.93
31_A	72_L	1.112	0.93
122_A	257_T	1.110	0.93
391_A	423_L	1.109	0.93
436_N	440_A	1.104	0.92
375_A	379_F	1.103	0.92
205_D	421_A	1.098	0.92
244_G	247_S	1.097	0.92
88_M	98_V	1.092	0.92
260_L	263_L	1.088	0.92
227_F	231_L	1.086	0.92
392_E	501_A	1.083	0.92
186_F	439_D	1.083	0.92
197_T	439_D	1.075	0.91
137_T	179_A	1.075	0.91
216_F	220_G	1.067	0.91
423_L	426_R	1.062	0.91
423_L	427_F	1.061	0.91
185_V	452_S	1.057	0.91
128_I	132_V	1.056	0.91
28_G	32_S	1.052	0.91
78_A	139_I	1.049	0.90
492_L	496_V	1.049	0.90
368_I	374_R	1.048	0.90
115_F	261_H	1.047	0.90
246_A	249_I	1.046	0.90
32_S	35_P	1.043	0.90
271_T	276_R	1.038	0.90
299_A	303_E	1.037	0.90
353_L	454_G	1.036	0.90
439_D	443_S	1.036	0.90
393_L	397_L	1.030	0.90
162_F	180_I	1.028	0.89
96_A	410_T	1.023	0.89
53_S	57_G	1.022	0.89
128_I	136_A	1.022	0.89
503_T	506_G	1.020	0.89
222_A	496_V	1.011	0.89
79_G	82_N	1.003	0.88
33_A	37_V	1.003	0.88
345_A	349_G	0.996	0.88
245_D	249_I	0.993	0.88
28_G	31_A	0.990	0.88
67_I	71_F	0.986	0.87
267_T	270_G	0.986	0.87
459_Y	479_D	0.985	0.87
211_V	435_A	0.984	0.87
59_V	105_M	0.982	0.87
118_G	261_H	0.977	0.87
190_L	220_G	0.976	0.87
71_F	74_K	0.975	0.87
68_F	72_L	0.970	0.87
448_I	487_V	0.969	0.87
181_L	458_G	0.965	0.86
496_V	499_F	0.963	0.86
263_L	288_V	0.961	0.86
78_A	82_N	0.960	0.86
140_L	162_F	0.959	0.86
299_A	307_F	0.956	0.86
82_N	86_A	0.955	0.86
38_F	68_F	0.954	0.86
221_V	224_V	0.952	0.86
248_A	251_G	0.951	0.85
258_G	261_H	0.944	0.85
204_Q	435_A	0.941	0.85
123_A	255_G	0.940	0.85
388_V	427_F	0.937	0.85
73_V	76_S	0.934	0.84
97_I	354_I	0.928	0.84
385_A	390_R	0.927	0.84
181_L	406_I	0.924	0.84
142_G	146_T	0.919	0.83
422_R	425_E	0.917	0.83
489_H	493_L	0.915	0.83
218_Y	436_N	0.915	0.83
334_G	344_Y	0.914	0.83
219_A	439_D	0.910	0.83
174_A	482_E	0.907	0.83
444_A	489_H	0.907	0.83
97_I	357_V	0.907	0.83
102_W	286_I	0.903	0.82
27_G	375_A	0.900	0.82
141_A	158_F	0.898	0.82
409_N	494_V	0.894	0.82
163_F	167_V	0.893	0.82
169_L	176_L	0.891	0.82
35_P	39_F	0.890	0.81
141_A	145_A	0.889	0.81
496_V	500_S	0.889	0.81
250_L	257_T	0.888	0.81
134_P	172_N	0.888	0.81
54_D	57_G	0.887	0.81
248_A	287_V	0.885	0.81
83_T	365_Q	0.885	0.81
34_F	64_V	0.884	0.81
400_A	404_S	0.883	0.81
189_N	219_A	0.883	0.81
199_V	413_E	0.882	0.81
31_A	71_F	0.879	0.81
387_T	427_F	0.879	0.81
152_Y	457_V	0.878	0.81
54_D	453_G	0.873	0.80
37_V	40_V	0.873	0.80
211_V	439_D	0.865	0.80
142_G	145_A	0.864	0.80
303_E	307_F	0.861	0.79
222_A	226_S	0.860	0.79
105_M	286_I	0.857	0.79
388_V	429_I	0.855	0.79
381_L	426_R	0.855	0.79
256_P	295_V	0.850	0.78
352_P	355_V	0.847	0.78
167_V	173_P	0.845	0.78
385_A	391_A	0.841	0.78
147_G	269_I	0.824	0.76
196_T	439_D	0.822	0.76
449_F	452_S	0.814	0.75
221_V	496_V	0.812	0.75
113_G	292_L	0.812	0.75
479_D	482_E	0.810	0.75
214_S	429_I	0.808	0.75
226_S	229_A	0.808	0.75
500_S	503_T	0.804	0.74
385_A	394_T	0.803	0.74
97_I	116_V	0.800	0.74
54_D	58_L	0.796	0.74
405_M	447_Y	0.796	0.74
224_V	251_G	0.794	0.73
163_F	478_V	0.793	0.73
189_N	211_V	0.792	0.73
396_V	501_A	0.792	0.73
88_M	358_L	0.791	0.73
38_F	69_G	0.789	0.73
99_A	103_A	0.787	0.73
62_M	363_G	0.787	0.73
498_V	502_L	0.785	0.73
445_L	490_G	0.785	0.73
217_K	505_F	0.783	0.72
455_V	483_V	0.780	0.72
151_G	195_D	0.780	0.72
113_G	429_I	0.778	0.72
379_F	384_V	0.776	0.72
151_G	196_T	0.774	0.72
408_I	453_G	0.774	0.72
181_L	487_V	0.774	0.72
424_G	434_R	0.773	0.71
267_T	284_W	0.770	0.71
104_G	350_F	0.770	0.71
300_D	307_F	0.768	0.71
462_L	478_V	0.768	0.71
145_A	154_T	0.767	0.71
416_I	442_T	0.762	0.70
424_G	437_I	0.761	0.70
197_T	200_S	0.759	0.70
135_A	145_A	0.759	0.70
408_I	446_G	0.758	0.70
409_N	446_G	0.752	0.69
43_A	47_S	0.750	0.69
197_T	212_V	0.747	0.69
151_G	184_A	0.746	0.69
87_G	361_V	0.746	0.69
228_A	337_S	0.742	0.68
190_L	196_T	0.742	0.68
413_E	443_S	0.742	0.68
361_V	403_N	0.741	0.68
409_N	454_G	0.739	0.68
337_S	340_G	0.738	0.68
433_R	501_A	0.735	0.68
154_T	184_A	0.734	0.68
188_D	439_D	0.734	0.68
412_A	416_I	0.734	0.68
150_S	409_N	0.734	0.68
288_V	292_L	0.732	0.67
302_S	488_F	0.730	0.67
233_A	237_M	0.729	0.67
29_K	375_A	0.729	0.67
35_P	65_A	0.728	0.67
62_M	359_L	0.725	0.67
206_A	430_N	0.724	0.66
307_F	347_A	0.724	0.66
294_V	301_V	0.719	0.66
103_A	155_T	0.719	0.66
278_I	342_S	0.718	0.66
402_V	416_I	0.718	0.66
134_P	166_G	0.716	0.66
65_A	68_F	0.715	0.65
220_G	333_E	0.714	0.65
408_I	452_S	0.710	0.65
66_L	366_I	0.710	0.65
185_V	230_Y	0.709	0.65
392_E	507_L	0.709	0.65
132_V	136_A	0.707	0.65
205_D	425_E	0.700	0.64
258_G	296_F	0.700	0.64
163_F	180_I	0.700	0.64
59_V	359_L	0.699	0.64
195_D	200_S	0.699	0.64
270_G	273_I	0.697	0.64
441_N	497_F	0.697	0.64
128_I	151_G	0.696	0.63
150_S	410_T	0.695	0.63
153_G	264_S	0.695	0.63
226_S	495_G	0.693	0.63
262_L	289_A	0.693	0.63
396_V	400_A	0.693	0.63
112_T	115_F	0.691	0.63
155_T	282_I	0.690	0.63
216_F	229_A	0.686	0.62
204_Q	431_S	0.686	0.62
189_N	195_D	0.685	0.62
185_V	445_L	0.683	0.62
196_T	201_A	0.683	0.62
132_V	135_A	0.681	0.62
154_T	410_T	0.677	0.61
211_V	215_R	0.677	0.61
414_I	449_F	0.676	0.61
198_I	208_I	0.676	0.61
433_R	500_S	0.676	0.61
169_L	234_G	0.675	0.61
200_S	211_V	0.675	0.61
104_G	346_G	0.674	0.61
198_I	202_V	0.673	0.61
121_W	125_A	0.673	0.61
41_V	254_V	0.671	0.61
447_Y	490_G	0.670	0.60
413_E	438_L	0.668	0.60
263_L	378_D	0.667	0.60
42_W	57_G	0.667	0.60
66_L	84_I	0.665	0.60
40_V	402_V	0.661	0.59
219_A	440_A	0.661	0.59
100_W	185_V	0.661	0.59
161_L	358_L	0.660	0.59
298_L	347_A	0.659	0.59
232_G	254_V	0.658	0.59
388_V	504_G	0.657	0.59
172_N	486_F	0.657	0.59
485_P	488_F	0.655	0.59
437_I	441_N	0.654	0.59
246_A	339_V	0.654	0.59
177_F	478_V	0.653	0.59
141_A	154_T	0.653	0.59
143_L	266_A	0.653	0.59
181_L	452_S	0.652	0.58
230_Y	343_L	0.651	0.58
495_G	498_V	0.651	0.58
360_I	364_A	0.650	0.58
37_V	270_G	0.649	0.58
240_I	267_T	0.648	0.58
272_A	289_A	0.648	0.58
52_V	57_G	0.647	0.58
96_A	153_G	0.647	0.58
58_L	100_W	0.646	0.58
100_W	354_I	0.646	0.58
403_N	446_G	0.646	0.58
138_F	153_G	0.645	0.58
277_H	280_E	0.644	0.57
333_E	337_S	0.644	0.57
56_T	415_A	0.643	0.57
378_D	426_R	0.643	0.57
479_D	484_V	0.643	0.57
340_G	344_Y	0.642	0.57
106_F	282_I	0.642	0.57
152_Y	453_G	0.641	0.57
71_F	143_L	0.641	0.57
384_V	387_T	0.641	0.57
63_L	301_V	0.640	0.57
31_A	68_F	0.639	0.57
403_N	409_N	0.639	0.57
391_A	395_M	0.638	0.57
66_L	69_G	0.637	0.57
217_K	221_V	0.636	0.57
444_A	494_V	0.633	0.56
459_Y	477_V	0.633	0.56
232_G	508_E	0.632	0.56
66_L	70_M	0.631	0.56
82_N	306_V	0.631	0.56
455_V	459_Y	0.631	0.56
197_T	211_V	0.631	0.56
62_M	84_I	0.630	0.56
152_Y	446_G	0.630	0.56
261_H	265_M	0.629	0.56
378_D	495_G	0.629	0.56
214_S	436_N	0.628	0.56
355_V	419_Y	0.628	0.56
447_Y	458_G	0.627	0.55
61_G	65_A	0.627	0.55
284_W	288_V	0.626	0.55
185_V	490_G	0.625	0.55
361_V	417_A	0.624	0.55
27_G	30_L	0.623	0.55
182_S	487_V	0.623	0.55
166_G	169_L	0.622	0.55
142_G	305_L	0.621	0.55
117_S	255_G	0.620	0.55
139_I	146_T	0.618	0.54
392_E	395_M	0.618	0.54
347_A	355_V	0.617	0.54
35_P	261_H	0.617	0.54
263_L	307_F	0.616	0.54
459_Y	483_V	0.615	0.54
276_R	284_W	0.615	0.54
156_V	461_A	0.615	0.54
399_T	416_I	0.614	0.54
36_L	39_F	0.614	0.54
367_M	370_G	0.614	0.54
228_A	388_V	0.613	0.54
116_V	360_I	0.612	0.54
206_A	405_M	0.610	0.53
186_F	504_G	0.609	0.53
303_E	306_V	0.609	0.53
146_T	195_D	0.609	0.53
98_V	116_V	0.609	0.53
401_F	405_M	0.609	0.53
137_T	141_A	0.609	0.53
153_G	410_T	0.608	0.53
248_A	333_E	0.607	0.53
78_A	378_D	0.607	0.53
198_I	416_I	0.607	0.53
223_A	489_H	0.606	0.53
214_S	508_E	0.605	0.53
335_V	339_V	0.603	0.53
129_G	136_A	0.602	0.52
294_V	303_E	0.602	0.52
156_V	160_A	0.601	0.52
166_G	171_A	0.601	0.52
71_F	287_V	0.601	0.52
108_E	261_H	0.600	0.52
285_G	414_I	0.600	0.52
233_A	486_F	0.599	0.52
37_V	383_S	0.599	0.52
142_G	227_F	0.599	0.52
230_Y	489_H	0.598	0.52
35_P	372_G	0.598	0.52
295_V	298_L	0.597	0.52
229_A	232_G	0.596	0.52
113_G	262_L	0.596	0.52
156_V	457_V	0.596	0.52
153_G	409_N	0.596	0.52
38_F	42_W	0.594	0.52
271_T	281_A	0.594	0.52
202_V	494_V	0.594	0.52
34_F	38_F	0.593	0.51
103_A	282_I	0.592	0.51
429_I	508_E	0.592	0.51
214_S	506_G	0.591	0.51
381_L	423_L	0.590	0.51
88_M	280_E	0.589	0.51
301_V	305_L	0.587	0.51
94_A	97_I	0.586	0.51
338_S	341_G	0.586	0.51
395_M	437_I	0.585	0.50
39_F	489_H	0.584	0.50
403_N	412_A	0.584	0.50
81_A	116_V	0.584	0.50
66_L	80_Y	0.583	0.50
62_M	66_L	0.582	0.50
421_A	431_S	0.582	0.50
253_N	291_V	0.582	0.50
134_P	179_A	0.582	0.50
407_T	446_G	0.581	0.50
108_E	304_M	0.581	0.50
392_E	437_I	0.581	0.50
119_L	195_D	0.581	0.50
339_V	415_A	0.580	0.50
478_V	484_V	0.578	0.50
166_G	172_N	0.575	0.49
357_V	411_A	0.572	0.49
256_P	296_F	0.572	0.49
185_V	447_Y	0.572	0.49
351_F	354_I	0.572	0.49
179_A	222_A	0.571	0.49
54_D	352_P	0.571	0.49
31_A	34_F	0.571	0.49
175_L	182_S	0.569	0.49
249_I	336_T	0.569	0.49
409_N	489_H	0.568	0.48
333_E	344_Y	0.567	0.48
59_V	361_V	0.566	0.48
32_S	50_L	0.566	0.48
85_F	94_A	0.566	0.48
228_A	231_L	0.565	0.48
190_L	212_V	0.565	0.48
154_T	168_A	0.564	0.48
433_R	437_I	0.564	0.48
135_A	180_I	0.563	0.48
145_A	192_P	0.563	0.48
264_S	272_A	0.562	0.48
44_I	47_S	0.562	0.48
109_T	112_T	0.560	0.47
219_A	443_S	0.559	0.47
138_F	264_S	0.558	0.47
503_T	507_L	0.558	0.47
32_S	375_A	0.558	0.47
97_I	358_L	0.554	0.47
128_I	143_L	0.553	0.47
152_Y	493_L	0.553	0.47
188_D	194_S	0.551	0.46
334_G	337_S	0.546	0.46
162_F	456_L	0.546	0.46
62_M	490_G	0.545	0.46
208_I	456_L	0.544	0.46
79_G	306_V	0.544	0.46
211_V	443_S	0.541	0.45
46_Q	52_V	0.541	0.45
218_Y	497_F	0.541	0.45
232_G	236_V	0.541	0.45
165_A	168_A	0.541	0.45
115_F	265_M	0.539	0.45
69_G	394_T	0.539	0.45
163_F	461_A	0.539	0.45
83_T	356_L	0.538	0.45
26_Y	374_R	0.536	0.45
287_V	428_N	0.536	0.45
269_I	273_I	0.536	0.45
88_M	360_I	0.535	0.44
138_F	226_S	0.535	0.44
151_G	154_T	0.535	0.44
152_Y	454_G	0.535	0.44
70_M	73_V	0.534	0.44
126_A	225_L	0.533	0.44
118_G	504_G	0.532	0.44
177_F	458_G	0.530	0.44
123_A	192_P	0.530	0.44
161_L	395_M	0.530	0.44
244_G	249_I	0.529	0.44
201_A	204_Q	0.528	0.44
50_L	301_V	0.527	0.44
163_F	172_N	0.526	0.43
33_A	36_L	0.525	0.43
245_D	341_G	0.525	0.43
39_F	65_A	0.525	0.43
116_V	285_G	0.525	0.43
58_L	347_A	0.524	0.43
500_S	505_F	0.524	0.43
380_L	398_G	0.524	0.43
376_I	386_T	0.523	0.43
355_V	358_L	0.523	0.43
123_A	164_P	0.521	0.43
265_M	282_I	0.521	0.43
70_M	80_Y	0.520	0.43
196_T	454_G	0.520	0.43
211_V	436_N	0.520	0.43
339_V	362_A	0.520	0.43
27_G	72_L	0.519	0.43
224_V	300_D	0.519	0.43
128_I	300_D	0.519	0.43
96_A	453_G	0.518	0.42
178_G	415_A	0.518	0.42
133_F	173_P	0.517	0.42
403_N	452_S	0.516	0.42
263_L	295_V	0.516	0.42
116_V	120_V	0.515	0.42
70_M	343_L	0.515	0.42
69_G	271_T	0.513	0.42
115_F	192_P	0.513	0.42
207_D	213_A	0.512	0.42
242_V	495_G	0.512	0.42
156_V	273_I	0.512	0.42
153_G	411_A	0.511	0.42
285_G	460_A	0.510	0.42
78_A	81_A	0.510	0.42
390_R	502_L	0.510	0.42
147_G	193_V	0.509	0.41
407_T	452_S	0.509	0.41
398_G	435_A	0.508	0.41
412_A	477_V	0.508	0.41
230_Y	488_F	0.506	0.41
304_M	307_F	0.506	0.41
231_L	495_G	0.505	0.41
105_M	112_T	0.505	0.41
245_D	248_A	0.504	0.41
37_V	171_A	0.504	0.41
70_M	76_S	0.503	0.41
86_A	267_T	0.502	0.41
171_A	237_M	0.502	0.41
333_E	336_T	0.501	0.40
34_F	257_T	0.501	0.40
109_T	351_F	0.501	0.40
80_Y	370_G	0.501	0.40
54_D	408_I	0.500	0.40

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4f35D	2	0.7735	99.9	0.826	Contact Map
4r1iA	2	0.858	99.9	0.849	Contact Map
4r0cA	3	0.453	99.7	0.872	Contact Map
3qe7A	2	0.6641	70.7	0.971	Contact Map
4ikvA	1	0.7658	46.9	0.975	Contact Map
4pd6A	3	0.4069	45.9	0.975	Contact Map
4eneA	2	0.6353	31.1	0.977	Contact Map
2jlnA	1	0.7774	22.4	0.979	Contact Map
2kncA	1	0.0979	21	0.979	Contact Map
3nd0A	2	0.6296	20	0.979	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0131 seconds.