GREMLIN Database
Q9HRY8 - Acetyl-CoA synthetase
UniProt: Q9HRY8 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 656 (505)
Sequences: 59503 (42198)
Seq/√Len: 1877.8

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
272_P289_V4.1101.00
552_H595_H3.2601.00
477_L515_A3.0311.00
493_G496_R3.0181.00
132_N168_K2.9291.00
457_D480_R2.9051.00
291_T488_R2.8991.00
191_D277_Y2.8791.00
143_I171_A2.8641.00
147_D195_S2.8061.00
150_G194_C2.7691.00
128_H168_K2.7371.00
516_Q524_F2.7111.00
111_I339_T2.6921.00
314_R339_T2.5481.00
108_V121_Q2.4861.00
193_E492_S2.4841.00
148_T174_V2.4731.00
95_D128_H2.4561.00
137_A141_R2.4451.00
104_T107_H2.4031.00
476_Y510_N2.3901.00
461_V478_V2.2991.00
557_Q617_K2.2901.00
474_R514_W2.2711.00
162_I198_F2.2291.00
97_H104_T2.2191.00
549_L574_A2.1811.00
550_I558_A2.1811.00
191_D493_G2.1691.00
130_Q161_S2.1591.00
357_Q361_D2.1551.00
534_N539_K2.1321.00
459_D467_S2.1291.00
187_T284_T2.0891.00
128_H132_N2.0861.00
195_S227_D2.0731.00
268_A271_D2.0661.00
462_D466_T2.0651.00
551_D599_A2.0591.00
518_D524_F2.0481.00
496_R499_E2.0301.00
112_W157_P2.0261.00
478_V510_N2.0181.00
145_E271_D2.0171.00
313_D394_R2.0071.00
624_V627_A1.9731.00
186_A190_A1.9701.00
134_V161_S1.9501.00
106_N125_H1.9441.00
88_N96_R1.9391.00
146_G271_D1.9381.00
573_I610_V1.9331.00
531_D625_R1.9311.00
111_I121_Q1.9211.00
494_E498_L1.9191.00
166_I171_A1.8771.00
313_D365_T1.8641.00
448_T524_F1.8581.00
139_A169_I1.8551.00
405_P409_R1.8381.00
518_D522_D1.8221.00
111_I362_H1.8151.00
363_G392_S1.8011.00
186_A222_R1.7821.00
474_R526_H1.7791.00
131_A168_K1.7741.00
144_G147_D1.7561.00
125_H129_Q1.7481.00
141_R228_H1.7101.00
96_R103_G1.7101.00
341_V364_I1.7091.00
556_T579_A1.6991.00
471_A517_M1.6861.00
546_E560_V1.6821.00
291_T294_G1.6801.00
627_A630_S1.6711.00
517_M523_W1.6691.00
154_P200_G1.6611.00
459_D478_V1.6571.00
516_Q526_H1.6451.00
535_V540_V1.6431.00
272_P488_R1.6211.00
167_F273_C1.6181.00
554_A591_E1.6181.00
354_R357_Q1.6071.00
495_D499_E1.6071.00
98_A128_H1.6021.00
123_T126_D1.6011.00
95_D168_K1.5971.00
160_Q330_L1.5881.00
97_H103_G1.5871.00
550_I557_Q1.5851.00
105_R125_H1.5701.00
577_I615_L1.5591.00
502_W510_N1.5391.00
137_A254_A1.5371.00
548_A599_A1.5351.00
435_F479_A1.5271.00
150_G176_I1.5231.00
593_R609_V1.5221.00
108_V111_I1.5211.00
304_H336_F1.5181.00
576_V611_F1.5181.00
561_V575_Y1.5111.00
275_L491_W1.5091.00
560_V574_A1.5061.00
460_I515_A1.4961.00
436_L458_I1.4931.00
421_P439_L1.4921.00
108_V339_T1.4911.00
360_E388_H1.4901.00
122_Q161_S1.4881.00
148_T172_I1.4841.00
575_Y628_V1.4761.00
122_Q157_P1.4711.00
270_S293_A1.4691.00
289_V491_W1.4641.00
294_G432_F1.4541.00
554_A582_A1.4511.00
146_G488_R1.4471.00
590_A594_D1.4461.00
333_N338_G1.4451.00
544_E604_F1.4441.00
289_V489_R1.4431.00
578_L611_F1.4411.00
305_F454_L1.4411.00
132_N136_N1.4411.00
409_R413_D1.4361.00
182_V218_D1.4361.00
564_P570_E1.4311.00
149_V171_A1.4091.00
148_T275_L1.4071.00
369_V374_I1.4061.00
107_H312_G1.4011.00
189_I194_C1.4001.00
458_I479_A1.4001.00
487_T501_Y1.3911.00
149_V166_I1.3911.00
351_A354_R1.3761.00
316_C364_I1.3731.00
576_V609_V1.3721.00
109_A127_L1.3711.00
358_L362_H1.3661.00
128_H262_F1.3621.00
502_W506_E1.3541.00
112_W120_R1.3521.00
515_A525_L1.3521.00
445_K520_D1.3511.00
372_T401_E1.3491.00
500_A509_W1.3481.00
192_A277_Y1.3421.00
174_V192_A1.3411.00
595_H599_A1.3371.00
150_G189_I1.3261.00
310_R313_D1.3241.00
514_W529_A1.3231.00
143_I147_D1.3211.00
343_Y358_L1.3201.00
172_I272_P1.3191.00
428_G509_W1.3181.00
314_R341_V1.3171.00
474_R516_Q1.3021.00
140_E258_Q1.2901.00
143_I149_V1.2891.00
575_Y612_V1.2841.00
201_D233_D1.2811.00
269_A293_A1.2751.00
480_R508_V1.2741.00
130_Q133_R1.2721.00
89_V92_N1.2701.00
314_R364_I1.2681.00
196_V228_H1.2631.00
618_T624_V1.2621.00
469_R473_E1.2601.00
313_D366_Q1.2581.00
277_Y287_G1.2581.00
594_D598_D1.2531.00
451_G522_D1.2511.00
250_W253_D1.2461.00
289_V488_R1.2441.00
533_I542_P1.2441.00
191_D492_S1.2401.00
151_L162_I1.2361.00
438_P522_D1.2341.00
562_G570_E1.2321.00
367_F393_L1.2221.00
374_I396_L1.2191.00
293_A484_P1.2171.00
325_M368_G1.2161.00
191_D284_T1.2151.00
182_V186_A1.2131.00
187_T191_D1.2131.00
462_D468_V1.2121.00
267_M271_D1.2081.00
597_G602_K1.2001.00
113_E344_E1.2001.00
134_V198_F1.1991.00
88_N92_N1.1981.00
398_S403_W1.1971.00
270_S291_T1.1901.00
379_D410_W1.1881.00
538_R603_P1.1881.00
121_Q362_H1.1811.00
597_G605_R1.1801.00
159_V321_I1.1761.00
120_R157_P1.1731.00
164_Y334_H1.1691.00
148_T491_W1.1651.00
129_Q133_R1.1631.00
230_I234_R1.1621.00
190_A284_T1.1561.00
366_Q395_I1.1501.00
165_G169_I1.1491.00
143_I196_V1.1451.00
134_V165_G1.1391.00
557_Q577_I1.1371.00
463_D529_A1.1361.00
574_A609_V1.1321.00
563_V573_I1.1321.00
445_K522_D1.1311.00
565_D571_A1.1281.00
137_A140_E1.1271.00
573_I608_E1.1221.00
278_S288_I1.1201.00
359_I392_S1.1171.00
571_A607_R1.1171.00
122_Q130_Q1.1161.00
126_D129_Q1.1161.00
404_D407_S1.1121.00
130_Q158_E1.0991.00
575_Y629_A1.0981.00
95_D132_N1.0941.00
113_E120_R1.0881.00
353_D380_H1.0881.00
152_Y185_T1.0871.00
595_H598_D1.0831.00
459_D508_V1.0821.00
456_M485_S1.0811.00
153_M232_Y1.0801.00
477_L525_L1.0801.00
290_H294_G1.0791.00
548_A551_D1.0761.00
452_P458_I1.0751.00
275_L287_G1.0751.00
109_A124_Y1.0741.00
438_P448_T1.0731.00
176_I185_T1.0731.00
127_L164_Y1.0721.00
612_V615_L1.0721.00
543_A547_G1.0681.00
182_V215_T1.0631.00
591_E594_D1.0571.00
612_V631_A1.0561.00
478_V502_W1.0531.00
127_L161_S1.0531.00
375_R407_S1.0521.00
571_A608_E1.0451.00
288_I487_T1.0441.00
411_F415_V1.0431.00
476_Y529_A1.0431.00
111_I341_V1.0401.00
341_V358_L1.0391.00
496_R500_A1.0381.00
575_Y632_Y1.0291.00
200_G203_F1.0241.00
436_L523_W1.0231.00
559_A615_L1.0221.00
147_D171_A1.0211.00
314_R365_T1.0201.00
593_R597_G1.0151.00
552_H592_L1.0141.00
319_S325_M1.0041.00
110_C160_Q1.0021.00
626_R630_S0.9991.00
479_A511_H0.9951.00
313_D338_G0.9921.00
135_A168_K0.9901.00
122_Q127_L0.9861.00
315_F333_N0.9831.00
564_P567_T0.9821.00
410_W414_H0.9801.00
294_G486_M0.9801.00
552_H591_E0.9771.00
480_R506_E0.9731.00
596_V605_R0.9731.00
535_V562_G0.9711.00
148_T193_E0.9681.00
187_T277_Y0.9681.00
416_G420_T0.9671.00
180_F188_R0.9661.00
183_E186_A0.9641.00
341_V362_H0.9631.00
99_S103_G0.9631.00
563_V608_E0.9631.00
129_Q260_P0.9571.00
183_E599_A0.9561.00
184_A604_F0.9541.00
279_S620_S0.9531.00
627_A631_A0.9521.00
532_A541_G0.9521.00
449_L525_L0.9511.00
551_D595_H0.9511.00
581_A584_P0.9501.00
107_H339_T0.9461.00
458_I523_W0.9451.00
131_A165_G0.9421.00
556_T577_I0.9351.00
585_S591_E0.9311.00
120_R130_Q0.9301.00
276_L429_T0.9291.00
136_N259_S0.9281.00
91_H267_M0.9281.00
378_R410_W0.9281.00
546_E625_R0.9261.00
201_D234_R0.9221.00
136_N139_A0.9211.00
134_V162_I0.9171.00
615_L623_L0.9121.00
150_G197_V0.9111.00
94_V98_A0.9091.00
478_V508_V0.9061.00
548_A596_V0.9061.00
183_E187_T0.9021.00
187_T493_G0.8991.00
465_G469_R0.8981.00
406_E410_W0.8971.00
316_C343_Y0.8971.00
138_L166_I0.8951.00
403_W408_W0.8941.00
110_C157_P0.8941.00
108_V123_T0.8941.00
514_W527_G0.8931.00
96_R99_S0.8921.00
95_D99_S0.8911.00
468_V473_E0.8891.00
594_D597_G0.8891.00
157_P161_S0.8871.00
128_H131_A0.8851.00
472_N519_A0.8831.00
591_E595_H0.8771.00
138_L198_F0.8771.00
536_A568_T0.8761.00
139_A144_G0.8761.00
531_D543_A0.8741.00
143_I169_I0.8741.00
503_S506_E0.8721.00
410_W413_D0.8711.00
448_T522_D0.8711.00
397_G425_I0.8691.00
127_L131_A0.8681.00
458_I477_L0.8631.00
126_D130_Q0.8631.00
368_G434_C0.8631.00
187_T190_A0.8621.00
290_H487_T0.8601.00
136_N263_E0.8571.00
92_N96_R0.8561.00
601_G604_F0.8531.00
463_D476_Y0.8531.00
465_G478_V0.8511.00
460_I523_W0.8511.00
375_R404_D0.8491.00
177_F322_G0.8471.00
333_N340_I0.8461.00
153_M156_V0.8441.00
374_I411_F0.8411.00
136_N258_Q0.8381.00
267_M292_H0.8381.00
300_A335_A0.8361.00
533_I572_A0.8321.00
273_C295_A0.8311.00
324_M428_G0.8311.00
154_P202_G0.8311.00
91_H292_H0.8301.00
93_T301_K0.8291.00
139_A263_E0.8231.00
114_G120_R0.8181.00
460_I468_V0.8171.00
495_D498_L0.8141.00
462_D473_E0.8141.00
431_V509_W0.8141.00
360_E389_D0.8131.00
111_I314_R0.8111.00
163_L173_A0.8071.00
592_L609_V0.8021.00
395_I423_I0.8021.00
139_A262_F0.8011.00
137_A258_Q0.8011.00
573_I632_Y0.7961.00
174_V194_C0.7951.00
190_A225_H0.7931.00
91_H167_F0.7911.00
107_H311_P0.7891.00
445_K518_D0.7891.00
151_L173_A0.7891.00
120_R158_E0.7861.00
290_H432_F0.7861.00
531_D546_E0.7851.00
459_D480_R0.7841.00
150_G174_V0.7821.00
160_Q342_M0.7821.00
483_S486_M0.7821.00
314_R363_G0.7811.00
92_N95_D0.7811.00
108_V112_W0.7801.00
166_I173_A0.7791.00
431_V435_F0.7781.00
161_S165_G0.7771.00
197_V216_L0.7751.00
201_D231_V0.7751.00
139_A265_H0.7731.00
406_E409_R0.7721.00
94_V128_H0.7701.00
630_S633_T0.7701.00
375_R410_W0.7691.00
554_A579_A0.7671.00
353_D357_Q0.7661.00
431_V486_M0.7661.00
158_E161_S0.7621.00
199_T231_V0.7611.00
357_Q360_E0.7591.00
480_R507_D0.7591.00
578_L584_P0.7591.00
298_Q455_G0.7581.00
578_L582_A0.7551.00
161_S251_W0.7521.00
350_P373_A0.7481.00
425_I434_C0.7471.00
144_G195_S0.7461.00
93_T97_H0.7461.00
183_E284_T0.7441.00
133_R260_P0.7421.00
141_R196_V0.7421.00
461_V467_S0.7401.00
182_V222_R0.7401.00
563_V571_A0.7391.00
586_A590_A0.7391.00
94_V164_Y0.7381.00
359_I364_I0.7371.00
575_Y631_A0.7361.00
370_S373_A0.7351.00
127_L160_Q0.7341.00
136_N260_P0.7341.00
89_V292_H0.7331.00
318_V373_A0.7311.00
173_A327_P0.7301.00
365_T394_R0.7291.00
274_M290_H0.7291.00
543_A546_E0.7271.00
134_V138_L0.7271.00
388_H391_S0.7271.00
324_M433_G0.7261.00
133_R137_A0.7251.00
376_A567_T0.7241.00
345_G349_H0.7231.00
357_Q388_H0.7231.00
502_W508_V0.7221.00
97_H337_A0.7221.00
328_W368_G0.7211.00
493_G497_Y0.7191.00
559_A623_L0.7181.00
158_E200_G0.7181.00
135_A169_I0.7171.00
458_I515_A0.7161.00
309_Q366_Q0.7131.00
272_P291_T0.7131.00
316_C358_L0.7131.00
273_C292_H0.7131.00
299_P433_G0.7131.00
106_N123_T0.7131.00
395_I421_P0.7111.00
91_H95_D0.7111.00
431_V479_A0.7101.00
474_R529_A0.7101.00
193_E225_H0.7091.00
99_S128_H0.7091.00
382_D410_W0.7091.00
375_R406_E0.7081.00
503_S507_D0.7071.00
98_A105_R0.7061.00
150_G192_A0.7051.00
590_A593_R0.7011.00
121_Q339_T0.7011.00
310_R394_R0.7001.00
374_I398_S0.7001.00
199_T203_F0.7001.00
325_M399_T0.6981.00
152_Y203_F0.6971.00
104_T125_H0.6971.00
576_V592_L0.6971.00
471_A519_A0.6961.00
253_D256_A0.6951.00
87_L293_A0.6941.00
368_G399_T0.6931.00
375_R379_D0.6931.00
104_T311_P0.6931.00
153_M159_V0.6931.00
162_I166_I0.6931.00
593_R605_R0.6911.00
329_S368_G0.6911.00
284_T493_G0.6901.00
360_E391_S0.6901.00
359_I367_F0.6901.00
136_N262_F0.6881.00
423_I439_L0.6871.00
510_N529_A0.6871.00
501_Y510_N0.6861.00
304_H332_G0.6841.00
299_P328_W0.6831.00
554_A578_L0.6821.00
515_A523_W0.6811.00
145_E265_H0.6801.00
188_R287_G0.6801.00
477_L523_W0.6791.00
368_G425_I0.6751.00
231_V235_L0.6751.00
149_V196_V0.6741.00
166_I169_I0.6741.00
148_T492_S0.6741.00
163_L327_P0.6741.00
93_T335_A0.6741.00
93_T296_L0.6731.00
199_T229_T0.6711.00
144_G171_A0.6701.00
596_V600_H0.6681.00
145_E267_M0.6671.00
577_I614_D0.6651.00
453_G456_M0.6631.00
393_L396_L0.6611.00
317_W329_S0.6601.00
535_V572_A0.6581.00
469_R472_N0.6571.00
153_M200_G0.6561.00
515_A526_H0.6561.00
139_A264_T0.6551.00
163_L330_L0.6541.00
318_V370_S0.6541.00
460_I517_M0.6541.00
205_R215_T0.6541.00
465_G502_W0.6531.00
184_A544_E0.6531.00
134_V251_W0.6531.00
343_Y355_F0.6501.00
396_L411_F0.6491.00
298_Q484_P0.6491.00
312_G365_T0.6481.00
339_T362_H0.6471.00
153_M162_I0.6451.00
468_V471_A0.6451.00
301_K305_F0.6441.00
270_S488_R0.6431.00
135_A165_G0.6421.00
152_Y197_V0.6421.00
555_V576_V0.6411.00
493_G499_E0.6411.00
140_E257_T0.6411.00
403_W422_I0.6411.00
549_L558_A0.6411.00
196_V230_I0.6401.00
426_S435_F0.6401.00
381_G385_V0.6401.00
497_Y501_Y0.6391.00
134_V137_A0.6341.00
354_R358_L0.6331.00
328_W434_C0.6321.00
156_V200_G0.6311.00
138_L196_V0.6301.00
548_A595_H0.6291.00
137_A255_V0.6291.00
164_Y331_I0.6291.00
542_P560_V0.6281.00
412_Y421_P0.6271.00
407_S410_W0.6241.00
132_N262_F0.6241.00
556_T580_D0.6231.00
559_A628_V0.6221.00
367_F396_L0.6221.00
108_V314_R0.6221.00
415_V420_T0.6221.00
428_G431_V0.6211.00
136_N261_T0.6211.00
112_W344_E0.6211.00
386_A414_H0.6201.00
561_V632_Y0.6201.00
316_C359_I0.6181.00
215_T218_D0.6161.00
104_T337_A0.6161.00
175_P276_L0.6121.00
315_F366_Q0.6111.00
548_A600_H0.6101.00
424_N447_C0.6101.00
402_P525_L0.6101.00
122_Q126_D0.6101.00
549_L596_V0.6101.00
309_Q338_G0.6091.00
575_Y610_V0.6091.00
163_L167_F0.6091.00
602_K605_R0.6091.00
323_W538_R0.6081.00
498_L503_S0.6071.00
142_G171_A0.6071.00
580_D583_T0.6071.00
486_M509_W0.6061.00
593_R596_V0.6051.00
457_D508_V0.6051.00
561_V629_A0.6031.00
535_V570_E0.6001.00
283_G541_G0.5991.00
299_P434_C0.5981.00
317_W340_I0.5971.00
199_T216_L0.5971.00
130_Q157_P0.5941.00
172_I275_L0.5911.00
110_C340_I0.5911.00
302_E306_G0.5901.00
180_F322_G0.5901.00
204_L231_V0.5881.00
309_Q313_D0.5881.00
91_H168_K0.5881.00
143_I195_S0.5871.00
545_V572_A0.5861.00
358_L361_D0.5861.00
610_V631_A0.5861.00
630_S634_G0.5851.00
489_R494_E0.5851.00
360_E392_S0.5841.00
535_V607_R0.5841.00
301_K304_H0.5831.00
547_G551_D0.5831.00
218_D221_E0.5821.00
376_A379_D0.5821.00
564_P633_T0.5791.00
224_G227_D0.5791.00
317_W342_M0.5791.00
465_G468_V0.5781.00
153_M198_F0.5781.00
412_Y442_E0.5761.00
262_F265_H0.5741.00
317_W326_G0.5721.00
154_P345_G0.5711.00
319_S368_G0.5701.00
193_E491_W0.5701.00
191_D491_W0.5691.00
180_F185_T0.5681.00
546_E574_A0.5671.00
172_I491_W0.5661.00
586_A611_F0.5651.00
274_M327_P0.5651.00
460_I477_L0.5651.00
464_D469_R0.5641.00
133_R136_N0.5641.00
294_G488_R0.5631.00
217_N220_I0.5631.00
563_V630_S0.5631.00
465_G510_N0.5631.00
174_V277_Y0.5611.00
141_R254_A0.5611.00
461_V508_V0.5611.00
610_V635_A0.5581.00
124_Y334_H0.5571.00
95_D264_T0.5571.00
411_F422_I0.5561.00
530_D570_E0.5561.00
130_Q255_V0.5561.00
556_T578_L0.5551.00
163_L331_I0.5551.00
449_L515_A0.5551.00
425_I437_M0.5551.00
231_V234_R0.5541.00
565_D569_G0.5541.00
399_T434_C0.5531.00
275_L289_V0.5521.00
92_N266_S0.5521.00
565_D568_T0.5521.00
355_F359_I0.5521.00
457_D506_E0.5521.00
89_V267_M0.5521.00
552_H555_V0.5501.00
90_A167_F0.5501.00
148_T194_C0.5501.00
153_M199_T0.5491.00
299_P303_I0.5481.00
306_G439_L0.5481.00
274_M295_A0.5471.00
555_V558_A0.5471.00
557_Q615_L0.5471.00
318_V369_V0.5461.00
608_E611_F0.5461.00
132_N139_A0.5451.00
479_A486_M0.5451.00
325_M433_G0.5451.00
110_C122_Q0.5431.00
403_W424_N0.5431.00
398_S422_I0.5431.00
316_C355_F0.5401.00
436_L449_L0.5391.00
306_G454_L0.5391.00
409_R412_Y0.5391.00
113_E361_D0.5391.00
382_D387_G0.5391.00
98_A103_G0.5371.00
355_F373_A0.5341.00
461_V465_G0.5331.00
472_N516_Q0.5331.00
110_C127_L0.5331.00
350_P355_F0.5331.00
199_T204_L0.5331.00
435_F456_M0.5321.00
183_E222_R0.5321.00
179_G345_G0.5301.00
408_W422_I0.5291.00
356_W381_G0.5291.00
154_P203_F0.5281.00
320_D323_W0.5271.00
359_I363_G0.5261.00
125_H128_H0.5251.00
220_I223_A0.5241.00
303_I328_W0.5231.00
198_F230_I0.5231.00
195_S228_H0.5231.00
344_E354_R0.5231.00
131_A134_V0.5231.00
138_L171_A0.5221.00
111_I114_G0.5221.00
192_A275_L0.5221.00
259_S263_E0.5221.00
487_T500_A0.5201.00
131_A135_A0.5201.00
133_R259_S0.5201.00
315_F338_G0.5191.00
314_R317_W0.5191.00
156_V232_Y0.5181.00
328_W425_I0.5171.00
288_I429_T0.5161.00
258_Q262_F0.5151.00
124_Y338_G0.5141.00
378_R407_S0.5131.00
160_Q334_H0.5131.00
176_I189_I0.5131.00
197_V229_T0.5111.00
228_H231_V0.5111.00
95_D262_F0.5081.00
564_P568_T0.5081.00
428_G511_H0.5081.00
260_P263_E0.5081.00
365_T392_S0.5061.00
600_H604_F0.5061.00
356_W390_L0.5061.00
559_A625_R0.5061.00
258_Q261_T0.5051.00
570_E629_A0.5031.00
325_M425_I0.5031.00
300_A332_G0.5031.00
152_Y178_S0.5031.00
578_L583_T0.5021.00
152_Y176_I0.5011.00
151_L166_I0.5001.00
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
2vsqA 1 0.9101 100 0.168 Contact Map
1pg4A 1 0.9573 100 0.177 Contact Map
1ry2A 1 0.9177 100 0.18 Contact Map
4wd1A 1 0.9527 100 0.181 Contact Map
3tsyA 2 0.6723 100 0.205 Contact Map
3etcA 2 0.7973 100 0.21 Contact Map
3g7sA 2 0.7454 100 0.224 Contact Map
1amuA 1 0.7607 100 0.23 Contact Map
1mdbA 1 0.811 100 0.23 Contact Map
3ni2A 1 0.7851 100 0.235 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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