Q9HRR8 - HALSA - GREMLIN Contacts

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Q9HRR8 - Aminopeptidase

UniProt:	Q9HRR8	Sequences: MTDWIGDTFTSTTGWTHLQRLVDTPTRMAGSDGEREAAAATRDALAQHADDAWLDTFPVQGWTRGDSAIETPADTTADTIALPRSPAGTAAGEFVDLSYGLPGDFEDADLDGAIVMVAADVPDWYDRHLHRREKYAHAVAAGAAGFVYMNHVAGCLPATGSVGTGDDPIGEIPAVGVSTETGTRLSRRFEHDTVTLTVDADTHDATSQNVHATLGPDTDAELLVTSHVDAHDITDGAMDNGAGTAMAVELARILAARESALDTRVHFVCFGAEEVGLVGSHHDAAQRDLDDVRAVLNLDGVVRERTLKLYTHRFDALGDAANAVSDTFAHPITVAPALNPHSDHWAYVKHGVPGYHATSDAAGGRGWGHTSADTLDKLELRTFREHAILLAALAARLADDGFAVAHASEADVAAGLTDAGLAEGMQITGDWPY	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	433 (389)
Sequences:	4045 (3030)
Seq/√Len:	153.6

BACSU - BSAP
HALSA - Q9HRR8 Q9HNP7
SULSO - Q7LXL7

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
44_A	47_Q	4.001	1.00
42_R	46_A	3.881	1.00
367_W	372_A	3.756	1.00
42_R	54_L	3.703	1.00
110_L	115_V	3.584	1.00
117_V	146_F	3.448	1.00
217_D	262_D	3.358	1.00
45_L	269_C	3.327	1.00
224_V	394_A	3.122	1.00
91_A	195_T	3.067	1.00
93_E	113_A	3.064	1.00
249_E	252_R	2.882	1.00
54_L	208_Q	2.822	1.00
56_T	206_T	2.778	1.00
97_L	117_V	2.651	1.00
294_A	397_L	2.646	1.00
114_I	145_G	2.641	1.00
17_H	40_A	2.636	1.00
225_T	295_V	2.561	1.00
282_H	286_Q	2.483	1.00
38_A	210_V	2.388	1.00
213_T	266_H	2.385	1.00
92_G	144_A	2.371	1.00
216_P	262_D	2.347	1.00
34_E	271_G	2.323	1.00
57_F	271_G	2.283	1.00
32_D	36_E	2.238	1.00
112_G	144_A	2.236	1.00
39_A	42_R	2.225	1.00
384_R	388_I	2.213	1.00
35_R	39_A	2.186	1.00
41_T	228_V	2.152	1.00
115_V	143_A	2.109	1.00
221_E	266_H	2.097	1.00
219_D	291_D	2.070	1.00
220_A	263_T	2.059	1.00
89_T	197_T	2.027	1.00
136_A	140_A	2.023	1.00
247_A	269_C	2.009	1.00
280_S	346_A	2.004	1.00
221_E	264_R	1.997	1.00
211_H	268_V	1.929	1.00
34_E	228_V	1.927	1.00
244_T	269_C	1.922	1.00
89_T	195_T	1.876	1.00
289_L	352_V	1.870	1.00
94_F	116_M	1.868	1.00
18_L	241_G	1.860	1.00
41_T	269_C	1.851	1.00
39_A	43_D	1.851	1.00
246_M	301_V	1.827	1.00
137_H	140_A	1.826	1.00
137_H	141_A	1.815	1.00
10_T	13_T	1.804	1.00
19_Q	375_L	1.762	1.00
29_A	272_A	1.756	1.00
45_L	212_A	1.744	1.00
42_R	52_A	1.698	1.00
270_F	295_V	1.693	1.00
70_E	195_T	1.693	1.00
246_M	387_A	1.686	1.00
58_P	206_T	1.685	1.00
147_V	175_V	1.681	1.00
74_D	77_A	1.679	1.00
225_T	270_F	1.673	1.00
94_F	194_V	1.671	1.00
147_V	177_V	1.666	1.00
20_R	24_T	1.628	1.00
284_A	346_A	1.625	1.00
43_D	47_Q	1.609	1.00
283_D	292_V	1.608	1.00
105_F	137_H	1.591	1.00
95_V	110_L	1.588	1.00
82_L	85_S	1.577	1.00
15_W	380_L	1.571	1.00
179_T	183_T	1.567	1.00
177_V	181_T	1.543	1.00
86_P	89_T	1.539	1.00
207_S	271_G	1.526	1.00
11_S	384_R	1.508	1.00
58_P	204_D	1.505	1.00
38_A	54_L	1.488	1.00
103_G	106_E	1.482	1.00
213_T	264_R	1.476	1.00
273_E	369_H	1.469	1.00
38_A	228_V	1.464	1.00
298_L	390_L	1.449	1.00
239_D	273_E	1.448	1.00
213_T	221_E	1.438	1.00
13_T	249_E	1.430	1.00
281_H	285_A	1.428	1.00
101_L	104_D	1.419	1.00
395_A	399_D	1.418	1.00
323_A	396_R	1.415	1.00
72_P	77_A	1.407	1.00
274_E	369_H	1.403	1.00
226_S	244_T	1.399	1.00
226_S	247_A	1.398	1.00
254_L	265_V	1.396	1.00
48_H	212_A	1.396	1.00
120_D	134_K	1.396	1.00
56_T	208_Q	1.383	1.00
65_G	199_D	1.383	1.00
273_E	368_G	1.379	1.00
228_V	269_C	1.377	1.00
97_L	108_A	1.376	1.00
110_L	143_A	1.376	1.00
72_P	76_T	1.371	1.00
45_L	248_V	1.371	1.00
48_H	248_V	1.369	1.00
100_G	105_F	1.364	1.00
45_L	251_A	1.355	1.00
17_H	44_A	1.352	1.00
109_D	113_A	1.343	1.00
183_T	187_R	1.342	1.00
65_G	201_D	1.339	1.00
239_D	369_H	1.336	1.00
105_F	141_A	1.333	1.00
54_L	210_V	1.331	1.00
15_W	19_Q	1.327	1.00
227_H	239_D	1.326	1.00
44_A	252_R	1.308	1.00
43_D	46_A	1.308	1.00
252_R	256_A	1.299	1.00
21_L	244_T	1.295	1.00
105_F	138_A	1.294	1.00
51_D	213_T	1.291	1.00
266_H	283_D	1.284	1.00
81_A	85_S	1.280	1.00
28_M	31_S	1.274	1.00
223_L	268_V	1.268	1.00
14_G	387_A	1.267	1.00
181_T	184_R	1.264	1.00
55_D	282_H	1.263	1.00
272_A	278_V	1.261	1.00
35_R	208_Q	1.256	1.00
230_A	236_G	1.252	1.00
235_D	374_T	1.210	1.00
284_A	350_H	1.195	1.00
92_G	114_I	1.189	1.00
323_A	326_D	1.185	1.00
151_H	154_G	1.172	1.00
227_H	273_E	1.167	1.00
15_W	379_E	1.164	1.00
97_L	115_V	1.162	1.00
296_L	394_A	1.152	1.00
139_V	171_E	1.151	1.00
13_T	252_R	1.150	1.00
147_V	194_V	1.146	1.00
325_S	332_I	1.140	1.00
37_A	228_V	1.137	1.00
215_G	218_T	1.136	1.00
196_L	200_A	1.134	1.00
15_W	375_L	1.134	1.00
240_N	297_N	1.133	1.00
261_L	265_V	1.132	1.00
182_G	186_S	1.128	1.00
87_A	199_D	1.127	1.00
184_R	187_R	1.121	1.00
55_D	209_N	1.118	1.00
289_L	350_H	1.116	1.00
17_H	248_V	1.111	0.99
25_P	32_D	1.110	0.99
18_L	245_A	1.109	0.99
135_Y	146_F	1.106	0.99
274_E	368_G	1.105	0.99
251_A	267_F	1.104	0.99
295_V	354_G	1.104	0.99
53_W	213_T	1.102	0.99
184_R	188_R	1.101	0.99
81_A	84_R	1.095	0.99
50_D	214_L	1.092	0.99
320_A	397_L	1.091	0.99
61_G	203_H	1.089	0.99
257_R	395_A	1.078	0.99
319_D	323_A	1.064	0.99
145_G	196_L	1.063	0.99
282_H	285_A	1.062	0.99
55_D	286_Q	1.055	0.99
250_L	394_A	1.053	0.99
44_A	48_H	1.050	0.99
38_A	208_Q	1.049	0.99
94_F	185_L	1.047	0.99
138_A	143_A	1.040	0.99
45_L	267_F	1.040	0.99
17_H	249_E	1.026	0.99
28_M	275_V	1.025	0.99
119_A	131_R	1.024	0.99
254_L	267_F	1.023	0.99
374_T	377_K	1.020	0.99
20_R	23_D	1.019	0.99
72_P	75_T	1.018	0.99
265_V	398_A	1.017	0.99
114_I	194_V	1.013	0.99
22_V	237_A	1.008	0.99
19_Q	23_D	1.006	0.99
102_P	141_A	1.006	0.99
118_A	186_S	1.005	0.99
225_T	268_V	0.998	0.99
325_S	389_L	0.998	0.99
215_G	264_R	0.994	0.99
9_F	253_I	0.988	0.99
69_I	196_L	0.987	0.99
270_F	347_Y	0.986	0.99
177_V	182_G	0.983	0.99
25_P	33_G	0.978	0.99
214_L	261_L	0.977	0.99
48_H	255_A	0.976	0.99
79_T	82_L	0.975	0.99
33_G	36_E	0.968	0.99
324_V	393_L	0.967	0.99
78_D	81_A	0.964	0.99
94_F	147_V	0.958	0.98
218_T	264_R	0.956	0.98
131_R	148_Y	0.956	0.98
319_D	322_N	0.955	0.98
97_L	146_F	0.951	0.98
281_H	346_A	0.951	0.98
17_H	48_H	0.947	0.98
284_A	347_Y	0.946	0.98
63_T	201_D	0.945	0.98
250_L	391_A	0.944	0.98
375_L	380_L	0.943	0.98
227_H	274_E	0.941	0.98
224_V	267_F	0.938	0.98
82_L	174_A	0.938	0.98
227_H	299_D	0.933	0.98
367_W	377_K	0.932	0.98
96_D	189_F	0.930	0.98
232_D	235_D	0.926	0.98
261_L	264_R	0.919	0.98
85_S	89_T	0.915	0.98
273_E	277_L	0.915	0.98
31_S	61_G	0.910	0.98
322_N	326_D	0.909	0.98
318_G	322_N	0.908	0.98
93_E	193_T	0.907	0.98
32_D	35_R	0.906	0.98
239_D	368_G	0.903	0.98
295_V	347_Y	0.903	0.98
135_Y	162_V	0.902	0.98
61_G	205_A	0.901	0.98
96_D	118_A	0.898	0.98
71_T	194_V	0.898	0.98
135_Y	174_A	0.891	0.98
333_T	337_A	0.885	0.97
175_V	198_V	0.884	0.97
16_T	19_Q	0.881	0.97
102_P	106_E	0.880	0.97
68_A	197_T	0.878	0.97
359_S	386_H	0.875	0.97
292_V	352_V	0.873	0.97
239_D	343_D	0.872	0.97
320_A	324_V	0.871	0.97
66_D	199_D	0.865	0.97
215_G	263_T	0.863	0.97
138_A	142_G	0.859	0.97
18_L	22_V	0.857	0.97
211_H	266_H	0.855	0.97
22_V	375_L	0.853	0.97
285_A	350_H	0.849	0.97
328_F	331_P	0.846	0.97
224_V	247_A	0.844	0.97
13_T	16_T	0.844	0.97
254_L	391_A	0.844	0.97
344_H	356_H	0.843	0.97
11_S	15_W	0.843	0.97
50_D	212_A	0.839	0.96
214_L	255_A	0.838	0.96
238_M	367_W	0.837	0.96
319_D	406_H	0.833	0.96
367_W	370_T	0.833	0.96
105_F	110_L	0.832	0.96
20_R	36_E	0.831	0.96
249_E	253_I	0.831	0.96
20_R	40_A	0.828	0.96
227_H	369_H	0.827	0.96
209_N	279_G	0.823	0.96
222_L	397_L	0.823	0.96
288_D	291_D	0.821	0.96
238_M	300_G	0.820	0.96
190_E	193_T	0.819	0.96
100_G	138_A	0.819	0.96
110_L	141_A	0.817	0.96
223_L	295_V	0.816	0.96
134_K	138_A	0.815	0.96
34_E	41_T	0.813	0.96
96_D	186_S	0.811	0.96
118_A	149_M	0.811	0.96
277_L	342_S	0.810	0.96
348_V	354_G	0.807	0.96
39_A	54_L	0.805	0.96
21_L	241_G	0.805	0.96
278_V	282_H	0.803	0.95
273_E	342_S	0.801	0.95
258_E	261_L	0.799	0.95
323_A	327_T	0.792	0.95
29_A	275_V	0.790	0.95
27_R	241_G	0.787	0.95
50_D	255_A	0.784	0.95
178_S	181_T	0.782	0.95
280_S	343_D	0.779	0.95
12_T	381_R	0.775	0.95
307_L	310_Y	0.775	0.95
227_H	368_G	0.773	0.94
300_G	368_G	0.770	0.94
243_G	299_D	0.769	0.94
380_L	383_F	0.769	0.94
238_M	303_R	0.768	0.94
331_P	334_V	0.766	0.94
227_H	343_D	0.764	0.94
273_E	297_N	0.762	0.94
157_P	160_G	0.759	0.94
111_D	142_G	0.759	0.94
300_G	342_S	0.759	0.94
254_L	394_A	0.758	0.94
223_L	292_V	0.752	0.94
357_A	390_L	0.750	0.94
342_S	368_G	0.749	0.93
16_T	20_R	0.745	0.93
222_L	398_A	0.744	0.93
50_D	267_F	0.740	0.93
327_T	392_A	0.737	0.93
315_D	318_G	0.736	0.93
226_S	240_N	0.732	0.93
53_W	211_H	0.731	0.93
238_M	365_R	0.730	0.93
138_A	172_I	0.730	0.93
255_A	260_A	0.730	0.93
369_H	373_D	0.727	0.92
242_A	378_L	0.721	0.92
99_Y	118_A	0.721	0.92
214_L	267_F	0.720	0.92
283_D	287_R	0.720	0.92
270_F	280_S	0.717	0.92
100_G	117_V	0.711	0.92
214_L	254_L	0.711	0.92
24_T	36_E	0.709	0.91
106_E	141_A	0.707	0.91
274_E	277_L	0.706	0.91
330_H	333_T	0.704	0.91
215_G	261_L	0.702	0.91
100_G	104_D	0.701	0.91
42_R	210_V	0.701	0.91
55_D	283_D	0.700	0.91
288_D	292_V	0.695	0.91
91_A	193_T	0.694	0.91
301_V	304_E	0.693	0.91
328_F	392_A	0.691	0.90
329_A	337_A	0.691	0.90
101_L	105_F	0.690	0.90
159_T	164_T	0.689	0.90
324_V	328_F	0.689	0.90
103_G	107_D	0.687	0.90
216_P	260_A	0.687	0.90
250_L	254_L	0.687	0.90
116_M	186_S	0.685	0.90
27_R	240_N	0.684	0.90
268_V	283_D	0.683	0.90
186_S	189_F	0.683	0.90
17_H	252_R	0.680	0.90
228_V	244_T	0.680	0.90
221_E	292_V	0.679	0.90
253_I	391_A	0.679	0.90
40_A	44_A	0.678	0.90
41_T	244_T	0.678	0.90
324_V	327_T	0.677	0.90
334_V	337_A	0.676	0.89
71_T	74_D	0.676	0.89
266_H	287_R	0.675	0.89
332_I	335_A	0.674	0.89
28_M	33_G	0.674	0.89
235_D	238_M	0.672	0.89
20_R	47_Q	0.671	0.89
60_Q	204_D	0.670	0.89
341_H	345_W	0.669	0.89
296_L	390_L	0.666	0.89
161_S	164_T	0.666	0.89
239_D	299_D	0.665	0.89
381_R	384_R	0.664	0.89
273_E	299_D	0.664	0.89
241_G	245_A	0.663	0.89
35_R	54_L	0.661	0.88
68_A	199_D	0.657	0.88
11_S	381_R	0.657	0.88
317_L	321_A	0.657	0.88
227_H	240_N	0.656	0.88
237_A	373_D	0.654	0.88
331_P	335_A	0.652	0.88
37_A	41_T	0.652	0.88
216_P	261_L	0.649	0.87
94_F	145_G	0.648	0.87
101_L	122_P	0.648	0.87
105_F	115_V	0.648	0.87
177_V	185_L	0.644	0.87
227_H	297_N	0.644	0.87
45_L	50_D	0.642	0.87
153_A	179_T	0.642	0.87
391_A	395_A	0.640	0.87
34_E	208_Q	0.640	0.87
345_W	349_K	0.640	0.87
239_D	274_E	0.639	0.87
320_A	323_A	0.639	0.87
255_A	259_S	0.638	0.87
212_A	267_F	0.637	0.86
88_G	199_D	0.636	0.86
238_M	302_V	0.636	0.86
153_A	180_E	0.635	0.86
224_V	390_L	0.634	0.86
317_L	353_P	0.633	0.86
300_G	303_R	0.631	0.86
222_L	293_R	0.629	0.86
55_D	211_H	0.629	0.86
316_A	319_D	0.628	0.86
313_R	318_G	0.627	0.86
397_L	400_D	0.627	0.86
207_S	272_A	0.626	0.86
299_D	342_S	0.626	0.86
221_E	287_R	0.626	0.86
254_L	261_L	0.625	0.85
214_L	265_V	0.625	0.85
305_R	308_K	0.625	0.85
328_F	385_E	0.624	0.85
157_P	161_S	0.624	0.85
79_T	83_P	0.623	0.85
321_A	325_S	0.622	0.85
14_G	246_M	0.622	0.85
114_I	196_L	0.620	0.85
272_A	275_V	0.619	0.85
236_G	373_D	0.619	0.85
222_L	294_A	0.616	0.85
119_A	150_N	0.616	0.85
277_L	280_S	0.612	0.84
57_F	286_Q	0.610	0.84
396_R	400_D	0.610	0.84
351_G	354_G	0.610	0.84
276_G	284_A	0.609	0.84
12_T	16_T	0.608	0.84
212_A	269_C	0.608	0.84
61_G	64_R	0.607	0.84
239_D	297_N	0.606	0.84
274_E	280_S	0.605	0.84
162_V	165_G	0.604	0.83
331_P	385_E	0.603	0.83
133_E	136_A	0.603	0.83
160_G	163_G	0.601	0.83
340_P	348_V	0.601	0.83
163_G	166_D	0.601	0.83
330_H	335_A	0.599	0.83
333_T	336_P	0.599	0.83
346_A	349_K	0.599	0.83
341_H	368_G	0.598	0.83
151_H	179_T	0.598	0.83
315_D	332_I	0.597	0.83
316_A	405_A	0.595	0.83
93_E	191_H	0.594	0.82
78_D	83_P	0.593	0.82
158_A	164_T	0.587	0.82
297_N	343_D	0.587	0.82
50_D	251_A	0.587	0.82
306_T	309_L	0.587	0.82
116_M	147_V	0.586	0.82
159_T	162_V	0.586	0.82
17_H	20_R	0.585	0.81
79_T	84_R	0.585	0.81
99_Y	104_D	0.584	0.81
158_A	162_V	0.584	0.81
116_M	189_F	0.584	0.81
97_L	105_F	0.584	0.81
23_D	187_R	0.582	0.81
31_S	63_T	0.582	0.81
297_N	342_S	0.582	0.81
343_D	368_G	0.582	0.81
117_V	148_Y	0.579	0.81
170_G	173_P	0.578	0.81
400_D	404_V	0.577	0.81
302_V	383_F	0.577	0.81
34_E	38_A	0.576	0.81
69_I	175_V	0.575	0.80
224_V	265_V	0.575	0.80
220_A	291_D	0.572	0.80
157_P	162_V	0.572	0.80
378_L	383_F	0.572	0.80
92_G	113_A	0.570	0.80
19_Q	380_L	0.568	0.80
21_L	37_A	0.566	0.79
72_P	188_R	0.566	0.79
236_G	239_D	0.565	0.79
315_D	322_N	0.563	0.79
316_A	320_A	0.562	0.79
139_V	172_I	0.562	0.79
321_A	393_L	0.562	0.79
26_T	233_I	0.561	0.79
294_A	355_Y	0.560	0.79
250_L	253_I	0.560	0.79
160_G	164_T	0.559	0.79
340_P	345_W	0.559	0.79
317_L	324_V	0.557	0.78
97_L	100_G	0.557	0.78
162_V	166_D	0.556	0.78
217_D	264_R	0.556	0.78
29_A	34_E	0.555	0.78
81_A	275_V	0.555	0.78
138_A	148_Y	0.555	0.78
273_E	343_D	0.555	0.78
293_R	403_A	0.554	0.78
159_T	163_G	0.554	0.78
136_A	139_V	0.554	0.78
131_R	273_E	0.553	0.78
14_G	245_A	0.551	0.78
382_T	386_H	0.550	0.77
97_L	143_A	0.547	0.77
131_R	150_N	0.547	0.77
196_L	199_D	0.546	0.77
80_I	84_R	0.546	0.77
142_G	145_G	0.546	0.77
160_G	166_D	0.546	0.77
322_N	334_V	0.546	0.77
27_R	37_A	0.546	0.77
64_R	232_D	0.544	0.77
388_I	392_A	0.544	0.77
112_G	143_A	0.543	0.77
287_R	292_V	0.543	0.77
105_F	134_K	0.543	0.77
17_H	245_A	0.543	0.77
13_T	17_H	0.542	0.76
66_D	197_T	0.542	0.76
322_N	325_S	0.542	0.76
100_G	134_K	0.541	0.76
320_A	396_R	0.541	0.76
104_D	107_D	0.541	0.76
318_G	321_A	0.537	0.76
289_L	292_V	0.535	0.75
313_R	317_L	0.534	0.75
34_E	37_A	0.534	0.75
242_A	302_V	0.534	0.75
160_G	165_G	0.533	0.75
331_P	336_P	0.533	0.75
223_L	347_Y	0.530	0.75
295_V	346_A	0.530	0.75
155_C	158_A	0.529	0.75
274_E	343_D	0.529	0.75
222_L	394_A	0.528	0.75
27_R	230_A	0.527	0.74
331_P	337_A	0.527	0.74
73_A	193_T	0.526	0.74
9_F	387_A	0.526	0.74
277_L	299_D	0.524	0.74
161_S	165_G	0.524	0.74
270_F	338_L	0.523	0.74
214_L	264_R	0.523	0.74
294_A	317_L	0.523	0.74
84_R	87_A	0.522	0.74
24_T	40_A	0.521	0.74
262_D	401_G	0.521	0.74
77_A	256_A	0.521	0.74
304_E	307_L	0.521	0.74
34_E	207_S	0.520	0.73
210_V	289_L	0.520	0.73
315_D	321_A	0.519	0.73
73_A	77_A	0.518	0.73
280_S	284_A	0.516	0.73
20_R	44_A	0.516	0.73
9_F	388_I	0.516	0.73
343_D	369_H	0.515	0.73
104_D	108_A	0.515	0.73
238_M	242_A	0.515	0.73
223_L	266_H	0.515	0.73
276_G	343_D	0.513	0.72
95_V	115_V	0.512	0.72
26_T	33_G	0.511	0.72
355_Y	393_L	0.511	0.72
332_I	337_A	0.511	0.72
246_M	250_L	0.510	0.72
281_H	349_K	0.510	0.72
307_L	325_S	0.510	0.72
59_V	272_A	0.509	0.72
101_L	121_V	0.509	0.72
119_A	148_Y	0.508	0.72
85_S	88_G	0.503	0.71
296_L	397_L	0.501	0.71
229_D	276_G	0.501	0.71
330_H	334_V	0.500	0.71
80_I	83_P	0.500	0.71

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4tweA	2	0.9746	100	0.286	Contact Map
3kasA	2	0.9769	100	0.289	Contact Map
3fedA	2	0.9746	100	0.294	Contact Map
2ek8A	2	0.9099	100	0.302	Contact Map
3iibA	2	0.9353	100	0.338	Contact Map
4r12A	1	0.8337	100	0.518	Contact Map
3k9tA	3	0.8268	100	0.552	Contact Map
1tkjA	1	0.5797	100	0.591	Contact Map
5a63A	1	0.8522	100	0.609	Contact Map
3guxA	1	0.5381	100	0.617	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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