Q9HRL2 - HALSA - GREMLIN Contacts

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Q9HRL2 - F420H2:quinone oxidoreductase chain M

UniProt:	Q9HRL2	Sequences: MMIEALLGVTLLSALVVMLAPDRIAGKLAAGLSLLPVVGSVWMFVQFDGSGNALLEGGSLAFETMTHWITIGPYTLNWHVGIDGISMPLVVLSTVLTTLAITSAWTPIDERQSQFYALMLLMEASLLGVFTALDFFVWFVFWEFVLVPMYFLIGIWGGPRRKYAAIKFFVYTNVASLLMFIGFMALVFGLDVTTMDMPAIAQAIHAGQFGTTYGLGAETLKTVAFFAMFIGFAVKVPTVPLHTWLPDAHVQAPTPASVMLAGVLLKMGTYALLRFNFTMMPGIAQQYAVPIAALAVLSVIYGAMLALAQRDLKRIVAYSSVSSMGYVILGLVAYNYYGVGGATFQMVAHGLISGLMFMCVGVIYNTAHTRMVGDLSGIADKMPVTAAVFIAAAFGYMGLPLMAGFAGELFIFLGGFGADFAHAQLFTALAMFGIVIVAGYLLFAMQRVLFGPFAAETDYDIVPAALHDTVPIVALLLLVIVAGTVPNVFYGMIQDAVTPVVDAAASASAVVVSTGGVFL	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	519 (457)
Sequences:	20115 (12530)
Seq/√Len:	586.1

ECOLI - HYFB NUOL NUOM HYCC HYFF HYFD NUON
BACSU - MRPA MRPD NDHF
HALSA - Q9HRL2 Q9HRL3 Q9HRT0 Q9HRS9 Q9HRL1 Q9HRS8
SULSO - Q980G8 Q97ZA6 Q97ZA9 Q980G9

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
83_D	274_R	4.762	1.00
355_L	392_A	4.623	1.00
128_G	141_F	4.534	1.00
196_D	199_A	4.071	1.00
90_V	131_T	3.700	1.00
154_G	165_A	3.526	1.00
348_A	403_A	3.285	1.00
97_T	123_E	3.198	1.00
299_V	433_G	3.092	1.00
167_K	247_D	3.086	1.00
311_D	370_R	3.070	1.00
194_T	199_A	3.022	1.00
345_Q	407_G	2.938	1.00
390_I	445_M	2.826	1.00
310_R	373_G	2.782	1.00
295_A	332_V	2.621	1.00
93_S	130_F	2.601	1.00
316_V	360_V	2.599	1.00
369_T	374_D	2.592	1.00
11_L	124_A	2.577	1.00
125_S	144_F	2.562	1.00
90_V	127_L	2.502	1.00
182_G	227_A	2.481	1.00
371_M	374_D	2.468	1.00
104_A	115_F	2.456	1.00
238_T	328_I	2.441	1.00
393_A	441_L	2.317	1.00
315_I	372_V	2.276	1.00
94_T	127_L	2.269	1.00
307_L	439_G	2.255	1.00
81_G	133_L	2.221	1.00
329_L	430_A	2.178	1.00
330_G	411_I	2.002	1.00
44_F	48_D	1.999	1.00
265_L	320_S	1.997	1.00
29_A	33_S	1.973	1.00
289_V	293_A	1.966	1.00
344_F	407_G	1.917	1.00
300_I	433_G	1.882	1.00
382_M	385_T	1.824	1.00
199_A	202_Q	1.818	1.00
319_S	440_Y	1.817	1.00
233_A	238_T	1.812	1.00
303_A	322_S	1.790	1.00
310_R	371_M	1.770	1.00
135_F	275_F	1.756	1.00
443_F	447_R	1.739	1.00
18_M	21_P	1.736	1.00
164_A	251_Q	1.726	1.00
312_L	444_A	1.725	1.00
466_L	470_V	1.714	1.00
199_A	203_A	1.706	1.00
83_D	86_S	1.704	1.00
412_F	430_A	1.693	1.00
37_V	44_F	1.693	1.00
135_F	200_I	1.690	1.00
92_L	350_G	1.686	1.00
286_Q	289_V	1.686	1.00
86_S	270_Y	1.683	1.00
341_G	414_G	1.676	1.00
424_Q	428_A	1.674	1.00
292_A	332_V	1.667	1.00
138_W	271_A	1.660	1.00
379_A	386_A	1.647	1.00
385_T	463_P	1.640	1.00
158_G	251_Q	1.632	1.00
29_A	40_S	1.627	1.00
111_R	114_Q	1.623	1.00
273_L	331_L	1.623	1.00
485_V	488_V	1.622	1.00
34_L	38_V	1.608	1.00
477_L	481_V	1.606	1.00
351_L	478_L	1.605	1.00
296_V	429_L	1.604	1.00
237_P	245_L	1.598	1.00
333_A	338_G	1.598	1.00
309_Q	314_R	1.596	1.00
133_L	198_P	1.585	1.00
229_F	233_A	1.572	1.00
40_S	43_M	1.566	1.00
42_W	46_Q	1.563	1.00
239_V	297_L	1.555	1.00
24_I	27_K	1.544	1.00
132_A	137_V	1.530	1.00
118_L	151_F	1.522	1.00
88_P	347_V	1.511	1.00
415_G	427_T	1.507	1.00
101_I	116_Y	1.498	1.00
134_D	196_D	1.491	1.00
291_I	332_V	1.489	1.00
36_P	40_S	1.489	1.00
43_M	47_F	1.480	1.00
219_T	223_V	1.476	1.00
81_G	84_G	1.472	1.00
391_A	476_L	1.462	1.00
26_G	29_A	1.446	1.00
101_I	119_M	1.441	1.00
413_L	417_G	1.439	1.00
182_G	231_G	1.438	1.00
158_G	161_R	1.434	1.00
40_S	47_F	1.429	1.00
13_S	32_L	1.429	1.00
389_F	393_A	1.418	1.00
303_A	433_G	1.416	1.00
41_V	45_V	1.415	1.00
134_D	195_M	1.413	1.00
7_L	10_T	1.412	1.00
33_S	37_V	1.408	1.00
292_A	426_F	1.408	1.00
331_L	342_A	1.392	1.00
238_T	294_L	1.390	1.00
232_F	271_A	1.389	1.00
152_L	256_A	1.386	1.00
67_H	77_N	1.384	1.00
47_F	51_G	1.380	1.00
129_V	267_M	1.379	1.00
386_A	450_F	1.377	1.00
229_F	291_I	1.372	1.00
474_A	478_L	1.364	1.00
37_V	41_V	1.356	1.00
327_V	342_A	1.354	1.00
33_S	36_P	1.347	1.00
88_P	343_T	1.346	1.00
272_L	328_I	1.344	1.00
82_I	131_T	1.341	1.00
288_A	292_A	1.340	1.00
43_M	46_Q	1.332	1.00
273_L	342_A	1.327	1.00
190_L	224_A	1.323	1.00
487_N	491_G	1.320	1.00
35_L	39_G	1.318	1.00
32_L	36_P	1.302	1.00
182_G	228_M	1.300	1.00
389_F	444_A	1.294	1.00
160_R	251_Q	1.292	1.00
103_S	358_M	1.290	1.00
330_G	338_G	1.286	1.00
352_I	395_G	1.285	1.00
333_A	415_G	1.281	1.00
79_H	133_L	1.278	1.00
465_A	468_D	1.273	1.00
179_M	231_G	1.270	1.00
386_A	445_M	1.269	1.00
21_P	113_S	1.269	1.00
65_M	77_N	1.260	1.00
329_L	415_G	1.259	1.00
473_V	477_L	1.257	1.00
138_W	197_M	1.255	1.00
40_S	94_T	1.247	1.00
356_M	392_A	1.246	1.00
330_G	342_A	1.237	1.00
198_P	202_Q	1.236	1.00
7_L	124_A	1.235	1.00
301_Y	305_L	1.220	1.00
14_A	18_M	1.217	1.00
348_A	407_G	1.214	1.00
182_G	224_A	1.213	1.00
46_Q	50_S	1.213	1.00
466_L	469_T	1.212	1.00
6_L	10_T	1.208	1.00
135_F	183_F	1.207	1.00
171_Y	243_T	1.204	1.00
14_A	17_V	1.198	1.00
67_H	70_T	1.197	1.00
372_V	448_V	1.195	1.00
471_P	474_A	1.187	1.00
64_T	67_H	1.185	1.00
96_L	354_G	1.185	1.00
247_D	314_R	1.180	1.00
122_M	126_L	1.177	1.00
40_S	44_F	1.174	1.00
38_V	42_W	1.172	1.00
94_T	98_T	1.160	1.00
388_V	476_L	1.156	1.00
28_L	31_G	1.151	1.00
488_V	491_G	1.148	1.00
30_A	34_L	1.145	1.00
96_L	350_G	1.143	1.00
233_A	294_L	1.138	1.00
99_L	474_A	1.127	1.00
26_G	30_A	1.127	1.00
29_A	37_V	1.125	1.00
341_G	410_F	1.123	1.00
70_T	73_P	1.121	1.00
36_P	39_G	1.120	1.00
396_Y	441_L	1.118	1.00
322_S	437_V	1.115	1.00
85_I	273_L	1.111	1.00
5_A	9_V	1.110	1.00
136_F	195_M	1.106	1.00
393_A	445_M	1.105	1.00
139_F	180_F	1.103	1.00
133_L	196_D	1.101	1.00
394_F	399_L	1.099	1.00
163_Y	167_K	1.099	1.00
416_F	427_T	1.098	1.00
30_A	44_F	1.097	1.00
390_I	449_L	1.094	1.00
29_A	32_L	1.093	1.00
293_A	297_L	1.093	1.00
359_C	389_F	1.092	1.00
183_F	228_M	1.091	1.00
17_V	21_P	1.090	1.00
359_C	472_I	1.081	1.00
392_A	476_L	1.079	1.00
425_L	428_A	1.076	1.00
28_L	32_L	1.075	1.00
388_V	472_I	1.075	1.00
89_L	346_M	1.075	1.00
36_P	43_M	1.068	1.00
175_A	234_V	1.065	1.00
364_Y	370_R	1.063	1.00
336_Y	340_G	1.054	1.00
295_A	325_G	1.052	1.00
30_A	37_V	1.052	1.00
98_T	102_T	1.051	1.00
82_I	87_M	1.049	1.00
239_V	301_Y	1.048	1.00
366_T	382_M	1.047	1.00
96_L	262_G	1.044	1.00
437_V	440_Y	1.039	1.00
86_S	274_R	1.039	1.00
384_V	387_A	1.037	1.00
478_L	482_A	1.034	1.00
185_A	189_G	1.030	1.00
194_T	200_I	1.030	1.00
45_V	49_G	1.029	1.00
30_A	33_S	1.028	1.00
376_S	454_A	1.027	1.00
229_F	272_L	1.027	1.00
410_F	413_L	1.026	1.00
119_M	259_M	1.026	1.00
234_V	241_L	1.019	1.00
467_H	471_P	1.017	1.00
34_L	98_T	1.017	1.00
224_A	228_M	1.014	1.00
179_M	183_F	1.012	1.00
285_Q	288_A	1.012	1.00
23_R	27_K	1.009	1.00
384_V	473_V	1.006	1.00
105_W	108_I	1.005	1.00
389_F	449_L	0.999	1.00
197_M	201_A	0.997	1.00
236_V	269_T	0.994	1.00
120_L	124_A	0.980	1.00
338_G	414_G	0.975	1.00
222_T	287_Y	0.973	1.00
289_V	292_A	0.972	1.00
386_A	449_L	0.966	1.00
428_A	432_F	0.964	1.00
419_D	423_A	0.963	1.00
363_I	378_I	0.962	1.00
93_S	123_E	0.960	1.00
302_G	325_G	0.960	1.00
385_T	464_A	0.960	1.00
269_T	327_V	0.960	1.00
355_L	475_L	0.957	1.00
403_A	482_A	0.954	1.00
95_V	99_L	0.952	1.00
103_S	361_G	0.950	1.00
254_T	313_K	0.950	1.00
85_I	343_T	0.946	1.00
367_A	375_L	0.945	1.00
388_V	473_V	0.945	1.00
384_V	388_V	0.944	1.00
23_R	26_G	0.942	1.00
86_S	90_V	0.933	1.00
14_A	121_L	0.932	1.00
185_A	188_F	0.931	1.00
441_L	444_A	0.931	1.00
312_L	360_V	0.930	1.00
194_T	197_M	0.927	1.00
272_L	331_L	0.926	1.00
258_V	358_M	0.925	1.00
335_N	338_G	0.923	1.00
304_M	436_I	0.922	1.00
161_R	251_Q	0.922	1.00
14_A	117_A	0.922	1.00
365_N	462_V	0.920	1.00
362_V	385_T	0.920	1.00
97_T	119_M	0.918	1.00
366_T	468_D	0.916	1.00
188_F	195_M	0.916	1.00
159_P	163_Y	0.914	1.00
349_H	353_S	0.913	1.00
433_G	436_I	0.912	1.00
257_S	265_L	0.909	1.00
46_Q	49_G	0.907	1.00
246_P	318_Y	0.907	1.00
10_T	14_A	0.906	1.00
223_V	227_A	0.904	1.00
89_L	270_Y	0.902	1.00
186_L	220_L	0.899	1.00
372_V	447_R	0.898	1.00
178_L	227_A	0.895	1.00
270_Y	274_R	0.893	1.00
362_V	464_A	0.893	1.00
335_N	414_G	0.892	1.00
139_F	183_F	0.891	1.00
121_L	148_P	0.891	1.00
295_A	329_L	0.889	1.00
162_K	165_A	0.885	1.00
269_T	346_M	0.884	1.00
125_S	148_P	0.883	1.00
273_L	339_V	0.879	1.00
153_I	248_A	0.877	1.00
445_M	450_F	0.876	1.00
312_L	375_L	0.875	1.00
149_M	264_L	0.873	1.00
30_A	47_F	0.873	1.00
412_F	427_T	0.871	1.00
330_G	341_G	0.868	1.00
362_V	472_I	0.867	1.00
344_F	348_A	0.866	1.00
222_T	286_Q	0.864	1.00
48_D	51_G	0.864	1.00
323_S	345_Q	0.863	1.00
217_A	220_L	0.859	1.00
327_V	346_M	0.858	1.00
315_I	444_A	0.853	1.00
37_V	40_S	0.853	1.00
381_K	453_F	0.852	1.00
481_V	485_V	0.852	1.00
226_F	230_I	0.852	1.00
299_V	325_G	0.849	1.00
297_L	301_Y	0.849	1.00
139_F	143_E	0.848	1.00
311_D	371_M	0.844	1.00
145_V	264_L	0.843	1.00
376_S	447_R	0.843	1.00
269_T	328_I	0.843	1.00
320_S	349_H	0.842	1.00
100_A	358_M	0.841	1.00
299_V	329_L	0.840	1.00
292_A	295_A	0.839	1.00
323_S	437_V	0.839	1.00
303_A	436_I	0.837	1.00
409_L	413_L	0.835	1.00
323_S	440_Y	0.835	1.00
296_V	426_F	0.835	1.00
178_L	230_I	0.832	1.00
106_T	109_D	0.831	1.00
44_F	47_F	0.827	1.00
387_A	391_A	0.827	1.00
31_G	35_L	0.824	1.00
29_A	44_F	0.824	1.00
30_A	40_S	0.824	1.00
92_L	347_V	0.815	1.00
283_I	286_Q	0.812	1.00
80_V	131_T	0.810	1.00
303_A	440_Y	0.807	1.00
127_L	131_T	0.805	1.00
79_H	196_D	0.804	1.00
284_A	288_A	0.804	1.00
476_L	480_I	0.803	1.00
122_M	149_M	0.802	1.00
295_A	328_I	0.802	1.00
7_L	80_V	0.801	1.00
29_A	51_G	0.798	1.00
195_M	199_A	0.798	1.00
192_V	200_I	0.796	1.00
7_L	131_T	0.796	1.00
218_E	222_T	0.794	1.00
115_F	255_P	0.793	1.00
47_F	50_S	0.792	1.00
302_G	305_L	0.792	1.00
261_A	353_S	0.791	1.00
386_A	390_I	0.791	1.00
37_V	51_G	0.789	1.00
454_A	457_T	0.787	1.00
296_V	329_L	0.787	1.00
13_S	17_V	0.784	1.00
22_D	26_G	0.784	1.00
403_A	479_V	0.782	1.00
126_L	263_V	0.782	1.00
30_A	48_D	0.780	1.00
125_S	141_F	0.778	1.00
476_L	479_V	0.777	1.00
6_L	18_M	0.775	1.00
126_L	145_V	0.774	1.00
306_A	440_Y	0.774	1.00
25_A	29_A	0.774	1.00
91_V	95_V	0.772	1.00
130_F	270_Y	0.770	1.00
292_A	296_V	0.770	1.00
225_F	287_Y	0.768	1.00
218_E	221_K	0.768	1.00
150_Y	165_A	0.766	1.00
269_T	324_M	0.765	1.00
376_S	451_G	0.764	1.00
292_A	329_L	0.763	1.00
219_T	222_T	0.763	1.00
8_G	12_L	0.762	1.00
9_V	13_S	0.760	1.00
29_A	43_M	0.760	1.00
326_Y	411_I	0.759	1.00
187_V	224_A	0.759	1.00
217_A	221_K	0.756	1.00
37_V	43_M	0.755	1.00
87_M	91_V	0.754	1.00
22_D	27_K	0.754	1.00
43_M	51_G	0.752	1.00
393_A	444_A	0.750	1.00
32_L	44_F	0.749	1.00
63_E	79_H	0.748	1.00
142_W	179_M	0.747	1.00
10_T	13_S	0.744	1.00
105_W	109_D	0.743	1.00
395_G	402_M	0.743	1.00
150_Y	172_T	0.742	1.00
201_A	278_T	0.740	1.00
14_A	124_A	0.738	1.00
470_V	474_A	0.738	1.00
302_G	322_S	0.735	1.00
40_S	48_D	0.735	1.00
418_A	423_A	0.734	1.00
134_D	137_V	0.733	1.00
469_T	473_V	0.733	1.00
387_A	449_L	0.733	1.00
464_A	469_T	0.732	1.00
316_V	356_M	0.732	1.00
22_D	25_A	0.731	1.00
358_M	471_P	0.731	1.00
381_K	459_Y	0.730	1.00
333_A	418_A	0.730	1.00
93_S	126_L	0.729	1.00
37_V	49_G	0.728	1.00
29_A	50_S	0.727	1.00
397_M	438_A	0.726	1.00
29_A	47_F	0.722	1.00
28_L	33_S	0.722	1.00
96_L	259_M	0.721	1.00
222_T	226_F	0.720	1.00
76_L	136_F	0.720	1.00
112_Q	116_Y	0.717	1.00
419_D	424_Q	0.716	1.00
27_K	30_A	0.716	1.00
173_N	176_S	0.714	1.00
99_L	475_L	0.714	1.00
30_A	36_P	0.713	1.00
29_A	39_G	0.712	1.00
62_F	65_M	0.711	1.00
25_A	28_L	0.711	1.00
18_M	117_A	0.711	1.00
382_M	463_P	0.709	1.00
352_I	479_V	0.709	1.00
46_Q	51_G	0.707	1.00
126_L	264_L	0.707	1.00
166_I	170_V	0.704	1.00
300_I	304_M	0.703	1.00
27_K	31_G	0.703	1.00
352_I	404_G	0.703	1.00
257_S	313_K	0.702	1.00
153_I	260_L	0.701	1.00
312_L	448_V	0.701	1.00
401_L	484_T	0.701	1.00
175_A	231_G	0.699	1.00
67_H	75_T	0.699	1.00
145_V	267_M	0.699	1.00
319_S	349_H	0.697	1.00
380_D	383_P	0.696	1.00
36_P	46_Q	0.693	1.00
40_S	51_G	0.691	1.00
113_S	117_A	0.690	1.00
435_V	439_G	0.690	1.00
27_K	32_L	0.688	1.00
160_R	250_V	0.688	1.00
345_Q	352_I	0.686	1.00
153_I	252_A	0.686	1.00
36_P	42_W	0.683	1.00
470_V	473_V	0.682	1.00
31_G	36_P	0.682	1.00
309_Q	318_Y	0.682	1.00
387_A	390_I	0.678	1.00
369_T	375_L	0.678	1.00
82_I	86_S	0.677	1.00
30_A	39_G	0.674	1.00
25_A	30_A	0.673	1.00
250_V	311_D	0.672	1.00
402_M	406_A	0.671	1.00
13_S	36_P	0.671	1.00
122_M	264_L	0.670	1.00
303_A	319_S	0.670	1.00
463_P	469_T	0.670	1.00
275_F	279_M	0.669	1.00
5_A	10_T	0.668	1.00
252_A	257_S	0.667	1.00
142_W	267_M	0.666	1.00
160_R	163_Y	0.665	1.00
95_V	478_L	0.664	1.00
99_L	354_G	0.663	1.00
100_A	258_V	0.661	1.00
290_P	293_A	0.660	1.00
429_L	433_G	0.656	1.00
300_I	429_L	0.655	1.00
79_H	134_D	0.655	1.00
28_L	40_S	0.655	1.00
99_L	471_P	0.654	1.00
438_A	442_L	0.652	1.00
102_T	471_P	0.650	1.00
42_W	45_V	0.650	1.00
28_L	36_P	0.649	1.00
216_G	219_T	0.649	1.00
442_L	446_Q	0.649	1.00
29_A	36_P	0.646	1.00
355_L	472_I	0.645	1.00
33_S	43_M	0.645	1.00
34_L	37_V	0.644	1.00
30_A	50_S	0.642	1.00
381_K	461_I	0.641	1.00
296_V	300_I	0.638	1.00
33_S	40_S	0.635	1.00
13_S	120_L	0.635	1.00
254_T	361_G	0.633	1.00
439_G	443_F	0.632	1.00
398_G	408_E	0.631	1.00
10_T	21_P	0.630	1.00
190_L	220_L	0.628	1.00
286_Q	290_P	0.628	1.00
100_A	262_G	0.626	1.00
445_M	449_L	0.618	1.00
81_G	198_P	0.618	1.00
323_S	353_S	0.618	1.00
91_V	94_T	0.617	1.00
85_I	270_Y	0.615	1.00
261_A	349_H	0.615	1.00
221_K	224_A	0.615	1.00
482_A	489_F	0.615	1.00
69_I	76_L	0.613	1.00
245_L	248_A	0.613	1.00
388_V	469_T	0.612	1.00
25_A	33_S	0.611	1.00
245_L	265_L	0.610	1.00
37_V	48_D	0.609	1.00
133_L	137_V	0.609	1.00
303_A	437_V	0.609	1.00
345_Q	348_A	0.607	1.00
41_V	95_V	0.606	1.00
103_S	258_V	0.606	1.00
326_Y	433_G	0.604	1.00
384_V	469_T	0.604	1.00
115_F	256_A	0.603	1.00
94_T	123_E	0.603	1.00
347_V	489_F	0.603	1.00
262_G	354_G	0.600	1.00
299_V	326_Y	0.599	1.00
135_F	197_M	0.599	1.00
114_Q	118_L	0.599	1.00
481_V	488_V	0.598	1.00
225_F	229_F	0.598	1.00
44_F	49_G	0.597	1.00
97_T	259_M	0.597	1.00
338_G	342_A	0.596	1.00
138_W	179_M	0.595	1.00
33_S	51_G	0.595	1.00
186_L	224_A	0.593	1.00
15_L	18_M	0.593	1.00
63_E	66_T	0.593	1.00
305_L	318_Y	0.592	1.00
379_A	449_L	0.592	1.00
36_P	49_G	0.592	1.00
254_T	257_S	0.590	1.00
32_L	47_F	0.590	1.00
257_S	260_L	0.590	1.00
359_C	388_V	0.589	1.00
408_E	434_I	0.589	1.00
410_F	490_Y	0.587	1.00
395_G	404_G	0.586	1.00
121_L	125_S	0.585	1.00
412_F	434_I	0.583	1.00
102_T	470_V	0.583	1.00
9_V	21_P	0.582	1.00
104_A	255_P	0.581	1.00
349_H	357_F	0.580	1.00
13_S	18_M	0.580	1.00
362_V	366_T	0.580	1.00
32_L	50_S	0.580	1.00
388_V	392_A	0.579	1.00
319_S	323_S	0.578	1.00
28_L	46_Q	0.578	1.00
41_V	44_F	0.578	1.00
28_L	43_M	0.576	1.00
246_P	321_V	0.574	1.00
32_L	40_S	0.574	1.00
391_A	480_I	0.573	1.00
461_I	464_A	0.572	1.00
351_L	403_A	0.572	1.00
7_L	21_P	0.571	1.00
257_S	349_H	0.570	1.00
7_L	14_A	0.569	1.00
100_A	255_P	0.569	1.00
293_A	296_V	0.567	1.00
192_V	196_D	0.566	1.00
431_M	434_I	0.565	1.00
309_Q	315_I	0.565	1.00
390_I	450_F	0.564	1.00
43_M	48_D	0.564	1.00
304_M	308_A	0.563	0.99
122_M	259_M	0.563	0.99
223_V	226_F	0.563	0.99
93_S	97_T	0.562	0.99
13_S	21_P	0.560	0.99
305_L	308_A	0.559	0.99
295_A	299_V	0.559	0.99
319_S	353_S	0.558	0.99
85_I	89_L	0.557	0.99
89_L	93_S	0.555	0.99
394_F	442_L	0.555	0.99
406_A	410_F	0.553	0.99
243_T	246_P	0.552	0.99
320_S	324_M	0.550	0.99
282_G	285_Q	0.550	0.99
31_G	39_G	0.548	0.99
198_P	201_A	0.544	0.99
44_F	91_V	0.544	0.99
261_A	357_F	0.544	0.99
100_A	119_M	0.542	0.99
187_V	200_I	0.542	0.99
126_L	267_M	0.541	0.99
239_V	302_G	0.541	0.99
362_V	468_D	0.540	0.99
382_M	461_I	0.540	0.99
378_I	382_M	0.540	0.99
398_G	404_G	0.540	0.99
253_P	313_K	0.539	0.99
392_A	479_V	0.539	0.99
93_S	127_L	0.538	0.99
220_L	224_A	0.538	0.99
33_S	47_F	0.537	0.99
39_G	43_M	0.537	0.99
347_V	482_A	0.536	0.99
45_V	48_D	0.534	0.99
480_I	483_G	0.532	0.99
236_V	272_L	0.531	0.99
225_F	280_M	0.530	0.99
31_G	38_V	0.530	0.99
200_I	203_A	0.529	0.99
40_S	49_G	0.528	0.99
29_A	116_Y	0.528	0.99
21_P	25_A	0.526	0.99
379_A	390_I	0.526	0.99
11_L	15_L	0.526	0.99
28_L	51_G	0.525	0.99
487_N	490_Y	0.525	0.99
118_L	121_L	0.524	0.99
372_V	375_L	0.524	0.99
60_L	63_E	0.523	0.99
35_L	40_S	0.522	0.99
6_L	9_V	0.522	0.99
359_C	392_A	0.521	0.99
30_A	46_Q	0.521	0.99
340_G	490_Y	0.520	0.99
274_R	278_T	0.519	0.99
143_E	235_K	0.519	0.99
37_V	47_F	0.519	0.99
377_G	453_F	0.518	0.99
383_P	386_A	0.517	0.99
250_V	314_R	0.517	0.99
425_L	429_L	0.516	0.99
278_T	281_P	0.516	0.99
225_F	279_M	0.516	0.99
183_F	231_G	0.515	0.99
123_E	127_L	0.514	0.99
220_L	223_V	0.514	0.99
416_F	424_Q	0.514	0.99
312_L	363_I	0.514	0.99
305_L	309_Q	0.513	0.99
432_F	436_I	0.513	0.99
139_F	176_S	0.512	0.99
44_F	51_G	0.512	0.99
262_G	266_K	0.512	0.99
344_F	410_F	0.511	0.99
92_L	346_M	0.510	0.99
400_P	405_F	0.509	0.99
352_I	396_Y	0.509	0.99
115_F	155_I	0.509	0.99
36_P	48_D	0.508	0.99
451_G	454_A	0.506	0.99
386_A	448_V	0.506	0.99
163_Y	247_D	0.505	0.99
389_F	441_L	0.505	0.99
31_G	37_V	0.504	0.99
39_G	42_W	0.503	0.99
32_L	35_L	0.503	0.99
32_L	48_D	0.502	0.99
323_S	326_Y	0.500	0.99

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3rkoM	1	0.9403	100	0.169	Contact Map
4he8M	1	0.8902	100	0.212	Contact Map
3rkoL	1	0.948	100	0.213	Contact Map
4he8L	1	0.9403	100	0.227	Contact Map
3rkoN	1	0.8748	100	0.236	Contact Map
4he8N	1	0.8227	100	0.282	Contact Map
4he8K	1	0.1773	31.4	0.966	Contact Map
3rkoK	1	0.185	27.7	0.967	Contact Map
4b4aA	1	0.2697	9.5	0.973	Contact Map
3wu2X	1	0.0713	6.9	0.975	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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