Q9HRF2 - HALSA - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

Q9HRF2 - Uncharacterized protein

UniProt:	Q9HRF2	Sequences: MGLRSQLSKLFRGPESFDLTSGRIGKPLFFLAMPIVITNLFQTAYNLADTFWLGQYNTDALAAISFAFPMVFLLISLGMGISVAGSVLVAQYTGAGKDEQAEYAASQTVTFSVLASLLLGGIGYFFVEDFLSVVGASDAVLRPATSYMQVVALGLAAMFGFAVFIALMRGYGDTITPMLVMFGSVVLNIVLDPFLIFGWTVVENAPLVGTVSFPRLGIQGAAIATVFSRALAFAVGLAIMFRGTRGVEINAADMLPDLSYLRRLVRIGLPASIEGTGRALSMNLLLFIVATFPDHIVAAYGIGTRVFSVVFLPAIAIARGVETMTGQNVGAGKPDRAARAARLAATMLFGVLSVLGLIVYWYPEPIVSVFVGAGQENSAQVIEAGSQFLRYVALTFGFIGIARAYTGSFRGAGKTMVAAAISVITLGVIRFPLAWATIGSLGSAGIWLSFAVSNVIGAIIAYAWYRRGTWRDTGVVDATTAQEDTGVEQSAQTD	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	494 (426)
Sequences:	18843 (14203)
Seq/√Len:	688.2

ECOLI - YEEO DINF MDTK WZXE
BACSU - YISQ YOEA YPNP NORM
HALSA - Q9HRF2 Q9HMS7 Q9HRF7 Q9HN79

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
97_K	100_Q	4.681	1.00
157_A	230_A	3.963	1.00
146_S	219_Q	3.325	1.00
65_S	301_G	3.263	1.00
367_V	385_G	3.136	1.00
90_A	326_G	3.081	1.00
362_Y	365_P	3.047	1.00
128_E	145_T	3.021	1.00
333_K	336_R	2.934	1.00
262_R	266_R	2.913	1.00
126_F	129_D	2.854	1.00
128_E	132_S	2.771	1.00
173_D	176_T	2.766	1.00
150_V	219_Q	2.533	1.00
85_G	108_T	2.514	1.00
194_F	199_W	2.475	1.00
187_L	231_L	2.444	1.00
92_Y	100_Q	2.441	1.00
145_T	149_Q	2.431	1.00
258_L	262_R	2.416	1.00
52_W	196_I	2.336	1.00
59_D	139_A	2.257	1.00
414_K	464_W	2.244	1.00
52_W	193_P	2.241	1.00
63_A	143_P	2.215	1.00
26_K	30_F	2.204	1.00
184_S	232_A	2.177	1.00
321_V	344_A	2.171	1.00
103_Y	257_D	2.160	1.00
180_V	235_V	2.115	1.00
143_P	146_S	2.112	1.00
442_G	445_G	2.088	1.00
342_R	346_T	2.078	1.00
137_S	294_D	2.072	1.00
379_A	383_E	2.038	1.00
363_P	390_R	2.018	1.00
160_G	233_F	2.006	1.00
150_V	222_A	2.003	1.00
154_G	226_V	1.978	1.00
57_N	60_A	1.973	1.00
387_Q	444_A	1.959	1.00
364_E	386_S	1.953	1.00
49_D	225_T	1.941	1.00
299_A	384_A	1.927	1.00
142_R	146_S	1.919	1.00
92_Y	97_K	1.914	1.00
380_Q	383_E	1.904	1.00
36_V	316_A	1.893	1.00
328_N	336_R	1.888	1.00
219_Q	223_I	1.875	1.00
58_T	378_S	1.861	1.00
112_S	163_V	1.845	1.00
216_L	223_I	1.845	1.00
53_L	221_A	1.835	1.00
196_I	221_A	1.801	1.00
363_P	386_S	1.785	1.00
52_W	192_D	1.772	1.00
295_H	380_Q	1.769	1.00
175_I	179_L	1.759	1.00
92_Y	95_A	1.746	1.00
194_F	198_G	1.720	1.00
329_V	412_A	1.704	1.00
132_S	141_L	1.702	1.00
234_A	238_A	1.699	1.00
257_D	260_Y	1.693	1.00
150_V	223_I	1.691	1.00
33_M	37_I	1.670	1.00
360_Y	390_R	1.660	1.00
153_L	156_A	1.654	1.00
398_F	455_V	1.639	1.00
180_V	236_G	1.638	1.00
127_V	145_T	1.637	1.00
341_A	405_Y	1.620	1.00
324_M	340_A	1.618	1.00
198_G	215_R	1.616	1.00
32_A	320_G	1.614	1.00
199_W	215_R	1.611	1.00
338_A	342_R	1.606	1.00
339_R	343_L	1.602	1.00
186_V	190_V	1.600	1.00
123_G	152_A	1.590	1.00
364_E	368_S	1.584	1.00
339_R	342_R	1.581	1.00
88_L	104_A	1.571	1.00
157_A	233_F	1.560	1.00
348_L	400_G	1.558	1.00
328_N	333_K	1.552	1.00
129_D	132_S	1.535	1.00
139_A	294_D	1.517	1.00
193_P	199_W	1.509	1.00
141_L	145_T	1.496	1.00
329_V	337_A	1.496	1.00
127_V	149_Q	1.490	1.00
386_S	390_R	1.487	1.00
356_G	360_Y	1.485	1.00
192_D	221_A	1.473	1.00
191_L	224_A	1.472	1.00
414_K	417_V	1.471	1.00
193_P	197_F	1.462	1.00
365_P	368_S	1.445	1.00
459_I	463_A	1.445	1.00
341_A	408_S	1.444	1.00
48_A	189_I	1.440	1.00
100_Q	103_Y	1.438	1.00
139_A	142_R	1.438	1.00
391_Y	448_L	1.435	1.00
441_L	445_G	1.426	1.00
120_G	156_A	1.424	1.00
164_F	236_G	1.420	1.00
335_D	339_R	1.416	1.00
150_V	226_V	1.411	1.00
129_D	133_V	1.394	1.00
128_E	142_R	1.392	1.00
24_I	324_M	1.391	1.00
132_S	138_D	1.386	1.00
25_G	343_L	1.378	1.00
98_D	102_E	1.375	1.00
67_A	148_M	1.375	1.00
131_L	141_L	1.365	1.00
195_L	199_W	1.362	1.00
190_V	193_P	1.359	1.00
138_D	142_R	1.358	1.00
368_S	382_I	1.358	1.00
92_Y	104_A	1.352	1.00
187_L	191_L	1.346	1.00
463_A	466_R	1.341	1.00
49_D	188_N	1.341	1.00
463_A	467_R	1.337	1.00
346_T	350_G	1.337	1.00
179_L	183_G	1.336	1.00
53_L	64_I	1.328	1.00
99_E	103_Y	1.325	1.00
238_A	242_R	1.320	1.00
60_A	143_P	1.315	1.00
190_V	194_F	1.314	1.00
22_G	26_K	1.313	1.00
41_F	182_F	1.309	1.00
219_Q	222_A	1.305	1.00
94_G	330_G	1.296	1.00
365_P	369_V	1.295	1.00
334_P	338_A	1.285	1.00
383_E	387_Q	1.283	1.00
91_Q	95_A	1.273	1.00
93_T	327_Q	1.268	1.00
360_Y	393_A	1.261	1.00
462_Y	466_R	1.258	1.00
417_V	464_W	1.258	1.00
56_Y	197_F	1.258	1.00
37_I	178_M	1.252	1.00
58_T	295_H	1.250	1.00
128_E	141_L	1.238	1.00
124_Y	149_Q	1.233	1.00
100_Q	260_Y	1.229	1.00
429_I	456_I	1.226	1.00
191_L	227_F	1.225	1.00
93_T	101_A	1.221	1.00
259_S	262_R	1.219	1.00
348_L	404_A	1.208	1.00
416_M	420_A	1.206	1.00
445_G	449_S	1.204	1.00
435_W	439_G	1.199	1.00
55_Q	372_G	1.192	1.00
180_V	239_I	1.192	1.00
62_A	298_A	1.191	1.00
195_L	216_L	1.191	1.00
367_V	382_I	1.188	1.00
424_I	428_V	1.185	1.00
50_T	305_R	1.183	1.00
357_L	361_W	1.180	1.00
91_Q	326_G	1.180	1.00
89_V	170_G	1.176	1.00
25_G	347_M	1.175	1.00
306_V	366_I	1.172	1.00
441_L	448_L	1.158	1.00
50_T	61_L	1.152	1.00
107_Q	261_L	1.151	1.00
91_Q	413_G	1.141	1.00
296_I	443_S	1.140	1.00
59_D	143_P	1.137	1.00
464_W	467_R	1.136	1.00
120_G	124_Y	1.120	1.00
195_L	227_F	1.119	1.00
384_A	387_Q	1.115	1.00
188_N	225_T	1.108	1.00
183_G	235_V	1.107	1.00
59_D	294_D	1.106	1.00
192_D	224_A	1.099	1.00
63_A	140_V	1.093	1.00
105_A	167_L	1.092	1.00
318_A	407_G	1.091	1.00
111_F	261_L	1.091	1.00
341_A	465_Y	1.085	1.00
131_L	144_A	1.084	1.00
432_P	436_A	1.080	1.00
325_T	337_A	1.075	1.00
428_V	432_P	1.075	1.00
64_I	218_I	1.074	1.00
55_Q	197_F	1.071	1.00
269_L	273_I	1.070	1.00
112_S	159_F	1.065	1.00
187_L	228_S	1.061	1.00
303_G	388_F	1.057	1.00
49_D	192_D	1.057	1.00
193_P	198_G	1.057	1.00
256_P	261_L	1.055	1.00
193_P	196_I	1.052	1.00
371_V	381_V	1.045	1.00
295_H	384_A	1.034	1.00
113_V	160_G	1.032	1.00
287_F	291_T	1.028	1.00
28_L	344_A	1.028	1.00
420_A	424_I	1.025	1.00
173_D	177_P	1.024	1.00
402_A	454_N	1.022	1.00
382_I	385_G	1.017	1.00
102_E	253_D	1.017	1.00
23_R	26_K	1.015	1.00
195_L	198_G	1.013	1.00
94_G	331_A	1.011	1.00
343_L	347_M	1.011	1.00
176_T	239_I	1.010	1.00
172_G	327_Q	1.008	1.00
124_Y	128_E	1.002	1.00
350_G	354_V	1.001	1.00
421_I	461_A	0.998	1.00
250_N	253_D	0.997	1.00
108_T	264_L	0.992	1.00
372_G	378_S	0.987	1.00
125_F	129_D	0.987	1.00
104_A	260_Y	0.986	1.00
198_G	216_L	0.984	1.00
437_T	441_L	0.984	1.00
434_A	438_I	0.980	1.00
149_Q	153_L	0.979	1.00
103_Y	260_Y	0.976	1.00
127_V	148_M	0.974	1.00
93_T	171_Y	0.966	1.00
223_I	226_V	0.961	1.00
247_V	251_A	0.961	1.00
328_N	340_A	0.956	1.00
91_Q	329_V	0.948	1.00
405_Y	465_Y	0.942	1.00
263_R	266_R	0.942	1.00
364_E	383_E	0.939	1.00
29_F	33_M	0.938	1.00
182_F	186_V	0.935	1.00
383_E	386_S	0.932	1.00
107_Q	256_P	0.927	1.00
391_Y	444_A	0.926	1.00
106_S	254_M	0.922	1.00
380_Q	384_A	0.920	1.00
27_P	30_F	0.919	1.00
299_A	381_V	0.919	1.00
226_V	230_A	0.917	1.00
164_F	233_F	0.916	1.00
66_F	136_A	0.916	1.00
93_T	98_D	0.915	1.00
146_S	149_Q	0.914	1.00
353_S	357_L	0.914	1.00
398_F	458_A	0.912	1.00
173_D	239_I	0.903	1.00
199_W	216_L	0.900	1.00
51_F	54_G	0.896	1.00
354_V	358_I	0.894	1.00
388_F	443_S	0.891	1.00
306_V	359_V	0.889	1.00
120_G	153_L	0.888	1.00
363_P	389_L	0.887	1.00
345_A	401_I	0.886	1.00
114_L	118_L	0.886	1.00
302_I	370_F	0.885	1.00
191_L	195_L	0.885	1.00
316_A	320_G	0.883	1.00
125_F	149_Q	0.880	1.00
192_D	225_T	0.880	1.00
296_I	384_A	0.880	1.00
360_Y	364_E	0.879	1.00
235_V	238_A	0.878	1.00
85_G	89_V	0.878	1.00
325_T	408_S	0.876	1.00
143_P	218_I	0.875	1.00
153_L	226_V	0.875	1.00
78_G	159_F	0.875	1.00
409_F	464_W	0.875	1.00
266_R	416_M	0.871	1.00
231_L	235_V	0.866	1.00
35_I	319_R	0.866	1.00
46_N	68_F	0.865	1.00
444_A	448_L	0.864	1.00
299_A	385_G	0.863	1.00
302_I	385_G	0.860	1.00
127_V	152_A	0.859	1.00
173_D	243_G	0.858	1.00
337_A	341_A	0.857	1.00
62_A	140_V	0.856	1.00
391_Y	451_A	0.851	1.00
337_A	412_A	0.851	1.00
371_V	378_S	0.847	1.00
71_V	151_V	0.845	1.00
382_I	386_S	0.842	1.00
273_I	419_A	0.842	1.00
325_T	411_G	0.841	1.00
31_L	174_T	0.840	1.00
367_V	386_S	0.839	1.00
188_N	192_D	0.837	1.00
91_Q	263_R	0.836	1.00
449_S	453_S	0.836	1.00
354_V	357_L	0.833	1.00
230_A	234_A	0.831	1.00
122_I	126_F	0.831	1.00
289_V	443_S	0.829	1.00
361_W	365_P	0.827	1.00
223_I	227_F	0.826	1.00
401_I	458_A	0.825	1.00
314_A	352_L	0.823	1.00
48_A	188_N	0.823	1.00
339_R	346_T	0.822	1.00
48_A	185_V	0.821	1.00
52_W	197_F	0.821	1.00
379_A	382_I	0.821	1.00
142_R	145_T	0.820	1.00
328_N	331_A	0.819	1.00
118_L	122_I	0.818	1.00
179_L	182_F	0.817	1.00
121_G	125_F	0.815	1.00
59_D	140_V	0.812	1.00
453_S	457_G	0.811	1.00
56_Y	215_R	0.809	1.00
429_I	432_P	0.801	1.00
277_G	423_V	0.800	1.00
161_F	232_A	0.800	1.00
245_R	248_E	0.797	1.00
168_M	240_M	0.797	1.00
290_A	297_V	0.794	1.00
260_Y	263_R	0.790	1.00
336_R	339_R	0.786	1.00
289_V	446_I	0.782	1.00
237_L	241_F	0.782	1.00
328_N	337_A	0.782	1.00
300_Y	447_W	0.778	1.00
108_T	163_V	0.777	1.00
350_G	353_S	0.776	1.00
164_F	240_M	0.776	1.00
343_L	346_T	0.775	1.00
90_A	170_G	0.773	1.00
425_T	457_G	0.773	1.00
317_I	344_A	0.772	1.00
433_L	452_V	0.771	1.00
89_V	167_L	0.768	1.00
360_Y	363_P	0.768	1.00
305_R	370_F	0.768	1.00
288_I	291_T	0.767	1.00
455_V	459_I	0.767	1.00
276_T	280_L	0.765	1.00
445_G	448_L	0.760	1.00
28_L	343_L	0.757	1.00
58_T	381_V	0.757	1.00
138_D	141_L	0.757	1.00
53_L	196_I	0.751	1.00
140_V	297_V	0.751	1.00
88_L	267_I	0.745	1.00
124_Y	127_V	0.745	1.00
110_T	254_M	0.744	1.00
99_E	253_D	0.741	1.00
41_F	185_V	0.741	1.00
168_M	176_T	0.740	1.00
110_T	114_L	0.740	1.00
293_P	296_I	0.740	1.00
178_M	182_F	0.740	1.00
217_G	220_G	0.738	1.00
378_S	382_I	0.736	1.00
88_L	92_Y	0.736	1.00
335_D	342_R	0.734	1.00
288_I	435_W	0.732	1.00
27_P	324_M	0.729	1.00
349_F	353_S	0.728	1.00
63_A	218_I	0.728	1.00
54_G	61_L	0.728	1.00
292_F	438_I	0.727	1.00
362_Y	366_I	0.726	1.00
188_N	228_S	0.725	1.00
87_V	91_Q	0.724	1.00
150_V	153_L	0.722	1.00
344_A	404_A	0.722	1.00
192_D	196_I	0.721	1.00
346_T	349_F	0.719	1.00
183_G	187_L	0.719	1.00
25_G	346_T	0.717	1.00
325_T	341_A	0.713	1.00
169_R	177_P	0.712	1.00
84_A	268_G	0.712	1.00
77_L	272_S	0.711	1.00
299_A	388_F	0.711	1.00
307_F	396_F	0.711	1.00
25_G	29_F	0.708	1.00
99_E	102_E	0.708	1.00
443_S	447_W	0.706	1.00
238_A	241_F	0.706	1.00
335_D	338_A	0.705	1.00
216_L	220_G	0.704	1.00
38_T	181_M	0.704	1.00
128_E	149_Q	0.704	1.00
103_Y	106_S	0.703	1.00
448_L	451_A	0.702	1.00
183_G	231_L	0.702	1.00
131_L	148_M	0.702	1.00
265_V	269_L	0.699	1.00
106_S	253_D	0.699	1.00
215_R	219_Q	0.697	1.00
289_V	300_Y	0.697	1.00
349_F	400_G	0.696	1.00
59_D	62_A	0.696	1.00
27_P	327_Q	0.695	1.00
95_A	330_G	0.694	1.00
291_T	439_G	0.694	1.00
317_I	351_V	0.689	1.00
353_S	397_G	0.689	1.00
168_M	236_G	0.688	1.00
247_V	250_N	0.688	1.00
136_A	290_A	0.686	1.00
146_S	218_I	0.685	1.00
286_L	290_A	0.684	1.00
153_L	157_A	0.682	1.00
270_P	419_A	0.682	1.00
438_I	445_G	0.682	1.00
154_G	157_A	0.682	1.00
284_L	431_F	0.677	1.00
139_A	143_P	0.677	1.00
102_E	250_N	0.677	1.00
110_T	256_P	0.675	1.00
437_T	445_G	0.675	1.00
352_L	400_G	0.675	1.00
53_L	60_A	0.673	1.00
44_A	48_A	0.673	1.00
45_Y	225_T	0.670	1.00
417_V	421_I	0.667	1.00
288_I	438_I	0.667	1.00
407_G	411_G	0.666	1.00
131_L	145_T	0.664	1.00
51_F	369_V	0.663	1.00
227_F	230_A	0.662	1.00
126_F	130_F	0.662	1.00
28_L	320_G	0.660	1.00
147_Y	192_D	0.659	1.00
118_L	121_G	0.658	1.00
113_V	117_L	0.657	1.00
216_L	219_Q	0.656	1.00
242_R	245_R	0.656	1.00
433_L	437_T	0.653	1.00
176_T	235_V	0.653	1.00
47_L	309_V	0.651	1.00
51_F	55_Q	0.649	1.00
263_R	413_G	0.649	1.00
32_A	316_A	0.648	1.00
121_G	124_Y	0.647	1.00
436_A	439_G	0.647	1.00
222_A	226_V	0.647	1.00
241_F	248_E	0.644	1.00
408_S	412_A	0.644	1.00
288_I	434_A	0.643	1.00
394_L	397_G	0.643	1.00
361_W	364_E	0.643	1.00
390_R	394_L	0.641	1.00
100_Q	104_A	0.640	1.00
148_M	152_A	0.639	1.00
56_Y	60_A	0.637	1.00
161_F	233_F	0.637	1.00
140_V	143_P	0.637	1.00
152_A	155_L	0.637	1.00
405_Y	461_A	0.634	1.00
334_P	337_A	0.633	1.00
421_I	460_I	0.632	1.00
103_Y	107_Q	0.629	1.00
53_L	218_I	0.627	1.00
268_G	272_S	0.627	1.00
235_V	239_I	0.627	1.00
313_P	351_V	0.626	1.00
41_F	44_A	0.626	1.00
295_H	298_A	0.625	1.00
45_Y	184_S	0.624	1.00
89_V	101_A	0.623	1.00
40_L	44_A	0.623	1.00
364_E	382_I	0.623	1.00
63_A	144_A	0.622	1.00
317_I	348_L	0.622	1.00
267_I	415_T	0.622	1.00
86_S	166_A	0.622	1.00
48_A	52_W	0.621	1.00
27_P	336_R	0.618	1.00
351_V	355_L	0.618	1.00
363_P	367_V	0.617	1.00
87_V	267_I	0.616	1.00
327_Q	331_A	0.616	1.00
311_F	399_I	0.616	1.00
87_V	326_G	0.614	1.00
321_V	325_T	0.613	1.00
329_V	334_P	0.609	1.00
220_G	224_A	0.608	1.00
259_S	263_R	0.606	1.00
371_V	379_A	0.603	1.00
58_T	298_A	0.603	1.00
164_F	237_L	0.600	1.00
117_L	121_G	0.599	1.00
152_A	156_A	0.598	1.00
60_A	217_G	0.598	1.00
81_I	272_S	0.597	1.00
61_L	371_V	0.595	1.00
431_F	435_W	0.594	1.00
429_I	433_L	0.593	1.00
322_E	410_R	0.593	1.00
197_F	216_L	0.592	1.00
310_V	355_L	0.590	1.00
269_L	272_S	0.590	1.00
154_G	229_R	0.589	1.00
60_A	63_A	0.589	1.00
460_I	463_A	0.588	1.00
45_Y	229_R	0.588	1.00
149_Q	219_Q	0.587	1.00
95_A	332_G	0.585	1.00
195_L	221_A	0.584	1.00
347_M	350_G	0.584	1.00
61_L	302_I	0.582	1.00
345_A	349_F	0.582	1.00
182_F	185_V	0.580	1.00
183_G	186_V	0.578	1.00
314_A	400_G	0.577	1.00
165_I	169_R	0.577	1.00
187_L	227_F	0.577	1.00
228_S	231_L	0.575	1.00
430_R	434_A	0.574	1.00
356_G	397_G	0.574	1.00
23_R	27_P	0.573	1.00
28_L	32_A	0.573	1.00
349_F	401_I	0.572	1.00
349_F	397_G	0.571	1.00
405_Y	462_Y	0.571	1.00
233_F	237_L	0.569	1.00
44_A	185_V	0.569	1.00
358_I	362_Y	0.569	1.00
415_T	419_A	0.568	1.00
157_A	226_V	0.567	1.00
448_L	452_V	0.565	1.00
80_G	322_E	0.565	1.00
68_F	72_F	0.564	1.00
97_K	103_Y	0.563	1.00
127_V	131_L	0.563	1.00
422_S	425_T	0.562	1.00
116_S	156_A	0.561	1.00
131_L	136_A	0.561	1.00
187_L	190_V	0.560	1.00
116_S	152_A	0.560	1.00
80_G	272_S	0.559	1.00
239_I	243_G	0.558	1.00
141_L	144_A	0.558	1.00
285_L	446_I	0.558	1.00
62_A	65_S	0.558	1.00
106_S	251_A	0.557	1.00
342_R	465_Y	0.554	1.00
371_V	382_I	0.554	1.00
195_L	223_I	0.552	1.00
299_A	447_W	0.552	1.00
106_S	110_T	0.552	1.00
307_F	392_V	0.550	1.00
146_S	150_V	0.549	1.00
156_A	230_A	0.548	1.00
180_V	232_A	0.548	1.00
161_F	165_I	0.547	1.00
345_A	405_Y	0.547	1.00
393_A	397_G	0.547	1.00
24_I	339_R	0.546	1.00
296_I	299_A	0.546	1.00
140_V	294_D	0.545	1.00
124_Y	153_L	0.544	1.00
281_S	426_L	0.541	1.00
66_F	144_A	0.540	1.00
112_S	116_S	0.540	1.00
324_M	328_N	0.539	1.00
409_F	414_K	0.536	1.00
456_I	460_I	0.534	1.00
64_I	147_Y	0.534	1.00
117_L	120_G	0.532	1.00
292_F	296_I	0.530	1.00
123_G	127_V	0.530	1.00
438_I	446_I	0.530	1.00
74_L	155_L	0.530	1.00
430_R	453_S	0.529	1.00
322_E	407_G	0.529	1.00
425_T	460_I	0.529	1.00
387_Q	390_R	0.529	1.00
196_I	224_A	0.527	1.00
147_Y	221_A	0.526	1.00
402_A	457_G	0.526	1.00
284_L	287_F	0.525	1.00
113_V	116_S	0.524	1.00
433_L	436_A	0.524	1.00
116_S	120_G	0.523	1.00
22_G	25_G	0.523	1.00
166_A	169_R	0.523	1.00
107_Q	111_F	0.523	1.00
363_P	393_A	0.523	1.00
224_A	228_S	0.523	1.00
46_N	151_V	0.523	1.00
405_Y	458_A	0.523	1.00
51_F	370_F	0.522	1.00
401_I	462_Y	0.521	1.00
24_I	343_L	0.521	1.00
48_A	51_F	0.521	1.00
169_R	174_T	0.520	1.00
451_A	455_V	0.519	1.00
285_L	434_A	0.519	1.00
295_H	378_S	0.518	0.99
381_V	385_G	0.518	0.99
134_V	283_N	0.517	0.99
294_D	298_A	0.516	0.99
124_Y	152_A	0.516	0.99
56_Y	193_P	0.516	0.99
246_G	249_I	0.514	0.99
341_A	345_A	0.513	0.99
188_N	224_A	0.513	0.99
83_V	319_R	0.513	0.99
288_I	446_I	0.513	0.99
277_G	419_A	0.513	0.99
432_P	435_W	0.512	0.99
434_A	446_I	0.512	0.99
295_H	381_V	0.510	0.99
107_Q	260_Y	0.509	0.99
145_T	148_M	0.507	0.99
241_F	244_T	0.506	0.99
303_G	389_L	0.506	0.99
28_L	347_M	0.506	0.99
89_V	104_A	0.505	0.99
168_M	171_Y	0.505	0.99
359_V	366_I	0.503	0.99
168_M	239_I	0.503	0.99
96_G	331_A	0.503	0.99
288_I	292_F	0.502	0.99
189_I	193_P	0.502	0.99
393_A	396_F	0.500	0.99
342_R	345_A	0.500	0.99

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3mktA	1	0.913	100	0.334	Contact Map
4lz6A	1	0.8988	100	0.342	Contact Map
4humA	1	0.9211	100	0.344	Contact Map
3w4tA	1	0.8907	100	0.384	Contact Map
3wdoA	1	0.8239	96	0.921	Contact Map
4j05A	3	0.8158	95.6	0.923	Contact Map
1pw4A	1	0.836	94.8	0.927	Contact Map
4ikvA	1	0.8441	94.2	0.929	Contact Map
4w6vA	1	0.8016	93.8	0.93	Contact Map
4tphA	2	0.7733	93.4	0.931	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0114 seconds.