Q9HR83 - HALSA - GREMLIN Contacts

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Q9HR83 - Uncharacterized protein

UniProt:	Q9HR83	Sequences: MPHDRRSYLRTSSAVIASLLAASTPTSAADTPPEWDPDTVYTDGDKATFDGYVWEAKWWTKGDKPGADEWGPWTQRRPVDGSPGGPTAAFTVTDTTVEPGTAVTVDAGDTTGSVDSYEWAFGDGTTAAGVTASHTYDAAGEYTIELTVTTGDGTTDTATQQITATTSPGDDEFKVVGYYPSWKGTDDYDFYPADVPFDQVTDVLYAFLDVQPDGTVVLPDSDVDHESLLASFASLKQDRAADTRLKLSIGGWGLSPGFEDAAADQASRERFATTAVDLMRTYDFDGIDVDWEHPGPRRGKCECGSAQGPANHVALLETVRDRLNDAEVEDGRTYDLSVANGGSDWNAALINHREVAAVVDDIYMMAYDFTGVWHGTAGLNAPIYGTPPDYPPSGDAQQYTLETTLTIWKEQGYWVDWMEWEDHGDPVDDPGTLVLGMPFYGRGCNVENGIWDTFSLSEWQQGDPKYQNDVIPPGTWNDLRGPDDANTGAFDYGDLAANYEGADAWTKQRNEQGGVPYLWNDSEGVFISYDDPTSIAAKVELAVAEDLGGVMIWELSQDYDGTLLETINQHTP	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	572 (444)
Sequences:	586 (361)
Seq/√Len:	17.1

HALSA - Q9HR83 Q9HR84

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
402_E	541_L	6.970	1.00
120_A	125_T	4.976	1.00
101_T	105_V	3.872	1.00
177_G	552_I	3.671	1.00
381_A	438_P	3.577	1.00
516_P	531_D	3.485	1.00
111_T	154_T	3.254	0.99
265_Q	269_E	3.211	0.99
126_T	129_G	3.126	0.99
129_G	137_D	3.060	0.99
134_H	137_D	2.985	0.99
273_T	322_R	2.931	0.98
132_A	136_Y	2.910	0.98
142_Y	146_L	2.907	0.98
111_T	114_V	2.751	0.98
126_T	134_H	2.640	0.97
136_Y	144_I	2.510	0.96
275_A	279_M	2.484	0.96
272_A	318_T	2.484	0.96
483_D	486_N	2.435	0.95
179_Y	183_K	2.416	0.95
150_T	153_G	2.374	0.94
480_R	487_T	2.269	0.93
402_E	406_T	2.257	0.92
316_L	359_V	2.200	0.91
204_L	363_Y	2.197	0.91
100_G	105_V	2.170	0.91
132_A	137_D	2.150	0.90
159_T	164_A	2.145	0.90
364_M	405_L	2.096	0.89
516_P	534_S	2.093	0.89
379_L	510_N	2.053	0.88
82_S	154_T	2.010	0.87
483_D	490_F	2.002	0.87
384_Y	402_E	1.995	0.87
89_A	92_V	1.995	0.87
140_G	164_A	1.984	0.86
220_D	223_V	1.968	0.86
230_A	234_S	1.940	0.85
148_V	152_D	1.920	0.85
107_A	150_T	1.918	0.85
280_R	330_D	1.918	0.85
109_D	112_G	1.899	0.84
97_V	100_G	1.885	0.83
107_A	117_Y	1.884	0.83
356_A	362_I	1.883	0.83
433_L	548_G	1.867	0.83
150_T	154_T	1.858	0.83
140_G	144_I	1.843	0.82
117_Y	146_L	1.831	0.82
139_A	142_Y	1.825	0.81
437_M	539_V	1.821	0.81
196_P	239_R	1.810	0.81
127_A	137_D	1.801	0.80
352_H	425_D	1.789	0.80
127_A	134_H	1.772	0.79
367_Y	436_G	1.748	0.78
275_A	287_I	1.737	0.78
120_A	123_D	1.735	0.78
431_G	548_G	1.734	0.78
370_T	389_D	1.723	0.77
110_T	154_T	1.682	0.76
142_Y	150_T	1.648	0.74
89_A	93_T	1.647	0.74
439_F	564_L	1.637	0.74
149_T	159_T	1.622	0.73
470_V	476_W	1.620	0.73
83_P	111_T	1.598	0.72
102_A	105_V	1.594	0.71
351_N	517_Y	1.589	0.71
317_E	358_V	1.584	0.71
320_R	324_N	1.581	0.71
540_E	544_A	1.577	0.71
157_T	166_T	1.569	0.70
116_S	119_W	1.543	0.69
378_G	381_A	1.533	0.68
179_Y	358_V	1.526	0.68
493_G	496_A	1.522	0.68
293_H	365_M	1.515	0.67
356_A	426_P	1.512	0.67
262_A	315_L	1.503	0.67
195_V	555_L	1.503	0.67
202_D	246_K	1.500	0.67
507_K	531_D	1.493	0.66
339_A	365_M	1.492	0.66
83_P	154_T	1.480	0.66
140_G	146_L	1.467	0.65
141_E	165_T	1.455	0.64
90_F	140_G	1.454	0.64
208_L	247_L	1.452	0.64
98_E	101_T	1.443	0.64
108_G	132_A	1.437	0.63
518_L	526_F	1.432	0.63
141_E	161_Q	1.426	0.63
279_M	287_I	1.419	0.62
383_I	401_L	1.418	0.62
89_A	152_D	1.415	0.62
202_D	244_R	1.410	0.62
121_F	146_L	1.387	0.60
365_M	368_D	1.386	0.60
146_L	150_T	1.385	0.60
110_T	114_V	1.384	0.60
401_L	435_L	1.383	0.60
277_D	281_T	1.382	0.60
289_V	319_V	1.380	0.60
340_N	408_W	1.377	0.60
120_A	148_V	1.376	0.60
167_S	170_D	1.374	0.60
205_Y	336_L	1.371	0.59
354_E	357_A	1.371	0.59
194_D	198_D	1.370	0.59
119_W	146_L	1.369	0.59
90_F	105_V	1.367	0.59
472_P	475_T	1.367	0.59
309_P	313_V	1.364	0.59
156_D	159_T	1.362	0.59
129_G	134_H	1.362	0.59
449_G	522_S	1.360	0.59
491_D	494_D	1.360	0.59
83_P	87_T	1.350	0.58
379_L	513_G	1.340	0.58
143_T	161_Q	1.338	0.58
441_G	529_Y	1.332	0.57
483_D	489_A	1.332	0.57
107_A	120_A	1.327	0.57
181_S	224_D	1.322	0.57
199_Q	565_E	1.318	0.56
293_H	339_A	1.317	0.56
143_T	163_T	1.307	0.56
444_C	447_E	1.301	0.55
166_T	169_G	1.300	0.55
351_N	354_E	1.299	0.55
296_P	341_G	1.296	0.55
268_R	291_W	1.294	0.55
142_Y	162_I	1.294	0.55
293_H	366_A	1.291	0.55
92_V	116_S	1.288	0.55
207_F	248_S	1.281	0.54
282_Y	319_V	1.272	0.54
117_Y	122_G	1.270	0.54
87_T	433_L	1.241	0.52
117_Y	144_I	1.239	0.52
126_T	137_D	1.237	0.52
102_A	163_T	1.220	0.51
103_V	156_D	1.216	0.50
208_L	249_I	1.214	0.50
119_W	134_H	1.214	0.50
151_G	154_T	1.214	0.50
178_Y	288_D	1.212	0.50
530_D	538_K	1.210	0.50
505_W	518_L	1.205	0.50
142_Y	148_V	1.204	0.50
97_V	106_D	1.200	0.49
95_T	161_Q	1.195	0.49
318_T	322_R	1.195	0.49
289_V	316_L	1.194	0.49
174_K	548_G	1.194	0.49
207_F	339_A	1.192	0.49
252_W	294_P	1.189	0.49
263_A	305_S	1.188	0.49
89_A	117_Y	1.187	0.49
97_V	105_V	1.186	0.48
99_P	105_V	1.183	0.48
509_R	534_S	1.182	0.48
128_A	131_T	1.167	0.47
177_G	555_L	1.162	0.47
405_L	409_K	1.162	0.47
93_T	106_D	1.160	0.47
146_L	156_D	1.149	0.46
379_L	515_V	1.148	0.46
133_S	317_E	1.147	0.46
111_T	150_T	1.140	0.46
289_V	359_V	1.138	0.46
102_A	106_D	1.136	0.45
127_A	164_A	1.136	0.45
269_E	322_R	1.133	0.45
175_V	513_G	1.132	0.45
484_D	494_D	1.131	0.45
427_V	546_D	1.124	0.45
112_G	152_D	1.122	0.45
484_D	489_A	1.121	0.45
89_A	140_G	1.119	0.44
120_A	158_A	1.118	0.44
264_D	311_N	1.116	0.44
301_C	304_G	1.115	0.44
96_T	105_V	1.113	0.44
111_T	151_G	1.107	0.44
485_A	490_F	1.107	0.44
110_T	113_S	1.105	0.44
312_H	338_V	1.103	0.44
130_V	137_D	1.103	0.44
255_S	294_P	1.103	0.44
131_T	137_D	1.102	0.43
126_T	136_Y	1.100	0.43
103_V	108_G	1.096	0.43
252_W	371_G	1.095	0.43
89_A	149_T	1.093	0.43
115_D	146_L	1.092	0.43
165_T	168_P	1.090	0.43
205_Y	558_D	1.088	0.43
253_G	442_R	1.086	0.43
100_G	106_D	1.086	0.43
203_V	316_L	1.084	0.42
99_P	131_T	1.082	0.42
437_M	567_I	1.075	0.42
105_V	148_V	1.067	0.41
110_T	139_A	1.067	0.41
135_T	266_A	1.059	0.41
302_E	305_S	1.051	0.40
559_Y	562_T	1.047	0.40
360_D	367_Y	1.046	0.40
147_T	155_T	1.040	0.40
105_V	146_L	1.038	0.40
221_S	224_D	1.038	0.40
112_G	154_T	1.035	0.40
84_G	92_V	1.035	0.40
98_E	103_V	1.026	0.39
89_A	146_L	1.025	0.39
495_L	499_Y	1.024	0.39
129_G	136_Y	1.023	0.39
138_A	144_I	1.022	0.39
182_W	371_G	1.020	0.39
115_D	151_G	1.017	0.39
219_P	223_V	1.015	0.38
505_W	520_N	1.015	0.38
127_A	133_S	1.013	0.38
339_A	366_A	1.010	0.38
160_Q	164_A	1.010	0.38
178_Y	251_G	1.008	0.38
252_W	255_S	1.008	0.38
98_E	105_V	1.004	0.38
103_V	119_W	1.001	0.38
131_T	135_T	1.000	0.38
216_V	275_A	1.000	0.38
484_D	490_F	0.998	0.37
174_K	434_V	0.997	0.37
86_P	99_P	0.996	0.37
117_Y	150_T	0.994	0.37
205_Y	236_K	0.992	0.37
196_P	289_V	0.990	0.37
531_D	551_M	0.989	0.37
152_D	164_A	0.975	0.36
310_A	314_A	0.975	0.36
142_Y	152_D	0.970	0.36
511_E	537_A	0.968	0.36
511_E	514_G	0.964	0.36
114_V	154_T	0.963	0.36
483_D	491_D	0.962	0.35
196_P	240_A	0.962	0.35
89_A	128_A	0.961	0.35
121_F	136_Y	0.961	0.35
285_D	294_P	0.960	0.35
219_P	224_D	0.957	0.35
128_A	135_T	0.955	0.35
405_L	435_L	0.951	0.35
157_T	160_Q	0.950	0.35
139_A	163_T	0.949	0.35
350_I	362_I	0.949	0.35
305_S	308_G	0.949	0.35
255_S	291_W	0.948	0.35
509_R	514_G	0.944	0.34
195_V	400_T	0.942	0.34
111_T	147_T	0.940	0.34
510_N	515_V	0.937	0.34
252_W	293_H	0.934	0.34
123_D	545_E	0.932	0.34
113_S	117_Y	0.931	0.34
130_V	134_H	0.926	0.34
121_F	144_I	0.925	0.33
207_F	558_D	0.922	0.33
203_V	405_L	0.921	0.33
405_L	433_L	0.918	0.33
359_V	385_G	0.915	0.33
316_L	358_V	0.912	0.33
184_G	223_V	0.910	0.33
105_V	121_F	0.901	0.32
82_S	147_T	0.900	0.32
138_A	141_E	0.900	0.32
130_V	136_Y	0.899	0.32
293_H	400_T	0.898	0.32
82_S	114_V	0.896	0.32
114_V	132_A	0.894	0.32
82_S	118_E	0.893	0.32
153_G	164_A	0.891	0.32
369_F	404_T	0.889	0.32
176_V	551_M	0.889	0.32
117_Y	166_T	0.887	0.31
147_T	160_Q	0.884	0.31
81_G	84_G	0.882	0.31
98_E	108_G	0.881	0.31
542_A	550_V	0.878	0.31
117_Y	120_A	0.878	0.31
219_P	254_L	0.878	0.31
116_S	122_G	0.875	0.31
214_G	278_L	0.873	0.31
86_P	111_T	0.871	0.31
131_T	136_Y	0.871	0.31
89_A	119_W	0.867	0.30
102_A	487_T	0.866	0.30
148_V	160_Q	0.866	0.30
105_V	118_E	0.864	0.30
439_F	443_G	0.859	0.30
117_Y	142_Y	0.858	0.30
89_A	144_I	0.858	0.30
207_F	288_D	0.858	0.30
110_T	118_E	0.857	0.30
474_G	480_R	0.855	0.30
219_P	225_H	0.855	0.30
425_D	432_T	0.855	0.30
182_W	192_P	0.854	0.30
107_A	146_L	0.853	0.30
368_D	442_R	0.851	0.30
146_L	164_A	0.845	0.29
523_E	526_F	0.845	0.29
140_G	159_T	0.839	0.29
438_P	551_M	0.839	0.29
329_E	332_R	0.839	0.29
272_A	319_V	0.839	0.29
89_A	116_S	0.839	0.29
150_T	156_D	0.837	0.29
197_F	243_T	0.836	0.29
222_D	226_E	0.835	0.29
227_S	241_A	0.832	0.29
221_S	226_E	0.831	0.29
343_S	346_N	0.828	0.28
341_G	510_N	0.821	0.28
251_G	288_D	0.821	0.28
113_S	120_A	0.819	0.28
200_V	382_P	0.818	0.28
85_G	162_I	0.818	0.28
99_P	141_E	0.814	0.28
259_E	519_W	0.813	0.28
82_S	92_V	0.810	0.28
345_W	348_A	0.807	0.27
124_G	130_V	0.806	0.27
111_T	433_L	0.806	0.27
117_Y	121_F	0.806	0.27
338_V	346_N	0.806	0.27
536_A	540_E	0.804	0.27
374_H	505_W	0.804	0.27
175_V	542_A	0.803	0.27
134_H	144_I	0.803	0.27
280_R	319_V	0.801	0.27
103_V	106_D	0.800	0.27
514_G	537_A	0.795	0.27
255_S	268_R	0.794	0.27
164_A	435_L	0.793	0.27
480_R	484_D	0.791	0.27
120_A	134_H	0.788	0.27
264_D	267_S	0.786	0.26
311_N	315_L	0.785	0.26
487_T	490_F	0.785	0.26
101_T	107_A	0.785	0.26
448_N	451_W	0.783	0.26
360_D	365_M	0.783	0.26
360_D	440_Y	0.783	0.26
116_S	137_D	0.782	0.26
252_W	368_D	0.780	0.26
293_H	374_H	0.780	0.26
432_T	517_Y	0.778	0.26
406_T	541_L	0.775	0.26
119_W	140_G	0.773	0.26
384_Y	517_Y	0.773	0.26
127_A	141_E	0.772	0.26
255_S	488_G	0.772	0.26
105_V	136_Y	0.771	0.26
565_E	568_N	0.770	0.26
110_T	116_S	0.769	0.26
205_Y	284_F	0.769	0.26
125_T	128_A	0.769	0.26
358_V	365_M	0.768	0.26
84_G	98_E	0.768	0.26
471_I	475_T	0.768	0.26
356_A	365_M	0.766	0.26
158_A	162_I	0.763	0.25
117_Y	136_Y	0.763	0.25
159_T	163_T	0.760	0.25
114_V	152_D	0.757	0.25
95_T	98_E	0.756	0.25
130_V	133_S	0.754	0.25
146_L	154_T	0.753	0.25
188_Y	491_D	0.750	0.25
208_L	438_P	0.749	0.25
147_T	161_Q	0.749	0.25
498_N	523_E	0.748	0.25
291_W	294_P	0.743	0.25
227_S	230_A	0.742	0.24
126_T	131_T	0.742	0.24
249_I	287_I	0.736	0.24
329_E	426_P	0.736	0.24
369_F	399_Y	0.734	0.24
274_T	443_G	0.734	0.24
223_V	226_E	0.731	0.24
89_A	98_E	0.730	0.24
146_L	162_I	0.730	0.24
128_A	160_Q	0.730	0.24
129_G	133_S	0.730	0.24
80_D	123_D	0.729	0.24
263_A	307_Q	0.729	0.24
220_D	236_K	0.728	0.24
490_F	494_D	0.728	0.24
443_G	554_E	0.726	0.24
136_Y	142_Y	0.726	0.24
86_P	118_E	0.721	0.24
100_G	138_A	0.720	0.24
197_F	235_L	0.715	0.23
101_T	122_G	0.715	0.23
236_K	558_D	0.714	0.23
139_A	149_T	0.713	0.23
398_Q	407_I	0.711	0.23
246_K	363_Y	0.709	0.23
101_T	106_D	0.708	0.23
79_V	91_T	0.707	0.23
214_G	217_V	0.707	0.23
446_V	475_T	0.704	0.23
242_D	332_R	0.704	0.23
139_A	145_E	0.703	0.23
106_D	129_G	0.702	0.23
121_F	124_G	0.701	0.23
386_T	510_N	0.700	0.23
113_S	116_S	0.700	0.23
104_T	159_T	0.699	0.23
84_G	93_T	0.699	0.23
116_S	125_T	0.696	0.22
272_A	322_R	0.695	0.22
259_E	302_E	0.695	0.22
144_I	148_V	0.693	0.22
103_V	107_A	0.692	0.22
251_G	371_G	0.689	0.22
380_N	516_P	0.689	0.22
116_S	120_A	0.687	0.22
108_G	163_T	0.687	0.22
342_G	364_M	0.687	0.22
92_V	160_Q	0.687	0.22
249_I	272_A	0.687	0.22
246_K	335_D	0.686	0.22
405_L	534_S	0.686	0.22
149_T	153_G	0.686	0.22
90_F	100_G	0.685	0.22
298_R	304_G	0.685	0.22
100_G	146_L	0.684	0.22
500_E	503_D	0.683	0.22
125_T	138_A	0.683	0.22
250_G	371_G	0.681	0.22
81_G	93_T	0.680	0.22
220_D	224_D	0.676	0.22
470_V	474_G	0.676	0.22
104_T	522_S	0.675	0.22
108_G	156_D	0.675	0.22
80_D	115_D	0.675	0.22
180_P	554_E	0.675	0.22
188_Y	483_D	0.675	0.22
127_A	131_T	0.674	0.22
208_L	278_L	0.673	0.22
120_A	147_T	0.673	0.22
384_Y	554_E	0.672	0.22
111_T	120_A	0.672	0.22
188_Y	298_R	0.671	0.21
112_G	151_G	0.670	0.21
492_Y	517_Y	0.668	0.21
83_P	90_F	0.667	0.21
114_V	118_E	0.667	0.21
142_Y	153_G	0.667	0.21
109_D	119_W	0.666	0.21
229_L	232_F	0.666	0.21
241_A	284_F	0.665	0.21
302_E	438_P	0.665	0.21
88_A	382_P	0.665	0.21
145_E	156_D	0.664	0.21
91_T	116_S	0.664	0.21
182_W	205_Y	0.663	0.21
476_W	479_L	0.662	0.21
279_M	319_V	0.661	0.21
119_W	142_Y	0.660	0.21
157_T	161_Q	0.660	0.21
255_S	368_D	0.659	0.21
154_T	158_A	0.659	0.21
111_T	310_A	0.657	0.21
99_P	146_L	0.657	0.21
99_P	159_T	0.657	0.21
135_T	433_L	0.656	0.21
98_E	137_D	0.656	0.21
132_A	317_E	0.655	0.21
127_A	162_I	0.654	0.21
113_S	154_T	0.654	0.21
387_P	568_N	0.654	0.21
192_P	203_V	0.653	0.21
310_A	544_A	0.652	0.21
96_T	101_T	0.652	0.21
124_G	131_T	0.652	0.21
96_T	128_A	0.651	0.21
376_T	395_D	0.649	0.21
187_D	316_L	0.648	0.21
122_G	141_E	0.647	0.21
119_W	123_D	0.647	0.21
507_K	518_L	0.646	0.20
207_F	294_P	0.646	0.20
189_D	406_T	0.645	0.20
100_G	112_G	0.645	0.20
92_V	101_T	0.644	0.20
273_T	522_S	0.644	0.20
103_V	134_H	0.644	0.20
494_D	498_N	0.643	0.20
182_W	190_F	0.643	0.20
105_V	108_G	0.640	0.20
528_S	538_K	0.639	0.20
230_A	450_I	0.639	0.20
201_T	553_W	0.639	0.20
507_K	516_P	0.639	0.20
92_V	102_A	0.636	0.20
82_S	86_P	0.636	0.20
119_W	144_I	0.634	0.20
363_Y	514_G	0.633	0.20
438_P	555_L	0.632	0.20
114_V	150_T	0.632	0.20
182_W	252_W	0.631	0.20
90_F	93_T	0.630	0.20
139_A	155_T	0.628	0.20
381_A	516_P	0.624	0.20
504_A	508_Q	0.624	0.20
310_A	351_N	0.624	0.20
357_A	544_A	0.623	0.20
93_T	100_G	0.622	0.20
486_N	490_F	0.622	0.20
202_D	335_D	0.622	0.20
82_S	141_E	0.622	0.20
249_I	275_A	0.621	0.20
95_T	164_A	0.620	0.19
273_T	277_D	0.619	0.19
242_D	337_S	0.619	0.19
91_T	137_D	0.618	0.19
85_G	98_E	0.615	0.19
345_W	399_Y	0.614	0.19
237_Q	473_P	0.614	0.19
285_D	441_G	0.614	0.19
88_A	107_A	0.613	0.19
134_H	146_L	0.612	0.19
257_G	380_N	0.612	0.19
161_Q	166_T	0.611	0.19
245_L	530_D	0.610	0.19
372_V	554_E	0.609	0.19
174_K	361_D	0.609	0.19
209_D	254_L	0.608	0.19
367_Y	371_G	0.606	0.19
269_E	273_T	0.606	0.19
261_A	271_F	0.604	0.19
385_G	519_W	0.604	0.19
108_G	112_G	0.603	0.19
92_V	95_T	0.602	0.19
111_T	122_G	0.601	0.19
434_V	520_N	0.596	0.19
381_A	407_I	0.594	0.19
114_V	147_T	0.591	0.18
88_A	117_Y	0.589	0.18
85_G	128_A	0.587	0.18
89_A	157_T	0.587	0.18
205_Y	551_M	0.587	0.18
85_G	114_V	0.587	0.18
241_A	447_E	0.585	0.18
249_I	278_L	0.585	0.18
107_A	148_V	0.584	0.18
86_P	109_D	0.579	0.18
160_Q	545_E	0.578	0.18
193_A	231_S	0.577	0.18
481_G	491_D	0.577	0.18
484_D	488_G	0.577	0.18
240_A	243_T	0.576	0.18
83_P	89_A	0.574	0.18
518_L	531_D	0.574	0.18
341_G	350_I	0.573	0.18
96_T	163_T	0.572	0.18
142_Y	164_A	0.569	0.18
178_Y	250_G	0.567	0.18
127_A	544_A	0.567	0.18
311_N	432_T	0.565	0.17
506_T	522_S	0.563	0.17
99_P	124_G	0.562	0.17
104_T	156_D	0.562	0.17
95_T	125_T	0.561	0.17
384_Y	541_L	0.561	0.17
316_L	355_V	0.561	0.17
440_Y	553_W	0.560	0.17
379_L	535_I	0.560	0.17
119_W	159_T	0.559	0.17
112_G	123_D	0.559	0.17
372_V	557_Q	0.559	0.17
374_H	519_W	0.559	0.17
195_V	264_D	0.558	0.17
81_G	115_D	0.557	0.17
258_F	342_G	0.556	0.17
120_A	124_G	0.554	0.17
440_Y	549_G	0.553	0.17
105_V	142_Y	0.553	0.17
106_D	162_I	0.553	0.17
269_E	318_T	0.552	0.17
178_Y	339_A	0.552	0.17
492_Y	496_A	0.551	0.17
85_G	101_T	0.550	0.17
147_T	154_T	0.550	0.17
365_M	373_W	0.547	0.17
89_A	130_V	0.546	0.17
267_S	338_V	0.546	0.17
176_V	567_I	0.546	0.17
96_T	104_T	0.546	0.17
173_F	543_V	0.545	0.17
275_A	319_V	0.544	0.17
516_P	527_I	0.543	0.17
378_G	448_N	0.543	0.17
532_P	546_D	0.540	0.17
82_S	85_G	0.540	0.17
374_H	387_P	0.539	0.17
125_T	147_T	0.539	0.17
344_D	348_A	0.538	0.17
247_L	355_V	0.537	0.17
116_S	144_I	0.537	0.17
363_Y	434_V	0.533	0.16
470_V	475_T	0.533	0.16
362_I	409_K	0.532	0.16
119_W	133_S	0.531	0.16
207_F	252_W	0.531	0.16
406_T	545_E	0.531	0.16
86_P	150_T	0.530	0.16
264_D	268_R	0.530	0.16
82_S	91_T	0.529	0.16
188_Y	425_D	0.529	0.16
181_S	343_S	0.527	0.16
117_Y	133_S	0.527	0.16
116_S	138_A	0.526	0.16
95_T	124_G	0.525	0.16
145_E	161_Q	0.525	0.16
95_T	160_Q	0.525	0.16
231_S	478_D	0.524	0.16
315_L	319_V	0.523	0.16
86_P	114_V	0.522	0.16
294_P	371_G	0.522	0.16
276_V	322_R	0.521	0.16
128_A	153_G	0.521	0.16
83_P	155_T	0.519	0.16
83_P	151_G	0.519	0.16
225_H	451_W	0.518	0.16
82_S	87_T	0.516	0.16
395_D	526_F	0.516	0.16
399_Y	402_E	0.514	0.16
153_G	156_D	0.512	0.16
359_V	362_I	0.512	0.16
252_W	488_G	0.510	0.16
139_A	159_T	0.509	0.16
404_T	531_D	0.508	0.16
197_F	231_S	0.508	0.16
294_P	368_D	0.507	0.16
360_D	424_G	0.507	0.16
241_A	444_C	0.506	0.16
112_G	119_W	0.506	0.16
485_A	491_D	0.505	0.16
105_V	109_D	0.505	0.16
211_Q	278_L	0.505	0.16
111_T	115_D	0.504	0.15
110_T	150_T	0.504	0.15
98_E	106_D	0.504	0.15
441_G	495_L	0.503	0.15
260_D	263_A	0.503	0.15
208_L	279_M	0.503	0.15
115_D	161_Q	0.502	0.15
337_S	363_Y	0.501	0.15
207_F	368_D	0.500	0.15
374_H	426_P	0.500	0.15

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3arxA	1	0.8339	100	0.361	Contact Map
1edqA	1	0.8147	100	0.368	Contact Map
1itxA	1	0.6556	100	0.416	Contact Map
4dwsA	1	0.7115	100	0.446	Contact Map
3oa5A	1	0.7238	100	0.449	Contact Map
1kfwA	1	0.6294	100	0.452	Contact Map
3w4rA	1	0.6294	100	0.453	Contact Map
1wb0A	2	0.6119	100	0.466	Contact Map
1w9pA	1	0.6049	100	0.467	Contact Map
3fy1A	1	0.6171	100	0.468	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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