GREMLIN Database
Q9HR80 - Uncharacterized protein
UniProt: Q9HR80 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 535 (500)
Sequences: 147 (116)
Seq/√Len: 5.2

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
11_L16_M3.8030.88
80_L260_A3.6810.86
23_R47_D3.5710.84
154_V298_V3.4090.81
388_N391_A3.3780.81
283_D523_M3.2750.79
344_G436_I3.2720.79
159_A335_F3.1410.76
429_Y519_H3.0380.73
86_L89_F2.9350.70
152_A493_T2.9120.70
300_Y515_A2.8140.67
498_A531_F2.8020.66
79_I120_V2.7810.66
505_A531_F2.7620.65
435_F511_G2.7010.63
135_V501_S2.6590.62
10_A82_S2.6350.61
370_F426_V2.5920.60
11_L415_R2.5840.60
416_D493_T2.5320.58
158_G237_L2.5150.57
13_R428_I2.4370.55
310_I344_G2.3970.54
95_E428_I2.3520.52
101_A417_R2.2760.50
293_V300_Y2.2710.50
322_A454_A2.2600.49
248_P257_P2.2460.49
154_V233_V2.2350.48
93_E368_T2.1820.47
503_L513_V2.1500.46
75_N528_Y2.1450.45
310_I442_L2.1350.45
57_L260_A2.1290.45
109_L121_T2.0880.44
71_E89_F2.0790.43
167_L451_P2.0700.43
428_I503_L2.0680.43
283_D376_T2.0620.43
89_F418_R2.0570.43
64_T69_L2.0440.42
156_V258_I2.0320.42
421_L434_V1.9870.40
161_F237_L1.9660.40
39_M69_L1.9490.39
6_A413_L1.9480.39
69_L406_E1.8990.38
128_L163_F1.8720.37
129_F359_W1.8690.37
160_T446_F1.8630.36
350_L414_E1.8570.36
22_L136_V1.8570.36
278_P529_T1.8430.36
366_A433_F1.8400.36
55_T218_P1.8370.36
89_F440_V1.8300.35
156_V393_S1.8250.35
291_F515_A1.8020.35
125_A402_I1.7870.34
315_P424_Y1.7790.34
119_Y389_A1.7790.34
153_F492_H1.7440.33
110_E490_F1.7290.32
362_R365_H1.7250.32
421_L509_G1.7150.32
482_K490_F1.7150.32
171_T322_A1.7140.32
119_Y428_I1.7080.32
106_S508_M1.7070.32
233_V254_V1.7060.32
311_E519_H1.6950.31
248_P404_A1.6930.31
10_A403_A1.6910.31
4_T35_A1.6700.31
330_A430_V1.6650.31
160_T500_C1.6580.30
116_A407_A1.6500.30
492_H497_Q1.6440.30
251_L255_S1.6430.30
7_F393_S1.6420.30
259_A292_V1.6200.29
90_L169_S1.6160.29
496_V513_V1.6150.29
72_F130_L1.6090.29
215_G292_V1.5930.29
347_T498_A1.5910.29
323_S392_A1.5830.28
84_S427_V1.5820.28
9_Y15_G1.5770.28
360_G389_A1.5570.28
431_S499_V1.5540.28
225_A526_V1.5510.28
16_M57_L1.5180.27
109_L431_S1.5180.27
73_T77_G1.5130.27
208_D225_A1.5040.26
23_R523_M1.4940.26
305_R520_A1.4930.26
356_D369_R1.4920.26
381_R385_L1.4920.26
108_F171_T1.4880.26
31_V168_D1.4740.26
58_E89_F1.4700.25
509_G528_Y1.4680.25
252_F263_L1.4640.25
42_A73_T1.4630.25
115_L495_L1.4620.25
128_L497_Q1.4580.25
314_V359_W1.4570.25
11_L121_T1.4570.25
11_L323_S1.4560.25
75_N486_Y1.4390.25
132_T398_P1.4330.25
112_L305_R1.4250.24
69_L90_L1.4230.24
479_T527_A1.4220.24
89_F508_M1.4180.24
282_D509_G1.4100.24
323_S490_F1.4040.24
336_G444_T1.3960.24
7_F486_Y1.3760.23
87_P363_I1.3680.23
5_V387_T1.3650.23
239_N481_A1.3600.23
116_A121_T1.3560.23
92_Q393_S1.3540.23
108_F123_L1.3540.23
69_L449_N1.3500.23
131_I430_V1.3490.23
161_F235_Y1.3490.23
416_D489_V1.3470.22
50_G426_V1.3440.22
289_T351_E1.3420.22
119_Y360_G1.3420.22
14_S353_T1.3390.22
373_R519_H1.3340.22
319_D352_R1.3290.22
135_V391_A1.3260.22
326_E360_G1.3210.22
36_A306_R1.3190.22
57_L77_G1.3130.22
288_A519_H1.3090.22
258_I499_V1.3090.22
254_V265_S1.3070.22
426_V438_I1.2980.21
257_P492_H1.2980.21
376_T523_M1.2980.21
434_V497_Q1.2930.21
6_A517_A1.2830.21
81_Q371_R1.2810.21
18_L239_N1.2780.21
91_K388_N1.2760.21
331_A334_S1.2660.21
296_F402_I1.2650.21
10_A417_R1.2650.21
370_F386_T1.2610.21
22_L405_N1.2560.20
381_R399_V1.2520.20
299_A391_A1.2510.20
14_S365_H1.2510.20
34_A132_T1.2490.20
428_I482_K1.2450.20
498_A524_L1.2450.20
406_E500_C1.2430.20
167_L499_V1.2390.20
344_G349_E1.2370.20
381_R417_R1.2320.20
365_H442_L1.2280.20
26_A392_A1.2260.20
5_V494_S1.2240.20
308_K428_I1.2240.20
79_I133_I1.2220.20
299_A354_W1.2200.20
43_V513_V1.2150.20
382_V523_M1.2090.19
167_L371_R1.2060.19
160_T286_V1.2020.19
304_R335_F1.1920.19
16_M316_D1.1850.19
59_R265_S1.1840.19
139_L398_P1.1820.19
108_F406_E1.1800.19
360_G429_Y1.1780.19
342_D519_H1.1760.19
306_R316_D1.1750.19
350_L522_V1.1740.19
126_G431_S1.1690.19
58_E341_G1.1670.19
14_S319_D1.1630.19
32_Y492_H1.1630.19
139_L449_N1.1610.18
346_L479_T1.1580.18
119_Y135_V1.1570.18
245_L522_V1.1550.18
72_F413_L1.1480.18
82_S349_E1.1400.18
338_T433_F1.1380.18
123_L430_V1.1360.18
4_T8_M1.1320.18
72_F169_S1.1260.18
75_N511_G1.1220.18
238_R522_V1.1170.18
167_L378_A1.1160.18
529_T532_L1.1140.18
280_A396_L1.1140.18
357_I363_I1.1110.18
329_M458_A1.1100.17
370_F376_T1.1080.17
67_D498_A1.1030.17
235_Y247_T1.0950.17
125_A356_D1.0930.17
108_F359_W1.0930.17
9_Y105_Q1.0920.17
402_I431_S1.0910.17
329_M426_V1.0890.17
407_A509_G1.0830.17
252_F383_V1.0820.17
61_G517_A1.0770.17
365_H370_F1.0770.17
69_L446_F1.0750.17
447_I503_L1.0740.17
121_T381_R1.0690.17
245_L267_W1.0680.17
252_F255_S1.0670.17
82_S415_R1.0660.17
165_V168_D1.0610.17
47_D156_V1.0570.17
519_H522_V1.0550.16
109_L119_Y1.0500.16
425_V496_V1.0490.16
127_P135_V1.0490.16
222_A513_V1.0470.16
156_V347_T1.0470.16
75_N393_S1.0440.16
128_L325_N1.0440.16
264_G292_V1.0430.16
32_Y105_Q1.0420.16
12_S209_A1.0410.16
18_L334_S1.0380.16
30_P261_V1.0360.16
40_A380_S1.0340.16
104_T316_D1.0320.16
159_A162_G1.0300.16
251_L292_V1.0250.16
67_D215_G1.0250.16
141_L398_P1.0250.16
152_A530_T1.0230.16
132_T500_C1.0210.16
70_A357_I1.0200.16
147_F428_I1.0190.16
42_A85_D1.0170.16
27_R487_S1.0150.16
120_V125_A1.0100.16
435_F519_H1.0100.16
176_G437_A1.0100.16
339_V446_F1.0080.16
426_V526_V1.0080.16
36_A105_Q1.0070.16
47_D142_G1.0050.16
183_S186_G1.0040.16
293_V336_G1.0040.16
32_Y417_R1.0000.16
437_A441_A1.0000.16
82_S417_R0.9990.15
56_A413_L0.9950.15
85_D529_T0.9920.15
154_V525_V0.9860.15
185_G219_E0.9850.15
7_F415_R0.9840.15
37_E110_E0.9830.15
148_L413_L0.9780.15
328_G518_K0.9760.15
73_T84_S0.9740.15
11_L81_Q0.9710.15
191_F455_A0.9700.15
434_V495_L0.9680.15
43_V167_L0.9680.15
81_Q329_M0.9670.15
55_T250_L0.9630.15
67_D345_A0.9610.15
299_A399_V0.9600.15
360_G431_S0.9590.15
116_A509_G0.9580.15
89_F427_V0.9570.15
334_S373_R0.9550.15
73_T132_T0.9500.15
89_F100_E0.9480.15
15_G323_S0.9480.15
406_E446_F0.9470.15
22_L354_W0.9450.15
233_V279_A0.9430.15
22_L25_L0.9430.15
45_D433_F0.9430.15
128_L434_V0.9400.14
436_I490_F0.9380.14
40_A490_F0.9380.14
39_M357_I0.9370.14
371_R374_V0.9340.14
11_L82_S0.9330.14
60_V86_L0.9320.14
318_L400_L0.9320.14
294_G298_V0.9310.14
29_Q72_F0.9280.14
309_A388_N0.9280.14
8_M173_A0.9270.14
101_A246_E0.9270.14
168_D493_T0.9260.14
107_Q498_A0.9260.14
62_S234_L0.9230.14
148_L399_V0.9220.14
131_I497_Q0.9220.14
21_V103_A0.9210.14
158_G335_F0.9200.14
15_G128_L0.9160.14
247_T498_A0.9100.14
113_A498_A0.9070.14
289_T380_S0.9050.14
105_Q257_P0.9050.14
310_I326_E0.9040.14
342_D429_Y0.9030.14
125_A430_V0.9020.14
85_D316_D0.8960.14
443_D454_A0.8960.14
153_F257_P0.8950.14
258_I274_G0.8890.14
393_S504_V0.8860.14
335_F515_A0.8850.14
445_I511_G0.8830.14
27_R459_G0.8830.14
166_Y364_E0.8790.14
125_A385_L0.8790.14
377_P386_T0.8790.14
150_L447_I0.8780.14
44_T79_I0.8750.13
147_F167_L0.8730.13
51_A158_G0.8710.13
294_G347_T0.8710.13
16_M252_F0.8710.13
125_A353_T0.8700.13
27_R309_A0.8700.13
14_S295_T0.8690.13
374_V430_V0.8680.13
7_F417_R0.8680.13
18_L372_D0.8670.13
207_A232_P0.8660.13
123_L315_P0.8660.13
373_R424_Y0.8650.13
85_D484_A0.8650.13
110_E158_G0.8640.13
394_G497_Q0.8620.13
32_Y50_G0.8610.13
185_G261_V0.8580.13
160_T510_A0.8580.13
118_A503_L0.8580.13
356_D434_V0.8560.13
129_F434_V0.8550.13
72_F428_I0.8540.13
293_V374_V0.8530.13
63_R355_A0.8500.13
85_D370_F0.8500.13
44_T251_L0.8460.13
278_P482_K0.8460.13
71_E521_T0.8440.13
116_A126_G0.8440.13
57_L522_V0.8430.13
26_A62_S0.8420.13
35_A75_N0.8420.13
370_F432_F0.8410.13
403_A496_V0.8400.13
113_A251_L0.8400.13
346_L415_R0.8400.13
151_T167_L0.8380.13
5_V288_A0.8380.13
95_E416_D0.8380.13
129_F315_P0.8370.13
149_R165_V0.8330.13
241_L523_M0.8320.13
410_S519_H0.8320.13
234_L300_Y0.8310.13
337_R498_A0.8300.13
7_F75_N0.8290.13
396_L493_T0.8270.13
335_F447_I0.8260.13
13_R421_L0.8260.13
454_A527_A0.8240.13
393_S453_G0.8230.13
339_V451_P0.8190.13
317_F429_Y0.8150.13
237_L480_A0.8120.13
168_D405_N0.8100.12
55_T452_T0.8100.12
57_L73_T0.8090.12
24_I414_E0.8050.12
250_L253_W0.8050.12
139_L499_V0.8030.12
77_G235_Y0.8020.12
160_T382_V0.7990.12
133_I300_Y0.7980.12
116_A317_F0.7980.12
87_P425_V0.7970.12
381_R416_D0.7960.12
20_E344_G0.7950.12
70_A334_S0.7950.12
45_D255_S0.7940.12
248_P323_S0.7930.12
357_I379_V0.7910.12
414_E509_G0.7900.12
508_M523_M0.7890.12
237_L484_A0.7880.12
311_E429_Y0.7880.12
136_V439_I0.7870.12
300_Y452_T0.7860.12
8_M35_A0.7850.12
44_T300_Y0.7850.12
265_S278_P0.7840.12
16_M159_A0.7840.12
63_R158_G0.7830.12
363_I423_T0.7820.12
447_I477_Q0.7820.12
121_T126_G0.7810.12
82_S255_S0.7810.12
79_I265_S0.7810.12
146_G487_S0.7770.12
391_A442_L0.7760.12
167_L376_T0.7760.12
431_S507_Q0.7750.12
93_E502_G0.7730.12
48_N331_A0.7730.12
325_N404_A0.7730.12
224_F227_S0.7720.12
32_Y255_S0.7710.12
142_G496_V0.7700.12
254_V285_L0.7700.12
287_H388_N0.7680.12
167_L266_Q0.7660.12
115_L437_A0.7660.12
61_G452_T0.7620.12
257_P497_Q0.7620.12
110_E323_S0.7610.12
351_E496_V0.7610.12
113_A319_D0.7600.12
4_T36_A0.7590.12
501_S505_A0.7590.12
83_G328_G0.7590.12
76_L353_T0.7580.12
15_G325_N0.7580.12
8_M21_V0.7570.12
362_R416_D0.7570.12
426_V445_I0.7570.12
309_A391_A0.7560.12
370_F381_R0.7550.12
230_L459_G0.7540.12
335_F533_L0.7540.12
161_F346_L0.7540.12
423_T441_A0.7520.12
15_G129_F0.7510.12
11_L109_L0.7510.12
216_S498_A0.7470.12
139_L425_V0.7460.12
335_F508_M0.7460.12
55_T512_S0.7430.12
12_S32_Y0.7410.12
71_E427_V0.7400.12
81_Q451_P0.7390.12
25_L503_L0.7380.11
258_I362_R0.7370.11
234_L291_F0.7360.11
162_G436_I0.7340.11
49_Y489_V0.7340.11
7_F437_A0.7330.11
315_P356_D0.7310.11
15_G434_V0.7300.11
438_I528_Y0.7280.11
9_Y42_A0.7270.11
85_D527_A0.7240.11
142_G396_L0.7230.11
49_Y311_E0.7220.11
436_I442_L0.7190.11
7_F322_A0.7170.11
289_T482_K0.7170.11
219_E239_N0.7170.11
25_L322_A0.7150.11
165_V399_V0.7140.11
363_I428_I0.7140.11
80_L354_W0.7140.11
178_P498_A0.7130.11
402_I417_R0.7130.11
95_E494_S0.7130.11
327_A402_I0.7100.11
57_L452_T0.7080.11
487_S531_F0.7080.11
40_A161_F0.7080.11
504_V517_A0.7060.11
35_A399_V0.7060.11
111_L501_S0.7060.11
385_L417_R0.7050.11
278_P285_L0.7050.11
334_S390_M0.7050.11
219_E225_A0.7040.11
256_C267_W0.7030.11
7_F324_T0.7020.11
39_M46_I0.7020.11
126_G402_I0.7020.11
271_L529_T0.7010.11
310_I438_I0.7000.11
46_I338_T0.7000.11
434_V509_G0.6990.11
235_Y479_T0.6990.11
356_D424_Y0.6980.11
319_D326_E0.6970.11
158_G316_D0.6970.11
314_V371_R0.6960.11
64_T533_L0.6920.11
350_L487_S0.6920.11
152_A173_A0.6910.11
511_G528_Y0.6890.11
380_S478_L0.6890.11
82_S497_Q0.6890.11
59_R533_L0.6880.11
359_W395_N0.6870.11
136_V150_L0.6870.11
407_A523_M0.6870.11
125_A511_G0.6870.11
14_S53_I0.6860.11
171_T323_S0.6840.11
381_R497_Q0.6830.11
247_T298_V0.6800.11
163_F490_F0.6780.11
104_T134_L0.6780.11
135_V309_A0.6780.11
17_P69_L0.6770.11
93_E171_T0.6760.11
47_D481_A0.6710.11
238_R309_A0.6710.11
237_L379_V0.6710.11
335_F440_V0.6690.11
81_Q339_V0.6690.11
384_A519_H0.6690.11
99_E225_A0.6680.11
241_L357_I0.6670.11
309_A365_H0.6660.11
160_T437_A0.6630.11
154_V289_T0.6620.11
20_E393_S0.6600.10
374_V378_A0.6600.10
296_F443_D0.6580.10
175_V244_V0.6570.10
375_N504_V0.6560.10
84_S295_T0.6540.10
7_F381_R0.6530.10
8_M36_A0.6520.10
169_S334_S0.6520.10
132_T174_T0.6520.10
39_M130_L0.6500.10
114_T451_P0.6490.10
238_R504_V0.6470.10
317_F435_F0.6470.10
139_L391_A0.6460.10
482_K519_H0.6460.10
93_E441_A0.6450.10
212_A263_L0.6450.10
69_L270_P0.6440.10
407_A511_G0.6410.10
163_F492_H0.6400.10
260_A278_P0.6400.10
342_D435_F0.6400.10
8_M54_I0.6400.10
148_L238_R0.6390.10
26_A163_F0.6390.10
100_E427_V0.6360.10
260_A415_R0.6350.10
240_P385_L0.6350.10
499_V515_A0.6340.10
281_Y447_I0.6330.10
292_V498_A0.6320.10
234_L522_V0.6320.10
258_I530_T0.6310.10
8_M69_L0.6300.10
5_V454_A0.6300.10
105_Q403_A0.6290.10
167_L335_F0.6280.10
115_L151_T0.6280.10
258_I298_V0.6270.10
7_F339_V0.6270.10
170_I303_A0.6260.10
366_A520_A0.6250.10
251_L260_A0.6250.10
75_N354_W0.6240.10
320_R352_R0.6240.10
149_R361_A0.6240.10
5_V498_A0.6220.10
58_E333_E0.6220.10
448_P452_T0.6210.10
170_I442_L0.6200.10
79_I256_C0.6180.10
224_F228_E0.6170.10
247_T250_L0.6170.10
401_R439_I0.6150.10
339_V527_A0.6140.10
414_E431_S0.6120.10
90_L133_I0.6120.10
142_G365_H0.6110.10
186_G298_V0.6100.10
256_C318_L0.6080.10
125_A129_F0.6060.10
315_P359_W0.6050.10
42_A414_E0.6050.10
28_N138_G0.6040.10
6_A352_R0.6040.10
86_L440_V0.6040.10
17_P92_Q0.6040.10
75_N453_G0.6030.10
189_S513_V0.6030.10
489_V492_H0.6000.10
36_A368_T0.5970.10
237_L368_T0.5960.10
388_N398_P0.5960.10
306_R484_A0.5920.10
23_R495_L0.5910.10
120_V403_A0.5910.10
160_T384_A0.5910.10
130_L133_I0.5910.10
138_G361_A0.5880.10
418_R499_V0.5880.10
290_V370_F0.5870.10
247_T260_A0.5870.10
349_E506_G0.5840.10
339_V379_V0.5800.10
320_R361_A0.5790.10
154_V167_L0.5780.10
42_A57_L0.5780.10
415_R437_A0.5780.10
437_A491_F0.5780.10
114_T137_I0.5770.10
159_A418_R0.5770.10
55_T484_A0.5770.10
235_Y250_L0.5770.10
380_S404_A0.5750.09
150_L432_F0.5740.09
57_L304_R0.5740.09
505_A510_A0.5740.09
5_V61_G0.5710.09
281_Y519_H0.5700.09
305_R322_A0.5690.09
188_Q271_L0.5690.09
29_Q241_L0.5680.09
90_L344_G0.5670.09
139_L342_D0.5670.09
315_P434_V0.5670.09
116_A282_D0.5660.09
252_F256_C0.5660.09
89_F303_A0.5660.09
46_I75_N0.5660.09
15_G404_A0.5650.09
296_F533_L0.5640.09
382_V451_P0.5620.09
168_D395_N0.5600.09
241_L499_V0.5590.09
75_N438_I0.5580.09
32_Y257_P0.5560.09
154_V246_E0.5560.09
282_D486_Y0.5550.09
142_G298_V0.5540.09
7_F114_T0.5540.09
130_L151_T0.5530.09
364_E533_L0.5520.09
282_D384_A0.5510.09
436_I482_K0.5510.09
352_R432_F0.5510.09
292_V484_A0.5510.09
483_K533_L0.5500.09
398_P427_V0.5500.09
256_C414_E0.5480.09
45_D57_L0.5480.09
398_P423_T0.5480.09
386_T528_Y0.5480.09
252_F325_N0.5470.09
478_L484_A0.5460.09
58_E104_T0.5440.09
340_D365_H0.5440.09
316_D395_N0.5440.09
304_R454_A0.5430.09
176_G415_R0.5430.09
14_S84_S0.5430.09
392_A490_F0.5430.09
167_L436_I0.5420.09
268_W298_V0.5420.09
397_G428_I0.5420.09
57_L408_T0.5420.09
82_S131_I0.5400.09
405_N498_A0.5380.09
38_E516_G0.5380.09
131_I140_T0.5370.09
266_Q350_L0.5370.09
7_F369_R0.5370.09
10_A381_R0.5370.09
286_V493_T0.5360.09
4_T94_Y0.5350.09
50_G329_M0.5330.09
380_S485_A0.5330.09
93_E330_A0.5320.09
64_T285_L0.5320.09
163_F325_N0.5310.09
379_V408_T0.5310.09
293_V533_L0.5300.09
502_G531_F0.5300.09
7_F101_A0.5290.09
14_S103_A0.5290.09
181_E326_E0.5250.09
29_Q95_E0.5240.09
151_T228_E0.5230.09
76_L347_T0.5230.09
296_F327_A0.5230.09
171_T486_Y0.5220.09
104_T181_E0.5220.09
134_L488_T0.5210.09
23_R476_G0.5210.09
78_S491_F0.5210.09
127_P446_F0.5200.09
321_F338_T0.5200.09
386_T483_K0.5190.09
164_A397_G0.5180.09
133_I519_H0.5170.09
316_D453_G0.5170.09
78_S492_H0.5160.09
151_T341_G0.5160.09
256_C312_A0.5150.09
105_Q370_F0.5150.09
386_T489_V0.5130.09
16_M531_F0.5120.09
111_L438_I0.5110.09
436_I523_M0.5100.09
185_G254_V0.5090.09
69_L442_L0.5090.09
407_A435_F0.5080.09
6_A122_V0.5080.09
46_I306_R0.5070.09
452_T525_V0.5070.09
136_V517_A0.5060.09
28_N227_S0.5050.09
23_R514_K0.5050.09
215_G433_F0.5030.09
46_I144_T0.5030.09
352_R413_L0.5010.09
237_L250_L0.5010.09
326_E528_Y0.5010.09
88_A95_E0.5010.09
126_G434_V0.5000.09
223_R392_A0.5000.09
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
3c1qA 2 0.2243 98.8 0.943 Contact Map
4hhxA 1 0.185 98.8 0.944 Contact Map
2whnA 1 0.2037 98.6 0.946 Contact Map
3mc2A 1 0.129 34.8 0.983 Contact Map
4tquN 1 0.2037 26.9 0.984 Contact Map
3rm5A 2 0.2037 26.2 0.984 Contact Map
3v83A 6 0.1252 24.6 0.984 Contact Map
3rlfG 1 0.1701 23.5 0.984 Contact Map
1pw4A 1 0.1944 14.4 0.986 Contact Map
2d3iA 1 0.1346 13.4 0.986 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.014 seconds.