Q9HQW0 - HALSA - GREMLIN Contacts

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Q9HQW0 - Uncharacterized protein

UniProt:	Q9HQW0	Sequences: MSSRATISSMSTYAILGCGSVGHAVAEELVERGKDVLIVDKDESRVEALRDQDLNAQVANVRDQEVAELIDTRDVVLVMASDVDANEAAVENIRARNDDQFVVARASDPVTSDELTELGADVVINPSSVISDAALRALESGELEYKARQLADVVSGTESGFAIITHDSPDPDSIAAAAALQAVARHLGIDAEILYFGDIGHQENRAFVNLLDIELTPYSDVDIDNYDTIALVDPAKAGAVSIDRDVDIFIDHYELEDESLTAEFADVRPSVSATSTILTKYIQEFDLSVSQTVATALLYGIRAETLDFRRDTTPADLTAAAYLYPFADHDTLEQVESPNMSPETLDVLAEAIASREVQGSHLVSNAGFISDRDALSQAASQLLNLEGITTTAVFGIVDDTIYLDAQSKDIRLNIGRVLADAFVDIGDSAGHSTQASAEIPLGIFTGIETTEENRETLLDLTEEAVTRKLFDAMGVESESANNGN	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	484 (410)
Sequences:	523 (408)
Seq/√Len:	20.1

BACSU - YYBT
HALSA - Q9HQW0 Q9HRL0

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
439_I	447_I	7.772	1.00
162_A	227_D	7.661	1.00
442_G	447_I	4.281	1.00
176_A	275_S	4.137	1.00
238_G	258_E	3.953	1.00
375_L	395_G	3.760	1.00
101_F	104_A	3.612	1.00
421_A	456_T	3.336	1.00
179_A	278_L	2.965	0.99
216_T	219_S	2.895	0.99
180_L	230_A	2.887	0.99
215_L	220_D	2.865	0.99
448_E	454_R	2.839	0.99
231_L	234_P	2.820	0.99
160_G	190_D	2.790	0.99
101_F	105_R	2.754	0.99
215_L	219_S	2.734	0.99
231_L	260_L	2.614	0.98
85_A	104_A	2.605	0.98
439_I	442_G	2.525	0.98
100_Q	104_A	2.504	0.97
163_I	191_A	2.503	0.97
453_N	457_L	2.465	0.97
150_L	248_I	2.433	0.97
158_E	324_Y	2.348	0.96
158_E	224_D	2.341	0.96
357_V	388_I	2.311	0.96
401_I	444_F	2.270	0.95
457_L	460_L	2.255	0.95
348_L	377_Q	2.239	0.95
275_S	297_L	2.187	0.94
175_A	275_S	2.174	0.94
93_I	100_Q	2.147	0.94
297_L	353_A	2.144	0.94
181_Q	191_A	2.137	0.94
455_E	459_D	2.112	0.93
154_V	184_A	2.098	0.93
358_Q	458_L	2.059	0.92
200_G	203_E	2.002	0.91
100_Q	105_R	1.992	0.91
79_M	84_D	1.969	0.90
396_I	417_V	1.966	0.90
332_L	352_I	1.945	0.90
161_F	236_K	1.902	0.89
93_I	101_F	1.849	0.87
456_T	460_L	1.847	0.87
392_A	417_V	1.829	0.87
274_T	377_Q	1.803	0.86
139_E	143_L	1.714	0.83
340_M	357_V	1.693	0.82
40_D	61_V	1.680	0.81
161_F	227_D	1.668	0.81
298_L	327_A	1.663	0.81
160_G	224_D	1.651	0.80
94_R	98_D	1.631	0.79
333_E	385_L	1.623	0.79
347_V	374_A	1.593	0.78
40_D	44_S	1.593	0.78
95_A	190_D	1.592	0.78
202_Q	211_L	1.587	0.78
85_A	101_F	1.583	0.77
204_N	321_A	1.562	0.76
403_L	439_I	1.559	0.76
163_I	193_I	1.551	0.76
350_E	353_A	1.549	0.76
389_T	411_R	1.535	0.75
250_I	281_Y	1.527	0.75
253_Y	404_D	1.523	0.74
295_T	331_T	1.522	0.74
376_S	382_L	1.521	0.74
79_M	85_A	1.517	0.74
249_F	438_E	1.510	0.74
93_I	97_N	1.500	0.73
196_F	229_I	1.496	0.73
153_V	229_I	1.493	0.73
418_L	436_S	1.486	0.73
412_L	457_L	1.461	0.71
163_I	357_V	1.453	0.71
359_G	457_L	1.438	0.70
63_D	67_A	1.434	0.70
162_A	192_E	1.429	0.70
205_R	213_I	1.424	0.69
318_T	325_P	1.414	0.69
55_N	60_N	1.409	0.68
167_D	243_D	1.407	0.68
322_Y	439_I	1.403	0.68
183_V	285_F	1.395	0.68
338_P	377_Q	1.395	0.68
184_A	191_A	1.387	0.67
206_A	211_L	1.369	0.66
103_V	177_A	1.361	0.66
41_K	44_S	1.352	0.65
173_S	177_A	1.347	0.65
79_M	104_A	1.336	0.64
75_V	79_M	1.328	0.64
141_G	376_S	1.325	0.64
236_K	258_E	1.320	0.63
282_I	290_S	1.316	0.63
356_E	452_E	1.308	0.63
405_A	418_L	1.308	0.63
101_F	106_A	1.308	0.63
147_A	283_Q	1.306	0.62
154_V	161_F	1.297	0.62
459_D	463_E	1.292	0.62
174_I	208_V	1.290	0.61
439_I	446_G	1.284	0.61
173_S	384_N	1.282	0.61
279_T	297_L	1.281	0.61
267_V	303_A	1.280	0.61
279_T	321_A	1.279	0.61
192_E	227_D	1.262	0.60
56_A	59_A	1.259	0.59
318_T	321_A	1.258	0.59
240_V	243_D	1.257	0.59
269_P	348_L	1.245	0.59
453_N	458_L	1.244	0.59
283_Q	322_Y	1.244	0.59
239_A	405_A	1.242	0.58
297_L	437_A	1.240	0.58
141_G	144_E	1.235	0.58
118_L	122_V	1.228	0.58
78_V	84_D	1.225	0.57
254_E	419_A	1.223	0.57
312_T	348_L	1.223	0.57
442_G	452_E	1.222	0.57
404_D	429_A	1.217	0.57
216_T	220_D	1.215	0.57
78_V	248_I	1.215	0.57
78_V	86_N	1.213	0.57
115_L	118_L	1.213	0.57
298_L	302_R	1.210	0.56
402_Y	436_S	1.205	0.56
253_Y	429_A	1.204	0.56
93_I	96_R	1.202	0.56
150_L	230_A	1.198	0.56
195_Y	208_V	1.197	0.56
272_S	419_A	1.193	0.55
203_E	213_I	1.184	0.55
90_V	96_R	1.180	0.54
47_E	56_A	1.177	0.54
56_A	60_N	1.177	0.54
306_L	380_S	1.175	0.54
394_F	436_S	1.174	0.54
207_F	296_A	1.163	0.53
143_L	158_E	1.155	0.53
140_S	143_L	1.154	0.53
439_I	452_E	1.154	0.53
194_L	221_V	1.153	0.53
351_A	364_S	1.153	0.53
354_S	403_L	1.144	0.52
310_R	405_A	1.144	0.52
203_E	206_A	1.144	0.52
161_F	416_R	1.143	0.52
249_F	267_V	1.141	0.52
184_A	230_A	1.130	0.51
365_N	444_F	1.124	0.51
121_D	413_N	1.124	0.51
295_T	333_E	1.117	0.50
314_P	318_T	1.115	0.50
297_L	339_N	1.115	0.50
61_V	457_L	1.114	0.50
85_A	88_A	1.109	0.50
180_L	341_S	1.104	0.49
202_Q	206_A	1.102	0.49
403_L	453_N	1.102	0.49
270_S	432_S	1.095	0.49
176_A	338_P	1.094	0.49
304_E	429_A	1.093	0.49
107_S	436_S	1.092	0.49
73_R	401_I	1.081	0.48
417_V	457_L	1.076	0.48
202_Q	205_R	1.073	0.47
163_I	458_L	1.072	0.47
53_D	60_N	1.071	0.47
299_Y	336_E	1.068	0.47
434_Q	453_N	1.061	0.47
180_L	281_Y	1.057	0.46
76_V	81_S	1.050	0.46
254_E	272_S	1.048	0.46
80_A	96_R	1.045	0.46
421_A	447_I	1.045	0.46
169_P	173_S	1.044	0.46
141_G	284_E	1.040	0.45
224_D	243_D	1.038	0.45
401_I	416_R	1.035	0.45
377_Q	432_S	1.035	0.45
85_A	105_R	1.032	0.45
388_I	448_E	1.031	0.45
76_V	79_M	1.025	0.44
75_V	94_R	1.023	0.44
253_Y	304_E	1.021	0.44
77_L	193_I	1.021	0.44
273_A	376_S	1.019	0.44
235_A	259_S	1.016	0.44
115_L	122_V	1.013	0.44
55_N	61_V	1.012	0.44
280_K	315_A	1.006	0.43
219_S	459_D	1.006	0.43
155_S	187_L	1.003	0.43
234_P	249_F	1.001	0.43
378_A	457_L	0.999	0.43
79_M	101_F	0.997	0.43
70_I	76_V	0.997	0.43
82_D	89_A	0.996	0.43
256_E	417_V	0.995	0.42
76_V	88_A	0.994	0.42
240_V	256_E	0.994	0.42
158_E	227_D	0.993	0.42
132_D	439_I	0.993	0.42
234_P	267_V	0.990	0.42
278_L	281_Y	0.984	0.42
205_R	211_L	0.984	0.42
361_H	409_D	0.983	0.42
277_I	403_L	0.978	0.41
235_A	279_T	0.978	0.41
301_I	447_I	0.972	0.41
205_R	208_V	0.971	0.41
321_A	397_V	0.970	0.41
404_D	436_S	0.969	0.41
302_R	432_S	0.966	0.41
142_E	241_S	0.961	0.40
284_E	313_T	0.959	0.40
212_D	412_L	0.958	0.40
183_V	234_P	0.958	0.40
229_I	239_A	0.955	0.40
380_S	409_D	0.954	0.40
123_V	285_F	0.952	0.40
119_G	122_V	0.951	0.40
200_G	213_I	0.950	0.40
127_S	190_D	0.949	0.40
208_V	455_E	0.948	0.40
270_S	313_T	0.947	0.39
354_S	444_F	0.945	0.39
161_F	230_A	0.945	0.39
171_P	321_A	0.941	0.39
176_A	355_R	0.939	0.39
451_E	455_E	0.938	0.39
117_E	362_L	0.937	0.39
171_P	298_L	0.936	0.39
79_M	105_R	0.932	0.39
44_S	57_Q	0.931	0.38
76_V	80_A	0.929	0.38
97_N	100_Q	0.929	0.38
157_T	228_T	0.925	0.38
222_D	447_I	0.921	0.38
243_D	352_I	0.919	0.38
63_D	66_V	0.918	0.38
126_P	266_D	0.918	0.38
182_A	293_V	0.916	0.38
412_L	417_V	0.916	0.38
447_I	452_E	0.915	0.37
124_I	235_A	0.913	0.37
80_A	86_N	0.910	0.37
39_V	75_V	0.909	0.37
153_V	228_T	0.908	0.37
184_A	285_F	0.908	0.37
178_A	296_A	0.907	0.37
295_T	336_E	0.902	0.37
136_R	313_T	0.901	0.37
86_N	90_V	0.900	0.37
161_F	184_A	0.897	0.36
365_N	445_T	0.894	0.36
163_I	340_M	0.894	0.36
236_K	256_E	0.891	0.36
401_I	439_I	0.890	0.36
132_D	135_L	0.890	0.36
108_D	112_S	0.887	0.36
169_P	298_L	0.886	0.36
77_L	245_D	0.882	0.35
163_I	177_A	0.876	0.35
57_Q	140_S	0.870	0.35
249_F	378_A	0.868	0.35
297_L	433_T	0.866	0.35
441_L	446_G	0.865	0.34
50_R	211_L	0.864	0.34
46_V	54_L	0.863	0.34
298_L	337_S	0.861	0.34
376_S	399_D	0.857	0.34
267_V	401_I	0.854	0.34
330_D	455_E	0.854	0.34
184_A	351_A	0.851	0.34
310_R	418_L	0.849	0.34
174_I	212_D	0.848	0.33
75_V	88_A	0.847	0.33
77_L	339_N	0.843	0.33
338_P	367_G	0.842	0.33
50_R	58_V	0.840	0.33
310_R	433_T	0.839	0.33
89_A	92_N	0.837	0.33
98_D	211_L	0.837	0.33
374_A	378_A	0.835	0.33
336_E	394_F	0.832	0.33
189_I	385_L	0.832	0.33
306_L	409_D	0.831	0.33
79_M	88_A	0.831	0.33
291_Q	401_I	0.830	0.32
190_D	219_S	0.825	0.32
444_F	457_L	0.823	0.32
225_N	275_S	0.822	0.32
429_A	436_S	0.821	0.32
379_A	393_V	0.814	0.32
163_I	366_A	0.813	0.31
139_E	324_Y	0.811	0.31
170_D	253_Y	0.809	0.31
66_V	231_L	0.807	0.31
163_I	181_Q	0.804	0.31
235_A	373_D	0.804	0.31
151_A	155_S	0.803	0.31
254_E	276_T	0.803	0.31
351_A	366_A	0.801	0.31
355_R	382_L	0.800	0.31
331_T	351_A	0.797	0.31
279_T	296_A	0.796	0.31
291_Q	328_D	0.795	0.30
278_L	282_I	0.795	0.30
226_Y	360_S	0.795	0.30
250_I	278_L	0.795	0.30
103_V	106_A	0.795	0.30
71_D	106_A	0.793	0.30
108_D	111_T	0.792	0.30
40_D	101_F	0.783	0.30
146_K	157_T	0.782	0.30
148_R	269_P	0.781	0.30
204_N	373_D	0.781	0.30
133_A	136_R	0.780	0.30
177_A	232_V	0.778	0.30
86_N	302_R	0.778	0.30
83_V	93_I	0.776	0.29
117_E	152_D	0.775	0.29
108_D	115_L	0.772	0.29
57_Q	60_N	0.772	0.29
116_T	270_S	0.771	0.29
136_R	280_K	0.771	0.29
234_P	351_A	0.768	0.29
182_A	185_R	0.766	0.29
298_L	371_D	0.763	0.29
99_D	102_V	0.762	0.29
188_G	216_T	0.760	0.29
206_A	213_I	0.759	0.29
39_V	59_A	0.759	0.29
95_A	106_A	0.756	0.28
46_V	52_Q	0.756	0.28
365_N	448_E	0.753	0.28
181_Q	372_R	0.752	0.28
235_A	433_T	0.749	0.28
212_D	388_I	0.747	0.28
396_I	457_L	0.745	0.28
46_V	56_A	0.744	0.28
50_R	339_N	0.742	0.28
132_D	208_V	0.741	0.28
288_S	345_L	0.739	0.27
334_Q	408_K	0.739	0.27
298_L	380_S	0.737	0.27
51_D	77_L	0.736	0.27
278_L	302_R	0.734	0.27
88_A	93_I	0.733	0.27
141_G	293_V	0.733	0.27
215_L	340_M	0.731	0.27
169_P	281_Y	0.728	0.27
75_V	104_A	0.727	0.27
245_D	297_L	0.726	0.27
81_S	85_A	0.723	0.27
86_N	105_R	0.722	0.27
40_D	119_G	0.719	0.26
200_G	204_N	0.719	0.26
447_I	461_T	0.719	0.26
146_K	266_D	0.716	0.26
337_S	436_S	0.715	0.26
94_R	102_V	0.713	0.26
420_D	456_T	0.713	0.26
341_S	364_S	0.713	0.26
192_E	226_Y	0.712	0.26
314_P	385_L	0.711	0.26
412_L	462_E	0.709	0.26
371_D	374_A	0.708	0.26
74_D	455_E	0.706	0.26
168_S	395_G	0.703	0.26
74_D	135_L	0.702	0.26
109_P	112_S	0.701	0.26
394_F	444_F	0.700	0.26
156_G	274_T	0.700	0.26
163_I	180_L	0.697	0.25
55_N	62_R	0.697	0.25
75_V	84_D	0.697	0.25
403_L	418_L	0.695	0.25
197_G	452_E	0.694	0.25
75_V	85_A	0.694	0.25
52_Q	55_N	0.693	0.25
122_V	419_A	0.693	0.25
193_I	389_T	0.692	0.25
48_A	52_Q	0.691	0.25
114_E	432_S	0.689	0.25
183_V	378_A	0.686	0.25
200_G	211_L	0.686	0.25
86_N	195_Y	0.685	0.25
66_V	188_G	0.683	0.25
177_A	456_T	0.681	0.25
262_A	307_D	0.680	0.25
118_L	165_T	0.680	0.25
354_S	364_S	0.679	0.24
86_N	104_A	0.678	0.24
195_Y	256_E	0.677	0.24
95_A	451_E	0.677	0.24
87_E	91_E	0.674	0.24
58_V	63_D	0.674	0.24
304_E	404_D	0.673	0.24
119_G	407_S	0.673	0.24
136_R	153_V	0.673	0.24
146_K	409_D	0.672	0.24
344_T	454_R	0.672	0.24
255_L	265_A	0.672	0.24
176_A	247_D	0.671	0.24
457_L	461_T	0.671	0.24
298_L	329_H	0.670	0.24
154_V	176_A	0.670	0.24
229_I	234_P	0.669	0.24
183_V	314_P	0.669	0.24
78_V	102_V	0.666	0.24
152_D	158_E	0.666	0.24
183_V	209_N	0.666	0.24
205_R	341_S	0.665	0.24
168_S	204_N	0.664	0.24
46_V	49_L	0.663	0.24
306_L	403_L	0.663	0.24
372_R	395_G	0.661	0.24
75_V	86_N	0.661	0.24
194_L	255_L	0.660	0.24
92_N	97_N	0.659	0.24
193_I	385_L	0.658	0.23
284_E	376_S	0.658	0.23
75_V	91_E	0.656	0.23
90_V	93_I	0.656	0.23
354_S	369_I	0.656	0.23
197_G	354_S	0.655	0.23
208_V	441_L	0.654	0.23
138_L	453_N	0.650	0.23
90_V	94_R	0.648	0.23
87_E	462_E	0.648	0.23
197_G	387_G	0.645	0.23
79_M	100_Q	0.645	0.23
356_E	454_R	0.644	0.23
446_G	452_E	0.642	0.23
67_A	82_D	0.642	0.23
39_V	95_A	0.642	0.23
311_D	436_S	0.641	0.23
94_R	445_T	0.641	0.23
266_D	372_R	0.641	0.23
114_E	267_V	0.641	0.23
85_A	90_V	0.639	0.23
394_F	448_E	0.637	0.23
223_I	443_I	0.636	0.22
454_R	457_L	0.636	0.22
89_A	387_G	0.634	0.22
137_A	293_V	0.634	0.22
214_E	341_S	0.629	0.22
180_L	378_A	0.628	0.22
261_T	356_E	0.628	0.22
311_D	432_S	0.625	0.22
166_H	233_D	0.624	0.22
193_I	209_N	0.623	0.22
169_P	340_M	0.623	0.22
85_A	93_I	0.621	0.22
356_E	448_E	0.620	0.22
458_L	461_T	0.617	0.22
118_L	121_D	0.617	0.22
168_S	176_A	0.615	0.22
141_G	264_F	0.613	0.21
150_L	250_I	0.613	0.21
108_D	317_L	0.611	0.21
85_A	100_Q	0.610	0.21
72_T	75_V	0.609	0.21
399_D	459_D	0.608	0.21
197_G	373_D	0.607	0.21
151_A	212_D	0.606	0.21
364_S	389_T	0.606	0.21
263_E	283_Q	0.605	0.21
202_Q	214_E	0.603	0.21
209_N	212_D	0.603	0.21
415_G	419_A	0.602	0.21
292_T	388_I	0.602	0.21
100_Q	103_V	0.602	0.21
185_R	364_S	0.602	0.21
322_Y	453_N	0.602	0.21
124_I	281_Y	0.602	0.21
338_P	403_L	0.600	0.21
190_D	245_D	0.600	0.21
70_I	87_E	0.600	0.21
420_D	459_D	0.600	0.21
285_F	366_A	0.599	0.21
123_V	438_E	0.599	0.21
348_L	448_E	0.598	0.21
75_V	81_S	0.596	0.21
177_A	373_D	0.595	0.21
57_Q	249_F	0.595	0.21
168_S	174_I	0.595	0.21
443_I	446_G	0.594	0.21
215_L	412_L	0.594	0.21
118_L	273_A	0.593	0.21
195_Y	386_E	0.593	0.21
180_L	364_S	0.593	0.21
314_P	325_P	0.592	0.21
108_D	225_N	0.592	0.21
40_D	43_E	0.591	0.20
124_I	375_L	0.591	0.20
229_I	277_I	0.588	0.20
60_N	63_D	0.586	0.20
277_I	409_D	0.586	0.20
126_P	345_L	0.586	0.20
97_N	101_F	0.586	0.20
173_S	191_A	0.585	0.20
417_V	440_P	0.585	0.20
203_E	375_L	0.585	0.20
176_A	274_T	0.585	0.20
140_S	154_V	0.581	0.20
133_A	434_Q	0.580	0.20
125_N	178_A	0.577	0.20
117_E	136_R	0.576	0.20
136_R	315_A	0.576	0.20
305_T	382_L	0.576	0.20
200_G	205_R	0.575	0.20
195_Y	198_D	0.574	0.20
108_D	118_L	0.573	0.20
149_Q	315_A	0.573	0.20
267_V	352_I	0.572	0.20
189_I	193_I	0.571	0.20
77_L	197_G	0.571	0.20
95_A	99_D	0.570	0.20
253_Y	436_S	0.569	0.20
115_L	326_F	0.569	0.20
177_A	339_N	0.568	0.20
203_E	207_F	0.568	0.20
212_D	452_E	0.567	0.19
103_V	153_V	0.567	0.19
194_L	231_L	0.567	0.19
205_R	216_T	0.567	0.19
163_I	378_A	0.566	0.19
40_D	85_A	0.563	0.19
40_D	79_M	0.563	0.19
139_E	280_K	0.561	0.19
136_R	446_G	0.560	0.19
235_A	267_V	0.557	0.19
335_V	348_L	0.557	0.19
170_D	429_A	0.557	0.19
161_F	228_T	0.554	0.19
188_G	341_S	0.554	0.19
340_M	346_D	0.553	0.19
133_A	295_T	0.552	0.19
80_A	85_A	0.552	0.19
219_S	222_D	0.552	0.19
148_R	151_A	0.550	0.19
165_T	326_F	0.548	0.19
298_L	409_D	0.548	0.19
77_L	162_A	0.548	0.19
178_A	391_T	0.547	0.19
209_N	355_R	0.546	0.19
330_D	341_S	0.546	0.19
136_R	270_S	0.545	0.19
129_V	204_N	0.545	0.19
93_I	105_R	0.545	0.19
273_A	276_T	0.544	0.19
39_V	96_R	0.543	0.19
256_E	303_A	0.541	0.18
191_A	291_Q	0.541	0.18
39_V	54_L	0.540	0.18
166_H	429_A	0.539	0.18
219_S	244_R	0.539	0.18
214_E	401_I	0.538	0.18
183_V	282_I	0.537	0.18
177_A	375_L	0.536	0.18
146_K	298_L	0.535	0.18
154_V	432_S	0.534	0.18
39_V	53_D	0.533	0.18
420_D	440_P	0.533	0.18
81_S	436_S	0.533	0.18
204_N	211_L	0.533	0.18
49_L	59_A	0.532	0.18
155_S	223_I	0.532	0.18
42_D	60_N	0.530	0.18
143_L	148_R	0.529	0.18
209_N	439_I	0.527	0.18
86_N	101_F	0.526	0.18
260_L	417_V	0.525	0.18
42_D	55_N	0.525	0.18
454_R	458_L	0.525	0.18
328_D	379_A	0.523	0.18
312_T	320_A	0.523	0.18
443_I	452_E	0.523	0.18
215_L	373_D	0.522	0.18
231_L	267_V	0.521	0.18
176_A	318_T	0.520	0.18
86_N	100_Q	0.519	0.18
232_V	378_A	0.518	0.18
151_A	243_D	0.518	0.18
169_P	360_S	0.518	0.18
119_G	419_A	0.516	0.17
206_A	212_D	0.515	0.17
346_D	364_S	0.513	0.17
214_E	290_S	0.513	0.17
113_D	116_T	0.512	0.17
88_A	95_A	0.511	0.17
454_R	459_D	0.511	0.17
96_R	216_T	0.509	0.17
211_L	420_D	0.509	0.17
70_I	105_R	0.507	0.17
108_D	387_G	0.506	0.17
348_L	386_E	0.505	0.17
177_A	374_A	0.505	0.17
270_S	391_T	0.504	0.17
211_L	344_T	0.503	0.17
183_V	296_A	0.503	0.17
357_V	399_D	0.502	0.17
333_E	380_S	0.502	0.17
381_Q	385_L	0.501	0.17
459_D	462_E	0.500	0.17
117_E	296_A	0.500	0.17

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4py9A	2	0.6467	100	0.662	Contact Map
4ls9A	2	0.6219	100	0.663	Contact Map
3devA	2	0.6178	100	0.68	Contact Map
4rpaA	3	0.5888	100	0.729	Contact Map
2hawA	2	0.5909	100	0.732	Contact Map
1k20A	2	0.5909	100	0.74	Contact Map
2eb0A	2	0.5682	100	0.756	Contact Map
1wpnA	2	0.3698	100	0.777	Contact Map
2zxrA	1	0.6942	100	0.781	Contact Map
2qb7A	1	0.6529	100	0.784	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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