Q9HQQ9 - HALSA - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

Q9HQQ9 - UDP-glucose dehydrogenase

UniProt:	Q9HQQ9	Sequences: MDVSIVGSGYVGTTIAACFAELGHTVVNVDVDADVVAAINDGDAPIHEPGLAERIDAHAGTRLRATTDYEAVRDTDVTFLALPTPAREDGSIDTSIMESGAASLGEALAGADDHMVVVKSTVVPGTTEDVVESALVSAGFDDPLLAMNPEFLRMGSAVDDFRHPDKVVFGARRDAAYDQLHAVFEPLLADAGDATVVETGLREAEMIKYANNAFLASKVSLINDLGNICKELGVDAYEVADAIAEDDRISGRFLRSGVGWGGSCFPKDVAAITAAAKDAGYEPAMLEAAVEVNDRQPERLLSLLDGHVDVAGERVAVLGLSFKPGTDDIRGTRAVPVIDGLQDREADVVAYDPVAAEKMAEQRPEVTYADSAAGALADAVGAVVVTDWDEFAALDDEFDAMAERVVVDGRRVVDPQADLTYDGLTW	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	426 (403)
Sequences:	8419 (5090)
Seq/√Len:	253.5

ECOLI - WECC UDG
BACSU - YTCA YWQF TUAD
HALSA - Q9HQQ9 Q9HSW5
SULSO - Q7LXG4

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
128_E	202_R	5.095	1.00
33_A	37_A	4.882	1.00
351_Y	391_F	4.328	1.00
304_L	383_V	3.489	1.00
2_D	25_T	3.415	1.00
325_G	389_D	3.398	1.00
314_R	347_D	3.340	1.00
314_R	349_V	3.180	1.00
38_A	43_D	3.016	1.00
305_D	344_R	2.987	1.00
146_A	180_L	2.910	1.00
304_L	381_G	2.711	1.00
199_T	238_E	2.703	1.00
316_A	379_A	2.681	1.00
172_R	176_A	2.536	1.00
102_A	137_S	2.525	1.00
317_V	338_I	2.513	1.00
21_E	57_A	2.488	1.00
4_S	75_T	2.462	1.00
298_E	340_G	2.454	1.00
40_N	65_A	2.407	1.00
230_K	303_L	2.395	1.00
132_E	145_L	2.388	1.00
200_G	203_E	2.373	1.00
284_A	291_E	2.321	1.00
37_A	41_D	2.284	1.00
337_V	385_V	2.274	1.00
321_S	355_A	2.257	1.00
235_D	238_E	2.211	1.00
109_A	114_H	2.183	1.00
159_D	163_H	2.127	1.00
77_V	183_V	2.101	1.00
315_V	346_A	2.051	1.00
25_T	64_R	2.043	1.00
349_V	379_A	2.020	1.00
211_N	243_I	1.997	1.00
69_Y	103_S	1.985	1.00
8_S	28_N	1.962	1.00
25_T	62_R	1.949	1.00
102_A	133_S	1.946	1.00
398_F	404_R	1.946	1.00
33_A	67_T	1.921	1.00
213_A	221_L	1.901	1.00
177_Y	198_E	1.900	1.00
232_L	279_A	1.897	1.00
34_D	37_A	1.896	1.00
199_T	207_I	1.888	1.00
384_V	412_V	1.868	1.00
371_S	374_G	1.860	1.00
144_L	173_R	1.855	1.00
44_A	55_I	1.851	1.00
380_V	402_A	1.834	1.00
78_T	114_H	1.825	1.00
177_Y	181_H	1.811	1.00
277_K	287_E	1.794	1.00
217_S	289_A	1.791	1.00
24_H	186_P	1.784	1.00
87_R	91_S	1.778	1.00
349_V	369_A	1.777	1.00
206_M	229_C	1.773	1.00
316_A	375_A	1.752	1.00
113_D	144_L	1.741	1.00
99_S	102_A	1.707	1.00
32_D	35_V	1.704	1.00
3_V	183_V	1.671	1.00
2_D	74_D	1.641	1.00
98_E	102_A	1.626	1.00
282_E	287_E	1.626	1.00
17_A	55_I	1.615	1.00
214_F	218_K	1.602	1.00
37_A	40_N	1.588	1.00
115_M	179_Q	1.577	1.00
21_E	58_H	1.560	1.00
299_R	303_L	1.557	1.00
30_D	36_V	1.551	1.00
4_S	78_T	1.537	1.00
340_G	343_D	1.535	1.00
98_E	129_D	1.514	1.00
178_D	182_A	1.511	1.00
273_T	287_E	1.500	1.00
19_F	183_V	1.496	1.00
389_D	392_A	1.495	1.00
17_A	63_L	1.486	1.00
324_P	387_D	1.476	1.00
287_E	291_E	1.476	1.00
181_H	198_E	1.475	1.00
39_I	65_A	1.465	1.00
304_L	407_V	1.464	1.00
231_E	281_Y	1.457	1.00
18_C	21_E	1.452	1.00
228_I	283_P	1.436	1.00
230_K	299_R	1.435	1.00
320_L	350_A	1.434	1.00
38_A	45_P	1.434	1.00
258_V	409_G	1.434	1.00
227_N	299_R	1.413	1.00
29_V	69_Y	1.409	1.00
340_G	344_R	1.407	1.00
214_F	252_R	1.399	1.00
52_A	56_D	1.396	1.00
341_L	346_A	1.392	1.00
108_L	114_H	1.381	1.00
17_A	54_R	1.380	1.00
50_G	53_E	1.375	1.00
36_V	67_T	1.370	1.00
178_D	197_V	1.368	1.00
227_N	296_Q	1.357	1.00
36_V	65_A	1.346	1.00
335_V	339_D	1.339	1.00
68_D	71_A	1.339	1.00
77_V	115_M	1.338	1.00
171_A	177_Y	1.337	1.00
301_L	337_V	1.333	1.00
217_S	221_L	1.326	1.00
98_E	130_V	1.307	1.00
71_A	74_D	1.300	1.00
18_C	162_R	1.300	1.00
34_D	38_A	1.286	1.00
64_R	71_A	1.271	1.00
307_H	407_V	1.261	1.00
238_E	241_D	1.255	1.00
144_L	176_A	1.255	1.00
2_D	27_V	1.252	1.00
303_L	407_V	1.250	1.00
285_M	288_A	1.241	1.00
316_A	382_A	1.240	1.00
222_I	240_A	1.233	1.00
54_R	158_V	1.222	1.00
227_N	231_E	1.219	1.00
354_V	390_E	1.218	1.00
217_S	285_M	1.215	1.00
406_V	413_V	1.215	1.00
21_E	162_R	1.209	1.00
132_E	136_V	1.208	1.00
95_S	99_S	1.203	1.00
110_G	113_D	1.191	1.00
229_C	236_A	1.188	1.00
73_R	109_A	1.180	1.00
27_V	75_T	1.180	1.00
207_I	242_A	1.171	1.00
156_S	159_D	1.170	1.00
314_R	378_D	1.165	1.00
285_M	292_V	1.160	1.00
376_L	382_A	1.160	1.00
318_L	394_L	1.157	1.00
182_A	185_E	1.156	1.00
27_V	64_R	1.153	1.00
38_A	41_D	1.148	1.00
58_H	62_R	1.148	1.00
260_W	290_V	1.143	1.00
126_T	130_V	1.138	1.00
210_A	225_L	1.138	1.00
129_D	133_S	1.137	1.00
301_L	340_G	1.133	1.00
27_V	74_D	1.132	1.00
40_N	64_R	1.132	1.00
69_Y	107_A	1.131	1.00
377_A	400_A	1.129	1.00
116_V	134_A	1.127	1.00
200_G	238_E	1.127	1.00
225_L	236_A	1.126	1.00
336_P	339_D	1.122	1.00
181_H	185_E	1.120	1.00
316_A	349_V	1.117	1.00
102_A	106_E	1.114	1.00
39_I	63_L	1.107	1.00
315_V	381_G	1.104	1.00
174_D	178_D	1.097	1.00
131_V	135_L	1.094	1.00
148_N	184_F	1.091	1.00
247_D	252_R	1.090	1.00
70_E	73_R	1.086	1.00
203_E	234_V	1.086	1.00
320_L	360_A	1.086	1.00
179_Q	182_A	1.084	1.00
298_E	302_S	1.081	1.00
27_V	66_T	1.079	1.00
77_V	179_Q	1.078	1.00
6_V	100_G	1.076	1.00
113_D	142_D	1.076	1.00
6_V	78_T	1.074	1.00
54_R	57_A	1.068	1.00
35_V	45_P	1.066	1.00
237_Y	255_R	1.061	1.00
101_A	105_G	1.057	1.00
36_V	40_N	1.057	1.00
53_E	57_A	1.051	1.00
144_L	172_R	1.051	1.00
128_E	132_E	1.049	1.00
185_E	195_T	1.045	1.00
384_V	413_V	1.033	1.00
284_A	295_R	1.031	1.00
173_R	176_A	1.031	1.00
384_V	406_V	1.029	1.00
305_D	346_A	1.028	1.00
389_D	393_A	1.027	1.00
160_D	163_H	1.026	1.00
85_P	93_D	1.025	1.00
8_S	16_A	1.024	1.00
339_D	342_Q	1.023	1.00
56_D	59_A	1.020	1.00
347_D	367_T	1.019	1.00
74_D	109_A	1.019	1.00
176_A	180_L	1.018	1.00
102_A	134_A	1.016	1.00
115_M	146_A	1.015	1.00
76_D	114_H	1.009	1.00
310_V	346_A	1.008	1.00
118_V	127_T	1.002	1.00
70_E	74_D	0.991	1.00
338_I	342_Q	0.990	1.00
3_V	19_F	0.990	1.00
237_Y	241_D	0.982	1.00
304_L	409_G	0.980	1.00
234_V	239_V	0.979	1.00
169_F	180_L	0.974	1.00
113_D	143_P	0.970	1.00
228_I	281_Y	0.968	1.00
216_A	290_V	0.967	1.00
203_E	239_V	0.966	1.00
80_L	104_L	0.964	1.00
135_L	138_A	0.963	1.00
131_V	172_R	0.961	1.00
283_P	286_L	0.961	1.00
108_L	135_L	0.961	1.00
16_A	28_N	0.960	1.00
92_I	123_V	0.954	1.00
4_S	29_V	0.954	1.00
305_D	310_V	0.948	1.00
16_A	63_L	0.944	1.00
128_E	201_L	0.942	1.00
110_G	142_D	0.942	1.00
313_E	380_V	0.941	1.00
178_D	181_H	0.941	1.00
99_S	103_S	0.937	1.00
229_C	239_V	0.937	1.00
241_D	251_G	0.937	1.00
336_P	340_G	0.936	1.00
110_G	114_H	0.934	1.00
51_L	55_I	0.930	1.00
258_V	385_V	0.930	1.00
339_D	343_D	0.929	1.00
318_L	382_A	0.926	1.00
275_A	278_D	0.923	1.00
18_C	161_F	0.923	1.00
227_N	295_R	0.921	1.00
320_L	332_T	0.921	1.00
329_I	360_A	0.921	1.00
314_R	379_A	0.919	1.00
355_A	368_Y	0.914	1.00
302_S	306_G	0.912	1.00
21_E	53_E	0.911	1.00
103_S	106_E	0.907	1.00
295_R	298_E	0.907	1.00
369_A	375_A	0.905	1.00
8_S	63_L	0.903	1.00
381_G	405_V	0.902	1.00
64_R	70_E	0.901	1.00
29_V	71_A	0.901	1.00
127_T	201_L	0.900	1.00
66_T	71_A	0.899	1.00
378_D	402_A	0.897	1.00
130_V	134_A	0.897	1.00
181_H	197_V	0.896	1.00
307_H	405_V	0.896	1.00
4_S	27_V	0.893	1.00
297_P	336_P	0.893	1.00
315_V	383_V	0.890	1.00
104_L	116_V	0.881	1.00
105_G	137_S	0.880	1.00
108_L	143_P	0.878	1.00
308_V	313_E	0.874	1.00
163_H	189_A	0.868	1.00
334_A	385_V	0.868	1.00
162_R	189_A	0.868	1.00
77_V	117_V	0.866	1.00
15_I	161_F	0.866	1.00
374_G	377_A	0.863	0.99
312_G	347_D	0.862	0.99
342_Q	365_E	0.860	0.99
181_H	195_T	0.855	0.99
303_L	306_G	0.854	0.99
98_E	133_S	0.849	0.99
55_I	63_L	0.848	0.99
101_A	118_V	0.847	0.99
3_V	24_H	0.843	0.99
80_L	97_M	0.843	0.99
369_A	374_G	0.841	0.99
29_V	66_T	0.841	0.99
372_A	376_L	0.840	0.99
387_D	410_R	0.838	0.99
320_L	329_I	0.838	0.99
274_A	278_D	0.837	0.99
218_K	254_L	0.833	0.99
129_D	132_E	0.829	0.99
4_S	72_V	0.829	0.99
117_V	180_L	0.827	0.99
273_T	286_L	0.825	0.99
300_L	409_G	0.825	0.99
131_V	201_L	0.824	0.99
260_W	269_V	0.822	0.99
270_A	290_V	0.819	0.99
31_V	103_S	0.813	0.99
177_Y	197_V	0.809	0.99
398_F	402_A	0.808	0.99
304_L	315_V	0.805	0.99
228_I	272_I	0.804	0.99
349_V	367_T	0.803	0.99
174_D	177_Y	0.802	0.99
318_L	391_F	0.801	0.99
115_M	176_A	0.801	0.99
301_L	344_R	0.799	0.99
178_D	198_E	0.797	0.99
101_A	134_A	0.788	0.99
316_A	376_L	0.785	0.99
22_L	186_P	0.782	0.99
399_D	402_A	0.780	0.99
324_P	389_D	0.778	0.99
105_G	134_A	0.777	0.99
318_L	376_L	0.777	0.99
329_I	359_M	0.773	0.99
101_A	131_V	0.770	0.99
69_Y	106_E	0.766	0.99
294_D	336_P	0.766	0.99
376_L	400_A	0.765	0.99
77_V	180_L	0.763	0.99
189_A	195_T	0.763	0.99
300_L	407_V	0.762	0.99
304_L	341_L	0.760	0.99
27_V	71_A	0.759	0.99
152_L	161_F	0.758	0.99
78_T	104_L	0.757	0.99
244_A	253_F	0.756	0.99
349_V	378_D	0.756	0.99
396_D	413_V	0.756	0.99
320_L	338_I	0.756	0.99
274_A	277_K	0.754	0.99
117_V	183_V	0.753	0.99
22_L	187_L	0.753	0.99
110_G	141_D	0.753	0.99
342_Q	366_V	0.751	0.99
332_T	335_V	0.750	0.99
387_D	392_A	0.748	0.99
214_F	254_L	0.748	0.99
372_A	390_E	0.748	0.99
5_I	16_A	0.746	0.99
382_A	401_M	0.745	0.99
295_R	302_S	0.744	0.99
273_T	290_V	0.743	0.98
101_A	133_S	0.741	0.98
92_I	271_A	0.734	0.98
146_A	171_A	0.734	0.98
329_I	355_A	0.733	0.98
29_V	67_T	0.733	0.98
171_A	176_A	0.731	0.98
338_I	350_A	0.728	0.98
165_D	247_D	0.725	0.98
356_A	368_Y	0.720	0.98
15_I	166_K	0.720	0.98
119_K	184_F	0.718	0.98
197_V	245_E	0.717	0.98
73_R	107_A	0.717	0.98
373_A	400_A	0.711	0.98
15_I	19_F	0.705	0.98
329_I	335_V	0.704	0.98
357_E	360_A	0.703	0.98
29_V	103_S	0.703	0.98
80_L	116_V	0.700	0.98
105_G	143_P	0.700	0.98
54_R	58_H	0.699	0.98
195_T	245_E	0.697	0.98
218_K	222_I	0.696	0.98
276_A	283_P	0.694	0.98
236_A	240_A	0.694	0.98
35_V	38_A	0.693	0.98
97_M	126_T	0.693	0.98
47_H	354_V	0.689	0.98
171_A	198_E	0.689	0.98
357_E	370_D	0.687	0.97
18_C	158_V	0.687	0.97
10_Y	330_R	0.686	0.97
298_E	336_P	0.685	0.97
76_D	179_Q	0.684	0.97
401_M	404_R	0.684	0.97
360_A	368_Y	0.684	0.97
342_Q	348_V	0.683	0.97
213_A	286_L	0.683	0.97
168_V	195_T	0.682	0.97
103_S	107_A	0.679	0.97
70_E	107_A	0.679	0.97
4_S	71_A	0.678	0.97
258_V	300_L	0.677	0.97
153_R	156_S	0.676	0.97
8_S	30_D	0.676	0.97
203_E	238_E	0.673	0.97
317_V	383_V	0.670	0.97
35_V	39_I	0.670	0.97
72_V	78_T	0.669	0.97
237_Y	411_R	0.668	0.97
43_D	51_L	0.668	0.97
102_A	136_V	0.667	0.97
370_D	374_G	0.666	0.97
244_A	251_G	0.666	0.97
382_A	391_F	0.665	0.97
225_L	272_I	0.665	0.97
43_D	52_A	0.663	0.97
127_T	147_M	0.661	0.97
199_T	203_E	0.661	0.97
101_A	130_V	0.659	0.97
154_M	322_F	0.654	0.97
6_V	69_Y	0.654	0.97
104_L	107_A	0.654	0.97
170_G	177_Y	0.653	0.97
25_T	74_D	0.651	0.97
31_V	96_I	0.651	0.97
308_V	315_V	0.648	0.96
227_N	281_Y	0.648	0.96
168_V	181_H	0.648	0.96
132_E	135_L	0.648	0.96
97_M	101_A	0.647	0.96
308_V	381_G	0.645	0.96
105_G	116_V	0.644	0.96
243_I	251_G	0.644	0.96
318_L	372_A	0.643	0.96
275_A	279_A	0.643	0.96
356_A	360_A	0.643	0.96
168_V	207_I	0.641	0.96
216_A	260_W	0.641	0.96
173_R	178_D	0.641	0.96
228_I	276_A	0.639	0.96
355_A	359_M	0.637	0.96
118_V	130_V	0.637	0.96
350_A	366_V	0.636	0.96
240_A	244_A	0.635	0.96
294_D	297_P	0.635	0.96
76_D	110_G	0.634	0.96
269_V	290_V	0.634	0.96
146_A	169_F	0.634	0.96
152_L	157_A	0.633	0.96
241_D	244_A	0.632	0.96
318_L	384_V	0.630	0.96
224_D	292_V	0.629	0.96
353_P	391_F	0.629	0.96
231_E	282_E	0.628	0.96
221_L	225_L	0.627	0.96
30_D	67_T	0.626	0.96
5_I	15_I	0.623	0.96
121_T	268_D	0.623	0.96
240_A	255_R	0.623	0.96
396_D	406_V	0.622	0.96
212_N	268_D	0.621	0.95
61_T	64_R	0.619	0.95
80_L	118_V	0.619	0.95
167_V	207_I	0.619	0.95
277_K	282_E	0.618	0.95
97_M	118_V	0.617	0.95
270_A	294_D	0.616	0.95
29_V	100_G	0.616	0.95
121_T	264_C	0.612	0.95
78_T	107_A	0.612	0.95
297_P	337_V	0.611	0.95
308_V	405_V	0.611	0.95
53_E	56_D	0.610	0.95
96_I	100_G	0.609	0.95
86_A	270_A	0.609	0.95
133_S	136_V	0.608	0.95
79_F	183_V	0.608	0.95
240_A	256_S	0.607	0.95
172_R	201_L	0.605	0.95
104_L	108_L	0.605	0.95
350_A	368_Y	0.604	0.95
273_T	277_K	0.602	0.95
181_H	196_V	0.601	0.95
303_L	307_H	0.600	0.95
119_K	148_N	0.600	0.95
296_Q	299_R	0.599	0.95
72_V	114_H	0.599	0.95
84_T	120_S	0.595	0.94
141_D	144_L	0.595	0.94
246_D	249_I	0.595	0.94
350_A	356_A	0.595	0.94
263_S	267_K	0.594	0.94
106_E	137_S	0.593	0.94
20_A	62_R	0.593	0.94
22_L	162_R	0.592	0.94
129_D	275_A	0.590	0.94
373_A	376_L	0.589	0.94
222_I	225_L	0.589	0.94
301_L	310_V	0.587	0.94
87_R	98_E	0.585	0.94
94_T	98_E	0.585	0.94
301_L	305_D	0.584	0.94
283_P	287_E	0.584	0.94
161_F	187_L	0.583	0.94
398_F	401_M	0.581	0.94
144_L	179_Q	0.581	0.94
372_A	394_L	0.579	0.93
342_Q	347_D	0.578	0.93
302_S	344_R	0.577	0.93
119_K	154_M	0.576	0.93
150_E	264_C	0.576	0.93
119_K	267_K	0.576	0.93
329_I	334_A	0.575	0.93
166_K	211_N	0.575	0.93
284_A	288_A	0.574	0.93
269_V	286_L	0.573	0.93
206_M	225_L	0.573	0.93
151_F	211_N	0.573	0.93
43_D	56_D	0.572	0.93
6_V	72_V	0.571	0.93
214_F	222_I	0.570	0.93
288_A	291_E	0.569	0.93
210_A	213_A	0.568	0.93
39_I	45_P	0.568	0.93
258_V	337_V	0.567	0.93
258_V	324_P	0.567	0.93
171_A	201_L	0.567	0.93
140_F	143_P	0.566	0.93
281_Y	292_V	0.565	0.93
228_I	232_L	0.564	0.93
44_A	52_A	0.563	0.93
227_N	230_K	0.563	0.93
304_L	310_V	0.562	0.92
367_T	378_D	0.562	0.92
351_Y	372_A	0.562	0.92
285_M	289_A	0.558	0.92
320_L	334_A	0.558	0.92
273_T	283_P	0.555	0.92
338_I	366_V	0.552	0.92
154_M	267_K	0.551	0.92
117_V	146_A	0.551	0.92
297_P	333_R	0.551	0.92
8_S	39_I	0.551	0.92
24_H	77_V	0.551	0.92
381_G	407_V	0.548	0.92
376_L	379_A	0.547	0.91
308_V	403_E	0.547	0.91
264_C	267_K	0.547	0.91
82_L	96_I	0.546	0.91
268_D	330_R	0.545	0.91
50_G	54_R	0.545	0.91
300_L	337_V	0.542	0.91
98_E	134_A	0.542	0.91
168_V	177_Y	0.541	0.91
169_F	177_Y	0.541	0.91
50_G	158_V	0.540	0.91
230_K	296_Q	0.539	0.91
119_K	166_K	0.539	0.91
22_L	189_A	0.539	0.91
116_V	143_P	0.539	0.91
220_S	285_M	0.538	0.91
212_N	323_K	0.538	0.91
184_F	188_L	0.538	0.91
307_H	381_G	0.535	0.91
118_V	135_L	0.535	0.91
36_V	39_I	0.535	0.91
225_L	229_C	0.535	0.91
87_R	90_G	0.534	0.90
251_G	255_R	0.534	0.90
284_A	287_E	0.532	0.90
24_H	183_V	0.530	0.90
341_L	348_V	0.530	0.90
11_V	330_R	0.529	0.90
198_E	242_A	0.527	0.90
374_G	378_D	0.527	0.90
9_G	12_G	0.525	0.90
226_G	230_K	0.524	0.90
371_S	390_E	0.524	0.90
106_E	110_G	0.524	0.90
83_P	267_K	0.523	0.90
75_T	78_T	0.523	0.90
37_A	67_T	0.523	0.90
85_P	328_D	0.522	0.89
69_Y	72_V	0.522	0.89
320_L	335_V	0.521	0.89
203_E	207_I	0.520	0.89
160_D	164_P	0.520	0.89
399_D	403_E	0.519	0.89
286_L	289_A	0.518	0.89
338_I	385_V	0.518	0.89
226_G	296_Q	0.517	0.89
400_A	404_R	0.517	0.89
342_Q	363_R	0.515	0.89
64_R	74_D	0.514	0.89
11_V	263_S	0.514	0.89
85_P	331_G	0.514	0.89
5_I	19_F	0.513	0.89
166_K	184_F	0.512	0.89
310_V	313_E	0.510	0.88
124_P	135_L	0.509	0.88
91_S	278_D	0.508	0.88
398_F	403_E	0.508	0.88
335_V	362_Q	0.507	0.88
212_N	264_C	0.507	0.88
260_W	289_A	0.506	0.88
244_A	252_R	0.505	0.88
17_A	21_E	0.505	0.88
338_I	348_V	0.504	0.88
31_V	67_T	0.504	0.88
144_L	171_A	0.503	0.88
10_Y	327_D	0.503	0.88
105_G	142_D	0.501	0.87
288_A	292_V	0.500	0.87
177_Y	180_L	0.500	0.87

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2y0cA	4	0.9906	100	0.245	Contact Map
2o3jA	4	0.9859	100	0.261	Contact Map
2q3eA	5	0.9883	100	0.265	Contact Map
3gg2A	3	0.9789	100	0.266	Contact Map
3g79A	2	0.9718	100	0.276	Contact Map
3ojoA	2	0.939	100	0.28	Contact Map
4a7pA	2	0.9789	100	0.288	Contact Map
4xr9A	2	0.9859	100	0.303	Contact Map
3vtfA	2	0.9671	100	0.307	Contact Map
1mv8A	2	0.9624	100	0.317	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0123 seconds.