Q9HQ90 - HALSA - GREMLIN Contacts

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Q9HQ90 - Uncharacterized protein

UniProt:	Q9HQ90	Sequences: MAAVDRNAAALGVPRAQLMESSGHAVGRAVKRVADPGASVAIVAGRGNNGGDAFAAARFLDDYAVSVSLLGRPESINDRISRANWDALQAGGYDTTTVRDAHALALDDPDVVVDALLGTGISGPPREPEATAIERINATDAPTVAVDVPSGLDADTGATPGSAVDADRVVTFHDTTPGLADHDHVTVADIGIPEAAETVVGPGDLLGVDRDPHGHKGDAGSVLVIGGGPYTGAPALCAQAALRAGADLVRLAVPDAVAAEVQGFDETFIVDSVVGTRLVEEHVPDLLARAEDADAVVIGPGLGDADTTQAAVAAFLAAFEGRAVVDADALTAVPDVETDATLVCTPHRGELQAMGGPTVDGSQPSRDAVEGFAAELGQTLLVTGARDVLSDGDTTRVNRSGTPGMTVGGTGDVLAGTAAAMLATQPPIQAASAAAYATGGAGERAAEARGHGLLATDICDALPAAIWGGQDA	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	472 (449)
Sequences:	3517 (2776)
Seq/√Len:	131.0

ECOLI - NNR
HALSA - Q9HQ90
SULSO - Q97WG6

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
53_A	115_A	5.150	1.00
381_L	435_A	4.709	1.00
297_V	415_A	4.472	1.00
297_V	419_A	3.964	1.00
23_G	55_A	3.801	1.00
125_P	133_I	3.232	1.00
418_A	434_A	3.161	1.00
26_V	146_V	3.055	1.00
222_V	419_A	3.015	1.00
402_T	443_E	2.859	1.00
226_G	234_P	2.844	1.00
20_E	58_R	2.839	1.00
43_V	136_I	2.713	1.00
88_L	93_Y	2.691	1.00
400_S	439_G	2.595	1.00
123_G	126_R	2.551	1.00
303_G	328_D	2.533	1.00
221_S	250_R	2.520	1.00
325_V	329_A	2.492	1.00
182_H	185_V	2.486	1.00
244_A	417_T	2.359	1.00
33_V	184_H	2.319	1.00
331_T	353_A	2.310	1.00
56_A	146_V	2.296	1.00
30_V	144_V	2.275	1.00
25_A	188_A	2.269	1.00
369_V	388_V	2.255	1.00
26_V	56_A	2.222	1.00
179_L	182_H	2.157	1.00
244_A	420_A	2.152	1.00
27_G	56_A	2.145	1.00
410_T	458_I	2.138	1.00
134_E	162_S	2.132	1.00
41_A	109_P	2.103	1.00
54_F	71_G	2.100	1.00
343_V	418_A	2.099	1.00
143_T	164_V	2.096	1.00
136_I	143_T	2.082	1.00
405_M	410_T	2.068	1.00
396_R	432_S	2.052	1.00
168_R	186_T	2.049	1.00
15_R	79_R	2.024	1.00
136_I	164_V	2.008	1.00
304_D	331_T	1.989	1.00
426_P	429_Q	1.987	1.00
39_S	110_D	1.982	1.00
338_T	342_L	1.981	1.00
153_D	160_P	1.906	1.00
248_L	408_G	1.904	1.00
169_V	183_D	1.895	1.00
343_V	422_L	1.890	1.00
116_L	133_I	1.875	1.00
222_V	246_A	1.856	1.00
31_K	63_Y	1.838	1.00
371_G	375_E	1.836	1.00
351_L	355_G	1.828	1.00
238_A	268_F	1.816	1.00
30_V	111_V	1.789	1.00
351_L	372_F	1.786	1.00
29_A	186_T	1.785	1.00
127_E	131_T	1.768	1.00
444_R	465_A	1.759	1.00
236_L	456_T	1.756	1.00
372_F	380_L	1.750	1.00
44_A	53_A	1.727	1.00
142_P	167_D	1.725	1.00
398_N	439_G	1.719	1.00
30_V	113_V	1.715	1.00
42_I	57_A	1.700	1.00
358_T	361_G	1.700	1.00
19_M	51_G	1.698	1.00
115_A	146_V	1.685	1.00
29_A	168_R	1.671	1.00
144_V	168_R	1.667	1.00
381_L	418_A	1.639	1.00
40_V	65_V	1.618	1.00
175_T	187_V	1.611	1.00
428_I	432_S	1.609	1.00
405_M	442_G	1.608	1.00
243_R	454_L	1.607	1.00
33_V	168_R	1.593	1.00
133_I	137_N	1.592	1.00
246_A	249_V	1.586	1.00
240_A	459_C	1.583	1.00
214_G	219_A	1.583	1.00
243_R	457_D	1.578	1.00
117_L	123_G	1.570	1.00
57_A	69_L	1.565	1.00
170_V	188_A	1.563	1.00
29_A	170_V	1.562	1.00
379_T	431_A	1.560	1.00
117_L	121_I	1.556	1.00
9_A	15_R	1.548	1.00
152_L	163_A	1.514	1.00
175_T	185_V	1.495	1.00
85_W	89_Q	1.493	1.00
417_T	434_A	1.486	1.00
445_A	461_A	1.483	1.00
157_G	178_G	1.481	1.00
265_D	268_F	1.469	1.00
415_A	419_A	1.469	1.00
407_V	455_A	1.464	1.00
369_V	390_S	1.451	1.00
163_A	181_D	1.441	1.00
417_T	462_L	1.438	1.00
3_A	6_R	1.435	1.00
226_G	300_P	1.430	1.00
298_I	325_V	1.429	1.00
30_V	56_A	1.425	1.00
222_V	241_A	1.424	1.00
117_L	150_S	1.421	1.00
425_Q	430_A	1.414	1.00
159_T	181_D	1.414	1.00
68_S	96_T	1.412	1.00
130_A	134_E	1.405	1.00
454_L	457_D	1.395	1.00
372_F	376_L	1.395	1.00
82_R	86_D	1.392	1.00
42_I	53_A	1.391	1.00
444_R	461_A	1.383	1.00
448_A	461_A	1.377	1.00
236_L	413_V	1.373	1.00
24_H	28_R	1.368	1.00
352_Q	362_S	1.363	1.00
127_E	130_A	1.361	1.00
442_G	445_A	1.356	1.00
295_A	419_A	1.347	1.00
300_P	415_A	1.338	1.00
404_G	453_L	1.338	1.00
324_V	422_L	1.329	1.00
344_C	380_L	1.323	1.00
26_V	172_F	1.319	1.00
396_R	428_I	1.318	1.00
351_L	382_V	1.314	1.00
210_R	219_A	1.308	1.00
238_A	251_L	1.302	1.00
61_D	93_Y	1.300	1.00
324_V	415_A	1.300	1.00
173_H	192_I	1.299	1.00
201_G	204_D	1.298	1.00
46_R	123_G	1.296	1.00
239_Q	460_D	1.294	1.00
224_V	234_P	1.290	1.00
222_V	295_A	1.288	1.00
3_A	7_N	1.280	1.00
343_V	431_A	1.268	1.00
267_T	456_T	1.264	1.00
133_I	150_S	1.259	1.00
204_D	207_G	1.257	1.00
370_E	395_T	1.253	1.00
24_H	59_F	1.250	1.00
312_V	332_A	1.248	1.00
413_V	459_C	1.247	1.00
153_D	156_T	1.247	1.00
388_V	395_T	1.244	1.00
355_G	372_F	1.236	1.00
39_S	68_S	1.223	1.00
371_G	374_A	1.219	1.00
159_T	163_A	1.208	0.99
250_R	269_I	1.205	0.99
338_T	341_T	1.204	0.99
372_F	378_Q	1.202	0.99
324_V	434_A	1.197	0.99
39_S	66_S	1.197	0.99
344_C	378_Q	1.184	0.99
224_V	237_C	1.176	0.99
241_A	249_V	1.171	0.99
440_G	443_E	1.170	0.99
41_A	70_L	1.168	0.99
55_A	58_R	1.166	0.99
230_Y	269_I	1.165	0.99
173_H	189_D	1.163	0.99
231_T	262_Q	1.159	0.99
117_L	126_R	1.155	0.99
305_A	308_T	1.145	0.99
46_R	75_S	1.144	0.99
130_A	162_S	1.143	0.99
16_A	83_A	1.142	0.99
239_Q	265_D	1.138	0.99
304_D	332_A	1.133	0.99
27_G	63_Y	1.131	0.99
7_N	10_A	1.131	0.99
42_I	56_A	1.124	0.99
298_I	315_F	1.122	0.99
348_R	366_R	1.122	0.99
222_V	423_A	1.119	0.99
124_P	160_P	1.119	0.99
351_L	368_A	1.116	0.99
379_T	392_G	1.108	0.99
404_G	443_E	1.105	0.99
445_A	457_D	1.103	0.99
251_L	261_V	1.103	0.99
367_D	371_G	1.098	0.99
112_V	136_I	1.093	0.99
234_P	251_L	1.088	0.99
61_D	88_L	1.084	0.99
436_Y	440_G	1.082	0.99
373_A	390_S	1.082	0.99
242_L	454_L	1.081	0.99
128_P	131_T	1.080	0.99
407_V	410_T	1.080	0.99
121_I	160_P	1.079	0.99
304_D	335_D	1.074	0.99
29_A	32_R	1.072	0.99
117_L	129_E	1.069	0.99
42_I	115_A	1.067	0.99
223_L	252_A	1.059	0.99
14_P	17_Q	1.055	0.99
76_I	81_S	1.054	0.99
17_Q	21_S	1.047	0.99
68_S	109_P	1.043	0.99
56_A	113_V	1.043	0.99
217_G	348_R	1.042	0.98
152_L	181_D	1.041	0.98
357_P	361_G	1.040	0.98
179_L	185_V	1.040	0.98
318_A	321_G	1.039	0.98
253_V	261_V	1.035	0.98
57_A	67_V	1.026	0.98
106_L	109_P	1.024	0.98
298_I	312_V	1.017	0.98
5_D	15_R	1.015	0.98
222_V	297_V	1.015	0.98
304_D	328_D	1.011	0.98
369_V	373_A	1.010	0.98
171_T	179_L	1.009	0.98
398_N	435_A	1.008	0.98
431_A	434_A	1.008	0.98
235_A	264_F	1.002	0.98
373_A	392_G	0.999	0.98
221_S	248_L	0.999	0.98
339_D	342_L	0.996	0.98
26_V	170_V	0.991	0.98
422_L	427_P	0.986	0.98
165_D	180_A	0.983	0.98
34_A	144_V	0.981	0.98
331_T	334_P	0.981	0.98
445_A	453_L	0.977	0.98
27_G	60_L	0.977	0.98
84_N	87_A	0.975	0.98
304_D	353_A	0.974	0.98
44_A	115_A	0.971	0.98
223_L	296_V	0.968	0.98
5_D	8_A	0.968	0.98
37_G	110_D	0.967	0.98
31_K	65_V	0.967	0.98
394_T	428_I	0.964	0.98
5_D	9_A	0.957	0.97
153_D	158_A	0.955	0.97
436_Y	439_G	0.954	0.97
40_V	111_V	0.954	0.97
448_A	464_A	0.953	0.97
223_L	293_A	0.950	0.97
54_F	88_L	0.948	0.97
72_R	75_S	0.944	0.97
71_G	85_W	0.943	0.97
408_G	455_A	0.942	0.97
44_A	54_F	0.938	0.97
401_G	443_E	0.937	0.97
348_R	363_Q	0.936	0.97
202_P	207_G	0.927	0.97
334_P	353_A	0.923	0.97
387_D	435_A	0.922	0.97
391_D	428_I	0.918	0.97
69_L	93_Y	0.918	0.97
29_A	33_V	0.916	0.97
343_V	381_L	0.915	0.97
210_R	404_G	0.915	0.97
421_M	437_A	0.914	0.97
400_S	436_Y	0.912	0.97
343_V	379_T	0.911	0.96
258_A	262_Q	0.907	0.96
200_V	204_D	0.904	0.96
55_A	84_N	0.904	0.96
381_L	431_A	0.903	0.96
253_V	257_V	0.902	0.96
398_N	436_Y	0.902	0.96
366_R	382_V	0.894	0.96
193_P	196_A	0.890	0.96
133_I	164_V	0.888	0.96
87_A	90_A	0.888	0.96
30_V	33_V	0.887	0.96
26_V	30_V	0.886	0.96
171_T	187_V	0.886	0.96
369_V	382_V	0.885	0.96
316_L	323_A	0.883	0.96
246_A	420_A	0.879	0.96
73_P	76_I	0.878	0.96
461_A	464_A	0.878	0.96
148_V	154_A	0.877	0.96
437_A	465_A	0.876	0.96
309_Q	335_D	0.876	0.96
54_F	81_S	0.869	0.95
237_C	297_V	0.868	0.95
221_S	294_D	0.866	0.95
420_A	424_T	0.865	0.95
30_V	34_A	0.864	0.95
172_F	188_A	0.863	0.95
38_A	110_D	0.860	0.95
141_A	167_D	0.859	0.95
363_Q	366_R	0.859	0.95
26_V	144_V	0.858	0.95
205_L	433_A	0.854	0.95
349_G	352_Q	0.854	0.95
16_A	55_A	0.853	0.95
200_V	207_G	0.852	0.95
29_A	188_A	0.852	0.95
390_S	395_T	0.850	0.95
69_L	88_L	0.850	0.95
328_D	331_T	0.849	0.95
359_V	363_Q	0.845	0.95
228_G	305_A	0.840	0.94
252_A	273_V	0.839	0.94
168_R	184_H	0.834	0.94
114_D	150_S	0.831	0.94
260_E	263_G	0.830	0.94
180_A	211_D	0.829	0.94
131_T	134_E	0.828	0.94
366_R	384_G	0.827	0.94
27_G	30_V	0.823	0.94
230_Y	248_L	0.822	0.94
143_T	167_D	0.822	0.94
86_D	89_Q	0.819	0.94
413_V	417_T	0.819	0.94
298_I	329_A	0.816	0.94
407_V	454_L	0.815	0.94
387_D	431_A	0.812	0.93
116_L	129_E	0.812	0.93
258_A	270_V	0.811	0.93
137_N	164_V	0.810	0.93
221_S	292_D	0.810	0.93
351_L	362_S	0.809	0.93
124_P	130_A	0.809	0.93
352_Q	359_V	0.806	0.93
145_A	164_V	0.806	0.93
441_A	445_A	0.806	0.93
248_L	269_I	0.804	0.93
323_A	342_L	0.802	0.93
295_A	422_L	0.802	0.93
226_G	237_C	0.801	0.93
145_A	166_A	0.801	0.93
379_T	391_D	0.801	0.93
405_M	443_E	0.800	0.93
20_E	55_A	0.800	0.93
27_G	59_F	0.797	0.93
76_I	85_W	0.792	0.93
221_S	269_I	0.791	0.93
442_G	453_L	0.789	0.92
111_V	144_V	0.788	0.92
250_R	271_D	0.786	0.92
322_R	422_L	0.784	0.92
405_M	458_I	0.783	0.92
46_R	117_L	0.780	0.92
202_P	205_L	0.777	0.92
222_V	249_V	0.777	0.92
325_V	342_L	0.777	0.92
21_S	59_F	0.776	0.92
84_N	88_L	0.776	0.92
35_D	65_V	0.775	0.92
54_F	69_L	0.774	0.92
224_V	249_V	0.774	0.92
369_V	380_L	0.772	0.92
342_L	378_Q	0.772	0.92
180_A	213_H	0.771	0.92
202_P	206_L	0.771	0.92
165_D	181_D	0.770	0.91
235_A	262_Q	0.766	0.91
239_Q	459_C	0.766	0.91
2_A	155_D	0.765	0.91
116_L	125_P	0.764	0.91
413_V	455_A	0.763	0.91
389_L	396_R	0.763	0.91
244_A	462_L	0.761	0.91
58_R	84_N	0.760	0.91
111_V	142_P	0.759	0.91
243_R	460_D	0.758	0.91
153_D	178_G	0.758	0.91
250_R	292_D	0.756	0.91
117_L	125_P	0.756	0.91
388_V	397_V	0.753	0.91
352_Q	358_T	0.753	0.91
77_N	81_S	0.753	0.91
37_G	65_V	0.751	0.90
7_N	11_L	0.749	0.90
312_V	333_V	0.749	0.90
125_P	160_P	0.749	0.90
348_R	359_V	0.747	0.90
137_N	165_D	0.747	0.90
440_G	444_R	0.745	0.90
308_T	332_A	0.744	0.90
146_V	172_F	0.740	0.90
152_L	159_T	0.738	0.90
309_Q	332_A	0.736	0.90
30_V	65_V	0.734	0.89
365_S	368_A	0.733	0.89
425_Q	431_A	0.731	0.89
38_A	65_V	0.730	0.89
195_A	198_T	0.730	0.89
452_G	463_P	0.729	0.89
42_I	113_V	0.728	0.89
16_A	87_A	0.728	0.89
400_S	443_E	0.725	0.89
16_A	84_N	0.725	0.89
355_G	362_S	0.722	0.89
389_L	435_A	0.721	0.89
9_A	13_V	0.721	0.89
387_D	438_T	0.718	0.88
189_D	193_P	0.717	0.88
379_T	427_P	0.717	0.88
231_T	257_V	0.717	0.88
441_A	461_A	0.715	0.88
246_A	423_A	0.713	0.88
173_H	190_I	0.712	0.88
329_A	333_V	0.712	0.88
366_R	386_R	0.712	0.88
288_A	291_E	0.711	0.88
224_V	297_V	0.711	0.88
239_Q	264_F	0.710	0.88
14_P	83_A	0.709	0.88
142_P	168_R	0.708	0.88
427_P	430_A	0.707	0.88
355_G	368_A	0.706	0.88
296_V	315_F	0.706	0.88
86_D	90_A	0.706	0.88
401_G	439_G	0.706	0.88
258_A	272_S	0.704	0.87
123_G	160_P	0.704	0.87
261_V	265_D	0.700	0.87
315_F	323_A	0.700	0.87
121_I	161_G	0.699	0.87
287_L	290_A	0.698	0.87
386_R	397_V	0.698	0.87
228_G	254_P	0.698	0.87
25_A	28_R	0.693	0.87
199_V	399_R	0.693	0.87
391_D	394_T	0.692	0.87
13_V	193_P	0.692	0.87
396_R	429_Q	0.691	0.86
78_D	82_R	0.691	0.86
30_V	40_V	0.690	0.86
214_G	218_D	0.689	0.86
32_R	186_T	0.688	0.86
294_D	423_A	0.687	0.86
256_A	275_G	0.685	0.86
235_A	265_D	0.685	0.86
173_H	197_E	0.685	0.86
445_A	459_C	0.685	0.86
16_A	20_E	0.682	0.86
298_I	302_L	0.681	0.86
214_G	406_T	0.680	0.86
21_S	24_H	0.677	0.85
83_A	86_D	0.677	0.85
251_L	268_F	0.677	0.85
40_V	60_L	0.676	0.85
370_E	374_A	0.676	0.85
352_Q	357_P	0.676	0.85
310_A	313_A	0.674	0.85
54_F	85_W	0.671	0.85
33_V	144_V	0.670	0.85
229_P	269_I	0.669	0.85
240_A	417_T	0.669	0.85
325_V	333_V	0.668	0.85
8_A	193_P	0.667	0.84
418_A	430_A	0.666	0.84
400_S	440_G	0.665	0.84
180_A	212_P	0.664	0.84
458_I	461_A	0.663	0.84
16_A	79_R	0.662	0.84
200_V	205_L	0.662	0.84
158_A	364_P	0.661	0.84
355_G	376_L	0.660	0.84
429_Q	432_S	0.659	0.84
71_G	76_I	0.656	0.83
368_A	372_F	0.656	0.83
20_E	84_N	0.655	0.83
408_G	454_L	0.654	0.83
297_V	300_P	0.650	0.83
357_P	362_S	0.649	0.83
358_T	362_S	0.649	0.83
42_I	67_V	0.648	0.83
17_Q	87_A	0.647	0.83
149_P	166_A	0.646	0.83
5_D	119_T	0.645	0.82
444_R	464_A	0.644	0.82
253_V	270_V	0.642	0.82
224_V	419_A	0.642	0.82
87_A	91_G	0.641	0.82
140_D	143_T	0.640	0.82
440_G	465_A	0.639	0.82
421_M	430_A	0.637	0.82
313_A	317_A	0.636	0.82
398_N	443_E	0.636	0.82
437_A	466_I	0.635	0.81
420_A	423_A	0.634	0.81
421_M	434_A	0.634	0.81
34_A	168_R	0.634	0.81
5_D	77_N	0.633	0.81
424_T	451_H	0.633	0.81
308_T	311_A	0.627	0.81
201_G	206_L	0.626	0.81
348_R	384_G	0.626	0.81
250_R	293_A	0.623	0.80
295_A	322_R	0.621	0.80
125_P	161_G	0.619	0.80
149_P	179_L	0.618	0.80
237_C	415_A	0.618	0.80
9_A	16_A	0.612	0.79
2_A	119_T	0.610	0.79
402_T	405_M	0.610	0.79
242_L	249_V	0.605	0.78
359_V	362_S	0.605	0.78
117_L	133_I	0.604	0.78
112_V	141_A	0.602	0.78
40_V	56_A	0.602	0.78
83_A	87_A	0.602	0.78
88_L	91_G	0.601	0.78
212_P	403_P	0.601	0.78
41_A	106_L	0.601	0.78
351_L	380_L	0.600	0.78
194_E	198_T	0.599	0.78
349_G	359_V	0.599	0.78
327_A	331_T	0.597	0.77
225_I	298_I	0.596	0.77
106_L	135_R	0.596	0.77
310_A	314_A	0.596	0.77
132_A	135_R	0.596	0.77
225_I	302_L	0.595	0.77
156_T	178_G	0.595	0.77
127_E	133_I	0.595	0.77
242_L	269_I	0.594	0.77
26_V	29_A	0.594	0.77
200_V	206_L	0.593	0.77
444_R	447_E	0.590	0.77
135_R	139_T	0.589	0.76
314_A	318_A	0.589	0.76
302_L	308_T	0.587	0.76
170_V	186_T	0.586	0.76
317_A	337_E	0.584	0.76
235_A	239_Q	0.583	0.76
264_F	268_F	0.582	0.76
87_A	93_Y	0.580	0.75
428_I	431_A	0.580	0.75
401_G	405_M	0.580	0.75
57_A	93_Y	0.579	0.75
152_L	182_H	0.579	0.75
211_D	214_G	0.579	0.75
58_R	87_A	0.577	0.75
427_P	431_A	0.577	0.75
28_R	188_A	0.576	0.75
240_A	408_G	0.576	0.75
6_R	10_A	0.575	0.75
166_A	183_D	0.575	0.75
449_R	463_P	0.573	0.74
373_A	378_Q	0.573	0.74
44_A	69_L	0.570	0.74
247_D	438_T	0.570	0.74
262_Q	266_E	0.569	0.74
2_A	5_D	0.568	0.74
333_V	344_C	0.568	0.74
221_S	293_A	0.567	0.74
456_T	459_C	0.567	0.74
122_S	153_D	0.567	0.74
225_I	315_F	0.567	0.74
41_A	112_V	0.566	0.74
249_V	419_A	0.565	0.73
267_T	407_V	0.565	0.73
302_L	312_V	0.564	0.73
407_V	442_G	0.563	0.73
257_V	262_Q	0.563	0.73
201_G	205_L	0.562	0.73
294_D	321_G	0.560	0.73
250_R	289_R	0.560	0.73
231_T	266_E	0.558	0.72
269_I	408_G	0.558	0.72
373_A	377_G	0.558	0.72
71_G	81_S	0.556	0.72
139_T	143_T	0.556	0.72
381_L	434_A	0.555	0.72
408_G	458_I	0.555	0.72
369_V	381_L	0.554	0.72
11_L	21_S	0.553	0.72
34_A	111_V	0.553	0.72
163_A	178_G	0.552	0.72
221_S	230_Y	0.552	0.72
445_A	465_A	0.552	0.72
421_M	424_T	0.551	0.72
453_L	457_D	0.550	0.71
459_C	462_L	0.550	0.71
324_V	343_V	0.548	0.71
462_L	466_I	0.547	0.71
56_A	144_V	0.547	0.71
379_T	428_I	0.546	0.71
78_D	81_S	0.546	0.71
200_V	432_S	0.544	0.71
285_D	288_A	0.544	0.71
121_I	150_S	0.543	0.70
72_R	76_I	0.542	0.70
320_E	339_D	0.542	0.70
8_A	192_I	0.541	0.70
20_E	59_F	0.541	0.70
200_V	389_L	0.541	0.70
217_G	248_L	0.540	0.70
237_C	300_P	0.540	0.70
449_R	460_D	0.538	0.70
20_E	87_A	0.538	0.70
351_L	390_S	0.538	0.70
306_D	310_A	0.538	0.70
320_E	338_T	0.537	0.70
154_A	178_G	0.536	0.69
27_G	31_K	0.536	0.69
137_N	143_T	0.534	0.69
5_D	14_P	0.534	0.69
199_V	205_L	0.533	0.69
379_T	387_D	0.533	0.69
155_D	177_P	0.533	0.69
28_R	63_Y	0.531	0.69
242_L	267_T	0.529	0.68
226_G	233_A	0.529	0.68
362_S	382_V	0.529	0.68
134_E	138_A	0.527	0.68
437_A	462_L	0.527	0.68
84_N	91_G	0.527	0.68
54_F	84_N	0.526	0.68
255_D	272_S	0.525	0.68
62_D	91_G	0.524	0.68
4_V	196_A	0.524	0.68
5_D	193_P	0.522	0.67
51_G	84_N	0.522	0.67
441_A	465_A	0.521	0.67
374_A	393_D	0.521	0.67
231_T	260_E	0.520	0.67
112_V	139_T	0.520	0.67
121_I	125_P	0.519	0.67
133_I	143_T	0.519	0.67
306_D	309_Q	0.518	0.67
223_L	286_L	0.517	0.67
81_S	84_N	0.517	0.67
119_T	154_A	0.517	0.67
248_L	292_D	0.517	0.67
70_L	96_T	0.517	0.67
398_N	425_Q	0.516	0.67
5_D	17_Q	0.516	0.67
217_G	221_S	0.515	0.66
247_D	387_D	0.515	0.66
123_G	127_E	0.515	0.66
51_G	79_R	0.514	0.66
177_P	388_V	0.514	0.66
69_L	95_T	0.513	0.66
305_A	332_A	0.513	0.66
369_V	395_T	0.512	0.66
362_S	368_A	0.512	0.66
320_E	341_T	0.511	0.66
239_Q	456_T	0.511	0.66
201_G	207_G	0.511	0.66
300_P	403_P	0.510	0.66
59_F	62_D	0.507	0.65
122_S	126_R	0.507	0.65
5_D	18_L	0.507	0.65
341_T	422_L	0.507	0.65
399_R	436_Y	0.506	0.65
139_T	164_V	0.506	0.65
249_V	268_F	0.506	0.65
398_N	401_G	0.506	0.65
330_L	372_F	0.506	0.65
125_P	130_A	0.505	0.65
33_V	186_T	0.504	0.65
213_H	363_Q	0.504	0.65
329_A	332_A	0.504	0.65
267_T	455_A	0.502	0.64
452_G	466_I	0.502	0.64
6_R	325_V	0.502	0.64
15_R	119_T	0.501	0.64
121_I	127_E	0.501	0.64
355_G	380_L	0.500	0.64

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3rssA	4	0.9873	100	0.27	Contact Map
3k5wA	4	0.9131	100	0.294	Contact Map
3bgkA	3	0.5593	100	0.651	Contact Map
2o8nA	2	0.4407	100	0.654	Contact Map
1jztA	2	0.4555	100	0.655	Contact Map
3d3kA	2	0.428	100	0.671	Contact Map
3d3jA	2	0.4258	100	0.672	Contact Map
3rpzA	3	0.5699	100	0.675	Contact Map
2r3bA	3	0.5805	100	0.675	Contact Map
3nl6A	4	0.8877	100	0.785	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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