GREMLIN Database
BAT - Bacterioopsin transcriptional activator
UniProt: Q9HPU8 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 674 (522)
Sequences: 279 (262)
Seq/√Len: 11.5

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
157_R161_E4.2111.00
478_A481_T3.7300.99
478_A508_P3.7240.99
481_T508_P3.6570.99
592_V631_S3.5960.98
169_I270_M3.5470.98
479_T511_V3.5140.98
598_H601_D3.3400.97
211_G237_R3.3340.97
214_T237_R3.2370.97
212_P237_R3.0040.95
235_V276_M2.9680.95
196_Y241_R2.9180.94
597_Y601_D2.8020.93
516_L574_T2.7450.92
443_S447_A2.7370.92
272_V276_M2.6990.91
612_E616_D2.6880.91
468_T593_E2.6570.91
475_L515_A2.5310.88
468_T631_S2.4980.88
460_N463_V2.4550.87
439_T442_A2.4260.86
507_D521_V2.4240.86
479_T483_F2.4160.86
631_S638_R2.4080.86
457_T461_I2.4030.86
468_T592_V2.3680.85
631_S645_L2.3560.84
200_E241_R2.3450.84
484_E512_V2.3080.83
468_T472_L2.2940.83
313_R444_I2.2810.82
593_E631_S2.2740.82
591_D631_S2.2610.82
469_A508_P2.2610.82
471_F476_A2.2610.82
196_Y200_E2.2250.81
479_T482_T2.2240.81
480_D631_S2.2180.80
615_N640_A2.2070.80
508_P522_Q2.2060.80
472_L478_A2.2040.80
480_D577_A2.1900.80
594_L597_Y2.1780.79
449_T454_A2.1710.79
468_T508_P2.1650.79
652_V663_A2.1100.77
553_G631_S2.0540.75
593_E613_L2.0060.73
473_V631_S2.0050.73
468_T478_A1.9720.72
471_F480_D1.9640.71
476_A480_D1.9570.71
276_M279_Q1.9520.71
476_A516_L1.9460.71
461_I464_E1.9280.70
517_G577_A1.9200.70
464_E472_L1.9130.69
652_V659_H1.8980.69
172_T267_G1.8740.68
468_T481_T1.8550.67
211_G214_T1.8450.66
594_L659_H1.8280.66
461_I467_D1.7960.64
469_A475_L1.7780.63
249_Q270_M1.7760.63
249_Q275_R1.7560.62
597_Y600_D1.7310.61
468_T613_L1.7270.61
272_V279_Q1.7090.60
254_P264_H1.7090.60
190_F211_G1.6940.60
465_L468_T1.6930.59
469_A520_A1.6880.59
311_A446_D1.6710.58
167_A171_I1.6650.58
585_L610_R1.6540.58
468_T591_D1.6420.57
504_P617_L1.6320.57
581_V655_T1.6170.56
592_V613_L1.6160.56
150_D154_E1.6090.55
553_G593_E1.6060.55
646_A649_M1.6010.55
479_T617_L1.5920.55
183_I203_G1.5810.54
464_E478_A1.5810.54
335_F406_V1.5770.54
275_R279_Q1.5750.54
458_V461_I1.5720.54
446_D449_T1.5680.53
504_P613_L1.5640.53
482_T651_I1.5610.53
476_A591_D1.5500.53
187_N237_R1.5470.52
468_T471_F1.5460.52
473_V593_E1.5390.52
581_V656_Y1.5350.52
329_E425_I1.5330.52
474_E480_D1.5240.51
468_T658_Q1.5110.51
332_G425_I1.5070.50
479_T659_H1.5040.50
515_A520_A1.5020.50
475_L508_P1.5000.50
480_D516_L1.4990.50
472_L475_L1.4950.50
388_D393_S1.4840.49
429_E437_G1.4750.49
633_Y638_R1.4660.48
475_L509_Q1.4590.48
638_R641_E1.4410.47
519_D629_Y1.4390.47
311_A449_T1.4380.47
436_L446_D1.4360.47
514_T651_I1.4350.47
480_D574_T1.4250.46
468_T509_Q1.4230.46
591_D653_P1.4210.46
446_D450_R1.4130.46
596_A613_L1.4120.46
577_A633_Y1.4110.46
465_L476_A1.4070.46
638_R645_L1.4060.46
164_L185_Y1.4060.46
578_A659_H1.4050.45
472_L517_G1.3970.45
475_L522_Q1.3930.45
644_Q649_M1.3920.45
470_L577_A1.3910.45
509_Q520_A1.3910.45
483_F516_L1.3790.44
477_G649_M1.3780.44
517_G631_S1.3760.44
480_D524_A1.3730.44
484_E515_A1.3690.44
593_E596_A1.3650.44
127_I131_I1.3560.43
508_P513_D1.3490.43
469_A474_E1.3460.43
415_V418_V1.3410.42
482_T574_T1.3390.42
655_T659_H1.3340.42
508_P659_H1.3340.42
577_A655_T1.3300.42
153_V262_V1.3200.41
475_L505_H1.3190.41
471_F482_T1.3170.41
476_A482_T1.3100.41
475_L507_D1.3040.41
237_R247_W1.3030.41
509_Q522_Q1.2940.40
159_L267_G1.2880.40
468_T655_T1.2880.40
612_E644_Q1.2880.40
533_E652_V1.2840.40
550_S645_L1.2820.40
471_F591_D1.2810.40
425_I446_D1.2710.39
580_R651_I1.2710.39
475_L520_A1.2680.39
471_F592_V1.2650.39
324_I333_A1.2640.39
235_V272_V1.2610.39
474_E513_D1.2540.38
464_E629_Y1.2520.38
508_P591_D1.2510.38
475_L479_T1.2490.38
474_E631_S1.2480.38
308_V311_A1.2460.38
185_Y247_W1.2440.38
533_E659_H1.2410.38
450_R454_A1.2380.38
401_C418_V1.2340.37
471_F516_L1.2330.37
485_Q507_D1.2310.37
511_V574_T1.2300.37
613_L631_S1.2280.37
325_G425_I1.2270.37
475_L583_S1.2270.37
484_E608_G1.2270.37
546_V577_A1.2230.37
472_L631_S1.2210.37
483_F659_H1.2200.37
468_T633_Y1.2190.37
260_G267_G1.2160.37
622_L625_L1.2110.36
471_F574_T1.2100.36
472_L481_T1.2050.36
509_Q513_D1.2040.36
481_T523_D1.2040.36
480_D591_D1.2030.36
163_A187_N1.2030.36
332_G419_S1.2010.36
535_V578_A1.2010.36
592_V645_L1.2010.36
464_E591_D1.1990.36
508_P523_D1.1930.35
480_D592_V1.1910.35
472_L484_E1.1900.35
181_E193_I1.1880.35
591_D629_Y1.1840.35
477_G646_A1.1830.35
476_A592_V1.1830.35
404_V525_E1.1820.35
588_K646_A1.1800.35
419_S425_I1.1770.35
468_T476_A1.1770.35
476_A514_T1.1760.35
524_A577_A1.1640.34
613_L645_L1.1600.34
163_A173_I1.1580.34
374_L415_V1.1560.34
616_D646_A1.1480.33
316_I446_D1.1440.33
614_R649_M1.1340.33
478_A629_Y1.1310.33
553_G592_V1.1300.33
401_C417_A1.1270.33
507_D583_S1.1270.33
126_A130_R1.1250.32
655_T658_Q1.1240.32
316_I429_E1.1230.32
509_Q523_D1.1180.32
596_A631_S1.1150.32
471_F643_K1.1140.32
164_L197_S1.1130.32
577_A645_L1.1110.32
588_K616_D1.1110.32
469_A509_Q1.1090.32
467_D481_T1.1030.32
479_T507_D1.1000.31
612_E646_A1.0990.31
517_G638_R1.0980.31
464_E592_V1.0950.31
546_V590_A1.0880.31
475_L523_D1.0860.31
163_A264_H1.0850.31
465_L471_F1.0850.31
475_L504_P1.0780.30
472_L550_S1.0730.30
480_D630_V1.0720.30
471_F513_D1.0720.30
472_L508_P1.0680.30
469_A522_Q1.0650.30
252_I265_Y1.0650.30
252_I264_H1.0640.30
638_R655_T1.0600.30
631_S658_Q1.0600.30
514_T574_T1.0580.30
588_K612_E1.0580.30
476_A574_T1.0570.30
629_Y661_Q1.0550.30
521_V651_I1.0540.29
471_F479_T1.0490.29
181_E271_D1.0430.29
211_G245_L1.0420.29
458_V462_G1.0370.29
479_T630_V1.0370.29
592_V629_Y1.0300.29
475_L485_Q1.0280.28
461_I659_H1.0270.28
617_L621_Q1.0220.28
474_E508_P1.0090.28
579_R643_K1.0090.28
464_E580_R1.0070.28
480_D593_E1.0070.28
483_F515_A1.0040.27
483_F579_R1.0010.27
481_T591_D1.0000.27
173_I264_H0.9970.27
477_G482_T0.9960.27
485_Q522_Q0.9960.27
588_K644_Q0.9910.27
473_V553_G0.9900.27
531_D581_V0.9900.27
468_T553_G0.9870.27
508_P583_S0.9860.27
240_R244_S0.9850.27
563_R620_R0.9820.27
159_L162_Q0.9820.27
477_G644_Q0.9800.27
465_L508_P0.9790.27
538_F542_S0.9760.26
172_T186_I0.9750.26
474_E481_T0.9700.26
405_P412_T0.9680.26
591_D638_R0.9670.26
126_A137_A0.9630.26
473_V606_P0.9600.26
475_L631_S0.9580.26
505_H508_P0.9560.26
471_F474_E0.9510.25
324_I436_L0.9510.25
478_A482_T0.9510.25
573_G578_A0.9480.25
468_T475_L0.9460.25
170_G193_I0.9460.25
587_D591_D0.9450.25
475_L658_Q0.9440.25
313_R316_I0.9420.25
475_L597_Y0.9410.25
439_T449_T0.9410.25
616_D644_Q0.9410.25
440_T448_L0.9400.25
196_Y209_L0.9380.25
614_R646_A0.9380.25
439_T446_D0.9370.25
618_T621_Q0.9370.25
477_G588_K0.9360.25
469_A652_V0.9360.25
468_T596_A0.9350.25
485_Q509_Q0.9320.25
480_D484_E0.9300.25
170_G248_N0.9280.25
517_G581_V0.9270.25
594_L601_D0.9250.25
471_F577_A0.9210.24
174_S252_I0.9200.24
484_E507_D0.9200.24
235_V663_A0.9180.24
156_E161_E0.9120.24
482_T577_A0.9070.24
469_A480_D0.9070.24
321_T324_I0.9050.24
593_E597_Y0.9020.24
512_V577_A0.9020.24
515_A606_P0.8980.24
612_E642_G0.8980.24
189_S193_I0.8970.23
511_V524_A0.8940.23
526_V577_A0.8910.23
131_I135_A0.8910.23
308_V446_D0.8890.23
472_L606_P0.8880.23
464_E469_A0.8870.23
475_L650_D0.8860.23
479_T655_T0.8860.23
469_A479_T0.8860.23
468_T484_E0.8820.23
169_I189_S0.8810.23
517_G526_V0.8790.23
447_A450_R0.8790.23
475_L484_E0.8740.23
127_I161_E0.8740.23
483_F597_Y0.8730.23
307_L446_D0.8730.23
591_D661_Q0.8700.23
550_S577_A0.8700.23
214_T267_G0.8680.22
511_V516_L0.8650.22
196_Y254_P0.8620.22
582_L608_G0.8620.22
464_E481_T0.8600.22
588_K614_R0.8580.22
478_A523_D0.8550.22
505_H520_A0.8550.22
573_G659_H0.8540.22
464_E468_T0.8530.22
396_A415_V0.8530.22
477_G584_T0.8510.22
478_A641_E0.8510.22
588_K649_M0.8500.22
616_D649_M0.8500.22
303_V316_I0.8490.22
187_N214_T0.8490.22
370_A379_E0.8460.22
465_L512_V0.8400.22
472_L638_R0.8400.22
480_D653_P0.8370.21
172_T252_I0.8370.21
483_F574_T0.8350.21
175_D180_E0.8340.21
468_T517_G0.8340.21
150_D153_V0.8330.21
498_L502_T0.8320.21
307_L428_R0.8300.21
211_G252_I0.8300.21
592_V640_A0.8290.21
580_R631_S0.8280.21
592_V630_V0.8270.21
451_R454_A0.8200.21
420_T425_I0.8190.21
475_L659_H0.8160.21
404_V445_N0.8160.21
587_D638_R0.8140.21
320_I425_I0.8110.21
587_D631_S0.8110.21
612_E649_M0.8110.21
467_D508_P0.8110.21
243_G278_A0.8080.21
157_R164_L0.8080.21
653_P657_H0.8080.21
471_F617_L0.8070.20
584_T614_R0.8070.20
325_G333_A0.8070.20
625_L630_V0.8050.20
476_A631_S0.8020.20
600_D659_H0.8010.20
333_A423_H0.8010.20
308_V425_I0.8010.20
574_T577_A0.8010.20
474_E522_Q0.8000.20
481_T631_S0.7980.20
592_V638_R0.7970.20
331_A405_P0.7950.20
510_A579_R0.7950.20
519_D651_I0.7940.20
473_V596_A0.7890.20
468_T597_Y0.7870.20
468_T480_D0.7870.20
276_M282_L0.7850.20
513_D523_D0.7820.20
517_G580_R0.7810.20
435_S439_T0.7800.20
461_I507_D0.7790.20
633_Y639_R0.7760.19
592_V653_P0.7740.19
517_G587_D0.7720.19
407_T412_T0.7700.19
480_D513_D0.7700.19
415_V419_S0.7680.19
304_T446_D0.7680.19
514_T577_A0.7680.19
317_E470_L0.7650.19
597_Y659_H0.7640.19
457_T462_G0.7630.19
162_Q174_S0.7620.19
598_H659_H0.7600.19
482_T508_P0.7600.19
507_D631_S0.7600.19
508_P613_L0.7600.19
156_E159_L0.7590.19
475_L615_N0.7590.19
401_C415_V0.7590.19
161_E164_L0.7590.19
593_E658_Q0.7580.19
482_T514_T0.7570.19
235_V252_I0.7560.19
153_V256_Y0.7550.19
508_P621_Q0.7550.19
400_A421_A0.7520.19
273_S314_E0.7500.19
601_D659_H0.7460.19
149_S158_R0.7460.19
474_E523_D0.7460.19
461_I479_T0.7430.18
614_R644_Q0.7430.18
577_A580_R0.7410.18
403_L619_D0.7410.18
520_A652_V0.7400.18
465_L479_T0.7380.18
214_T236_L0.7370.18
163_A174_S0.7350.18
234_V237_R0.7330.18
311_A450_R0.7330.18
329_E403_L0.7330.18
520_A606_P0.7310.18
166_E254_P0.7310.18
243_G275_R0.7290.18
481_T484_E0.7290.18
441_G450_R0.7290.18
478_A631_S0.7280.18
375_Q429_E0.7270.18
413_Y425_I0.7270.18
464_E631_S0.7260.18
474_E509_Q0.7260.18
584_T646_A0.7260.18
214_T252_I0.7250.18
271_D279_Q0.7250.18
187_N243_G0.7240.18
324_I401_C0.7230.18
472_L485_Q0.7220.18
586_R591_D0.7220.18
482_T516_L0.7200.18
508_P643_K0.7190.18
469_A481_T0.7190.18
484_E628_A0.7190.18
468_T650_D0.7180.18
130_R134_S0.7180.18
349_E352_G0.7180.18
471_F653_P0.7170.18
513_D643_K0.7170.18
333_A434_R0.7170.18
504_P608_G0.7170.18
626_Q646_A0.7160.18
500_L503_T0.7150.18
468_T638_R0.7140.18
621_Q630_V0.7120.18
477_G614_R0.7100.18
475_L546_V0.7080.17
187_N211_G0.7070.17
378_V400_A0.7060.17
480_D613_L0.7050.17
195_G200_E0.7030.17
509_Q643_K0.7030.17
124_T137_A0.7020.17
307_L317_E0.7020.17
464_E577_A0.7010.17
473_V517_G0.7010.17
160_K164_L0.6980.17
657_H662_A0.6980.17
164_L440_T0.6980.17
330_Y425_I0.6970.17
480_D658_Q0.6970.17
509_Q515_A0.6970.17
172_T187_N0.6930.17
517_G550_S0.6930.17
508_P520_A0.6920.17
166_E171_I0.6920.17
167_A170_G0.6910.17
468_T473_V0.6910.17
312_D317_E0.6890.17
482_T649_M0.6880.17
201_V444_I0.6870.17
521_V580_R0.6860.17
508_P555_R0.6860.17
461_I613_L0.6850.17
468_T504_P0.6840.17
507_D512_V0.6830.17
582_L663_A0.6820.17
310_A331_A0.6800.17
479_T651_I0.6780.17
592_V596_A0.6770.17
464_E638_R0.6720.16
476_A584_T0.6720.16
508_P630_V0.6710.16
471_F508_P0.6700.16
389_A410_S0.6700.16
162_Q173_I0.6690.16
426_D445_N0.6680.16
125_A130_R0.6670.16
186_I193_I0.6660.16
476_A617_L0.6650.16
517_G591_D0.6640.16
517_G645_L0.6640.16
469_A651_I0.6640.16
520_A625_L0.6630.16
531_D594_L0.6630.16
472_L630_V0.6620.16
474_E520_A0.6610.16
465_L480_D0.6610.16
282_L289_L0.6600.16
512_V643_K0.6580.16
483_F555_R0.6580.16
149_S153_V0.6580.16
262_V275_R0.6580.16
502_T652_V0.6570.16
517_G655_T0.6560.16
170_G269_Q0.6540.16
316_I439_T0.6530.16
183_I206_H0.6520.16
480_D550_S0.6520.16
203_G211_G0.6510.16
473_V645_L0.6500.16
505_H522_Q0.6490.16
482_T593_E0.6470.16
475_L480_D0.6460.16
508_P542_S0.6460.16
471_F512_V0.6460.16
629_Y642_G0.6450.16
453_I458_V0.6430.16
484_E514_T0.6420.16
153_V157_R0.6420.16
469_A514_T0.6410.16
508_P631_S0.6390.16
534_S589_Y0.6380.16
616_D642_G0.6370.16
504_P512_V0.6370.16
299_L437_G0.6360.16
585_L617_L0.6320.15
469_A472_L0.6310.15
630_V659_H0.6300.15
484_E553_G0.6290.15
162_Q172_T0.6270.15
539_D606_P0.6270.15
553_G596_A0.6250.15
468_T514_T0.6240.15
504_P630_V0.6230.15
466_S472_L0.6230.15
505_H592_V0.6220.15
469_A658_Q0.6220.15
158_R161_E0.6220.15
581_V615_N0.6210.15
416_L562_D0.6190.15
240_R246_F0.6180.15
577_A631_S0.6170.15
472_L591_D0.6140.15
481_T652_V0.6140.15
468_T523_D0.6110.15
384_L398_G0.6110.15
312_D400_A0.6100.15
471_F631_S0.6100.15
515_A659_H0.6090.15
174_S183_I0.6080.15
471_F651_I0.6080.15
152_T156_E0.6060.15
514_T592_V0.6050.15
210_Q232_T0.6040.15
194_T323_R0.6040.15
246_F262_V0.6040.15
164_L313_R0.6040.15
171_I194_T0.6020.15
473_V658_Q0.6010.15
489_I538_F0.6000.15
254_P265_Y0.6000.15
222_F498_L0.6000.15
485_Q580_R0.6000.15
194_T238_N0.5980.15
469_A606_P0.5960.15
213_K383_A0.5950.15
518_Y531_D0.5950.15
146_M150_D0.5930.14
316_I419_S0.5930.14
468_T507_D0.5920.14
514_T593_E0.5910.14
183_I252_I0.5900.14
465_L474_E0.5890.14
479_T639_R0.5880.14
632_G635_E0.5880.14
480_D509_Q0.5880.14
261_T314_E0.5880.14
334_W415_V0.5870.14
171_I181_E0.5870.14
508_P615_N0.5860.14
175_D274_E0.5850.14
484_E577_A0.5850.14
466_S526_V0.5840.14
480_D645_L0.5840.14
520_A584_T0.5830.14
533_E582_L0.5820.14
485_Q520_A0.5820.14
213_K279_Q0.5820.14
195_G444_I0.5810.14
235_V260_G0.5810.14
227_T434_R0.5810.14
538_F573_G0.5800.14
507_D515_A0.5800.14
460_N655_T0.5790.14
522_Q621_Q0.5790.14
469_A533_E0.5790.14
479_T592_V0.5790.14
476_A651_I0.5780.14
470_L628_A0.5780.14
188_D192_D0.5780.14
127_I130_R0.5780.14
267_G432_L0.5770.14
236_L252_I0.5750.14
471_F514_T0.5750.14
520_A532_D0.5750.14
172_T237_R0.5740.14
480_D485_Q0.5740.14
469_A643_K0.5730.14
521_V591_D0.5720.14
475_L630_V0.5710.14
461_I472_L0.5700.14
347_V351_A0.5690.14
173_I179_P0.5690.14
400_A417_A0.5680.14
251_D264_H0.5670.14
592_V661_Q0.5660.14
447_A454_A0.5660.14
329_E377_V0.5650.14
250_V269_Q0.5640.14
555_R613_L0.5630.14
381_R405_P0.5630.14
587_D630_V0.5620.14
154_E455_T0.5610.14
168_P266_V0.5610.14
172_T190_F0.5600.14
585_L644_Q0.5580.14
542_S579_R0.5580.14
474_E628_A0.5570.14
196_Y252_I0.5560.14
196_Y240_R0.5560.14
479_T574_T0.5560.14
617_L626_Q0.5560.14
130_R272_V0.5540.14
163_A383_A0.5540.14
187_N247_W0.5540.14
632_G638_R0.5540.14
476_A630_V0.5530.14
473_V478_A0.5520.13
280_Q382_E0.5520.13
477_G480_D0.5520.13
516_L584_T0.5510.13
475_L481_T0.5500.13
555_R596_A0.5500.13
172_T264_H0.5490.13
183_I194_T0.5480.13
157_R160_K0.5470.13
163_A483_F0.5470.13
528_V613_L0.5450.13
469_A583_S0.5420.13
580_R645_L0.5420.13
630_V638_R0.5420.13
580_R584_T0.5420.13
437_G624_A0.5410.13
266_V650_D0.5400.13
445_N448_L0.5400.13
215_N222_F0.5400.13
482_T512_V0.5370.13
594_L598_H0.5370.13
504_P628_A0.5370.13
478_A652_V0.5360.13
542_S590_A0.5350.13
329_E423_H0.5350.13
170_G262_V0.5340.13
469_A592_V0.5340.13
584_T644_Q0.5340.13
482_T580_R0.5330.13
362_F653_P0.5330.13
584_T649_M0.5320.13
325_G332_G0.5310.13
439_T443_S0.5310.13
645_L658_Q0.5310.13
309_R439_T0.5300.13
222_F627_K0.5300.13
500_L613_L0.5300.13
175_D181_E0.5300.13
517_G661_Q0.5300.13
473_V484_E0.5290.13
615_N638_R0.5290.13
299_L324_I0.5280.13
481_T485_Q0.5270.13
156_E162_Q0.5260.13
425_I607_H0.5260.13
160_K185_Y0.5260.13
535_V606_P0.5250.13
299_L618_T0.5240.13
389_A651_I0.5240.13
480_D512_V0.5230.13
435_S446_D0.5220.13
483_F641_E0.5220.13
173_I187_N0.5220.13
155_S160_K0.5220.13
319_R447_A0.5210.13
325_G330_Y0.5210.13
400_A440_T0.5210.13
509_Q592_V0.5200.13
480_D518_Y0.5200.13
299_L304_T0.5190.13
626_Q649_M0.5180.13
522_Q579_R0.5170.13
617_L622_L0.5170.13
471_F657_H0.5170.13
161_E432_L0.5160.13
441_G458_V0.5140.13
271_D612_E0.5140.13
591_D640_A0.5130.13
393_S416_L0.5120.13
240_R418_V0.5110.13
414_G441_G0.5110.13
321_T433_L0.5090.13
321_T447_A0.5090.13
383_A412_T0.5090.13
481_T615_N0.5090.13
475_L655_T0.5090.13
321_T418_V0.5090.13
469_A485_Q0.5090.13
482_T592_V0.5090.13
509_Q613_L0.5080.13
406_V441_G0.5080.13
174_S196_Y0.5070.12
485_Q504_P0.5070.12
466_S627_K0.5070.12
518_Y643_K0.5050.12
160_K528_V0.5050.12
610_R616_D0.5050.12
550_S661_Q0.5050.12
536_V539_D0.5040.12
482_T591_D0.5040.12
138_H141_D0.5040.12
461_I473_V0.5030.12
508_P652_V0.5030.12
643_K654_S0.5020.12
333_A412_T0.5020.12
472_L528_V0.5020.12
592_V658_Q0.5020.12
548_V661_Q0.5010.12
316_I425_I0.5000.12
464_E485_Q0.5000.12
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
4gczA 2 0.5059 100 0.683 Contact Map
4i5sA 2 0.5504 100 0.695 Contact Map
3a0rA 2 0.4555 100 0.704 Contact Map
4r3aA 1 0.4362 100 0.743 Contact Map
4mpcA 2 0.4154 100 0.783 Contact Map
3jz3A 2 0.2181 100 0.786 Contact Map
2c2aA 2 0.316 100 0.786 Contact Map
4q20A 2 0.3101 100 0.787 Contact Map
4e01A 3 0.3872 100 0.79 Contact Map
2q8gA 2 0.4228 100 0.793 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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