COBQ - HALSA - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

COBQ - Probable cobyric acid synthase

UniProt:	Q9HPL5	Sequences: MTAGEDCRTILVAGTASHVGKSTVAAGLCRLLADRGLSVAPFKAQNMSNNARAVPVADGAPPAADPWGEIGVSQYVQARAARTAASTDHNPVLLKPRGDAESQLVVDGRAVGHYSAGSYYESHWADARDAAAAAHARLAADNDVVVAEGAGSIAELNLHDRDLANLETARFADATILLVVDIERGGAFASLHGTLALLPDDIRDRVAGAVITKFRGDRSLLDPGITEIEARTGVPVLGVIPHDDPGLPAEDSVSLPDPSERVVDGGQDGVPDAASVTVAVPHLPHISNFTDLAPLARTPGVRVAYQPLDAPLAAADAVVLPGTKNTVDDLRAAREAGLGRALRAFDGPIVGLCGGYQMLGDRITDAATESTADDLGAVDGVGVLPVETAFQPDKRVEAVTRELADCGALGGATGAVTGYEIHMGRTTVPDGVPQPVGPASAARGRVLGTYLHGLFGNDAARRGFRDAVFAAAGVEQPAPADTPDQSPSDAAAALVDAHVDLDPLGVPPAPDA	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	512 (467)
Sequences:	2235 (1463)
Seq/√Len:	67.7

HALSA - COBQ
SULSO - Q97TZ7

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
88_D	137_R	4.379	1.00
27_G	495_V	4.357	1.00
222_D	226_T	3.934	1.00
34_D	493_A	3.619	1.00
173_D	205_R	3.600	1.00
35_R	496_D	3.585	1.00
57_A	84_A	3.317	1.00
32_L	144_V	3.173	1.00
362_R	387_E	2.956	1.00
361_D	385_P	2.945	1.00
34_D	496_D	2.907	1.00
362_R	377_A	2.862	1.00
327_V	378_V	2.759	1.00
34_D	82_R	2.718	1.00
240_I	495_V	2.678	1.00
359_L	446_V	2.663	1.00
16_A	19_V	2.646	1.00
283_L	320_L	2.618	1.00
210_V	499_V	2.617	1.00
35_R	505_G	2.602	1.00
70_I	75_Y	2.562	1.00
170_R	201_D	2.540	1.00
170_R	205_R	2.484	1.00
364_T	377_A	2.483	1.00
277_T	304_A	2.438	1.00
219_S	222_D	2.426	1.00
180_V	187_A	2.372	1.00
334_R	339_G	2.355	1.00
156_L	227_E	2.310	1.00
33_A	82_R	2.260	1.00
277_T	302_R	2.256	1.00
317_A	464_F	2.252	1.00
107_D	134_A	2.248	1.00
298_T	461_R	2.226	1.00
196_A	231_R	2.152	1.00
24_V	240_I	2.150	1.00
192_H	231_R	2.144	1.00
385_P	429_P	2.120	1.00
364_T	387_E	2.116	1.00
386_V	426_T	2.069	1.00
159_H	199_P	2.051	1.00
170_R	202_I	2.043	1.00
318_V	342_L	2.019	1.00
12_V	179_V	2.018	1.00
159_H	202_I	2.014	1.00
76_V	247_L	1.973	1.00
117_G	219_S	1.962	1.00
200_D	204_D	1.937	1.00
294_P	456_G	1.934	1.00
84_A	398_A	1.931	1.00
76_V	488_S	1.924	1.00
38_S	142_N	1.901	1.00
226_T	230_A	1.896	1.00
284_P	332_A	1.894	1.00
13_A	176_I	1.892	1.00
279_A	306_Q	1.889	1.00
13_A	166_L	1.860	1.00
130_A	133_A	1.858	1.00
364_T	389_A	1.856	1.00
277_T	315_A	1.848	1.00
135_H	139_A	1.842	1.00
399_V	451_L	1.826	1.00
333_A	342_L	1.820	1.00
52_R	75_Y	1.819	1.00
227_E	231_R	1.817	1.00
279_A	315_A	1.801	1.00
350_V	455_F	1.791	1.00
180_V	191_L	1.761	1.00
28_L	32_L	1.760	1.00
191_L	209_A	1.748	1.00
416_V	451_L	1.685	0.99
192_H	196_A	1.680	0.99
177_L	237_L	1.679	0.99
168_T	172_A	1.675	0.99
350_V	447_L	1.646	0.99
339_G	381_V	1.640	0.99
147_A	168_T	1.640	0.99
31_L	495_V	1.637	0.99
10_I	146_V	1.620	0.99
53_A	396_V	1.608	0.99
29_C	146_V	1.603	0.99
503_P	506_V	1.595	0.99
282_H	307_P	1.580	0.99
94_L	104_L	1.570	0.99
79_R	488_S	1.568	0.99
280_V	303_V	1.557	0.99
318_V	345_F	1.556	0.99
26_A	488_S	1.556	0.99
27_G	31_L	1.551	0.99
336_A	339_G	1.523	0.99
367_A	392_P	1.523	0.99
458_D	461_R	1.520	0.99
221_L	225_I	1.519	0.99
136_A	139_A	1.515	0.99
240_I	498_H	1.514	0.99
58_D	86_S	1.510	0.99
68_G	87_T	1.510	0.99
227_E	230_A	1.500	0.99
37_L	144_V	1.498	0.99
114_Y	123_H	1.496	0.99
333_A	336_A	1.471	0.99
292_L	305_Y	1.470	0.99
370_S	376_G	1.467	0.99
88_D	141_D	1.461	0.98
361_D	429_P	1.458	0.98
76_V	248_P	1.452	0.98
500_D	503_P	1.451	0.98
226_T	229_E	1.450	0.98
391_Q	425_R	1.444	0.98
426_T	450_Y	1.439	0.98
12_V	28_L	1.439	0.98
107_D	133_A	1.435	0.98
356_Y	448_G	1.434	0.98
195_L	234_V	1.432	0.98
496_D	505_G	1.431	0.98
331_R	335_E	1.427	0.98
187_A	211_I	1.427	0.98
86_S	137_R	1.425	0.98
400_T	417_T	1.421	0.98
132_A	171_F	1.416	0.98
331_R	378_V	1.413	0.98
479_P	482_T	1.413	0.98
34_D	489_D	1.405	0.98
200_D	203_R	1.403	0.98
31_L	501_L	1.403	0.98
9_T	135_H	1.403	0.98
350_V	454_L	1.393	0.98
12_V	25_A	1.391	0.98
384_L	446_V	1.391	0.98
31_L	496_D	1.388	0.98
40_A	142_N	1.387	0.98
447_L	464_F	1.379	0.98
83_T	142_N	1.372	0.98
360_G	388_T	1.368	0.98
458_D	479_P	1.364	0.98
58_D	68_G	1.364	0.98
441_A	445_R	1.360	0.98
395_R	425_R	1.356	0.98
177_L	210_V	1.355	0.98
304_A	315_A	1.353	0.98
195_L	206_V	1.351	0.97
280_V	305_Y	1.337	0.97
400_T	415_A	1.337	0.97
220_L	223_P	1.337	0.97
12_V	210_V	1.333	0.97
86_S	141_D	1.330	0.97
437_G	440_S	1.321	0.97
361_D	387_E	1.315	0.97
356_Y	386_V	1.314	0.97
123_H	127_A	1.313	0.97
246_G	483_P	1.307	0.97
107_D	130_A	1.302	0.97
26_A	76_V	1.299	0.97
28_L	499_V	1.297	0.97
428_V	431_G	1.296	0.97
79_R	484_D	1.295	0.97
402_E	415_A	1.290	0.97
254_S	257_D	1.281	0.97
170_R	199_P	1.280	0.97
31_L	35_R	1.279	0.96
88_D	107_D	1.279	0.96
166_L	176_I	1.272	0.96
123_H	126_D	1.272	0.96
312_L	341_A	1.268	0.96
109_R	393_D	1.267	0.96
51_A	287_S	1.263	0.96
139_A	145_V	1.260	0.96
97_R	325_N	1.254	0.96
483_P	487_P	1.245	0.96
225_I	236_V	1.242	0.96
131_A	163_L	1.236	0.96
204_D	234_V	1.229	0.96
438_P	441_A	1.220	0.95
449_T	454_L	1.216	0.95
218_R	222_D	1.215	0.95
342_L	349_I	1.215	0.95
106_V	130_A	1.211	0.95
466_D	469_F	1.205	0.95
225_I	239_V	1.202	0.95
487_P	490_A	1.198	0.95
115_S	118_S	1.198	0.95
332_A	336_A	1.196	0.95
363_I	390_F	1.195	0.95
317_A	468_V	1.195	0.95
38_S	143_D	1.194	0.95
9_T	172_A	1.193	0.95
317_A	348_P	1.187	0.95
156_L	221_L	1.185	0.95
229_E	236_V	1.184	0.95
237_L	503_P	1.177	0.94
16_A	190_S	1.169	0.94
207_A	507_P	1.166	0.94
199_P	202_I	1.149	0.94
301_V	465_R	1.146	0.94
97_R	113_H	1.143	0.93
195_L	203_R	1.143	0.93
104_L	111_V	1.135	0.93
460_A	464_F	1.134	0.93
107_D	137_R	1.128	0.93
349_I	383_V	1.126	0.93
401_R	416_V	1.125	0.93
327_V	376_G	1.123	0.93
387_E	427_T	1.122	0.93
248_P	484_D	1.120	0.93
363_I	378_V	1.117	0.93
320_L	358_M	1.114	0.93
469_F	474_V	1.109	0.92
402_E	413_T	1.107	0.92
416_V	460_A	1.105	0.92
388_T	450_Y	1.105	0.92
88_D	134_A	1.103	0.92
329_D	358_M	1.101	0.92
330_L	334_R	1.092	0.92
334_R	378_V	1.086	0.92
280_V	292_L	1.085	0.92
327_V	363_I	1.085	0.92
12_V	19_V	1.084	0.92
98_G	101_E	1.081	0.91
196_A	203_R	1.078	0.91
128_R	171_F	1.075	0.91
350_V	464_F	1.074	0.91
281_P	338_L	1.072	0.91
97_R	101_E	1.065	0.91
79_R	481_D	1.061	0.91
396_V	421_I	1.061	0.91
203_R	234_V	1.058	0.91
373_D	376_G	1.051	0.90
283_L	333_A	1.047	0.90
195_L	209_A	1.045	0.90
277_T	314_A	1.044	0.90
100_A	115_S	1.042	0.90
118_S	121_E	1.040	0.90
99_D	285_H	1.038	0.90
495_V	499_V	1.034	0.90
191_L	228_I	1.033	0.89
292_L	352_L	1.033	0.89
156_L	231_R	1.029	0.89
111_V	123_H	1.029	0.89
325_N	328_D	1.028	0.89
501_L	505_G	1.027	0.89
87_T	107_D	1.025	0.89
281_P	320_L	1.023	0.89
40_A	83_T	1.020	0.89
370_S	373_D	1.015	0.89
24_V	495_V	1.014	0.89
106_V	127_A	1.012	0.88
44_A	92_V	1.011	0.88
330_L	363_I	1.008	0.88
330_L	378_V	1.006	0.88
13_A	153_I	1.002	0.88
277_T	313_A	1.002	0.88
128_R	167_E	0.999	0.88
330_L	358_M	0.997	0.88
403_L	460_A	0.993	0.88
209_A	236_V	0.991	0.87
281_P	306_Q	0.988	0.87
309_D	341_A	0.987	0.87
181_D	184_R	0.983	0.87
156_L	197_L	0.978	0.87
414_G	459_A	0.977	0.87
275_S	300_G	0.973	0.86
385_P	431_G	0.966	0.86
311_P	341_A	0.962	0.86
103_Q	324_K	0.960	0.86
132_A	136_A	0.959	0.86
318_V	347_G	0.955	0.85
177_L	504_L	0.954	0.85
136_A	171_F	0.954	0.85
308_L	311_P	0.954	0.85
385_P	439_A	0.953	0.85
178_L	206_V	0.952	0.85
292_L	303_V	0.948	0.85
128_R	132_A	0.948	0.85
428_V	433_P	0.947	0.85
235_P	503_P	0.947	0.85
398_A	417_T	0.943	0.85
188_F	224_G	0.938	0.84
92_V	163_L	0.933	0.84
110_A	423_M	0.928	0.84
114_Y	119_Y	0.926	0.84
385_P	428_V	0.925	0.84
306_Q	313_A	0.919	0.83
237_L	507_P	0.918	0.83
308_L	332_A	0.917	0.83
275_S	302_R	0.916	0.83
417_T	481_D	0.916	0.83
18_H	254_S	0.914	0.83
359_L	384_L	0.914	0.83
458_D	480_A	0.913	0.83
362_R	379_D	0.913	0.83
82_R	485_Q	0.912	0.83
23_T	26_A	0.910	0.83
326_T	363_I	0.908	0.82
222_D	239_V	0.896	0.82
316_D	472_A	0.895	0.81
120_Y	124_W	0.895	0.81
343_R	383_V	0.887	0.81
130_A	134_A	0.885	0.81
503_P	507_P	0.884	0.81
135_H	147_A	0.881	0.80
438_P	443_R	0.878	0.80
317_A	350_V	0.877	0.80
469_F	473_G	0.876	0.80
278_V	319_V	0.871	0.80
285_H	325_N	0.868	0.79
124_W	161_R	0.865	0.79
11_L	166_L	0.856	0.78
482_T	486_S	0.855	0.78
135_H	168_T	0.855	0.78
469_F	472_A	0.854	0.78
366_A	389_A	0.854	0.78
24_V	179_V	0.852	0.78
180_V	209_A	0.851	0.78
208_G	237_L	0.849	0.78
401_R	451_L	0.849	0.78
101_E	124_W	0.848	0.78
37_L	143_D	0.845	0.78
240_I	499_V	0.844	0.78
391_Q	395_R	0.844	0.78
188_F	197_L	0.841	0.77
32_L	37_L	0.841	0.77
25_A	28_L	0.840	0.77
389_A	427_T	0.838	0.77
306_Q	315_A	0.838	0.77
422_H	450_Y	0.835	0.77
438_P	442_A	0.831	0.76
494_L	498_H	0.831	0.76
159_H	167_E	0.830	0.76
334_R	379_D	0.826	0.76
342_L	381_V	0.826	0.76
192_H	195_L	0.825	0.76
279_A	304_A	0.824	0.76
367_A	389_A	0.821	0.76
283_L	323_T	0.821	0.76
210_V	240_I	0.821	0.76
40_A	138_L	0.820	0.75
12_V	177_L	0.815	0.75
348_P	445_R	0.812	0.75
25_A	146_V	0.811	0.75
371_T	390_F	0.810	0.75
187_A	191_L	0.806	0.74
153_I	166_L	0.805	0.74
172_A	205_R	0.804	0.74
132_A	172_A	0.803	0.74
129_D	133_A	0.802	0.74
87_T	137_R	0.799	0.74
323_T	390_F	0.799	0.74
51_A	290_T	0.798	0.73
372_A	375_L	0.796	0.73
388_T	426_T	0.792	0.73
315_A	342_L	0.792	0.73
481_D	485_Q	0.788	0.73
156_L	188_F	0.784	0.72
127_A	163_L	0.781	0.72
31_L	240_I	0.780	0.72
70_I	86_S	0.779	0.72
126_D	129_D	0.775	0.71
360_G	386_V	0.774	0.71
79_R	485_Q	0.774	0.71
248_P	488_S	0.772	0.71
209_A	234_V	0.771	0.71
119_Y	252_S	0.770	0.71
484_D	488_S	0.770	0.71
211_I	228_I	0.769	0.71
136_A	140_A	0.768	0.71
300_G	469_F	0.766	0.70
218_R	225_I	0.765	0.70
494_L	497_A	0.765	0.70
370_S	375_L	0.765	0.70
223_P	226_T	0.764	0.70
175_T	207_A	0.763	0.70
44_A	168_T	0.760	0.70
18_H	249_A	0.760	0.70
428_V	432_V	0.759	0.70
274_A	302_R	0.759	0.70
32_L	505_G	0.757	0.69
51_A	248_P	0.756	0.69
493_A	497_A	0.756	0.69
485_Q	489_D	0.753	0.69
16_A	228_I	0.753	0.69
134_A	137_R	0.752	0.69
353_C	394_K	0.750	0.69
97_R	100_A	0.749	0.69
192_H	232_T	0.749	0.69
367_A	391_Q	0.748	0.69
12_V	190_S	0.748	0.69
38_S	141_D	0.748	0.69
327_V	331_R	0.747	0.68
178_L	191_L	0.745	0.68
24_V	210_V	0.741	0.68
434_Q	437_G	0.736	0.67
153_I	194_T	0.735	0.67
138_L	145_V	0.734	0.67
154_A	221_L	0.734	0.67
39_V	143_D	0.732	0.67
243_D	494_L	0.730	0.67
338_L	342_L	0.728	0.66
22_S	71_G	0.726	0.66
501_L	504_L	0.723	0.66
56_V	59_G	0.723	0.66
135_H	145_V	0.722	0.66
44_A	131_A	0.722	0.66
298_T	458_D	0.721	0.66
35_R	502_D	0.716	0.65
343_R	379_D	0.716	0.65
296_A	305_Y	0.714	0.65
198_L	206_V	0.713	0.65
304_A	313_A	0.711	0.65
197_L	206_V	0.710	0.65
68_G	109_R	0.708	0.64
375_L	378_V	0.707	0.64
13_A	44_A	0.705	0.64
455_F	464_F	0.704	0.64
124_W	167_E	0.704	0.64
121_E	126_D	0.703	0.64
246_G	487_P	0.702	0.64
48_S	223_P	0.699	0.63
248_P	480_A	0.698	0.63
437_G	441_A	0.696	0.63
49_N	105_V	0.695	0.63
192_H	228_I	0.694	0.63
86_S	142_N	0.691	0.62
57_A	398_A	0.690	0.62
29_C	33_A	0.689	0.62
98_G	285_H	0.688	0.62
360_G	450_Y	0.686	0.62
33_A	83_T	0.685	0.62
35_R	504_L	0.685	0.62
309_D	338_L	0.684	0.62
403_L	412_A	0.684	0.62
417_T	457_N	0.683	0.62
284_P	323_T	0.683	0.62
240_I	494_L	0.680	0.61
154_A	198_L	0.677	0.61
124_W	163_L	0.676	0.61
197_L	223_P	0.675	0.61
382_G	385_P	0.673	0.60
345_F	349_I	0.673	0.60
191_L	211_I	0.672	0.60
128_R	131_A	0.671	0.60
276_V	465_R	0.670	0.60
298_T	460_A	0.669	0.60
28_L	504_L	0.669	0.60
281_P	312_L	0.665	0.59
44_A	164_A	0.663	0.59
75_Y	79_R	0.660	0.59
75_Y	85_A	0.659	0.59
255_L	289_F	0.659	0.59
133_A	137_R	0.659	0.59
339_G	343_R	0.658	0.59
211_I	225_I	0.657	0.59
132_A	163_L	0.657	0.59
292_L	319_V	0.657	0.59
127_A	131_A	0.655	0.58
156_L	187_A	0.655	0.58
98_G	124_W	0.655	0.58
218_R	239_V	0.654	0.58
29_C	81_A	0.654	0.58
348_P	467_A	0.652	0.58
97_R	110_A	0.650	0.58
386_V	446_V	0.648	0.57
34_D	505_G	0.645	0.57
327_V	375_L	0.645	0.57
326_T	390_F	0.644	0.57
207_A	210_V	0.644	0.57
10_I	252_S	0.644	0.57
319_V	352_L	0.643	0.57
309_D	332_A	0.643	0.57
334_R	363_I	0.642	0.57
341_A	344_A	0.642	0.57
166_L	202_I	0.641	0.57
209_A	232_T	0.640	0.57
126_D	130_A	0.639	0.56
248_P	293_A	0.638	0.56
340_R	343_R	0.636	0.56
222_D	225_I	0.636	0.56
188_F	225_I	0.635	0.56
211_I	221_L	0.634	0.56
495_V	498_H	0.634	0.56
191_L	237_L	0.634	0.56
73_S	147_A	0.633	0.56
367_A	371_T	0.633	0.56
170_R	173_D	0.633	0.56
312_L	338_L	0.631	0.55
430_D	433_P	0.630	0.55
429_P	432_V	0.630	0.55
377_A	387_E	0.630	0.55
15_T	190_S	0.629	0.55
52_R	70_I	0.628	0.55
201_D	204_D	0.628	0.55
229_E	235_P	0.625	0.55
183_E	215_R	0.623	0.55
466_D	474_V	0.623	0.55
385_P	441_A	0.622	0.54
79_R	248_P	0.622	0.54
98_G	325_N	0.622	0.54
70_I	85_A	0.619	0.54
386_V	448_G	0.617	0.54
137_R	140_A	0.616	0.54
35_R	501_L	0.614	0.53
137_R	141_D	0.614	0.53
187_A	224_G	0.613	0.53
125_A	129_D	0.613	0.53
192_H	197_L	0.612	0.53
167_E	175_T	0.611	0.53
111_V	130_A	0.610	0.53
357_Q	388_T	0.609	0.53
340_R	344_A	0.608	0.53
304_A	310_A	0.607	0.53
31_L	505_G	0.607	0.53
132_A	168_T	0.606	0.53
51_A	449_T	0.606	0.53
72_V	248_P	0.606	0.53
331_R	375_L	0.605	0.52
248_P	290_T	0.605	0.52
124_W	127_A	0.605	0.52
105_V	202_I	0.603	0.52
116_A	119_Y	0.603	0.52
241_P	498_H	0.603	0.52
298_T	465_R	0.602	0.52
466_D	472_A	0.602	0.52
462_R	469_F	0.601	0.52
9_T	174_A	0.600	0.52
298_T	462_R	0.600	0.52
154_A	189_A	0.600	0.52
497_A	501_L	0.598	0.52
101_E	115_S	0.597	0.51
104_L	114_Y	0.596	0.51
278_V	392_P	0.594	0.51
92_V	442_A	0.594	0.51
48_S	123_H	0.594	0.51
100_A	218_R	0.593	0.51
279_A	313_A	0.592	0.51
342_L	345_F	0.591	0.51
97_R	290_T	0.591	0.51
51_A	97_R	0.590	0.51
128_R	163_L	0.589	0.51
47_M	150_A	0.589	0.51
147_A	174_A	0.588	0.50
195_L	236_V	0.585	0.50
478_A	504_L	0.584	0.50
225_I	232_T	0.584	0.50
324_K	450_Y	0.583	0.50
281_P	342_L	0.582	0.50
97_R	318_V	0.581	0.50
34_D	485_Q	0.581	0.50
156_L	223_P	0.581	0.50
468_V	471_A	0.580	0.49
192_H	206_V	0.580	0.49
156_L	224_G	0.580	0.49
34_D	492_A	0.579	0.49
99_D	187_A	0.578	0.49
249_A	289_F	0.578	0.49
221_L	227_E	0.577	0.49
147_A	172_A	0.576	0.49
188_F	227_E	0.575	0.49
12_V	253_V	0.575	0.49
334_R	343_R	0.575	0.49
104_L	119_Y	0.575	0.49
101_E	113_H	0.575	0.49
332_A	341_A	0.575	0.49
107_D	135_H	0.574	0.49
228_I	236_V	0.574	0.49
40_A	141_D	0.574	0.49
286_I	305_Y	0.573	0.49
280_V	319_V	0.572	0.48
271_P	274_A	0.571	0.48
334_R	381_V	0.569	0.48
279_A	341_A	0.569	0.48
84_A	417_T	0.568	0.48
351_G	360_G	0.568	0.48
313_A	341_A	0.568	0.48
166_L	198_L	0.567	0.48
237_L	504_L	0.567	0.48
10_I	396_V	0.565	0.48
484_D	487_P	0.564	0.48
478_A	483_P	0.563	0.47
12_V	23_T	0.563	0.47
182_I	211_I	0.563	0.47
294_P	461_R	0.562	0.47
58_D	87_T	0.560	0.47
31_L	492_A	0.560	0.47
451_L	457_N	0.560	0.47
176_I	206_V	0.559	0.47
284_P	390_F	0.559	0.47
273_A	361_D	0.558	0.47
449_T	457_N	0.557	0.47
10_I	449_T	0.557	0.47
109_R	133_A	0.556	0.47
248_P	487_P	0.556	0.47
103_Q	423_M	0.554	0.46
18_H	257_D	0.554	0.46
279_A	309_D	0.554	0.46
393_D	425_R	0.554	0.46
23_T	245_P	0.553	0.46
32_L	507_P	0.553	0.46
94_L	119_Y	0.552	0.46
175_T	507_P	0.551	0.46
12_V	176_I	0.551	0.46
98_G	102_S	0.551	0.46
371_T	392_P	0.550	0.46
140_A	415_A	0.549	0.46
207_A	237_L	0.549	0.46
351_G	446_V	0.549	0.46
40_A	134_A	0.549	0.46
16_A	184_R	0.549	0.46
281_P	309_D	0.548	0.46
195_L	232_T	0.547	0.46
285_H	328_D	0.547	0.46
171_F	205_R	0.546	0.45
13_A	147_A	0.544	0.45
106_V	396_V	0.544	0.45
306_Q	345_F	0.542	0.45
343_R	381_V	0.542	0.45
127_A	192_H	0.542	0.45
284_P	363_I	0.541	0.45
468_V	472_A	0.540	0.45
88_D	138_L	0.539	0.45
309_D	313_A	0.538	0.44
286_I	289_F	0.538	0.44
94_L	102_S	0.537	0.44
18_H	253_V	0.536	0.44
325_N	373_D	0.536	0.44
31_L	498_H	0.536	0.44
103_Q	110_A	0.536	0.44
184_R	252_S	0.535	0.44
349_I	446_V	0.535	0.44
68_G	164_A	0.534	0.44
207_A	234_V	0.534	0.44
84_A	140_A	0.533	0.44
486_S	490_A	0.533	0.44
23_T	164_A	0.532	0.44
470_A	473_G	0.532	0.44
327_V	373_D	0.532	0.44
293_A	296_A	0.531	0.44
356_Y	371_T	0.530	0.44
324_K	388_T	0.530	0.44
12_V	154_A	0.529	0.43
76_V	484_D	0.529	0.43
201_D	205_R	0.529	0.43
356_Y	439_A	0.528	0.43
51_A	72_V	0.528	0.43
111_V	114_Y	0.527	0.43
135_H	174_A	0.527	0.43
15_T	280_V	0.527	0.43
159_H	170_R	0.526	0.43
312_L	318_V	0.526	0.43
102_S	116_A	0.524	0.43
221_L	316_D	0.524	0.43
363_I	380_G	0.523	0.43
428_V	439_A	0.523	0.43
211_I	239_V	0.522	0.43
328_D	373_D	0.522	0.43
28_L	210_V	0.521	0.42
131_A	134_A	0.521	0.42
49_N	290_T	0.520	0.42
154_A	285_H	0.520	0.42
252_S	282_H	0.519	0.42
48_S	221_L	0.519	0.42
33_A	485_Q	0.518	0.42
386_V	389_A	0.518	0.42
156_L	192_H	0.518	0.42
183_E	401_R	0.518	0.42
82_R	145_V	0.517	0.42
357_Q	450_Y	0.517	0.42
25_A	76_V	0.516	0.42
332_A	335_E	0.515	0.42
461_R	465_R	0.514	0.42
279_A	303_V	0.514	0.42
307_P	311_P	0.514	0.42
183_E	211_I	0.513	0.42
230_A	501_L	0.513	0.42
208_G	323_T	0.512	0.41
138_L	224_G	0.511	0.41
100_A	124_W	0.511	0.41
48_S	79_R	0.510	0.41
159_H	166_L	0.510	0.41
277_T	306_Q	0.509	0.41
456_G	480_A	0.509	0.41
178_L	209_A	0.508	0.41
146_V	505_G	0.508	0.41
502_D	505_G	0.508	0.41
297_R	480_A	0.506	0.41
83_T	89_H	0.506	0.41
276_V	301_V	0.506	0.41
113_H	120_Y	0.505	0.41
72_V	176_I	0.505	0.41
290_T	294_P	0.504	0.40
195_L	228_I	0.504	0.40
79_R	83_T	0.504	0.40
19_V	153_I	0.504	0.40
204_D	273_A	0.504	0.40
119_Y	123_H	0.503	0.40
295_L	350_V	0.503	0.40
236_V	239_V	0.503	0.40
11_L	153_I	0.502	0.40
221_L	226_T	0.502	0.40
204_D	335_E	0.502	0.40
157_N	182_I	0.501	0.40
32_L	146_V	0.500	0.40

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1s1mA	4	0.832	100	0.778	Contact Map
4zdjA	4	0.8184	100	0.78	Contact Map
3nvaA	2	0.8164	100	0.79	Contact Map
1vcoA	4	0.832	100	0.8	Contact Map
4a0gA	2	0.6914	100	0.862	Contact Map
3zq6A	2	0.4492	99.9	0.893	Contact Map
3ug7A	4	0.4727	99.9	0.894	Contact Map
3fgnA	2	0.4453	99.9	0.895	Contact Map
2issD	1	0.3379	99.9	0.896	Contact Map
2ywjA	1	0.3418	99.9	0.897	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0131 seconds.