Q9HPA9 - HALSA - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

Q9HPA9 - TRK potassium uptake system protein

UniProt:	Q9HPA9	Sequences: MSRANANRRRDLATIARDVGGLVLIAAGLMSASVLVAAGFQEWYAALGFLLAGGLSATVGGLARRRFADAPAPKMKHGMVIAAGGWFAIAVVGALPFLFTAWLTPPAAMARFVPTDATWTAVSVGNTTTLSSLAYFRQPLHALFESMSGWTGSGLTMAIHEPSLPRSIQWWRSLTQWVGGVGVVVLTVSILARPGSGSYALYRSEAREKKIHPSVVSTVRTVWKLVVGYTVVGVAVLFVAIRASDYGAALPVWDAAWQALNHTMTGLTTGGFSVTDNSIATYDAPVIEAALLPIMVAGAIAFPIHYRLLADRDHGVLRGDLQTRWLFVLLGGGVVVLAAQNVAAVPVTPDAVTQWTPAIGDVPVLSPAQADAARDATFQWVSALTCTGFQSAPIGNWIAGGKILVVGAMTIGGAAGSTVGGIKIIRAYTAVRGFIWQFSRVFLPSNAVVTARIDGRTLDRDAMEQEFSEAAIVALLWVVLLFATSLVLVNLAGPSFSYADALFEVASAQGNVGLSSGITGPDMSPIAEAMFLFNMWIGRLEIIPVLVFARAAISGLDP	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	558 (429)
Sequences:	2041 (1659)
Seq/√Len:	80.1

ECOLI - TRKG TRKH
BACSU - KTRB KTRD
HALSA - Q9HPA9 Q9HQ81 Q9HMF7

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
413_G	419_V	6.039	1.00
292_L	377_T	4.133	1.00
234_V	260_L	3.601	1.00
141_H	528_E	3.501	1.00
123_S	139_P	3.311	1.00
166_R	170_W	3.291	1.00
414_A	424_I	3.250	1.00
233_G	294_I	3.247	1.00
177_W	230_T	3.073	1.00
137_R	163_S	3.052	1.00
277_N	281_T	2.963	1.00
159_I	162_P	2.954	1.00
351_A	355_W	2.880	1.00
350_D	401_G	2.852	1.00
167_S	171_W	2.847	1.00
393_P	396_N	2.832	1.00
384_L	405_V	2.711	1.00
496_F	518_I	2.632	1.00
141_H	157_M	2.609	1.00
238_F	259_A	2.609	1.00
156_T	160_H	2.591	1.00
169_Q	257_W	2.532	1.00
288_E	375_D	2.488	1.00
137_R	164_L	2.484	1.00
349_P	404_L	2.462	1.00
273_S	276_D	2.382	1.00
489_V	492_A	2.301	1.00
343_A	346_P	2.296	1.00
406_V	506_A	2.233	1.00
296_V	381_V	2.209	1.00
487_V	530_M	2.208	1.00
500_D	516_S	2.175	1.00
492_A	527_A	2.171	1.00
484_T	534_N	2.159	1.00
147_M	532_L	2.153	1.00
380_W	384_L	2.134	1.00
251_P	255_A	2.116	1.00
327_F	330_L	2.112	1.00
237_L	291_L	2.108	1.00
485_S	502_L	2.100	1.00
145_E	157_M	2.099	1.00
112_F	536_W	2.069	1.00
350_D	405_V	2.064	1.00
339_A	343_A	2.055	1.00
336_V	339_A	2.052	1.00
333_G	339_A	2.030	1.00
127_T	139_P	2.007	1.00
148_S	272_F	2.001	1.00
330_L	333_G	1.996	1.00
138_Q	141_H	1.969	1.00
295_M	382_S	1.957	1.00
402_K	516_S	1.956	1.00
333_G	336_V	1.946	1.00
164_L	172_R	1.942	1.00
529_A	533_F	1.937	1.00
140_L	525_P	1.913	1.00
288_E	391_S	1.908	1.00
331_G	339_A	1.852	1.00
240_A	284_A	1.843	1.00
488_L	527_A	1.840	1.00
375_D	379_Q	1.823	1.00
283_D	371_D	1.819	1.00
266_G	389_F	1.794	1.00
368_A	371_D	1.793	1.00
488_L	492_A	1.783	1.00
338_A	428_Y	1.774	1.00
160_H	164_L	1.766	1.00
173_S	260_L	1.753	1.00
285_P	374_R	1.730	1.00
415_A	424_I	1.721	1.00
484_T	530_M	1.686	1.00
339_A	342_V	1.676	1.00
252_V	256_A	1.657	1.00
130_L	167_S	1.654	1.00
491_L	527_A	1.651	1.00
367_P	375_D	1.648	1.00
347_V	373_A	1.648	1.00
295_M	381_V	1.643	1.00
123_S	127_T	1.642	1.00
140_L	532_L	1.632	1.00
248_A	251_P	1.630	1.00
176_Q	270_G	1.627	1.00
523_M	531_F	1.627	1.00
527_A	531_F	1.622	1.00
394_I	405_V	1.620	1.00
280_A	390_Q	1.615	1.00
279_I	391_S	1.601	1.00
139_P	143_L	1.596	1.00
351_A	372_A	1.594	1.00
351_A	376_A	1.584	1.00
238_F	252_V	1.578	1.00
326_L	330_L	1.573	1.00
176_Q	265_T	1.548	0.99
256_A	260_L	1.546	0.99
238_F	256_A	1.545	0.99
140_L	528_E	1.544	0.99
229_Y	297_A	1.540	0.99
394_I	516_S	1.526	0.99
342_V	346_P	1.526	0.99
355_W	372_A	1.524	0.99
296_V	377_T	1.515	0.99
346_P	380_W	1.510	0.99
289_A	292_L	1.495	0.99
477_W	509_Q	1.491	0.99
430_A	474_A	1.483	0.99
422_I	427_A	1.476	0.99
295_M	387_T	1.473	0.99
149_G	272_F	1.471	0.99
275_T	281_T	1.468	0.99
248_A	255_A	1.458	0.99
336_V	340_Q	1.456	0.99
140_L	529_A	1.450	0.99
357_P	365_L	1.448	0.99
280_A	393_P	1.447	0.99
450_T	457_T	1.423	0.99
289_A	293_P	1.420	0.99
331_G	334_V	1.416	0.99
238_F	255_A	1.413	0.99
407_G	411_I	1.407	0.99
488_L	491_L	1.397	0.99
158_A	163_S	1.393	0.99
247_G	255_A	1.384	0.99
331_G	336_V	1.383	0.99
149_G	172_R	1.380	0.99
160_H	172_R	1.377	0.99
119_W	147_M	1.364	0.99
293_P	297_A	1.361	0.99
237_L	287_I	1.357	0.99
173_S	264_M	1.355	0.99
143_L	532_L	1.347	0.99
145_E	160_H	1.345	0.99
279_I	291_L	1.342	0.99
122_V	175_T	1.341	0.98
229_Y	305_H	1.330	0.98
341_N	345_V	1.328	0.98
325_W	330_L	1.305	0.98
369_Q	373_A	1.304	0.98
529_A	532_L	1.297	0.98
481_L	509_Q	1.295	0.98
241_I	246_Y	1.294	0.98
114_P	183_V	1.292	0.98
289_A	374_R	1.280	0.98
128_T	167_S	1.280	0.98
411_I	427_A	1.280	0.98
254_D	258_Q	1.277	0.98
497_S	500_D	1.273	0.98
286_V	290_A	1.272	0.98
343_A	381_V	1.272	0.98
173_S	176_Q	1.269	0.98
170_W	257_W	1.263	0.98
379_Q	391_S	1.260	0.98
220_R	224_K	1.260	0.98
236_V	286_V	1.250	0.98
233_G	290_A	1.249	0.98
234_V	256_A	1.246	0.98
292_L	381_V	1.241	0.98
492_A	524_S	1.237	0.97
336_V	343_A	1.221	0.97
288_E	292_L	1.218	0.97
343_A	347_V	1.209	0.97
218_T	417_S	1.208	0.97
370_A	374_R	1.202	0.97
435_I	439_S	1.201	0.97
338_A	342_V	1.189	0.97
395_G	516_S	1.187	0.97
131_S	136_F	1.186	0.97
137_R	165_P	1.186	0.97
326_L	329_L	1.183	0.97
398_I	401_G	1.177	0.97
386_C	512_V	1.174	0.96
334_V	342_V	1.172	0.96
157_M	160_H	1.165	0.96
262_H	273_S	1.159	0.96
157_M	528_E	1.157	0.96
166_R	169_Q	1.156	0.96
105_P	109_M	1.155	0.96
236_V	290_A	1.152	0.96
273_S	278_S	1.147	0.96
333_G	342_V	1.146	0.96
275_T	282_Y	1.145	0.96
138_Q	525_P	1.137	0.96
330_L	336_V	1.136	0.96
339_A	346_P	1.131	0.96
158_A	172_R	1.130	0.96
427_A	431_V	1.125	0.96
225_L	229_Y	1.125	0.96
496_F	501_A	1.125	0.96
379_Q	405_V	1.113	0.95
239_V	286_V	1.105	0.95
145_E	172_R	1.105	0.95
347_V	380_W	1.104	0.95
118_T	150_W	1.100	0.95
347_V	377_T	1.096	0.95
160_H	163_S	1.093	0.95
156_T	161_E	1.080	0.94
524_S	527_A	1.080	0.94
505_V	531_F	1.080	0.94
131_S	137_R	1.072	0.94
334_V	339_A	1.071	0.94
288_E	379_Q	1.069	0.94
364_V	376_A	1.066	0.94
402_K	500_D	1.064	0.94
415_A	425_I	1.058	0.94
518_I	522_D	1.056	0.94
505_V	534_N	1.055	0.94
325_W	328_V	1.053	0.94
292_L	296_V	1.051	0.94
296_V	343_A	1.045	0.93
226_V	268_T	1.045	0.93
324_R	327_F	1.043	0.93
403_I	498_Y	1.036	0.93
332_G	335_V	1.031	0.93
266_G	291_L	1.030	0.93
258_Q	262_H	1.028	0.93
173_S	257_W	1.026	0.93
328_V	331_G	1.022	0.93
228_G	231_V	1.017	0.92
351_A	369_Q	1.015	0.92
285_P	370_A	1.015	0.92
234_V	263_T	1.014	0.92
199_Y	203_R	1.010	0.92
404_L	486_L	1.007	0.92
347_V	376_A	1.006	0.92
431_V	435_I	1.001	0.92
303_P	416_G	0.991	0.91
331_G	335_V	0.985	0.91
137_R	172_R	0.984	0.91
279_I	382_S	0.983	0.91
127_T	136_F	0.982	0.91
375_D	391_S	0.973	0.91
116_D	536_W	0.970	0.91
134_A	165_P	0.970	0.91
296_V	339_A	0.969	0.90
269_T	385_T	0.965	0.90
432_R	453_I	0.962	0.90
265_T	389_F	0.961	0.90
285_P	288_E	0.958	0.90
506_A	510_G	0.958	0.90
127_T	142_A	0.958	0.90
343_A	377_T	0.956	0.90
397_W	401_G	0.955	0.90
284_A	287_I	0.950	0.90
333_G	338_A	0.949	0.90
123_S	143_L	0.944	0.89
340_Q	344_A	0.940	0.89
250_L	255_A	0.936	0.89
525_P	528_E	0.930	0.89
251_P	254_D	0.915	0.88
292_L	347_V	0.914	0.88
277_N	280_A	0.912	0.88
324_R	328_V	0.909	0.87
155_L	514_L	0.902	0.87
379_Q	384_L	0.895	0.87
223_W	227_V	0.888	0.86
200_A	216_V	0.887	0.86
406_V	499_A	0.883	0.86
351_A	354_Q	0.875	0.85
278_S	282_Y	0.874	0.85
333_G	337_L	0.873	0.85
358_A	365_L	0.872	0.85
224_K	228_G	0.868	0.85
231_V	260_L	0.866	0.85
460_R	464_E	0.865	0.85
299_A	387_T	0.860	0.84
480_L	534_N	0.858	0.84
332_G	336_V	0.858	0.84
379_Q	394_I	0.857	0.84
307_R	311_D	0.856	0.84
270_G	386_C	0.850	0.84
333_G	343_A	0.850	0.84
352_V	355_W	0.849	0.84
507_S	512_V	0.848	0.84
357_P	366_S	0.848	0.84
485_S	501_A	0.845	0.83
152_G	386_C	0.841	0.83
256_A	264_M	0.838	0.83
498_Y	502_L	0.837	0.83
132_S	165_P	0.836	0.83
441_V	452_R	0.833	0.82
359_I	396_N	0.831	0.82
113_V	117_A	0.830	0.82
295_M	380_W	0.829	0.82
176_Q	268_T	0.829	0.82
138_Q	142_A	0.825	0.82
325_W	329_L	0.821	0.82
394_I	397_W	0.817	0.81
255_A	259_A	0.816	0.81
399_A	499_A	0.815	0.81
282_Y	287_I	0.810	0.81
410_T	422_I	0.809	0.81
153_S	511_N	0.808	0.80
426_R	466_E	0.806	0.80
356_T	398_I	0.805	0.80
477_W	481_L	0.805	0.80
273_S	390_Q	0.804	0.80
263_T	293_P	0.801	0.80
297_A	305_H	0.799	0.80
406_V	502_L	0.797	0.80
333_G	346_P	0.795	0.79
503_F	515_S	0.792	0.79
285_P	289_A	0.790	0.79
292_L	391_S	0.787	0.79
257_W	392_A	0.787	0.79
151_T	420_G	0.786	0.79
224_K	543_I	0.784	0.78
249_A	282_Y	0.783	0.78
144_F	157_M	0.782	0.78
235_A	239_V	0.782	0.78
262_H	389_F	0.780	0.78
331_G	343_A	0.777	0.78
504_E	515_S	0.777	0.78
137_R	158_A	0.775	0.78
300_I	305_H	0.774	0.78
342_V	380_W	0.772	0.77
132_S	169_Q	0.771	0.77
345_V	349_P	0.770	0.77
349_P	353_T	0.768	0.77
407_G	482_F	0.768	0.77
262_H	275_T	0.767	0.77
502_L	506_A	0.761	0.76
524_S	531_F	0.759	0.76
241_I	287_I	0.758	0.76
119_W	150_W	0.756	0.76
355_W	365_L	0.756	0.76
358_A	366_S	0.755	0.76
151_T	268_T	0.754	0.76
203_R	206_A	0.752	0.76
166_R	257_W	0.751	0.75
330_L	339_A	0.750	0.75
151_T	226_V	0.748	0.75
338_A	431_V	0.747	0.75
329_L	333_G	0.744	0.75
214_S	217_S	0.744	0.75
228_G	232_V	0.741	0.74
496_F	522_D	0.738	0.74
143_L	529_A	0.738	0.74
170_W	173_S	0.735	0.74
393_P	517_G	0.734	0.74
273_S	277_N	0.733	0.74
437_Q	468_S	0.732	0.74
384_L	394_I	0.731	0.73
227_V	231_V	0.730	0.73
331_G	342_V	0.730	0.73
504_E	519_T	0.726	0.73
343_A	380_W	0.719	0.72
291_L	391_S	0.719	0.72
142_A	164_L	0.719	0.72
430_A	434_F	0.718	0.72
119_W	151_T	0.718	0.72
142_A	146_S	0.716	0.72
382_S	387_T	0.716	0.72
247_G	251_P	0.714	0.72
344_A	347_V	0.713	0.72
480_L	537_I	0.711	0.71
126_N	129_T	0.711	0.71
233_G	263_T	0.710	0.71
366_S	372_A	0.710	0.71
429_T	458_L	0.709	0.71
283_D	367_P	0.709	0.71
222_V	539_R	0.708	0.71
200_A	214_S	0.707	0.71
157_M	392_A	0.706	0.71
481_L	485_S	0.706	0.71
334_V	338_A	0.700	0.70
489_V	527_A	0.698	0.70
235_A	238_F	0.698	0.70
270_G	387_T	0.697	0.70
501_A	518_I	0.697	0.70
329_L	343_A	0.696	0.70
453_I	458_L	0.695	0.70
253_W	257_W	0.695	0.70
302_F	510_G	0.693	0.69
323_T	330_L	0.693	0.69
338_A	424_I	0.693	0.69
179_G	535_M	0.693	0.69
357_P	364_V	0.692	0.69
289_A	377_T	0.691	0.69
410_T	477_W	0.687	0.69
337_L	454_D	0.687	0.69
330_L	335_V	0.685	0.69
367_P	372_A	0.684	0.68
487_V	526_I	0.682	0.68
350_D	380_W	0.680	0.68
148_S	153_S	0.679	0.68
321_L	325_W	0.679	0.68
155_L	503_F	0.678	0.68
378_F	389_F	0.676	0.68
498_Y	501_A	0.675	0.67
327_F	333_G	0.674	0.67
216_V	220_R	0.673	0.67
155_L	508_A	0.671	0.67
200_A	203_R	0.670	0.67
158_A	164_L	0.670	0.67
247_G	252_V	0.670	0.67
159_I	276_D	0.670	0.67
152_G	269_T	0.668	0.67
248_A	259_A	0.667	0.66
198_S	203_R	0.667	0.66
382_S	514_L	0.664	0.66
226_V	267_L	0.662	0.66
373_A	376_A	0.662	0.66
316_V	332_G	0.661	0.66
155_L	519_T	0.659	0.66
486_L	490_N	0.658	0.65
327_F	343_A	0.656	0.65
258_Q	275_T	0.655	0.65
384_L	408_A	0.652	0.65
145_E	156_T	0.652	0.65
221_T	306_Y	0.650	0.64
106_P	109_M	0.650	0.64
377_T	381_V	0.649	0.64
509_Q	534_N	0.648	0.64
485_S	505_V	0.646	0.64
215_V	223_W	0.646	0.64
122_V	299_A	0.643	0.64
410_T	481_L	0.640	0.63
390_Q	514_L	0.640	0.63
177_W	226_V	0.638	0.63
234_V	259_A	0.637	0.63
226_V	230_T	0.637	0.63
224_K	231_V	0.636	0.63
288_E	374_R	0.632	0.62
359_I	365_L	0.630	0.62
279_I	387_T	0.630	0.62
422_I	474_A	0.629	0.62
122_V	126_N	0.628	0.62
156_T	172_R	0.628	0.62
518_I	531_F	0.627	0.62
235_A	293_P	0.626	0.62
341_N	344_A	0.626	0.62
349_P	352_V	0.625	0.61
272_F	416_G	0.625	0.61
156_T	231_V	0.625	0.61
400_G	486_L	0.625	0.61
419_V	477_W	0.624	0.61
156_T	390_Q	0.623	0.61
328_V	333_G	0.622	0.61
124_V	341_N	0.621	0.61
238_F	248_A	0.621	0.61
269_T	387_T	0.621	0.61
116_D	120_T	0.620	0.61
542_I	546_L	0.618	0.61
386_C	391_S	0.616	0.60
177_W	268_T	0.616	0.60
262_H	274_V	0.616	0.60
494_P	497_S	0.615	0.60
481_L	506_A	0.615	0.60
384_L	514_L	0.615	0.60
295_M	386_C	0.613	0.60
122_V	179_G	0.612	0.60
157_M	548_F	0.611	0.60
237_L	241_I	0.610	0.60
460_R	463_M	0.610	0.60
329_L	336_V	0.608	0.59
117_A	121_A	0.606	0.59
140_L	315_G	0.606	0.59
317_L	332_G	0.605	0.59
141_H	163_S	0.605	0.59
433_G	467_F	0.604	0.59
201_L	206_A	0.604	0.59
155_L	515_S	0.603	0.59
327_F	331_G	0.603	0.59
496_F	500_D	0.602	0.59
482_F	486_L	0.601	0.58
409_M	517_G	0.600	0.58
386_C	511_N	0.599	0.58
149_G	261_N	0.599	0.58
126_N	171_W	0.598	0.58
247_G	259_A	0.597	0.58
370_A	373_A	0.597	0.58
468_S	543_I	0.597	0.58
392_A	397_W	0.595	0.58
433_G	463_M	0.594	0.58
414_A	419_V	0.593	0.57
300_I	308_L	0.593	0.57
152_G	387_T	0.592	0.57
386_C	424_I	0.592	0.57
328_V	332_G	0.590	0.57
195_G	222_V	0.590	0.57
157_M	163_S	0.589	0.57
437_Q	464_E	0.589	0.57
181_V	226_V	0.588	0.57
248_A	252_V	0.588	0.57
331_G	338_A	0.587	0.57
403_I	482_F	0.586	0.57
231_V	234_V	0.585	0.56
249_A	255_A	0.585	0.56
156_T	163_S	0.585	0.56
170_W	174_L	0.585	0.56
336_V	342_V	0.584	0.56
338_A	341_N	0.584	0.56
412_G	421_G	0.583	0.56
235_A	263_T	0.583	0.56
474_A	478_V	0.583	0.56
546_L	550_R	0.582	0.56
123_S	142_A	0.582	0.56
117_A	474_A	0.582	0.56
113_V	429_T	0.581	0.56
452_R	455_G	0.580	0.56
168_I	541_E	0.578	0.56
131_S	163_S	0.577	0.55
330_L	343_A	0.576	0.55
515_S	554_S	0.576	0.55
504_E	508_A	0.575	0.55
176_Q	389_F	0.573	0.55
261_N	265_T	0.573	0.55
115_T	151_T	0.573	0.55
225_L	305_H	0.571	0.55
355_W	369_Q	0.571	0.55
503_F	507_S	0.571	0.55
429_T	432_R	0.570	0.55
354_Q	401_G	0.569	0.54
266_G	451_A	0.566	0.54
429_T	462_A	0.565	0.54
519_T	523_M	0.565	0.54
173_S	265_T	0.564	0.54
322_Q	330_L	0.564	0.54
173_S	230_T	0.563	0.54
344_A	489_V	0.563	0.54
237_L	272_F	0.562	0.53
340_Q	343_A	0.562	0.53
411_I	535_M	0.562	0.53
518_I	527_A	0.562	0.53
201_L	205_E	0.562	0.53
463_M	466_E	0.561	0.53
308_L	312_R	0.560	0.53
183_V	401_G	0.560	0.53
338_A	343_A	0.560	0.53
152_G	295_M	0.559	0.53
334_V	341_N	0.559	0.53
283_D	375_D	0.556	0.53
153_S	535_M	0.556	0.53
475_L	478_V	0.556	0.53
150_W	539_R	0.554	0.52
481_L	505_V	0.554	0.52
200_A	450_T	0.554	0.52
429_T	551_A	0.554	0.52
155_L	504_E	0.552	0.52
387_T	511_N	0.552	0.52
130_L	162_P	0.552	0.52
434_F	464_E	0.551	0.52
257_W	419_V	0.550	0.52
500_D	518_I	0.550	0.52
330_L	334_V	0.550	0.52
256_A	259_A	0.549	0.52
382_S	386_C	0.548	0.52
312_R	317_L	0.548	0.52
508_A	531_F	0.547	0.52
434_F	550_R	0.547	0.52
137_R	141_H	0.547	0.52
217_S	220_R	0.546	0.51
335_V	414_A	0.546	0.51
474_A	479_V	0.546	0.51
262_H	272_F	0.545	0.51
335_V	339_A	0.545	0.51
386_C	423_K	0.544	0.51
205_E	208_E	0.544	0.51
328_V	336_V	0.544	0.51
163_S	166_R	0.543	0.51
526_I	530_M	0.542	0.51
177_W	264_M	0.542	0.51
474_A	477_W	0.541	0.51
121_A	125_G	0.541	0.51
518_I	523_M	0.541	0.51
112_F	540_L	0.540	0.51
465_Q	543_I	0.540	0.51
492_A	531_F	0.539	0.51
241_I	257_W	0.538	0.50
152_G	380_W	0.537	0.50
485_S	506_A	0.537	0.50
264_M	290_A	0.536	0.50
116_D	121_A	0.536	0.50
240_A	246_Y	0.535	0.50
238_F	247_G	0.534	0.50
138_Q	163_S	0.533	0.50
305_H	309_L	0.532	0.50
215_V	407_G	0.532	0.50
199_Y	202_Y	0.532	0.50
432_R	451_A	0.531	0.49
108_A	151_T	0.530	0.49
118_T	178_V	0.530	0.49
173_S	261_N	0.528	0.49
477_W	534_N	0.527	0.49
297_A	300_I	0.527	0.49
231_V	345_V	0.527	0.49
112_F	548_F	0.526	0.49
176_Q	264_M	0.526	0.49
353_T	490_N	0.526	0.49
337_L	341_N	0.525	0.49
170_W	217_S	0.524	0.49
494_P	524_S	0.524	0.49
122_V	270_G	0.523	0.48
297_A	308_L	0.523	0.48
298_G	301_A	0.523	0.48
307_R	433_G	0.522	0.48
379_Q	392_A	0.521	0.48
151_T	343_A	0.521	0.48
225_L	228_G	0.521	0.48
240_A	286_V	0.520	0.48
412_G	420_G	0.519	0.48
253_W	548_F	0.518	0.48
303_P	428_Y	0.517	0.48
109_M	112_F	0.517	0.48
528_E	532_L	0.516	0.48
111_R	434_F	0.515	0.47
389_F	418_T	0.515	0.47
170_W	239_V	0.515	0.47
152_G	385_T	0.514	0.47
386_C	389_F	0.513	0.47
133_L	136_F	0.510	0.47
411_I	510_G	0.510	0.47
190_I	476_L	0.509	0.47
324_R	330_L	0.509	0.47
278_S	390_Q	0.509	0.47
276_D	281_T	0.509	0.47
409_M	508_A	0.509	0.47
400_G	459_D	0.508	0.47
475_L	479_V	0.508	0.47
238_F	251_P	0.508	0.47
236_V	247_G	0.507	0.46
278_S	512_V	0.507	0.46
166_R	183_V	0.507	0.46
369_Q	380_W	0.507	0.46
302_F	417_S	0.506	0.46
209_K	416_G	0.506	0.46
189_S	215_V	0.506	0.46
134_A	193_R	0.505	0.46
138_Q	528_E	0.505	0.46
278_S	387_T	0.505	0.46
180_G	412_G	0.505	0.46
494_P	527_A	0.505	0.46
213_P	496_F	0.504	0.46
159_I	390_Q	0.504	0.46
212_H	549_A	0.504	0.46
278_S	307_R	0.503	0.46
522_D	526_I	0.503	0.46
246_Y	250_L	0.503	0.46
113_V	533_F	0.503	0.46
170_W	296_V	0.503	0.46
474_A	480_L	0.502	0.46
357_P	398_I	0.501	0.46
350_D	379_Q	0.501	0.46
480_L	484_T	0.500	0.45
379_Q	382_S	0.500	0.45

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4j7cI	2	0.7455	100	0.334	Contact Map
3pjzA	2	0.8262	100	0.341	Contact Map
3ukmA	2	0.362	97.5	0.941	Contact Map
4twkA	2	0.3853	95.9	0.953	Contact Map
4wfeA	2	0.362	95.6	0.954	Contact Map
4bw5A	2	0.3638	95.5	0.954	Contact Map
2a9hA	4	0.1738	77.4	0.968	Contact Map
2ih3C	4	0.1738	77	0.968	Contact Map
1lnqA	6	0.1398	74.6	0.968	Contact Map
3effK	4	0.1649	70.7	0.969	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.012 seconds.