Q9HPA2 - HALSA - GREMLIN Contacts

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Q9HPA2 - Htr17 transducer

UniProt:	Q9HPA2	Sequences: MNHLIVLFDVIAVAAYVAAIGVGIQTYRDTTDIAGFWVNYTYICGLGFLWTGVVALEWIGVAGPVMDAFSTSLLAVLIGVVAISSTGTISIVEDLKTSNARAHRRRKDAEQAKRRADEQRAQAQEAKAEAQDAREEAETLAAKLQERAAERDAQLSKKASEYSSVMEKAASGDLTVRANSSSDSDAMTEVGQAFNEMIAAFEEMVARTREFAGDVADNSRDIHASVDEIEAASEQVAESVQEISAGTDREHTRLADATDELQSLSGAVEEVAASASQVADVSDQAADRGRQGSDDAAAAVTQMTDIQSETEAVVSEANALAAEAQEIRRVVDLINDITDQTHLLALNASIEAARADQDGDGFAVVAAEVKELAEETNEATDEIETLVDNLLSSTQSVVDDSEQMAATVSSGTETVENALTALEEIGDHVTDVNEAVQQIDDATDAQAASADTTVSMIEEIEDISEQNSSEAASVSAAAQQQTASLSDVTDGVTRLVDRADTLQDVLTGFTVDSDDYELDVDTSRPATTNPELEADD	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	536 (449)
Sequences:	15978 (13353)
Seq/√Len:	630.2

ECOLI - MCP2 MCP4 MCP3 AER MCP1
BACSU - YVAQ YOAH TLPA MCPB TLPB MCPA MCPC TLPC HEMAT YFMS
HALSA - Q9HPA2 HTR7 Q9HS86 Q9HQX8 HTR4 HTR9 HMAT HTR2 Q9HRA1 Q9HP10 COST Q9HRN6 Q9HR88 Q9HPQ5 HTR1 Q9HQT5 Q9HPW6

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
168_K	173_D	3.177	1.00
182_S	188_T	3.001	1.00
88_T	91_I	2.984	1.00
168_K	176_V	2.542	1.00
195_N	198_I	2.353	1.00
246_G	463_I	2.284	1.00
51_T	67_D	2.275	1.00
177_R	202_E	2.218	1.00
163_S	189_E	2.192	1.00
323_E	389_N	2.167	1.00
162_Y	191_G	2.160	1.00
167_E	189_E	2.156	1.00
153_A	157_K	2.153	1.00
132_D	136_E	2.140	1.00
294_D	298_A	2.061	1.00
152_D	156_S	2.059	1.00
163_S	193_A	2.050	1.00
167_E	196_E	2.039	1.00
288_R	424_E	2.027	1.00
322_A	325_Q	2.015	1.00
185_D	188_T	1.993	1.00
326_E	329_R	1.963	1.00
167_E	171_S	1.962	1.00
41_T	45_G	1.928	1.00
110_E	114_R	1.919	1.00
166_M	197_M	1.916	1.00
305_D	407_T	1.915	1.00
323_E	393_S	1.899	1.00
319_A	393_S	1.891	1.00
332_D	336_D	1.886	1.00
195_N	199_A	1.863	1.00
287_D	291_Q	1.856	1.00
413_E	417_N	1.831	1.00
300_V	419_L	1.825	1.00
148_A	152_D	1.804	1.00
169_A	198_I	1.800	1.00
306_I	411_G	1.797	1.00
64_P	68_A	1.793	1.00
177_R	199_A	1.786	1.00
34_A	38_V	1.780	1.00
270_E	273_A	1.772	1.00
166_M	194_F	1.771	1.00
301_T	305_D	1.766	1.00
169_A	197_M	1.762	1.00
203_E	207_R	1.717	1.00
420_T	423_E	1.700	1.00
459_E	462_D	1.695	1.00
79_G	82_A	1.689	1.00
409_S	413_E	1.689	1.00
82_A	86_T	1.680	1.00
61_V	65_V	1.680	1.00
135_E	139_T	1.678	1.00
127_K	131_Q	1.678	1.00
177_R	198_I	1.676	1.00
65_V	69_F	1.674	1.00
45_G	49_L	1.673	1.00
431_D	434_E	1.666	1.00
202_E	206_A	1.659	1.00
60_G	64_P	1.636	1.00
44_C	48_F	1.635	1.00
177_R	195_N	1.623	1.00
284_Q	287_D	1.615	1.00
416_E	420_T	1.613	1.00
291_Q	294_D	1.609	1.00
48_F	52_G	1.606	1.00
129_E	133_A	1.602	1.00
78_I	82_A	1.600	1.00
71_T	75_A	1.598	1.00
58_W	61_V	1.598	1.00
189_E	192_Q	1.595	1.00
406_A	410_S	1.591	1.00
166_M	193_A	1.585	1.00
297_A	301_T	1.583	1.00
167_E	193_A	1.568	1.00
121_A	125_E	1.561	1.00
277_Q	280_D	1.557	1.00
298_A	301_T	1.548	1.00
329_R	332_D	1.547	1.00
33_I	85_S	1.544	1.00
486_S	490_D	1.543	1.00
317_A	397_V	1.536	1.00
420_T	424_E	1.533	1.00
136_E	140_L	1.526	1.00
109_A	112_A	1.522	1.00
480_Q	483_A	1.520	1.00
110_E	113_K	1.518	1.00
304_T	416_E	1.518	1.00
376_T	380_T	1.512	1.00
33_I	37_W	1.511	1.00
384_E	388_D	1.509	1.00
321_A	398_V	1.501	1.00
280_D	283_D	1.501	1.00
278_V	436_V	1.500	1.00
37_W	41_T	1.498	1.00
42_Y	45_G	1.492	1.00
131_Q	135_E	1.485	1.00
280_D	284_Q	1.481	1.00
253_R	459_E	1.475	1.00
316_E	396_S	1.468	1.00
162_Y	190_V	1.468	1.00
231_A	235_Q	1.463	1.00
378_E	382_E	1.456	1.00
487_D	490_D	1.455	1.00
452_T	455_S	1.453	1.00
316_E	397_V	1.451	1.00
430_T	434_E	1.444	1.00
64_P	67_D	1.437	1.00
107_K	111_Q	1.433	1.00
417_N	420_T	1.431	1.00
298_A	414_T	1.429	1.00
326_E	382_E	1.426	1.00
323_E	326_E	1.422	1.00
424_E	427_D	1.420	1.00
290_R	294_D	1.417	1.00
97_T	100_A	1.415	1.00
444_D	448_A	1.415	1.00
410_S	413_E	1.412	1.00
48_F	51_T	1.407	1.00
40_Y	44_C	1.407	1.00
262_Q	266_G	1.389	1.00
298_A	417_N	1.379	1.00
371_E	374_E	1.374	1.00
162_Y	194_F	1.369	1.00
318_N	322_A	1.364	1.00
295_D	417_N	1.357	1.00
451_D	455_S	1.352	1.00
242_E	245_A	1.351	1.00
483_A	487_D	1.348	1.00
160_S	163_S	1.348	1.00
199_A	203_E	1.346	1.00
163_S	167_E	1.339	1.00
117_D	121_A	1.335	1.00
57_E	60_G	1.326	1.00
328_R	391_L	1.324	1.00
111_Q	114_R	1.323	1.00
68_A	72_S	1.322	1.00
374_E	378_E	1.321	1.00
180_S	195_N	1.318	1.00
423_E	427_D	1.317	1.00
311_E	315_S	1.312	1.00
319_A	322_A	1.310	1.00
75_A	79_G	1.306	1.00
289_G	426_G	1.306	1.00
56_L	59_I	1.297	1.00
65_V	68_A	1.296	1.00
173_D	176_V	1.293	1.00
367_A	370_K	1.292	1.00
57_E	61_V	1.278	1.00
308_S	312_A	1.277	1.00
290_R	430_T	1.274	1.00
161_E	179_N	1.274	1.00
479_Q	483_A	1.274	1.00
335_N	384_E	1.274	1.00
128_A	132_D	1.272	1.00
82_A	85_S	1.272	1.00
322_A	326_E	1.270	1.00
427_D	431_D	1.268	1.00
128_A	131_Q	1.268	1.00
252_T	255_A	1.268	1.00
229_I	233_S	1.260	1.00
301_T	304_T	1.256	1.00
349_S	370_K	1.256	1.00
283_D	287_D	1.255	1.00
271_V	443_T	1.247	1.00
111_Q	115_R	1.243	1.00
349_S	367_A	1.243	1.00
166_M	190_V	1.237	1.00
164_S	167_E	1.222	1.00
34_A	37_W	1.218	1.00
476_A	480_Q	1.217	1.00
83_I	88_T	1.216	1.00
276_S	280_D	1.215	1.00
238_E	242_E	1.214	1.00
47_G	51_T	1.208	1.00
69_F	72_S	1.206	1.00
67_D	71_T	1.205	1.00
302_Q	410_S	1.205	1.00
256_D	259_D	1.200	1.00
38_V	42_Y	1.196	1.00
293_S	423_E	1.183	1.00
381_D	385_T	1.181	1.00
269_E	273_A	1.178	1.00
76_V	79_G	1.176	1.00
132_D	135_E	1.175	1.00
50_W	59_I	1.174	1.00
124_Q	128_A	1.169	1.00
49_L	52_G	1.169	1.00
112_A	115_R	1.168	1.00
286_A	290_R	1.167	1.00
206_A	210_E	1.165	1.00
473_S	476_A	1.164	1.00
273_A	277_Q	1.164	1.00
149_A	153_A	1.154	1.00
406_A	409_S	1.152	1.00
310_T	408_V	1.150	1.00
118_E	122_Q	1.150	1.00
287_D	290_R	1.149	1.00
120_R	124_Q	1.148	1.00
469_S	473_S	1.147	1.00
32_D	35_G	1.146	1.00
312_A	315_S	1.145	1.00
462_D	466_Q	1.143	1.00
292_G	425_I	1.138	1.00
198_I	202_E	1.138	1.00
40_Y	78_I	1.135	1.00
299_A	415_V	1.134	1.00
90_S	94_D	1.133	1.00
200_A	203_E	1.133	1.00
308_S	311_E	1.133	1.00
469_S	472_A	1.133	1.00
299_A	418_A	1.132	1.00
378_E	381_D	1.124	1.00
122_Q	126_A	1.123	1.00
458_E	462_D	1.120	1.00
168_K	171_S	1.120	1.00
62_A	65_V	1.119	1.00
208_T	211_F	1.108	1.00
180_S	191_G	1.108	1.00
241_Q	245_A	1.105	1.00
44_C	74_L	1.100	1.00
462_D	465_E	1.098	1.00
281_V	431_D	1.097	1.00
249_R	252_T	1.095	1.00
239_S	470_E	1.094	1.00
119_Q	122_Q	1.093	1.00
207_R	210_E	1.093	1.00
248_D	252_T	1.093	1.00
38_V	41_T	1.090	1.00
96_K	100_A	1.089	1.00
165_V	178_A	1.088	1.00
333_L	379_A	1.087	1.00
180_S	192_Q	1.086	1.00
381_D	384_E	1.086	1.00
441_D	445_A	1.083	1.00
317_A	398_V	1.082	1.00
252_T	256_D	1.081	1.00
293_S	297_A	1.081	1.00
245_A	249_R	1.079	1.00
178_A	195_N	1.077	1.00
171_S	196_E	1.077	1.00
133_A	136_E	1.076	1.00
108_D	111_Q	1.075	1.00
45_G	48_F	1.074	1.00
276_S	444_D	1.068	1.00
388_D	392_S	1.066	1.00
116_A	120_R	1.065	1.00
109_A	114_R	1.063	1.00
31_T	34_A	1.061	1.00
291_Q	424_E	1.056	1.00
123_A	127_K	1.055	1.00
466_Q	469_S	1.045	1.00
154_Q	158_K	1.044	1.00
291_Q	417_N	1.044	1.00
43_I	47_G	1.042	1.00
441_D	444_D	1.042	1.00
74_L	78_I	1.039	1.00
73_L	77_L	1.038	1.00
324_A	394_T	1.038	1.00
77_L	81_V	1.037	1.00
90_S	93_E	1.036	1.00
385_T	389_N	1.033	1.00
293_S	426_G	1.033	1.00
182_S	185_D	1.030	1.00
162_Y	166_M	1.020	1.00
160_S	164_S	1.018	1.00
191_G	195_N	1.017	1.00
116_A	119_Q	1.011	1.00
245_A	248_D	1.011	1.00
269_E	451_D	1.011	1.00
294_D	297_A	1.010	1.00
70_S	74_L	1.010	1.00
161_E	164_S	1.010	1.00
108_D	112_A	1.009	1.00
43_I	46_L	1.008	1.00
263_S	266_G	1.007	1.00
100_A	104_R	1.006	1.00
307_Q	412_T	1.005	1.00
326_E	389_N	1.004	1.00
192_Q	195_N	1.001	1.00
273_A	276_S	1.001	1.00
292_G	422_L	1.000	1.00
159_A	187_M	1.000	1.00
490_D	493_T	0.999	1.00
264_L	450_A	0.998	1.00
95_L	98_S	0.997	1.00
75_A	78_I	0.995	1.00
227_D	231_A	0.995	1.00
89_I	93_E	0.994	1.00
455_S	459_E	0.993	1.00
309_E	407_T	0.993	1.00
465_E	469_S	0.991	1.00
164_S	168_K	0.985	1.00
315_S	319_A	0.985	1.00
227_D	489_T	0.980	1.00
321_A	395_Q	0.979	1.00
72_S	75_A	0.979	1.00
335_N	380_T	0.979	1.00
304_T	308_S	0.977	1.00
235_Q	238_E	0.972	1.00
204_M	208_T	0.971	1.00
178_A	191_G	0.970	1.00
259_D	263_S	0.968	1.00
174_L	201_F	0.968	1.00
413_E	416_E	0.967	1.00
35_G	38_V	0.961	1.00
315_S	318_N	0.961	1.00
58_W	62_A	0.958	1.00
81_V	85_S	0.956	1.00
79_G	83_I	0.953	1.00
249_R	253_R	0.948	1.00
382_E	385_T	0.947	1.00
489_T	493_T	0.946	1.00
165_V	168_K	0.946	1.00
179_N	195_N	0.943	1.00
205_V	208_T	0.939	1.00
176_V	198_I	0.938	1.00
47_G	50_W	0.938	1.00
150_E	153_A	0.937	1.00
61_V	64_P	0.935	1.00
159_A	190_V	0.934	1.00
254_L	460_I	0.933	1.00
155_L	158_K	0.929	1.00
107_K	110_E	0.929	1.00
395_Q	399_D	0.928	1.00
472_A	476_A	0.927	1.00
121_A	124_Q	0.923	1.00
375_E	378_E	0.922	1.00
44_C	47_G	0.919	1.00
196_E	199_A	0.919	1.00
157_K	161_E	0.917	1.00
68_A	71_T	0.913	1.00
316_E	400_D	0.912	1.00
165_V	176_V	0.912	1.00
163_S	190_V	0.906	1.00
46_L	49_L	0.902	1.00
257_A	453_T	0.900	1.00
109_A	113_K	0.892	1.00
187_M	191_G	0.890	1.00
325_Q	395_Q	0.886	1.00
434_E	438_Q	0.880	1.00
296_A	418_A	0.880	1.00
414_T	417_N	0.877	1.00
124_Q	127_K	0.876	1.00
165_V	194_F	0.875	1.00
59_I	62_A	0.874	1.00
196_E	200_A	0.874	1.00
184_S	188_T	0.873	1.00
377_N	381_D	0.873	1.00
37_W	40_Y	0.873	1.00
117_D	120_R	0.873	1.00
330_V	386_L	0.873	1.00
51_T	64_P	0.871	1.00
194_F	197_M	0.868	1.00
158_K	187_M	0.864	1.00
169_A	194_F	0.860	1.00
234_E	238_E	0.860	1.00
39_N	42_Y	0.859	1.00
407_T	410_S	0.858	1.00
285_A	429_V	0.857	1.00
288_R	428_H	0.857	1.00
207_R	487_D	0.855	1.00
35_G	39_N	0.852	1.00
180_S	188_T	0.851	1.00
286_A	430_T	0.851	1.00
114_R	118_E	0.847	1.00
203_E	206_A	0.845	1.00
244_S	248_D	0.844	1.00
274_S	438_Q	0.842	1.00
129_E	132_D	0.841	1.00
303_M	411_G	0.841	1.00
42_Y	46_L	0.839	1.00
230_E	234_E	0.839	1.00
437_Q	441_D	0.838	1.00
161_E	165_V	0.836	1.00
40_Y	77_L	0.835	1.00
455_S	458_E	0.833	1.00
335_N	339_D	0.828	1.00
264_L	446_Q	0.828	1.00
306_I	408_V	0.825	1.00
311_E	405_A	0.825	1.00
385_T	388_D	0.825	1.00
230_E	233_S	0.823	1.00
139_T	143_K	0.818	1.00
325_Q	329_R	0.814	1.00
288_R	291_Q	0.813	1.00
206_A	209_R	0.810	1.00
321_A	325_Q	0.809	1.00
156_S	160_S	0.808	1.00
255_A	259_D	0.808	1.00
284_Q	288_R	0.807	1.00
307_Q	409_S	0.807	1.00
266_G	270_E	0.804	1.00
303_M	306_I	0.801	1.00
43_I	70_S	0.801	1.00
41_T	44_C	0.801	1.00
122_Q	125_E	0.798	1.00
234_E	482_T	0.792	1.00
261_L	457_I	0.789	1.00
54_V	63_G	0.788	1.00
228_E	231_A	0.788	1.00
305_D	308_S	0.787	1.00
84_S	88_T	0.783	1.00
336_D	339_D	0.783	1.00
427_D	430_T	0.780	1.00
158_K	186_A	0.780	1.00
284_Q	428_H	0.777	1.00
137_A	141_A	0.775	1.00
166_M	169_A	0.774	1.00
483_A	486_S	0.771	1.00
438_Q	441_D	0.770	1.00
91_I	94_D	0.768	1.00
51_T	63_G	0.767	1.00
40_Y	74_L	0.766	1.00
240_V	474_V	0.765	1.00
31_T	35_G	0.764	1.00
476_A	479_Q	0.764	1.00
326_E	386_L	0.764	1.00
207_R	211_F	0.764	1.00
96_K	99_N	0.764	1.00
101_R	104_R	0.762	1.00
324_A	390_L	0.762	1.00
77_L	80_V	0.762	1.00
160_S	189_E	0.762	1.00
491_G	494_R	0.762	1.00
262_Q	454_V	0.761	1.00
319_A	323_E	0.757	1.00
157_K	160_S	0.756	1.00
279_A	283_D	0.754	1.00
32_D	36_F	0.754	1.00
108_D	113_K	0.752	1.00
238_E	241_Q	0.751	1.00
103_H	107_K	0.748	1.00
265_S	454_V	0.747	1.00
170_A	196_E	0.745	1.00
84_S	87_G	0.743	1.00
375_E	382_E	0.741	1.00
47_G	67_D	0.734	1.00
246_G	467_N	0.733	1.00
277_Q	435_A	0.733	1.00
286_A	433_N	0.733	1.00
66_M	70_S	0.733	1.00
235_Q	473_S	0.731	1.00
71_T	74_L	0.730	1.00
313_V	400_D	0.729	1.00
176_V	180_S	0.728	1.00
229_I	232_A	0.728	1.00
174_L	205_V	0.727	1.00
311_E	409_S	0.727	1.00
127_K	130_A	0.726	1.00
146_E	149_A	0.726	1.00
243_I	247_T	0.726	1.00
156_S	187_M	0.722	1.00
329_R	333_L	0.720	1.00
434_E	437_Q	0.719	1.00
99_N	106_R	0.719	1.00
101_R	106_R	0.718	1.00
125_E	129_E	0.717	1.00
312_A	400_D	0.716	1.00
445_A	448_A	0.716	1.00
208_T	212_A	0.715	1.00
171_S	200_A	0.713	1.00
320_L	390_L	0.711	1.00
194_F	198_I	0.709	1.00
152_D	155_L	0.709	1.00
55_A	59_I	0.704	1.00
104_R	108_D	0.704	1.00
229_I	485_L	0.703	1.00
102_A	105_R	0.703	1.00
231_A	234_E	0.701	1.00
204_M	207_R	0.701	1.00
283_D	437_Q	0.700	1.00
100_A	103_H	0.699	1.00
197_M	201_F	0.699	1.00
461_E	465_E	0.697	1.00
268_V	443_T	0.695	1.00
392_S	396_S	0.694	1.00
266_G	269_E	0.694	1.00
165_V	191_G	0.694	1.00
47_G	53_V	0.689	1.00
481_Q	495_L	0.681	1.00
367_A	371_E	0.680	1.00
134_R	138_E	0.679	1.00
50_W	63_G	0.679	1.00
126_A	130_A	0.679	1.00
168_K	197_M	0.677	1.00
331_V	335_N	0.677	1.00
494_R	497_D	0.676	1.00
394_T	397_V	0.674	1.00
81_V	84_S	0.673	1.00
492_V	495_L	0.670	1.00
141_A	145_Q	0.669	1.00
479_Q	482_T	0.669	1.00
112_A	119_Q	0.668	1.00
32_D	39_N	0.667	1.00
99_N	103_H	0.664	1.00
113_K	116_A	0.662	1.00
170_A	193_A	0.661	1.00
331_V	384_E	0.659	1.00
416_E	419_L	0.659	1.00
47_G	63_G	0.659	1.00
291_Q	295_D	0.659	1.00
83_I	91_I	0.658	1.00
51_T	54_V	0.658	1.00
39_N	47_G	0.658	1.00
488_V	495_L	0.656	1.00
312_A	316_E	0.655	1.00
342_H	370_K	0.655	1.00
83_I	87_G	0.654	1.00
73_L	102_A	0.653	1.00
313_V	404_M	0.652	1.00
426_G	430_T	0.652	1.00
448_A	452_T	0.651	1.00
470_E	473_S	0.651	1.00
278_V	435_A	0.649	1.00
72_S	76_V	0.649	1.00
65_V	108_D	0.649	1.00
54_V	60_G	0.646	1.00
88_T	92_V	0.646	1.00
296_A	415_V	0.645	1.00
250_E	254_L	0.644	1.00
36_F	40_Y	0.644	1.00
318_N	321_A	0.643	1.00
257_A	457_I	0.642	1.00
39_N	43_I	0.641	1.00
268_V	450_A	0.641	1.00
36_F	77_L	0.640	1.00
80_V	84_S	0.640	1.00
116_A	123_A	0.639	1.00
339_D	377_N	0.638	1.00
85_S	89_I	0.636	1.00
302_Q	305_D	0.636	1.00
237_A	475_S	0.635	1.00
83_I	86_T	0.633	1.00
33_I	36_F	0.631	1.00
131_Q	134_R	0.630	1.00
126_A	129_E	0.629	1.00
490_D	494_R	0.627	1.00
329_R	382_E	0.626	1.00
320_L	397_V	0.626	1.00
452_T	456_M	0.625	1.00
200_A	494_R	0.625	1.00
265_S	450_A	0.624	1.00
240_V	471_A	0.622	1.00
463_I	467_N	0.621	1.00
69_F	108_D	0.619	1.00
105_R	112_A	0.618	1.00
309_E	312_A	0.618	1.00
282_S	429_V	0.618	1.00
103_H	106_R	0.617	1.00
289_G	293_S	0.616	1.00
145_Q	148_A	0.615	1.00
165_V	169_A	0.615	1.00
257_A	456_M	0.613	1.00
422_L	425_I	0.611	1.00
295_D	298_A	0.611	1.00
46_L	50_W	0.611	1.00
484_S	487_D	0.611	1.00
319_A	396_S	0.609	1.00
70_S	73_L	0.608	1.00
51_T	60_G	0.608	1.00
373_A	376_T	0.607	1.00
163_S	187_M	0.606	1.00
314_V	405_A	0.605	1.00
291_Q	421_A	0.604	1.00
310_T	313_V	0.603	1.00
50_W	54_V	0.603	1.00
282_S	432_V	0.601	1.00
36_F	39_N	0.601	1.00
304_T	307_Q	0.601	1.00
259_D	262_Q	0.601	1.00
298_A	302_Q	0.599	1.00
133_A	137_A	0.598	1.00
165_V	198_I	0.597	1.00
114_R	117_D	0.596	1.00
119_Q	123_A	0.595	1.00
186_A	189_E	0.595	1.00
454_V	458_E	0.593	1.00
253_R	456_M	0.593	1.00
405_A	409_S	0.592	1.00
63_G	66_M	0.592	1.00
263_S	449_S	0.592	1.00
327_I	387_V	0.592	1.00
310_T	404_M	0.591	1.00
392_S	395_Q	0.583	1.00
303_M	415_V	0.583	1.00
272_A	275_A	0.581	1.00
431_D	435_A	0.579	1.00
70_S	77_L	0.579	1.00
300_V	415_V	0.578	1.00
267_A	445_A	0.578	1.00
118_E	121_A	0.577	1.00
370_K	374_E	0.576	1.00
242_E	470_E	0.575	1.00
295_D	414_T	0.575	1.00
120_R	123_A	0.574	1.00
148_A	156_S	0.574	1.00
270_E	438_Q	0.574	1.00
336_D	375_E	0.573	1.00
229_I	481_Q	0.571	1.00
62_A	66_M	0.571	1.00
274_S	435_A	0.570	1.00
290_R	426_G	0.568	1.00
391_L	395_Q	0.567	1.00
106_R	110_E	0.566	1.00
474_V	477_A	0.563	1.00
102_A	112_A	0.562	1.00
441_D	448_A	0.559	1.00
250_E	464_S	0.557	1.00
136_E	139_T	0.557	1.00
296_A	299_A	0.556	1.00
408_V	411_G	0.556	1.00
253_R	256_D	0.555	1.00
33_I	81_V	0.553	1.00
295_D	418_A	0.551	1.00
271_V	442_A	0.551	1.00
284_Q	424_E	0.550	1.00
451_D	454_V	0.550	1.00
40_Y	43_I	0.546	1.00
88_T	94_D	0.546	1.00
190_V	194_F	0.546	1.00
389_N	393_S	0.545	1.00
62_A	111_Q	0.544	1.00
289_G	292_G	0.543	1.00
330_V	387_V	0.543	1.00
158_K	161_E	0.542	0.99
87_G	92_V	0.542	0.99
297_A	423_E	0.541	0.99
62_A	115_R	0.540	0.99
78_I	81_V	0.539	0.99
251_H	465_E	0.538	0.99
185_D	191_G	0.537	0.99
172_G	197_M	0.536	0.99
97_T	101_R	0.535	0.99
445_A	449_S	0.535	0.99
421_A	425_I	0.535	0.99
102_A	109_A	0.534	0.99
466_Q	470_E	0.531	0.99
249_R	459_E	0.531	0.99
304_T	412_T	0.531	0.99
478_A	482_T	0.530	0.99
254_L	457_I	0.530	0.99
488_V	492_V	0.528	0.99
282_S	436_V	0.527	0.99
330_V	379_A	0.526	0.99
154_Q	157_K	0.524	0.99
265_S	447_A	0.524	0.99
242_E	466_Q	0.524	0.99
257_A	261_L	0.523	0.99
120_R	127_K	0.522	0.99
275_A	278_V	0.521	0.99
262_Q	265_S	0.521	0.99
263_S	445_A	0.519	0.99
240_V	243_I	0.518	0.99
281_V	435_A	0.516	0.99
74_L	77_L	0.516	0.99
233_S	478_A	0.515	0.99
175_T	202_E	0.514	0.99
169_A	174_L	0.514	0.99
95_L	99_N	0.513	0.99
267_A	442_A	0.512	0.99
387_V	391_L	0.511	0.99
260_E	449_S	0.511	0.99
156_S	163_S	0.509	0.99
297_A	419_L	0.509	0.99
415_V	419_L	0.508	0.99
295_D	421_A	0.508	0.99
324_A	391_L	0.508	0.99
263_S	267_A	0.508	0.99
69_F	73_L	0.507	0.99
346_L	354_R	0.507	0.99
269_E	447_A	0.501	0.99
419_L	423_E	0.501	0.99
279_A	433_N	0.500	0.99
229_I	484_S	0.500	0.99

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3zx6A	2	0.5672	100	0.389	Contact Map
2ch7A	2	0.5765	100	0.492	Contact Map
1qu7A	2	0.4235	100	0.527	Contact Map
3g67A	2	0.3899	100	0.593	Contact Map
4i3mA	2	0.2743	99.9	0.751	Contact Map
2f95B	2	0.0914	99.1	0.865	Contact Map
4cq4A	4	0.1604	99.1	0.868	Contact Map
3zccA	2	0.2052	98.8	0.879	Contact Map
4gycB	2	0.1063	98.8	0.879	Contact Map
2rm8A	1	0.1269	98.1	0.903	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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