HEM1 - HALSA - GREMLIN Contacts

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HEM1 - Glutamyl-tRNA reductase

UniProt:	Q9HP72	Sequences: MNGNTGVVSGVRVSHETASLDELAAASAASTEAALDALLEQPPVEEAFVLQTCHRVEAYVVTADQASGRRALGGAGFNPAGGGAISMGHEDSLRHLLRVAAGLESLVVGEDQILGQLRDAYDAAKDAGGIDHVLREAVTKAMHVGERARTETAINEGATSLGTAAVRLAERKTQLADARAVVVGAGEMGALAAKAFASATVAEIVIANRTPARAVRVADMVSVPAEATTLADARGRLDAADVVVTATGSPEHVLPASAFADAGDTVVVDLAQPRDVAPGAGGHDGVAVHDLDDLEAVTAATRERREDAAREVEAMIETEFERLLTQYKRKRADEVIARMYESADRLKSREVQTAVHRLEAESGSLSADEREVVESMADALVSQLLAAPTKSLRDAAAEDDWSTIATALELFNPEFEDGMPFDASRGGDAASAESED	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	436 (399)
Sequences:	2489 (1658)
Seq/√Len:	83.0

ECOLI - HEM1
BACSU - HEM1
HALSA - HEM1
SULSO - HEM1

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
267_V	276_V	6.553	1.00
98_R	313_E	6.482	1.00
147_R	151_E	4.715	1.00
271_A	275_D	3.953	1.00
148_A	312_V	3.825	1.00
179_R	203_E	3.757	1.00
179_R	205_V	3.643	1.00
48_F	138_V	3.542	1.00
46_E	131_D	3.493	1.00
203_E	226_E	3.448	1.00
245_T	275_D	3.435	1.00
366_S	369_E	3.008	1.00
245_T	276_V	2.917	1.00
12_R	85_I	2.895	1.00
94_R	317_E	2.842	1.00
308_A	311_E	2.794	1.00
232_D	235_G	2.786	1.00
347_K	377_A	2.751	1.00
344_D	347_K	2.720	1.00
183_V	254_L	2.664	1.00
19_S	83_G	2.626	1.00
147_R	319_E	2.545	1.00
259_F	267_V	2.520	1.00
207_A	228_T	2.491	1.00
256_A	279_G	2.358	1.00
236_R	239_A	2.236	1.00
256_A	260_A	2.231	1.00
181_V	207_A	2.222	1.00
211_P	229_T	2.203	1.00
96_L	117_L	2.181	1.00
170_E	199_A	2.177	1.00
211_P	215_V	2.176	1.00
267_V	286_V	2.167	1.00
215_V	219_D	2.149	1.00
147_R	318_T	2.145	1.00
343_A	384_L	2.083	1.00
211_P	227_A	2.065	1.00
180_A	201_V	2.040	1.00
98_R	104_E	2.037	1.00
303_E	306_E	1.977	1.00
90_E	324_L	1.973	1.00
252_H	277_A	1.968	1.00
319_E	322_R	1.966	1.00
137_A	323_L	1.960	1.00
276_V	280_A	1.946	1.00
400_D	403_T	1.890	1.00
340_Y	382_S	1.888	1.00
245_T	271_A	1.854	1.00
194_K	220_M	1.852	1.00
259_F	262_A	1.848	1.00
22_E	274_R	1.830	1.00
255_P	258_A	1.829	1.00
112_Q	191_L	1.825	1.00
350_E	353_T	1.790	1.00
125_K	135_R	1.769	1.00
228_T	236_R	1.763	1.00
153_A	156_E	1.762	1.00
34_A	49_V	1.751	1.00
59_Y	138_V	1.740	1.00
205_V	228_T	1.739	1.00
340_Y	389_T	1.732	1.00
35_L	129_G	1.729	1.00
247_T	275_D	1.720	1.00
185_A	208_N	1.701	1.00
256_A	282_G	1.696	1.00
344_D	348_S	1.691	1.00
10_G	59_Y	1.684	1.00
124_A	129_G	1.672	1.00
39_L	129_G	1.646	1.00
91_D	94_R	1.616	1.00
101_A	148_A	1.612	1.00
350_E	379_A	1.609	1.00
114_L	145_G	1.585	1.00
257_S	260_A	1.563	1.00
259_F	280_A	1.562	1.00
142_M	145_G	1.521	0.99
354_A	372_V	1.498	0.99
355_V	370_R	1.497	0.99
279_G	282_G	1.490	0.99
234_R	258_A	1.486	0.99
121_Y	135_R	1.461	0.99
26_A	34_A	1.460	0.99
272_Q	291_L	1.459	0.99
50_L	117_L	1.449	0.99
177_D	202_A	1.447	0.99
13_V	24_A	1.437	0.99
237_L	243_V	1.416	0.99
76_G	79_P	1.415	0.99
190_A	220_M	1.408	0.99
289_H	293_D	1.401	0.99
59_Y	99_V	1.388	0.99
158_A	163_T	1.386	0.99
350_E	383_Q	1.379	0.99
310_R	313_E	1.358	0.99
93_L	137_A	1.356	0.99
46_E	61_V	1.356	0.99
343_A	385_L	1.352	0.99
259_F	265_T	1.350	0.99
93_L	320_F	1.349	0.99
144_V	316_I	1.332	0.99
56_V	102_G	1.328	0.99
158_A	164_A	1.327	0.99
258_A	277_A	1.326	0.99
207_A	233_A	1.318	0.99
347_K	378_D	1.312	0.98
342_S	387_A	1.306	0.98
180_A	196_F	1.305	0.98
165_A	268_V	1.304	0.98
295_E	299_A	1.295	0.98
121_Y	125_K	1.293	0.98
181_V	236_R	1.290	0.98
226_E	236_R	1.290	0.98
101_A	312_V	1.288	0.98
99_V	104_E	1.288	0.98
207_A	230_L	1.287	0.98
347_K	374_E	1.285	0.98
45_E	63_A	1.285	0.98
381_V	384_L	1.282	0.98
61_V	131_D	1.280	0.98
193_A	221_V	1.279	0.98
403_T	407_A	1.276	0.98
339_M	413_P	1.272	0.98
243_V	267_V	1.266	0.98
375_S	379_A	1.265	0.98
370_R	374_E	1.253	0.98
172_K	287_A	1.252	0.98
117_L	138_V	1.247	0.98
371_E	375_S	1.246	0.98
391_S	394_D	1.226	0.98
165_A	270_L	1.225	0.98
252_H	278_P	1.222	0.98
236_R	240_A	1.218	0.97
130_I	135_R	1.214	0.97
93_L	324_L	1.204	0.97
323_L	326_Q	1.202	0.97
161_L	188_M	1.200	0.97
237_L	262_A	1.199	0.97
189_G	217_V	1.185	0.97
136_E	326_Q	1.182	0.97
335_V	413_P	1.181	0.97
387_A	412_N	1.181	0.97
179_R	239_A	1.174	0.97
85_I	104_E	1.173	0.97
13_V	84_A	1.172	0.97
257_S	279_G	1.167	0.97
212_A	216_R	1.163	0.97
174_Q	177_D	1.159	0.97
9_S	60_V	1.158	0.97
59_Y	102_G	1.154	0.97
101_A	144_V	1.153	0.97
161_L	270_L	1.152	0.96
144_V	315_M	1.140	0.96
196_F	201_V	1.130	0.96
205_V	226_E	1.130	0.96
247_T	253_V	1.127	0.96
255_P	277_A	1.126	0.96
181_V	240_A	1.124	0.96
182_V	196_F	1.123	0.96
145_G	157_G	1.123	0.96
16_E	104_E	1.122	0.96
167_R	199_A	1.122	0.96
205_V	240_A	1.121	0.96
395_A	399_D	1.111	0.96
97_L	320_F	1.110	0.96
49_V	58_A	1.100	0.95
102_G	108_V	1.089	0.95
140_K	144_V	1.087	0.95
228_T	232_D	1.086	0.95
8_V	133_V	1.085	0.95
317_E	321_E	1.082	0.95
14_S	104_E	1.082	0.95
235_G	239_A	1.079	0.95
254_L	267_V	1.076	0.95
251_E	255_P	1.069	0.95
253_V	275_D	1.061	0.94
24_A	80_A	1.059	0.94
277_A	281_G	1.057	0.94
205_V	236_R	1.051	0.94
181_V	228_T	1.046	0.94
20_L	272_Q	1.041	0.94
50_L	120_A	1.034	0.94
251_E	257_S	1.032	0.94
135_R	139_T	1.031	0.94
267_V	288_V	1.031	0.94
39_L	47_A	1.023	0.93
158_A	167_R	1.018	0.93
281_G	288_V	1.018	0.93
367_A	370_R	1.018	0.93
216_R	219_D	1.017	0.93
32_E	127_A	1.015	0.93
178_A	242_V	1.013	0.93
140_K	319_E	1.010	0.93
207_A	229_T	1.005	0.93
174_Q	399_D	1.001	0.93
257_S	261_D	0.999	0.92
249_S	275_D	0.995	0.92
124_A	130_I	0.994	0.92
123_A	127_A	0.993	0.92
140_K	143_H	0.993	0.92
94_R	320_F	0.991	0.92
290_D	293_D	0.990	0.92
368_D	371_E	0.983	0.92
348_S	374_E	0.982	0.92
350_E	375_S	0.977	0.92
228_T	233_A	0.976	0.92
339_M	385_L	0.970	0.91
107_V	296_A	0.968	0.91
377_A	380_L	0.960	0.91
122_D	126_D	0.954	0.91
122_D	125_K	0.953	0.91
15_H	106_L	0.952	0.91
48_F	130_I	0.951	0.90
209_R	273_P	0.951	0.90
182_V	193_A	0.950	0.90
394_D	398_E	0.949	0.90
330_K	333_D	0.947	0.90
172_K	242_V	0.946	0.90
373_V	376_M	0.941	0.90
251_E	277_A	0.937	0.90
139_T	143_H	0.929	0.89
314_A	317_E	0.925	0.89
36_D	127_A	0.920	0.89
191_L	195_A	0.918	0.89
368_D	372_V	0.913	0.89
214_A	218_A	0.912	0.89
354_A	358_L	0.911	0.88
211_P	230_L	0.909	0.88
229_T	232_D	0.907	0.88
179_R	202_A	0.905	0.88
202_A	226_E	0.901	0.88
101_A	315_M	0.900	0.88
247_T	271_A	0.897	0.88
351_V	373_V	0.892	0.87
403_T	406_T	0.892	0.87
168_L	289_H	0.887	0.87
402_S	406_T	0.877	0.87
90_E	321_E	0.877	0.87
314_A	318_T	0.876	0.86
123_A	126_D	0.875	0.86
351_V	374_E	0.875	0.86
204_I	225_A	0.875	0.86
33_A	36_D	0.871	0.86
139_T	142_M	0.870	0.86
38_L	47_A	0.868	0.86
87_M	91_D	0.864	0.86
169_A	266_V	0.862	0.86
132_H	330_K	0.861	0.86
374_E	378_D	0.860	0.85
26_A	73_G	0.860	0.85
339_M	411_F	0.859	0.85
136_E	330_K	0.858	0.85
212_A	215_V	0.855	0.85
146_E	150_T	0.853	0.85
47_A	58_A	0.843	0.84
111_D	149_R	0.841	0.84
64_D	68_G	0.840	0.84
354_A	376_M	0.839	0.84
48_F	120_A	0.838	0.84
255_P	279_G	0.838	0.84
30_S	73_G	0.836	0.84
161_L	291_L	0.836	0.84
264_D	287_A	0.831	0.83
267_V	280_A	0.829	0.83
232_D	257_S	0.822	0.83
254_L	258_A	0.822	0.83
183_V	276_V	0.822	0.83
335_V	338_R	0.820	0.83
12_R	146_E	0.820	0.83
277_A	280_A	0.819	0.83
107_V	164_A	0.817	0.82
106_L	291_L	0.817	0.82
44_V	47_A	0.816	0.82
118_R	146_E	0.814	0.82
181_V	230_L	0.808	0.82
148_A	315_M	0.806	0.82
102_G	155_N	0.805	0.81
306_E	310_R	0.805	0.81
17_T	85_I	0.800	0.81
36_D	40_E	0.799	0.81
342_S	345_R	0.799	0.81
304_R	307_D	0.798	0.81
7_V	10_G	0.795	0.81
316_I	342_S	0.794	0.81
173_T	177_D	0.794	0.81
154_I	294_L	0.792	0.80
246_A	270_L	0.784	0.80
266_V	287_A	0.783	0.80
349_R	352_Q	0.781	0.79
183_V	243_V	0.780	0.79
28_A	119_D	0.777	0.79
404_I	410_L	0.775	0.79
141_A	145_G	0.773	0.79
95_H	104_E	0.772	0.79
395_A	404_I	0.771	0.79
31_T	123_A	0.766	0.78
193_A	225_A	0.766	0.78
59_Y	117_L	0.765	0.78
405_A	408_L	0.765	0.78
178_A	241_D	0.762	0.78
353_T	379_A	0.761	0.78
234_R	251_E	0.758	0.77
44_V	62_T	0.758	0.77
107_V	161_L	0.757	0.77
100_A	117_L	0.756	0.77
152_T	315_M	0.756	0.77
340_Y	386_A	0.755	0.77
326_Q	329_R	0.753	0.77
162_G	192_A	0.753	0.77
192_A	244_V	0.753	0.77
103_L	313_E	0.752	0.77
137_A	326_Q	0.751	0.77
95_H	99_V	0.747	0.76
280_A	283_H	0.747	0.76
158_A	301_T	0.746	0.76
389_T	393_R	0.744	0.76
241_D	263_G	0.743	0.76
274_R	292_D	0.741	0.76
210_T	214_A	0.739	0.76
111_D	145_G	0.738	0.76
119_D	243_V	0.736	0.75
354_A	377_A	0.733	0.75
237_L	254_L	0.733	0.75
244_V	270_L	0.732	0.75
19_S	22_E	0.732	0.75
37_A	286_V	0.731	0.75
374_E	377_A	0.729	0.75
256_A	277_A	0.727	0.74
152_T	169_A	0.726	0.74
154_I	343_A	0.726	0.74
316_I	320_F	0.726	0.74
339_M	388_P	0.725	0.74
368_D	373_V	0.725	0.74
185_A	213_R	0.724	0.74
216_R	220_M	0.722	0.74
54_H	292_D	0.722	0.74
249_S	271_A	0.720	0.74
151_E	315_M	0.719	0.74
8_V	92_S	0.717	0.73
35_L	47_A	0.716	0.73
14_S	108_V	0.716	0.73
345_R	349_R	0.715	0.73
261_D	279_G	0.715	0.73
133_V	326_Q	0.713	0.73
12_R	17_T	0.713	0.73
381_V	385_L	0.711	0.73
335_V	392_L	0.708	0.72
309_A	312_V	0.708	0.72
185_A	206_I	0.708	0.72
24_A	73_G	0.707	0.72
30_S	33_A	0.706	0.72
158_A	309_A	0.705	0.72
10_G	92_S	0.704	0.72
171_R	300_A	0.700	0.72
192_A	210_T	0.698	0.71
243_V	265_T	0.698	0.71
210_T	213_R	0.698	0.71
112_Q	274_R	0.697	0.71
65_Q	68_G	0.694	0.71
376_M	380_L	0.694	0.71
326_Q	333_D	0.692	0.71
346_L	376_M	0.692	0.71
114_L	142_M	0.692	0.71
14_S	85_I	0.691	0.71
345_R	348_S	0.690	0.71
181_V	336_I	0.689	0.70
97_L	334_E	0.688	0.70
12_R	104_E	0.687	0.70
185_A	217_V	0.686	0.70
162_G	166_V	0.686	0.70
26_A	31_T	0.686	0.70
14_S	335_V	0.685	0.70
197_A	221_V	0.682	0.70
136_E	142_M	0.679	0.69
149_R	354_A	0.679	0.69
7_V	11_V	0.677	0.69
132_H	135_R	0.674	0.69
152_T	308_A	0.674	0.69
404_I	408_L	0.673	0.69
118_R	142_M	0.673	0.69
248_G	252_H	0.673	0.69
208_N	214_A	0.671	0.68
37_A	50_L	0.670	0.68
8_V	61_V	0.670	0.68
29_A	32_E	0.669	0.68
106_L	161_L	0.668	0.68
256_A	283_H	0.666	0.68
168_L	294_L	0.665	0.68
254_L	259_F	0.663	0.67
311_E	314_A	0.663	0.67
384_L	389_T	0.662	0.67
167_R	270_L	0.662	0.67
335_V	339_M	0.662	0.67
179_R	240_A	0.662	0.67
64_D	67_S	0.661	0.67
30_S	37_A	0.660	0.67
52_T	55_R	0.660	0.67
164_A	298_T	0.660	0.67
60_V	72_L	0.660	0.67
245_T	280_A	0.658	0.67
237_L	240_A	0.658	0.67
226_E	239_A	0.655	0.67
396_A	399_D	0.655	0.67
347_K	380_L	0.654	0.66
152_T	312_V	0.653	0.66
32_E	36_D	0.653	0.66
358_L	372_V	0.649	0.66
12_R	87_M	0.648	0.66
201_V	204_I	0.647	0.66
407_A	410_L	0.645	0.65
250_P	271_A	0.645	0.65
168_L	171_R	0.644	0.65
100_A	141_A	0.642	0.65
274_R	288_V	0.641	0.65
90_E	384_L	0.640	0.65
340_Y	388_P	0.639	0.65
23_L	79_P	0.637	0.64
183_V	192_A	0.636	0.64
145_G	149_R	0.635	0.64
346_L	380_L	0.633	0.64
233_A	240_A	0.633	0.64
217_V	220_M	0.632	0.64
180_A	266_V	0.632	0.64
343_A	381_V	0.631	0.64
159_T	305_R	0.630	0.64
162_G	270_L	0.627	0.63
11_V	69_R	0.627	0.63
121_Y	139_T	0.626	0.63
125_K	139_T	0.624	0.63
247_T	273_P	0.623	0.63
403_T	408_L	0.623	0.63
210_T	393_R	0.621	0.62
234_R	261_D	0.621	0.62
97_L	339_M	0.619	0.62
179_R	403_T	0.619	0.62
120_A	124_A	0.616	0.62
305_R	308_A	0.615	0.62
341_E	345_R	0.614	0.62
75_A	80_A	0.614	0.62
69_R	72_L	0.614	0.62
37_A	74_G	0.613	0.61
195_A	312_V	0.613	0.61
112_Q	188_M	0.611	0.61
48_F	117_L	0.610	0.61
201_V	242_V	0.608	0.61
115_G	338_R	0.606	0.61
177_D	180_A	0.605	0.60
100_A	130_I	0.604	0.60
106_L	110_E	0.604	0.60
10_G	85_I	0.602	0.60
303_E	316_I	0.600	0.60
370_R	373_V	0.599	0.60
225_A	266_V	0.599	0.60
208_N	213_R	0.598	0.60
190_A	246_A	0.597	0.59
96_L	138_V	0.595	0.59
274_R	291_L	0.594	0.59
315_M	330_K	0.594	0.59
172_K	266_V	0.593	0.59
195_A	291_L	0.590	0.59
181_V	233_A	0.589	0.58
121_Y	142_M	0.588	0.58
408_L	412_N	0.587	0.58
290_D	369_E	0.587	0.58
270_L	297_V	0.586	0.58
258_A	279_G	0.586	0.58
316_I	350_E	0.585	0.58
26_A	49_V	0.584	0.58
190_A	194_K	0.582	0.57
244_V	275_D	0.582	0.57
40_E	44_V	0.582	0.57
262_A	265_T	0.581	0.57
250_P	275_D	0.581	0.57
11_V	86_S	0.580	0.57
48_F	96_L	0.580	0.57
35_L	39_L	0.579	0.57
12_R	18_A	0.579	0.57
169_A	242_V	0.579	0.57
404_I	407_A	0.579	0.57
144_V	312_V	0.578	0.57
13_V	18_A	0.578	0.57
119_D	122_D	0.576	0.57
169_A	175_L	0.575	0.57
188_M	294_L	0.575	0.57
376_M	379_A	0.574	0.56
244_V	268_V	0.573	0.56
32_E	123_A	0.573	0.56
208_N	294_L	0.573	0.56
178_A	285_G	0.573	0.56
378_D	393_R	0.572	0.56
75_A	219_D	0.572	0.56
97_L	106_L	0.572	0.56
13_V	83_G	0.571	0.56
164_A	297_V	0.571	0.56
117_L	242_V	0.570	0.56
367_A	371_E	0.569	0.56
76_G	127_A	0.564	0.55
48_F	59_Y	0.563	0.55
392_L	404_I	0.562	0.55
292_D	326_Q	0.562	0.55
161_L	294_L	0.562	0.55
56_V	333_D	0.561	0.55
130_I	139_T	0.561	0.55
101_A	114_L	0.560	0.55
47_A	60_V	0.560	0.55
68_G	216_R	0.555	0.54
94_R	98_R	0.553	0.54
317_E	320_F	0.553	0.54
153_A	308_A	0.551	0.53
270_L	379_A	0.549	0.53
161_L	315_M	0.548	0.53
118_R	268_V	0.548	0.53
106_L	295_E	0.547	0.53
228_T	254_L	0.546	0.53
387_A	391_S	0.546	0.53
151_E	319_E	0.545	0.53
353_T	357_R	0.545	0.53
189_G	290_D	0.545	0.53
377_A	384_L	0.544	0.53
353_T	386_A	0.544	0.53
215_V	229_T	0.544	0.53
24_A	51_Q	0.543	0.52
210_T	227_A	0.543	0.52
107_V	136_E	0.542	0.52
42_P	45_E	0.541	0.52
94_R	313_E	0.541	0.52
136_E	323_L	0.541	0.52
111_D	187_E	0.541	0.52
234_R	257_S	0.540	0.52
91_D	317_E	0.538	0.52
240_A	265_T	0.536	0.51
335_V	411_F	0.536	0.51
208_N	217_V	0.535	0.51
145_G	312_V	0.534	0.51
104_E	159_T	0.533	0.51
124_A	151_E	0.533	0.51
369_E	373_V	0.532	0.51
47_A	215_V	0.532	0.51
209_R	247_T	0.532	0.51
117_L	122_D	0.531	0.51
124_A	127_A	0.531	0.51
183_V	233_A	0.531	0.51
247_T	250_P	0.531	0.51
111_D	182_V	0.531	0.51
328_K	396_A	0.531	0.51
243_V	401_W	0.530	0.51
325_T	397_A	0.530	0.51
108_V	137_A	0.530	0.51
237_L	259_F	0.530	0.51
145_G	148_A	0.529	0.51
320_F	323_L	0.529	0.51
230_L	233_A	0.529	0.51
321_E	325_T	0.528	0.50
215_V	227_A	0.524	0.50
174_Q	306_E	0.524	0.50
187_E	292_D	0.524	0.50
394_D	397_A	0.524	0.50
23_L	27_S	0.523	0.50
306_E	313_E	0.523	0.50
100_A	104_E	0.522	0.50
236_R	381_V	0.521	0.49
391_S	409_E	0.521	0.49
403_T	410_L	0.521	0.49
237_L	265_T	0.520	0.49
53_C	116_Q	0.519	0.49
12_R	191_L	0.519	0.49
168_L	309_A	0.519	0.49
56_V	138_V	0.518	0.49
162_G	187_E	0.518	0.49
373_V	383_Q	0.517	0.49
354_A	357_R	0.516	0.49
11_V	72_L	0.515	0.49
274_R	290_D	0.515	0.49
33_A	37_A	0.514	0.49
406_T	412_N	0.513	0.48
162_G	167_R	0.513	0.48
173_T	178_A	0.512	0.48
30_S	36_D	0.510	0.48
7_V	89_H	0.509	0.48
395_A	400_D	0.509	0.48
62_T	65_Q	0.508	0.48
56_V	288_V	0.508	0.48
300_A	304_R	0.508	0.48
160_S	288_V	0.508	0.48
10_G	33_A	0.507	0.48
245_T	267_V	0.507	0.48
97_L	140_K	0.507	0.48
377_A	383_Q	0.506	0.48
111_D	142_M	0.506	0.48
128_G	307_D	0.506	0.48
96_L	196_F	0.505	0.47
243_V	314_A	0.504	0.47
149_R	273_P	0.504	0.47
167_R	170_E	0.503	0.47
332_A	393_R	0.502	0.47
371_E	374_E	0.502	0.47
108_V	374_E	0.502	0.47
253_V	271_A	0.501	0.47
142_M	155_N	0.500	0.47

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4n7rA	2	0.8784	100	0.348	Contact Map
1gpjA	2	0.8853	100	0.448	Contact Map
4ppmA	2	0.1583	99.9	0.799	Contact Map
1edzA	2	0.6583	99.9	0.808	Contact Map
3u62A	1	0.5344	99.9	0.819	Contact Map
1p77A	1	0.5665	99.9	0.829	Contact Map
3oj0A	1	0.3165	99.8	0.84	Contact Map
1nytA	6	0.5803	99.8	0.842	Contact Map
3fbtA	2	0.5757	99.8	0.843	Contact Map
2eggA	5	0.5872	99.8	0.848	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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