Q9HP54 - HALSA - GREMLIN Contacts

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Q9HP54 - Uncharacterized protein

UniProt:	Q9HP54	Sequences: MIAIVGGGIAGLSAARRLQQHGVDARVFEASATVGGLAATHETAGDPIEAFYHHLSAAEETIIDRIEELGLGDDLRWPIGKNAYYVDGTVHPMDTPWEILAFPHLSLYDTARLAMLTQELDVRGGLPSFDTYEDLTDFEHVGVEQFLCEHTTRGVYEQFFEPLLEAKFGSRMDDVSAAWLLGRIKFRGERDLLRGEPLGYLDGGFGRLLDALVEDVGREHIETGARVTAIQRDDAGDVTGVTVDSEAGTERVDADGVIVAAMPTVLESLTGYECDITFQGTVCSIVSMDEALTDTYWLNIADDAPFGALIEHTNFIDPARYGGEHLLYVPKYVQSRDDEVWQMSDEEVREHWLSGIEALFPDFDRESVNWVETNRNPRTAPVYERGYLDMVVPYDLASEGHDGVYYAGMASRAQYPERSLNGGIVAGNEAADRILDGA	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	438 (402)
Sequences:	15646 (12446)
Seq/√Len:	620.8

ECOLI - GLF
BACSU - PPOX YOBN
HALSA - Q9HP54 Q9HRU3 Q9HP88 Q9HSE1 Q9HPD8 Q9HRN2
SULSO - Q97W24 Q97UT6 Q97YW3

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
3_A	254_A	3.982	1.00
26_R	222_E	3.753	1.00
30_A	226_R	3.718	1.00
34_V	223_T	3.506	1.00
229_A	242_T	3.471	1.00
245_S	250_E	3.436	1.00
14_A	258_I	3.165	1.00
28_F	252_V	3.026	1.00
3_A	28_F	2.938	1.00
34_V	213_V	2.925	1.00
32_A	224_G	2.778	1.00
242_T	251_R	2.750	1.00
427_G	431_A	2.742	1.00
259_V	266_L	2.721	1.00
3_A	252_V	2.711	1.00
7_G	34_V	2.707	1.00
231_Q	242_T	2.667	1.00
206_G	210_D	2.587	1.00
3_A	241_V	2.579	1.00
24_D	220_H	2.569	1.00
225_A	243_V	2.543	1.00
344_S	347_E	2.504	1.00
228_T	244_D	2.499	1.00
226_R	244_D	2.495	1.00
231_Q	240_G	2.479	1.00
207_R	210_D	2.379	1.00
243_V	252_V	2.330	1.00
5_V	259_V	2.326	1.00
260_A	407_A	2.267	1.00
28_F	222_E	2.202	1.00
243_V	249_T	2.200	1.00
213_V	217_G	2.199	1.00
5_V	261_A	2.175	1.00
240_G	251_R	2.161	1.00
141_V	149_E	2.151	1.00
222_E	225_A	2.129	1.00
17_R	428_N	2.113	1.00
222_E	250_E	2.113	1.00
28_F	254_A	2.110	1.00
213_V	221_I	2.103	1.00
40_T	47_P	2.017	1.00
373_T	376_N	2.008	1.00
144_E	148_C	1.998	1.00
10_A	260_A	1.997	1.00
42_E	47_P	1.995	1.00
256_G	405_Y	1.968	1.00
107_L	110_T	1.933	1.00
17_R	20_Q	1.912	1.00
9_I	420_L	1.912	1.00
211_A	214_E	1.844	1.00
33_T	39_A	1.830	1.00
243_V	250_E	1.828	1.00
16_R	215_D	1.808	1.00
349_R	371_V	1.805	1.00
13_S	424_I	1.790	1.00
350_E	354_S	1.785	1.00
298_L	301_A	1.780	1.00
258_I	434_I	1.757	1.00
289_D	367_S	1.746	1.00
142_G	145_Q	1.746	1.00
240_G	253_D	1.742	1.00
357_E	362_D	1.737	1.00
228_T	242_T	1.699	1.00
222_E	252_V	1.674	1.00
225_A	245_S	1.665	1.00
17_R	432_D	1.664	1.00
365_R	368_V	1.649	1.00
346_E	350_E	1.630	1.00
217_G	220_H	1.599	1.00
15_A	27_V	1.597	1.00
20_Q	68_E	1.593	1.00
231_Q	251_R	1.589	1.00
289_D	369_N	1.556	1.00
144_E	173_D	1.545	1.00
3_A	26_R	1.540	1.00
103_P	107_L	1.529	1.00
324_E	369_N	1.524	1.00
106_S	110_T	1.516	1.00
225_A	250_E	1.495	1.00
34_V	209_L	1.485	1.00
215_D	219_E	1.484	1.00
72_G	202_D	1.475	1.00
227_V	241_V	1.463	1.00
19_Q	219_E	1.462	1.00
26_R	220_H	1.460	1.00
261_A	266_L	1.458	1.00
407_A	430_A	1.449	1.00
26_R	254_A	1.444	1.00
148_C	157_E	1.443	1.00
110_T	113_L	1.442	1.00
153_R	157_E	1.424	1.00
34_V	221_I	1.422	1.00
345_D	375_R	1.421	1.00
107_L	111_A	1.417	1.00
37_L	409_M	1.416	1.00
103_P	110_T	1.413	1.00
357_E	364_D	1.408	1.00
4_I	15_A	1.407	1.00
110_T	114_A	1.405	1.00
38_A	209_L	1.387	1.00
141_V	145_Q	1.371	1.00
328_Y	332_Y	1.369	1.00
296_Y	300_I	1.367	1.00
28_F	227_V	1.353	1.00
74_D	202_D	1.352	1.00
205_F	420_L	1.350	1.00
391_V	394_Y	1.334	1.00
103_P	106_S	1.327	1.00
405_Y	430_A	1.326	1.00
26_R	252_V	1.321	1.00
42_E	45_G	1.320	1.00
214_E	217_G	1.313	1.00
11_G	260_A	1.312	1.00
46_D	287_S	1.301	1.00
28_F	243_V	1.299	1.00
16_R	20_Q	1.297	1.00
111_A	117_T	1.292	1.00
19_Q	216_V	1.290	1.00
228_T	249_T	1.283	1.00
100_L	103_P	1.282	1.00
378_R	381_P	1.268	1.00
330_P	333_V	1.261	1.00
216_V	221_I	1.257	1.00
19_Q	25_A	1.256	1.00
368_V	371_V	1.252	1.00
64_D	68_E	1.251	1.00
289_D	324_E	1.249	1.00
245_S	249_T	1.244	1.00
239_T	403_G	1.243	1.00
27_V	221_I	1.242	1.00
42_E	206_G	1.240	1.00
104_H	107_L	1.237	1.00
254_A	257_V	1.237	1.00
381_P	384_E	1.237	1.00
256_G	434_I	1.235	1.00
26_R	255_D	1.232	1.00
7_G	27_V	1.224	1.00
411_S	429_E	1.223	1.00
64_D	428_N	1.221	1.00
284_S	373_T	1.220	1.00
244_D	249_T	1.212	1.00
340_V	343_M	1.203	1.00
430_A	433_R	1.202	1.00
379_T	382_V	1.199	1.00
349_R	353_L	1.198	1.00
10_A	426_A	1.196	1.00
210_D	214_E	1.193	1.00
10_A	407_A	1.186	1.00
288_M	353_L	1.184	1.00
91_H	96_P	1.174	1.00
286_V	353_L	1.169	1.00
101_A	107_L	1.168	1.00
114_A	118_Q	1.152	1.00
384_E	390_M	1.143	1.00
28_F	225_A	1.142	1.00
288_M	368_V	1.140	1.00
17_R	427_G	1.140	1.00
330_P	334_Q	1.135	1.00
24_D	255_D	1.134	1.00
112_R	115_M	1.133	1.00
392_V	395_D	1.133	1.00
411_S	426_A	1.130	1.00
67_E	72_G	1.127	1.00
16_R	212_L	1.126	1.00
101_A	108_Y	1.120	1.00
429_E	433_R	1.114	1.00
103_P	108_Y	1.107	1.00
233_D	253_D	1.107	1.00
328_Y	333_V	1.104	1.00
108_Y	111_A	1.100	1.00
104_H	110_T	1.100	1.00
262_M	265_V	1.100	1.00
171_R	174_D	1.100	1.00
343_M	347_E	1.100	1.00
103_P	117_T	1.090	1.00
23_V	26_R	1.087	1.00
381_P	385_R	1.084	1.00
361_P	364_D	1.083	1.00
351_H	354_S	1.072	1.00
201_L	208_L	1.071	1.00
290_E	367_S	1.071	1.00
270_T	274_C	1.068	1.00
386_G	390_M	1.066	1.00
4_I	25_A	1.063	1.00
328_Y	331_K	1.059	1.00
225_A	252_V	1.058	1.00
213_V	223_T	1.050	1.00
378_R	386_G	1.043	1.00
110_T	118_Q	1.043	1.00
386_G	389_D	1.042	1.00
295_T	300_I	1.038	1.00
63_I	67_E	1.037	1.00
203_G	207_R	1.036	1.00
43_T	372_E	1.035	1.00
23_V	255_D	1.034	1.00
61_T	428_N	1.029	1.00
103_P	111_A	1.024	1.00
230_I	257_V	1.022	1.00
297_W	301_A	1.022	1.00
16_R	216_V	1.020	1.00
7_G	223_T	1.020	1.00
308_A	311_E	1.016	1.00
401_H	404_V	1.012	1.00
354_S	358_A	1.006	1.00
347_E	350_E	1.004	1.00
265_V	268_S	1.001	1.00
311_E	314_N	0.999	1.00
210_D	213_V	0.996	1.00
355_G	358_A	0.995	1.00
106_S	109_D	0.992	1.00
232_R	239_T	0.989	1.00
112_R	116_L	0.989	1.00
41_H	50_A	0.984	1.00
207_R	211_A	0.984	1.00
76_R	202_D	0.983	1.00
18_L	431_A	0.983	1.00
353_L	357_E	0.982	1.00
405_Y	433_R	0.977	1.00
350_E	364_D	0.972	1.00
9_I	38_A	0.964	1.00
64_D	67_E	0.962	1.00
297_W	300_I	0.961	1.00
295_T	298_L	0.952	1.00
405_Y	434_I	0.947	1.00
328_Y	334_Q	0.947	1.00
263_P	410_A	0.944	1.00
209_L	213_V	0.941	1.00
304_A	358_A	0.933	1.00
230_I	241_V	0.932	1.00
102_F	110_T	0.930	1.00
161_E	172_M	0.926	1.00
101_A	110_T	0.923	1.00
428_N	432_D	0.921	1.00
118_Q	121_D	0.919	1.00
15_A	216_V	0.918	1.00
295_T	299_N	0.914	1.00
383_Y	387_Y	0.914	1.00
233_D	239_T	0.909	1.00
105_L	110_T	0.906	1.00
331_K	334_Q	0.900	1.00
230_I	259_V	0.898	1.00
62_I	424_I	0.895	1.00
329_V	333_V	0.893	1.00
291_A	294_D	0.891	1.00
326_L	329_V	0.891	1.00
408_G	426_A	0.890	1.00
65_R	69_L	0.890	1.00
89_T	155_V	0.888	1.00
368_V	376_N	0.888	1.00
16_R	68_E	0.883	1.00
80_G	83_A	0.882	1.00
17_R	68_E	0.878	1.00
14_A	427_G	0.878	1.00
378_R	382_V	0.877	1.00
227_V	243_V	0.877	1.00
109_D	113_L	0.875	1.00
388_L	391_V	0.873	1.00
111_A	114_A	0.872	1.00
347_E	351_H	0.870	1.00
17_R	21_H	0.869	1.00
357_E	365_R	0.866	1.00
271_G	274_C	0.866	1.00
233_D	240_G	0.865	1.00
259_V	404_V	0.865	1.00
383_Y	389_D	0.864	1.00
31_S	39_A	0.863	1.00
73_D	77_W	0.863	1.00
10_A	423_G	0.853	1.00
232_R	403_G	0.851	1.00
37_L	51_F	0.850	1.00
146_F	150_H	0.850	1.00
108_Y	117_T	0.845	1.00
79_I	82_N	0.840	1.00
105_L	109_D	0.837	1.00
13_S	427_G	0.837	1.00
148_C	153_R	0.836	1.00
349_R	352_W	0.835	1.00
232_R	401_H	0.834	1.00
146_F	177_A	0.832	1.00
100_L	104_H	0.832	1.00
296_Y	299_N	0.829	1.00
287_S	370_W	0.829	1.00
40_T	206_G	0.827	1.00
113_L	117_T	0.823	1.00
256_G	403_G	0.823	1.00
66_I	71_L	0.820	1.00
103_P	113_L	0.819	1.00
384_E	388_L	0.817	1.00
115_M	119_E	0.814	1.00
20_Q	215_D	0.813	1.00
215_D	218_R	0.812	1.00
141_V	146_F	0.808	1.00
100_L	107_L	0.806	1.00
100_L	110_T	0.805	1.00
111_A	118_Q	0.802	1.00
116_L	119_E	0.801	1.00
113_L	116_L	0.800	1.00
261_A	269_L	0.798	1.00
107_L	114_A	0.798	1.00
384_E	389_D	0.794	1.00
391_V	395_D	0.794	1.00
9_I	423_G	0.794	1.00
59_E	421_N	0.794	1.00
380_A	383_Y	0.794	1.00
43_T	370_W	0.793	1.00
66_I	69_L	0.792	1.00
228_T	245_S	0.791	1.00
46_D	321_Y	0.790	1.00
354_S	357_E	0.789	1.00
98_E	101_A	0.789	1.00
356_I	363_F	0.788	1.00
307_G	312_H	0.787	1.00
384_E	387_Y	0.784	1.00
382_V	386_G	0.784	1.00
107_L	118_Q	0.781	1.00
13_S	17_R	0.781	1.00
305_P	355_G	0.777	1.00
102_F	105_L	0.776	1.00
102_F	106_S	0.776	1.00
168_F	175_V	0.775	1.00
57_A	60_E	0.773	1.00
9_I	13_S	0.772	1.00
73_D	76_R	0.768	1.00
423_G	427_G	0.763	1.00
114_A	117_T	0.762	1.00
153_R	156_Y	0.762	1.00
240_G	243_V	0.760	1.00
101_A	104_H	0.760	1.00
154_G	158_Q	0.759	1.00
239_T	257_V	0.759	1.00
354_S	364_D	0.758	1.00
65_R	424_I	0.754	1.00
379_T	384_E	0.752	1.00
327_L	331_K	0.751	1.00
385_R	389_D	0.751	1.00
380_A	384_E	0.749	1.00
113_L	120_L	0.747	1.00
271_G	275_D	0.745	1.00
241_V	257_V	0.744	1.00
387_Y	390_M	0.742	1.00
82_N	88_G	0.741	1.00
104_H	108_Y	0.741	1.00
356_I	360_F	0.740	1.00
407_A	427_G	0.739	1.00
383_Y	386_G	0.736	1.00
101_A	106_S	0.735	1.00
263_P	267_E	0.733	1.00
372_E	376_N	0.730	1.00
346_E	349_R	0.730	1.00
286_V	368_V	0.728	1.00
9_I	209_L	0.728	1.00
49_E	205_F	0.727	1.00
22_G	25_A	0.726	1.00
12_L	209_L	0.725	1.00
19_Q	220_H	0.725	1.00
320_R	324_E	0.724	1.00
103_P	114_A	0.722	1.00
104_H	111_A	0.720	1.00
38_A	52_Y	0.716	1.00
331_K	352_W	0.716	1.00
369_N	373_T	0.715	1.00
353_L	368_V	0.714	1.00
326_L	332_Y	0.712	1.00
16_R	219_E	0.711	1.00
172_M	175_V	0.709	1.00
5_V	227_V	0.708	1.00
116_L	120_L	0.707	1.00
257_V	403_G	0.706	1.00
430_A	434_I	0.705	1.00
169_G	281_T	0.705	1.00
28_F	241_V	0.705	1.00
83_A	86_V	0.703	1.00
201_L	207_R	0.701	1.00
166_A	169_G	0.699	1.00
348_V	373_T	0.698	1.00
165_E	171_R	0.697	1.00
378_R	384_E	0.697	1.00
108_Y	112_R	0.696	1.00
151_T	160_F	0.695	1.00
111_A	115_M	0.694	1.00
425_V	429_E	0.694	1.00
157_E	161_E	0.693	1.00
20_Q	219_E	0.693	1.00
308_A	312_H	0.693	1.00
21_H	432_D	0.690	1.00
4_I	11_G	0.690	1.00
12_L	216_V	0.689	1.00
228_T	231_Q	0.688	1.00
85_Y	90_V	0.687	1.00
329_V	332_Y	0.686	1.00
85_Y	89_T	0.685	1.00
350_E	371_V	0.684	1.00
387_Y	391_V	0.683	1.00
282_V	285_I	0.681	1.00
373_T	377_P	0.681	1.00
110_T	116_L	0.680	1.00
355_G	359_L	0.680	1.00
349_R	373_T	0.680	1.00
29_E	223_T	0.679	1.00
110_T	115_M	0.679	1.00
105_L	111_A	0.678	1.00
383_Y	388_L	0.677	1.00
110_T	117_T	0.676	1.00
67_E	70_G	0.675	1.00
256_G	259_V	0.675	1.00
306_F	312_H	0.674	1.00
154_G	157_E	0.673	1.00
69_L	212_L	0.673	1.00
41_H	372_E	0.672	1.00
267_E	274_C	0.671	1.00
100_L	106_S	0.669	1.00
99_I	107_L	0.669	1.00
232_R	240_G	0.668	1.00
310_I	315_F	0.659	1.00
79_I	84_Y	0.659	1.00
386_G	392_V	0.658	1.00
296_Y	301_A	0.658	1.00
61_T	425_V	0.653	1.00
105_L	108_Y	0.653	1.00
63_I	199_G	0.651	1.00
13_S	212_L	0.651	1.00
371_V	376_N	0.649	1.00
9_I	424_I	0.648	1.00
46_D	324_E	0.647	1.00
108_Y	113_L	0.647	1.00
108_Y	115_M	0.646	1.00
52_Y	56_S	0.646	1.00
287_S	369_N	0.645	1.00
307_G	311_E	0.643	1.00
239_T	243_V	0.642	1.00
228_T	243_V	0.642	1.00
265_V	269_L	0.641	1.00
306_F	309_L	0.641	1.00
214_E	218_R	0.640	1.00
148_C	173_D	0.639	1.00
115_M	121_D	0.638	1.00
106_S	117_T	0.637	1.00
99_I	103_P	0.636	1.00
44_A	370_W	0.636	1.00
19_Q	217_G	0.635	1.00
258_I	430_A	0.635	1.00
66_I	201_L	0.635	1.00
84_Y	90_V	0.635	1.00
399_E	406_Y	0.633	1.00
100_L	118_Q	0.633	1.00
357_E	363_F	0.633	1.00
108_Y	119_E	0.631	1.00
108_Y	114_A	0.631	1.00
431_A	434_I	0.629	1.00
305_P	308_A	0.628	1.00
369_N	372_E	0.627	1.00
388_L	392_V	0.625	1.00
72_G	75_L	0.624	1.00
370_W	376_N	0.624	1.00
4_I	258_I	0.624	1.00
378_R	389_D	0.623	1.00
143_V	180_L	0.621	1.00
264_T	268_S	0.620	1.00
282_V	375_R	0.620	1.00
306_F	311_E	0.620	1.00
259_V	406_Y	0.619	1.00
106_S	113_L	0.618	1.00
378_R	383_Y	0.617	1.00
389_D	392_V	0.617	1.00
382_V	390_M	0.613	1.00
109_D	117_T	0.613	1.00
84_Y	88_G	0.612	1.00
101_A	117_T	0.612	1.00
211_A	215_D	0.612	1.00
52_Y	205_F	0.611	1.00
54_H	167_K	0.611	1.00
49_E	54_H	0.610	1.00
341_W	345_D	0.607	1.00
82_N	85_Y	0.607	1.00
62_I	420_L	0.607	1.00
4_I	8_G	0.605	1.00
326_L	330_P	0.602	1.00
233_D	236_G	0.601	1.00
81_K	86_V	0.600	1.00
390_M	393_P	0.600	1.00
288_M	292_L	0.600	1.00
12_L	27_V	0.599	1.00
103_P	118_Q	0.598	1.00
115_M	118_Q	0.597	1.00
368_V	374_N	0.597	1.00
114_A	120_L	0.596	1.00
390_M	394_Y	0.596	1.00
107_L	115_M	0.596	1.00
299_N	302_D	0.595	1.00
14_A	430_A	0.594	1.00
23_V	256_G	0.593	1.00
106_S	118_Q	0.593	1.00
288_M	293_T	0.591	1.00
327_L	330_P	0.590	1.00
329_V	334_Q	0.589	1.00
79_I	83_A	0.589	1.00
106_S	114_A	0.588	1.00
261_A	265_V	0.588	1.00
258_I	405_Y	0.586	1.00
158_Q	162_P	0.582	1.00
107_L	121_D	0.582	1.00
145_Q	148_C	0.579	1.00
170_S	174_D	0.578	1.00
326_L	334_Q	0.578	1.00
382_V	388_L	0.577	1.00
399_E	402_D	0.575	1.00
109_D	116_L	0.574	1.00
388_L	394_Y	0.573	1.00
216_V	219_E	0.573	1.00
381_P	386_G	0.573	1.00
25_A	216_V	0.571	1.00
304_A	355_G	0.571	1.00
52_Y	420_L	0.571	1.00
295_T	301_A	0.570	1.00
386_G	394_Y	0.570	1.00
104_H	117_T	0.569	1.00
107_L	113_L	0.568	1.00
139_E	142_G	0.568	1.00
340_V	344_S	0.567	1.00
297_W	302_D	0.567	1.00
101_A	105_L	0.567	1.00
99_I	104_H	0.566	1.00
38_A	420_L	0.565	1.00
103_P	121_D	0.564	1.00
33_T	206_G	0.562	1.00
134_D	137_D	0.562	1.00
398_S	433_R	0.562	1.00
372_E	375_R	0.562	1.00
345_D	349_R	0.561	1.00
389_D	394_Y	0.561	1.00
16_R	69_L	0.559	1.00
272_Y	276_I	0.559	1.00
286_V	371_V	0.558	1.00
81_K	85_Y	0.557	1.00
385_R	390_M	0.556	1.00
8_G	11_G	0.554	1.00
163_L	166_A	0.554	1.00
231_Q	239_T	0.554	1.00
3_A	257_V	0.552	1.00
353_L	371_V	0.552	1.00
213_V	216_V	0.551	1.00
103_P	120_L	0.549	1.00
103_P	109_D	0.548	1.00
242_T	249_T	0.548	1.00
63_I	73_D	0.547	1.00
351_H	355_G	0.547	1.00
110_T	121_D	0.545	0.99
81_K	84_Y	0.545	0.99
367_S	376_N	0.545	0.99
232_R	404_V	0.544	0.99
381_P	389_D	0.544	0.99
382_V	385_R	0.543	0.99
429_E	432_D	0.542	0.99
262_M	410_A	0.542	0.99
38_A	205_F	0.541	0.99
379_T	386_G	0.541	0.99
104_H	109_D	0.540	0.99
3_A	255_D	0.540	0.99
52_Y	421_N	0.540	0.99
350_E	353_L	0.539	0.99
360_F	363_F	0.538	0.99
113_L	118_Q	0.536	0.99
63_I	66_I	0.536	0.99
312_H	315_F	0.536	0.99
80_G	84_Y	0.531	0.99
255_D	403_G	0.530	0.99
200_Y	205_F	0.528	0.99
83_A	90_V	0.527	0.99
313_T	325_H	0.527	0.99
56_S	198_L	0.527	0.99
101_A	111_A	0.522	0.99
102_F	108_Y	0.521	0.99
79_I	85_Y	0.521	0.99
43_T	48_I	0.520	0.99
345_D	373_T	0.517	0.99
286_V	329_V	0.516	0.99
104_H	113_L	0.516	0.99
368_V	372_E	0.515	0.99
320_R	323_G	0.515	0.99
296_Y	302_D	0.513	0.99
381_P	387_Y	0.512	0.99
133_E	136_T	0.511	0.99
86_V	89_T	0.510	0.99
101_A	109_D	0.510	0.99
113_L	119_E	0.509	0.99
40_T	49_E	0.509	0.99
32_A	39_A	0.507	0.99
311_E	360_F	0.507	0.99
7_G	29_E	0.506	0.99
49_E	206_G	0.505	0.99
162_P	165_E	0.505	0.99
386_G	391_V	0.505	0.99
329_V	356_I	0.505	0.99
7_G	12_L	0.505	0.99
266_L	269_L	0.504	0.99
17_R	65_R	0.504	0.99
7_G	11_G	0.504	0.99
143_V	147_L	0.503	0.99
282_V	373_T	0.503	0.99
100_L	111_A	0.503	0.99
27_V	216_V	0.502	0.99
378_R	385_R	0.500	0.99
367_S	370_W	0.500	0.99

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4i59A	1	0.9566	100	0.323	Contact Map
2yg5A	2	0.9566	100	0.328	Contact Map
1sezA	3	0.9429	100	0.329	Contact Map
3i6dA	1	0.9018	100	0.329	Contact Map
2ivdA	1	0.9452	100	0.337	Contact Map
1s3eA	2	0.9589	100	0.339	Contact Map
3lovA	1	0.9475	100	0.351	Contact Map
4dsgA	1	0.9361	100	0.372	Contact Map
3nksA	2	0.9384	100	0.382	Contact Map
2vvmA	2	0.9406	100	0.382	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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