Q9HNZ2 - HALSA - GREMLIN Contacts

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Q9HNZ2 - Uncharacterized protein

UniProt:	Q9HNZ2	Sequences: MTAAADLILYNGDVHVLTDTATPADPAHSAVAIRDGRIVGLSNDYDAAFRADTGTREVDLGGRVVVPGFVDAHTHLAVLGKHGVHADLRGADSPAAATARLAERARETDAGWVLGFGYDDSQWSAALSTADLDAVSEARPVAAIREDMHTATVNGVALAEHGDEMPAADVGEDGRIVEDAVEAVYDATDPDLAGTRPLIEAAQREANERGVTAVHEMVRDSHAPRVYRELDAAGELSVRVRLNYWADHLDAVLETGLVTNHGGGMVTVGGIKTYTDGSLGGRTAKLSEPYADAPGETGQWVVDPSALAALVERADDAGLQVVAHAIGDAAVDAVLDAYEDAGERRHRIEHAELASDDAIERMADLGVVASVQPNFLKWAGSGGLYADRLGTARREASNRFADMLDAGVDVAFGSDCMPLAPLVGVHHAVTAPADAQRLSVTAALRAYTSGGARAGCREDEQGVIREGALADLTVLDASPWEHADAIADEVGVSMTVVDGAVVYDGR	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	506 (491)
Sequences:	4501 (3461)
Seq/√Len:	156.2

BACSU - YTCJ
HALSA - Q9HNZ2

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
439_S	442_A	4.203	1.00
401_A	405_D	4.189	1.00
156_V	159_A	3.717	1.00
463_V	468_A	3.537	1.00
31_V	464_I	3.534	1.00
402_D	436_Q	3.340	1.00
308_A	340_D	3.332	1.00
496_V	501_V	3.002	1.00
133_D	155_G	2.799	1.00
494_M	501_V	2.797	1.00
339_E	361_R	2.686	1.00
156_V	160_E	2.638	1.00
200_E	235_E	2.623	1.00
465_R	468_A	2.573	1.00
165_M	171_G	2.440	1.00
285_K	300_W	2.422	1.00
287_S	332_D	2.416	1.00
196_R	229_E	2.397	1.00
40_G	47_A	2.386	1.00
10_Y	57_E	2.378	1.00
28_H	41_L	2.369	1.00
207_N	502_V	2.331	1.00
336_D	361_R	2.312	1.00
9_L	60_L	2.253	1.00
60_L	474_V	2.244	1.00
63_R	493_S	2.241	1.00
477_A	486_I	2.238	1.00
8_I	51_A	2.215	1.00
390_G	393_R	2.207	1.00
38_I	464_I	2.204	1.00
440_V	480_W	2.190	1.00
18_T	465_R	2.180	1.00
136_S	141_V	2.175	1.00
142_A	151_A	2.175	1.00
345_R	458_E	2.150	1.00
449_S	463_V	2.104	1.00
43_N	46_D	2.069	1.00
11_N	59_D	2.062	1.00
29_S	44_D	2.056	1.00
287_S	355_S	2.050	1.00
12_G	60_L	2.024	1.00
426_H	488_D	2.018	1.00
477_A	490_V	1.998	1.00
469_L	498_D	1.993	1.00
360_E	406_A	1.981	1.00
66_V	475_L	1.977	1.00
323_A	338_Y	1.972	1.00
203_Q	237_S	1.967	1.00
339_E	364_D	1.966	1.00
472_L	496_V	1.935	1.00
401_A	442_A	1.929	1.00
311_V	321_V	1.919	1.00
68_G	212_T	1.899	1.00
13_D	478_S	1.884	1.00
34_R	39_V	1.869	1.00
476_D	491_G	1.850	1.00
66_V	473_T	1.837	1.00
315_D	346_H	1.835	1.00
207_N	237_S	1.826	1.00
332_D	358_A	1.812	1.00
192_L	229_E	1.801	1.00
285_K	329_A	1.794	1.00
457_R	461_Q	1.790	1.00
99_A	103_E	1.779	1.00
412_F	446_A	1.776	1.00
14_V	31_V	1.776	1.00
191_D	194_G	1.771	1.00
8_I	32_A	1.769	1.00
478_S	481_E	1.764	1.00
289_P	297_T	1.730	1.00
304_P	333_A	1.730	1.00
115_G	143_A	1.723	1.00
345_R	453_R	1.718	1.00
206_A	419_L	1.712	1.00
289_P	295_G	1.712	1.00
312_E	316_D	1.712	1.00
325_A	348_I	1.703	1.00
92_D	96_A	1.693	1.00
18_T	26_P	1.685	1.00
137_E	141_V	1.669	1.00
65_V	474_V	1.662	1.00
203_Q	207_N	1.660	1.00
167_A	170_V	1.660	1.00
362_M	369_A	1.658	1.00
18_T	25_D	1.645	1.00
335_L	367_V	1.644	1.00
37_R	460_E	1.626	1.00
445_R	449_S	1.600	1.00
79_L	416_C	1.596	1.00
151_A	181_V	1.593	1.00
237_S	500_A	1.589	1.00
158_L	176_I	1.589	1.00
36_G	498_D	1.585	1.00
33_I	472_L	1.584	1.00
409_D	450_G	1.580	1.00
52_D	55_T	1.580	1.00
8_I	47_A	1.572	1.00
153_V	157_A	1.568	1.00
155_G	159_A	1.558	1.00
103_E	107_E	1.555	1.00
70_V	213_A	1.545	1.00
359_I	406_A	1.542	1.00
360_E	364_D	1.529	1.00
164_E	167_A	1.525	1.00
205_E	208_E	1.524	1.00
93_S	96_A	1.517	1.00
231_D	263_G	1.515	1.00
104_R	108_T	1.515	1.00
129_T	155_G	1.514	1.00
102_A	106_R	1.503	1.00
31_V	65_V	1.496	1.00
209_R	420_A	1.495	1.00
304_P	308_A	1.490	1.00
303_D	306_A	1.487	1.00
293_A	296_E	1.479	1.00
31_V	472_L	1.478	1.00
404_L	442_A	1.457	1.00
165_M	172_E	1.455	1.00
9_L	496_V	1.455	1.00
426_H	430_T	1.455	1.00
105_A	139_R	1.453	1.00
69_F	422_L	1.451	1.00
91_A	100_R	1.448	1.00
479_P	490_V	1.442	1.00
414_S	424_G	1.428	1.00
95_A	99_A	1.425	1.00
60_L	65_V	1.417	1.00
129_T	171_G	1.416	1.00
286_L	353_L	1.412	1.00
91_A	97_A	1.409	1.00
486_I	489_E	1.408	1.00
453_R	458_E	1.395	1.00
29_S	43_N	1.391	1.00
32_A	39_V	1.382	1.00
479_P	487_A	1.364	1.00
9_L	472_L	1.364	1.00
66_V	69_F	1.362	1.00
72_A	411_A	1.362	1.00
70_V	451_G	1.360	1.00
483_A	486_I	1.352	1.00
325_A	331_V	1.346	1.00
90_G	100_R	1.346	1.00
243_N	270_G	1.341	1.00
449_S	468_A	1.329	1.00
32_A	55_T	1.329	1.00
275_T	334_V	1.327	1.00
40_G	46_D	1.317	1.00
323_A	334_V	1.317	1.00
176_I	184_V	1.315	1.00
213_A	461_Q	1.312	1.00
103_E	106_R	1.310	1.00
94_P	98_T	1.310	1.00
196_R	233_A	1.310	1.00
9_L	33_I	1.300	1.00
411_A	454_A	1.297	1.00
464_I	472_L	1.294	1.00
320_Q	456_C	1.292	1.00
13_D	27_A	1.289	1.00
228_R	232_A	1.289	1.00
15_H	480_W	1.288	1.00
98_T	134_A	1.282	1.00
422_L	475_L	1.279	1.00
94_P	131_D	1.271	1.00
356_D	399_R	1.267	1.00
7_L	496_V	1.266	1.00
105_A	113_V	1.261	1.00
111_G	139_R	1.260	1.00
429_V	440_V	1.256	1.00
368_V	453_R	1.251	1.00
110_A	139_R	1.248	1.00
409_D	453_R	1.247	1.00
229_E	233_A	1.246	1.00
441_T	480_W	1.242	1.00
128_S	131_D	1.240	1.00
332_D	355_S	1.232	1.00
108_T	111_G	1.230	1.00
50_R	55_T	1.223	1.00
64_V	479_P	1.220	1.00
10_Y	44_D	1.218	1.00
101_L	143_A	1.214	1.00
403_M	408_V	1.210	1.00
31_V	38_I	1.207	1.00
331_V	354_A	1.204	1.00
11_N	62_G	1.198	1.00
313_R	317_A	1.196	1.00
242_L	266_V	1.194	1.00
337_A	341_A	1.193	1.00
354_A	403_M	1.190	1.00
205_E	209_R	1.189	1.00
275_T	323_A	1.188	1.00
412_F	428_A	1.184	1.00
109_D	139_R	1.178	1.00
332_D	336_D	1.175	1.00
445_R	450_G	1.174	1.00
335_L	362_M	1.173	1.00
9_L	12_G	1.169	1.00
163_D	167_A	1.168	1.00
40_G	466_E	1.168	1.00
308_A	337_A	1.163	1.00
96_A	100_R	1.155	1.00
215_H	455_G	1.149	1.00
432_P	485_A	1.146	1.00
203_Q	238_V	1.146	1.00
368_V	454_A	1.144	1.00
94_P	125_A	1.139	1.00
355_S	358_A	1.133	1.00
96_A	99_A	1.130	1.00
41_L	466_E	1.130	1.00
438_L	442_A	1.126	1.00
80_G	202_A	1.120	1.00
209_R	419_L	1.120	1.00
256_G	260_N	1.116	1.00
404_L	438_L	1.114	1.00
239_R	471_D	1.113	1.00
81_K	198_L	1.110	1.00
339_E	365_L	1.109	1.00
9_L	58_V	1.108	1.00
369_A	408_V	1.106	1.00
329_A	333_A	1.104	0.99
10_Y	48_A	1.100	0.99
74_T	206_A	1.099	0.99
23_P	26_P	1.086	0.99
129_T	158_L	1.085	0.99
84_V	201_A	1.083	0.99
51_A	55_T	1.081	0.99
461_Q	469_L	1.073	0.99
440_V	484_D	1.073	0.99
362_M	408_V	1.069	0.99
36_G	469_L	1.067	0.99
108_T	139_R	1.066	0.99
256_G	259_T	1.066	0.99
16_V	28_H	1.062	0.99
65_V	472_L	1.062	0.99
412_F	438_L	1.061	0.99
98_T	131_D	1.057	0.99
153_V	161_H	1.054	0.99
349_E	370_S	1.052	0.99
140_P	154_N	1.045	0.99
13_D	64_V	1.043	0.99
239_R	498_D	1.043	0.99
217_M	349_E	1.041	0.99
41_L	464_I	1.037	0.99
482_H	490_V	1.037	0.99
422_L	473_T	1.034	0.99
138_A	154_N	1.033	0.99
265_M	497_V	1.033	0.99
12_G	65_V	1.033	0.99
343_E	456_C	1.032	0.99
70_V	461_Q	1.032	0.99
32_A	47_A	1.031	0.99
422_L	492_V	1.027	0.99
105_A	135_V	1.022	0.99
425_V	440_V	1.020	0.99
30_A	42_S	1.019	0.99
37_R	469_L	1.016	0.99
334_V	338_Y	1.015	0.99
100_R	103_E	1.014	0.99
14_V	28_H	1.012	0.99
32_A	40_G	1.011	0.99
430_T	484_D	1.008	0.99
31_V	496_V	1.007	0.99
14_V	65_V	1.003	0.99
308_A	312_E	1.002	0.99
460_E	469_L	1.001	0.99
251_A	254_E	1.000	0.99
282_R	292_D	0.999	0.99
444_L	479_P	0.998	0.99
83_G	205_E	0.998	0.99
44_D	48_A	0.995	0.99
334_V	348_I	0.991	0.99
204_R	237_S	0.986	0.99
48_A	57_E	0.985	0.99
149_H	178_E	0.983	0.99
142_A	153_V	0.983	0.99
104_R	107_E	0.979	0.99
213_A	455_G	0.976	0.99
133_D	154_N	0.973	0.99
129_T	133_D	0.973	0.99
130_A	134_A	0.970	0.99
306_A	309_A	0.969	0.99
15_H	64_V	0.968	0.99
482_H	487_A	0.965	0.99
351_A	354_A	0.965	0.99
335_L	361_R	0.962	0.99
287_S	329_A	0.958	0.99
315_D	344_R	0.957	0.99
434_D	437_R	0.957	0.99
32_A	52_D	0.954	0.99
405_D	442_A	0.952	0.98
311_V	337_A	0.951	0.98
351_A	362_M	0.950	0.98
48_A	51_A	0.949	0.98
72_A	451_G	0.948	0.98
112_W	157_A	0.944	0.98
101_L	136_S	0.943	0.98
474_V	494_M	0.942	0.98
356_D	396_A	0.940	0.98
373_P	412_F	0.929	0.98
475_L	479_P	0.928	0.98
196_R	230_L	0.924	0.98
7_L	56_R	0.922	0.98
12_G	62_G	0.922	0.98
309_A	313_R	0.921	0.98
313_R	316_D	0.921	0.98
17_L	444_L	0.921	0.98
230_L	235_E	0.921	0.98
386_A	391_T	0.917	0.98
457_R	460_E	0.916	0.98
311_V	341_A	0.914	0.98
314_A	321_V	0.914	0.98
285_K	333_A	0.914	0.98
420_A	423_V	0.914	0.98
265_M	498_D	0.911	0.98
370_S	375_F	0.911	0.98
17_L	441_T	0.910	0.98
477_A	482_H	0.905	0.98
422_L	425_V	0.901	0.98
9_L	65_V	0.900	0.98
136_S	139_R	0.900	0.98
250_D	313_R	0.898	0.98
140_P	157_A	0.898	0.98
372_Q	413_G	0.895	0.98
389_L	393_R	0.895	0.98
217_M	243_N	0.894	0.98
27_A	480_W	0.890	0.98
425_V	447_Y	0.885	0.98
304_P	336_D	0.881	0.98
484_D	487_A	0.881	0.98
286_L	389_L	0.880	0.97
130_A	171_G	0.880	0.97
214_V	238_V	0.877	0.97
345_R	456_C	0.876	0.97
473_T	492_V	0.875	0.97
446_A	450_G	0.872	0.97
39_V	466_E	0.869	0.97
476_D	493_S	0.869	0.97
9_L	31_V	0.867	0.97
497_V	502_V	0.867	0.97
476_D	490_V	0.865	0.97
401_A	404_L	0.864	0.97
98_T	101_L	0.863	0.97
160_E	187_A	0.862	0.97
99_A	102_A	0.860	0.97
153_V	176_I	0.860	0.97
275_T	330_A	0.859	0.97
371_V	400_F	0.859	0.97
386_A	394_R	0.857	0.97
411_A	450_G	0.855	0.97
322_V	347_R	0.855	0.97
225_R	229_E	0.854	0.97
371_V	403_M	0.850	0.97
271_I	314_A	0.850	0.97
33_I	496_V	0.849	0.97
214_V	240_V	0.846	0.97
70_V	455_G	0.846	0.97
229_E	232_A	0.841	0.97
66_V	444_L	0.839	0.97
424_G	447_Y	0.837	0.97
292_D	388_R	0.835	0.97
402_D	406_A	0.832	0.96
278_S	281_G	0.832	0.96
66_V	479_P	0.830	0.96
69_F	211_V	0.829	0.96
104_R	139_R	0.829	0.96
17_L	463_V	0.826	0.96
354_A	362_M	0.824	0.96
208_E	503_Y	0.824	0.96
147_D	150_T	0.823	0.96
440_V	479_P	0.821	0.96
108_T	113_V	0.819	0.96
297_T	329_A	0.817	0.96
18_T	24_A	0.813	0.96
98_T	135_V	0.812	0.96
82_H	148_M	0.812	0.96
351_A	369_A	0.811	0.96
300_W	333_A	0.810	0.96
308_A	341_A	0.809	0.96
285_K	297_T	0.808	0.96
475_L	490_V	0.808	0.96
370_S	413_G	0.806	0.96
352_E	398_N	0.805	0.96
288_E	393_R	0.801	0.96
110_A	138_A	0.801	0.96
42_S	47_A	0.801	0.96
359_I	403_M	0.801	0.96
239_R	497_V	0.800	0.96
322_V	349_E	0.800	0.96
192_L	196_R	0.796	0.95
257_L	260_N	0.796	0.95
153_V	158_L	0.795	0.95
207_N	238_V	0.791	0.95
83_G	201_A	0.790	0.95
201_A	204_R	0.790	0.95
51_A	57_E	0.789	0.95
145_R	280_G	0.787	0.95
105_A	136_S	0.787	0.95
158_L	172_E	0.785	0.95
207_N	497_V	0.781	0.95
7_L	58_V	0.781	0.95
333_A	336_D	0.780	0.95
118_Y	143_A	0.779	0.95
220_D	223_A	0.778	0.95
239_R	469_L	0.777	0.95
217_M	322_V	0.772	0.95
120_D	145_R	0.772	0.95
278_S	283_T	0.767	0.94
30_A	47_A	0.766	0.94
362_M	367_V	0.765	0.94
363_A	408_V	0.764	0.94
164_E	170_V	0.762	0.94
265_M	500_A	0.761	0.94
105_A	108_T	0.761	0.94
116_F	148_M	0.760	0.94
18_T	23_P	0.759	0.94
150_T	278_S	0.758	0.94
131_D	134_A	0.757	0.94
200_E	203_Q	0.757	0.94
438_L	443_A	0.756	0.94
196_R	200_E	0.755	0.94
332_D	361_R	0.755	0.94
84_V	197_P	0.753	0.94
47_A	50_R	0.752	0.94
328_D	393_R	0.752	0.94
195_T	223_A	0.751	0.94
363_A	406_A	0.750	0.94
18_T	28_H	0.749	0.94
475_L	492_V	0.749	0.94
79_L	205_E	0.747	0.94
401_A	436_Q	0.745	0.94
203_Q	236_L	0.744	0.94
337_A	340_D	0.742	0.93
428_A	443_A	0.741	0.93
29_S	42_S	0.740	0.93
438_L	446_A	0.739	0.93
88_L	115_G	0.739	0.93
336_D	339_E	0.737	0.93
149_H	324_H	0.734	0.93
308_A	333_A	0.732	0.93
392_A	395_E	0.729	0.93
135_V	141_V	0.727	0.93
11_N	60_L	0.727	0.93
161_H	187_A	0.725	0.93
272_K	276_D	0.725	0.93
396_A	402_D	0.723	0.93
194_G	197_P	0.722	0.92
44_D	47_A	0.721	0.92
136_S	154_N	0.721	0.92
147_D	281_G	0.720	0.92
483_A	487_A	0.720	0.92
158_L	163_D	0.719	0.92
312_E	341_A	0.718	0.92
13_D	481_E	0.718	0.92
326_I	352_E	0.718	0.92
95_A	98_T	0.715	0.92
132_L	136_S	0.715	0.92
26_P	465_R	0.715	0.92
80_G	201_A	0.713	0.92
273_T	310_L	0.712	0.92
320_Q	346_H	0.711	0.92
130_A	155_G	0.711	0.92
405_D	436_Q	0.710	0.92
404_L	410_V	0.708	0.92
279_L	352_E	0.708	0.92
410_V	438_L	0.707	0.92
422_L	490_V	0.707	0.92
42_S	45_Y	0.706	0.92
58_V	494_M	0.705	0.92
250_D	253_L	0.704	0.92
203_Q	230_L	0.704	0.92
444_L	480_W	0.703	0.91
102_A	134_A	0.703	0.91
411_A	451_G	0.702	0.91
354_A	399_R	0.700	0.91
221_S	225_R	0.697	0.91
440_V	482_H	0.696	0.91
400_F	410_V	0.696	0.91
137_E	156_V	0.696	0.91
395_E	435_A	0.694	0.91
356_D	402_D	0.694	0.91
352_E	375_F	0.693	0.91
426_H	485_A	0.692	0.91
150_T	281_G	0.691	0.91
353_L	389_L	0.690	0.91
211_V	421_P	0.689	0.91
275_T	307_L	0.689	0.91
84_V	198_L	0.688	0.91
98_T	128_S	0.685	0.90
25_D	28_H	0.684	0.90
363_A	407_G	0.681	0.90
222_H	225_R	0.681	0.90
182_E	185_Y	0.680	0.90
291_A	393_R	0.679	0.90
396_A	399_R	0.678	0.90
455_G	461_Q	0.678	0.90
200_E	204_R	0.675	0.90
63_R	476_D	0.675	0.90
46_D	49_F	0.675	0.90
282_R	388_R	0.670	0.89
326_I	372_Q	0.669	0.89
215_H	347_R	0.669	0.89
192_L	225_R	0.667	0.89
248_H	251_A	0.665	0.89
372_Q	375_F	0.664	0.89
78_V	148_M	0.662	0.89
241_R	269_G	0.660	0.89
267_T	457_R	0.660	0.89
274_Y	330_A	0.657	0.89
140_P	160_E	0.655	0.88
324_H	415_D	0.655	0.88
453_R	456_C	0.653	0.88
276_D	327_G	0.653	0.88
113_V	139_R	0.652	0.88
161_H	184_V	0.650	0.88
368_V	409_D	0.648	0.88
250_D	254_E	0.647	0.88
354_A	359_I	0.647	0.88
17_L	449_S	0.646	0.88
490_V	493_S	0.646	0.88
7_L	33_I	0.646	0.88
442_A	445_R	0.646	0.88
132_L	141_V	0.645	0.88
378_W	417_M	0.645	0.88
101_L	132_L	0.644	0.88
482_H	486_I	0.644	0.88
212_T	471_D	0.643	0.87
368_V	411_A	0.642	0.87
273_T	307_L	0.639	0.87
384_L	388_R	0.639	0.87
471_D	498_D	0.638	0.87
282_R	293_A	0.637	0.87
222_H	226_V	0.636	0.87
258_V	261_H	0.635	0.87
349_E	375_F	0.634	0.87
412_F	447_Y	0.633	0.87
192_L	226_V	0.631	0.86
390_G	394_R	0.631	0.86
257_L	261_H	0.629	0.86
331_V	351_A	0.628	0.86
64_V	490_V	0.628	0.86
178_E	272_K	0.628	0.86
373_P	424_G	0.626	0.86
86_A	104_R	0.624	0.86
95_A	125_A	0.623	0.86
284_A	326_I	0.623	0.86
217_M	270_G	0.622	0.86
8_I	44_D	0.619	0.85
31_V	501_V	0.617	0.85
399_R	402_D	0.617	0.85
66_V	425_V	0.616	0.85
163_D	172_E	0.616	0.85
280_G	326_I	0.612	0.85
472_L	501_V	0.612	0.85
147_D	375_F	0.610	0.85
91_A	96_A	0.610	0.85
307_L	337_A	0.609	0.84
15_H	27_A	0.608	0.84
209_R	418_P	0.607	0.84
197_P	200_E	0.607	0.84
199_I	226_V	0.606	0.84
331_V	362_M	0.606	0.84
95_A	134_A	0.606	0.84
321_V	346_H	0.606	0.84
279_L	326_I	0.604	0.84
200_E	230_L	0.604	0.84
304_P	337_A	0.604	0.84
150_T	175_R	0.604	0.84
180_A	183_A	0.602	0.84
196_R	226_V	0.601	0.84
347_R	370_S	0.601	0.84
348_I	362_M	0.601	0.84
277_G	327_G	0.598	0.83
262_G	267_T	0.598	0.83
138_A	156_V	0.598	0.83
331_V	358_A	0.597	0.83
426_H	432_P	0.597	0.83
95_A	124_S	0.596	0.83
101_L	113_V	0.593	0.83
404_L	450_G	0.591	0.83
347_R	454_A	0.591	0.83
331_V	348_I	0.591	0.83
362_M	403_M	0.588	0.82
371_V	410_V	0.587	0.82
231_D	236_L	0.587	0.82
289_P	393_R	0.585	0.82
173_D	177_V	0.584	0.82
305_S	309_A	0.583	0.82
276_D	330_A	0.582	0.82
97_A	152_T	0.582	0.82
495_T	503_Y	0.581	0.82
275_T	333_A	0.579	0.81
450_G	453_R	0.577	0.81
425_V	444_L	0.577	0.81
150_T	177_V	0.577	0.81
359_I	399_R	0.575	0.81
287_S	358_A	0.574	0.81
197_P	201_A	0.574	0.81
120_D	282_R	0.574	0.81
11_N	61_G	0.573	0.81
374_N	424_G	0.571	0.80
75_H	350_H	0.570	0.80
307_L	323_A	0.570	0.80
423_V	426_H	0.570	0.80
325_A	334_V	0.568	0.80
72_A	454_A	0.568	0.80
208_E	491_G	0.567	0.80
356_D	406_A	0.567	0.80
335_L	339_E	0.567	0.80
97_A	143_A	0.567	0.80
429_V	487_A	0.566	0.80
182_E	186_D	0.565	0.80
448_T	462_G	0.564	0.80
79_L	419_L	0.564	0.80
178_E	301_V	0.564	0.80
228_R	231_D	0.564	0.80
31_V	494_M	0.562	0.79
498_D	501_V	0.561	0.79
291_A	390_G	0.561	0.79
226_V	230_L	0.559	0.79
311_V	323_A	0.559	0.79
63_R	494_M	0.559	0.79
127_L	143_A	0.558	0.79
280_G	352_E	0.558	0.79
362_M	365_L	0.558	0.79
279_L	353_L	0.557	0.79
213_A	241_R	0.556	0.79
32_A	50_R	0.555	0.79
38_I	41_L	0.555	0.79
15_H	478_S	0.555	0.79
423_V	488_D	0.554	0.78
280_G	375_F	0.553	0.78
142_A	185_Y	0.552	0.78
267_T	270_G	0.552	0.78
30_A	45_Y	0.552	0.78
76_L	240_V	0.552	0.78
97_A	123_W	0.552	0.78
27_A	64_V	0.551	0.78
76_L	202_A	0.551	0.78
237_S	502_V	0.550	0.78
325_A	330_A	0.549	0.78
17_L	445_R	0.549	0.78
204_R	207_N	0.549	0.78
127_L	152_T	0.549	0.78
297_T	300_W	0.549	0.78
249_L	254_E	0.549	0.78
263_G	267_T	0.549	0.78
144_I	185_Y	0.548	0.78
216_E	219_R	0.547	0.78
243_N	322_V	0.547	0.78
94_P	97_A	0.547	0.78
280_G	398_N	0.547	0.78
239_R	245_W	0.546	0.77
153_V	184_V	0.546	0.77
87_D	90_G	0.546	0.77
284_A	290_Y	0.546	0.77
177_V	299_Q	0.545	0.77
15_H	445_R	0.544	0.77
382_G	386_A	0.543	0.77
377_K	427_H	0.543	0.77
104_R	113_V	0.543	0.77
145_R	375_F	0.542	0.77
145_R	150_T	0.541	0.77
361_R	365_L	0.540	0.77
104_R	111_G	0.539	0.77
286_L	393_R	0.538	0.76
14_V	464_I	0.538	0.76
30_A	43_N	0.536	0.76
338_Y	367_V	0.536	0.76
101_L	115_G	0.535	0.76
259_T	262_G	0.535	0.76
147_D	280_G	0.532	0.76
45_Y	48_A	0.532	0.76
203_Q	497_V	0.531	0.76
38_I	65_V	0.530	0.75
249_L	252_V	0.530	0.75
272_K	324_H	0.529	0.75
296_E	299_Q	0.528	0.75
204_R	208_E	0.527	0.75
113_V	141_V	0.527	0.75
438_L	450_G	0.527	0.75
149_H	272_K	0.526	0.75
245_W	274_Y	0.524	0.75
272_K	431_A	0.523	0.74
255_T	258_V	0.523	0.74
332_D	357_D	0.522	0.74
391_T	395_E	0.522	0.74
322_V	375_F	0.521	0.74
118_Y	145_R	0.521	0.74
145_R	152_T	0.521	0.74
487_A	490_V	0.520	0.74
115_G	141_V	0.520	0.74
440_V	481_E	0.519	0.74
165_M	170_V	0.519	0.74
494_M	498_D	0.519	0.74
264_G	460_E	0.519	0.74
76_L	227_Y	0.518	0.74
16_V	26_P	0.517	0.74
32_A	42_S	0.516	0.73
26_P	445_R	0.516	0.73
472_L	494_M	0.514	0.73
78_V	116_F	0.514	0.73
386_A	390_G	0.513	0.73
94_P	152_T	0.513	0.73
326_I	398_N	0.512	0.73
320_Q	343_E	0.511	0.73
287_S	328_D	0.511	0.73
331_V	352_E	0.510	0.73
193_A	197_P	0.510	0.73
243_N	319_L	0.510	0.73
217_M	347_R	0.509	0.72
375_F	412_F	0.509	0.72
243_N	414_S	0.509	0.72
338_Y	346_H	0.509	0.72
85_H	114_L	0.508	0.72
206_A	211_V	0.508	0.72
76_L	203_Q	0.508	0.72
333_A	337_A	0.507	0.72
132_L	137_E	0.506	0.72
361_R	364_D	0.505	0.72
76_L	214_V	0.504	0.72
147_D	326_I	0.504	0.72
192_L	222_H	0.504	0.72
430_T	485_A	0.503	0.72
479_P	482_H	0.503	0.72
374_N	377_K	0.503	0.72
29_S	47_A	0.503	0.72
137_E	154_N	0.503	0.72
375_F	385_Y	0.503	0.72
232_A	235_E	0.502	0.71
92_D	124_S	0.502	0.71
336_D	365_L	0.502	0.71
277_G	330_A	0.502	0.71
64_V	478_S	0.502	0.71
477_A	489_E	0.501	0.71
248_H	253_L	0.500	0.71
196_R	235_E	0.500	0.71
352_E	385_Y	0.500	0.71

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3icjA	1	0.9051	100	0.358	Contact Map
2bb0A	2	0.7708	100	0.612	Contact Map
4gbdA	2	0.749	100	0.632	Contact Map
3lnpA	2	0.751	100	0.633	Contact Map
4v1xA	5	0.7609	100	0.638	Contact Map
4dzhA	2	0.7569	100	0.638	Contact Map
2q09A	2	0.7628	100	0.639	Contact Map
2p9bA	1	0.6996	100	0.639	Contact Map
4f0rA	2	0.749	100	0.64	Contact Map
3mkvA	5	0.7292	100	0.644	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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