GREMLIN Database
NADB - L-aspartate oxidase
UniProt: Q9HNZ0 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 509 (483)
Sequences: 5643 (2942)
Seq/√Len: 133.9

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
343_D347_R4.2551.00
10_L168_A4.2031.00
7_T33_L3.4351.00
155_A218_M3.4221.00
81_D85_G3.2331.00
260_N264_E3.2091.00
75_A80_V3.1251.00
264_E269_D3.0621.00
21_A192_V2.9591.00
431_V480_A2.8471.00
437_G487_P2.7931.00
451_K477_L2.6941.00
83_L364_V2.6911.00
260_N289_E2.6631.00
430_H442_R2.5731.00
265_R275_E2.5481.00
140_H143_A2.5291.00
354_F388_T2.5161.00
31_S148_D2.5001.00
247_V251_V2.4891.00
86_D384_R2.4471.00
150_L186_V2.4301.00
444_Q480_A2.4181.00
16_I378_G2.3961.00
268_P274_A2.3571.00
437_G441_Q2.3501.00
422_R446_V2.3411.00
487_P498_E2.3091.00
12_L168_A2.3011.00
21_A356_V2.2461.00
6_T187_F2.2451.00
436_T496_S2.2431.00
173_N176_T2.2081.00
220_A478_L2.1961.00
33_L150_L2.1931.00
157_D221_L2.1611.00
35_A170_L2.1541.00
25_A389_A2.1351.00
441_Q484_G2.1301.00
82_A384_R2.1281.00
132_H135_G2.0951.00
431_V443_A2.0811.00
355_A359_C2.0801.00
238_A332_C2.0721.00
16_I46_T2.0621.00
448_R477_L2.0541.00
8_D189_G2.0351.00
219_A340_V2.0311.00
340_V359_C2.0291.00
313_A317_A2.0231.00
225_D341_A2.0141.00
216_V226_V2.0061.00
436_T439_D1.9951.00
347_R388_T1.9931.00
225_D349_S1.9821.00
25_A386_G1.9781.00
62_S119_A1.9721.00
259_R326_G1.9711.00
170_L186_V1.9651.00
193_L359_C1.9591.00
286_V296_V1.9281.00
192_V389_A1.9151.00
83_L381_W1.9061.00
301_S326_G1.8941.00
447_L480_A1.8121.00
426_V443_A1.8021.00
427_M431_V1.7651.00
259_R301_S1.7611.00
257_L265_R1.7471.00
195_T215_G1.7461.00
198_I336_L1.7371.00
431_V440_L1.7361.00
79_A344_T1.7211.00
193_L340_V1.7141.00
46_T134_L1.7111.00
348_T355_A1.7031.00
444_Q477_L1.6981.00
33_L186_V1.6901.00
90_A93_D1.6881.00
64_K81_D1.6881.00
422_R453_E1.6851.00
219_A224_A1.6761.00
345_V388_T1.6731.00
7_T10_L1.6331.00
306_A313_A1.6301.00
164_A352_R1.6271.00
71_G75_A1.6161.00
56_T60_P1.6131.00
77_P81_D1.6031.00
346_G385_A1.6031.00
226_V229_A1.5841.00
163_G351_D1.5831.00
7_T148_D1.5791.00
72_D501_A1.5781.00
9_V25_A1.5661.00
37_K214_D1.5661.00
221_L471_N1.5571.00
60_P85_G1.5451.00
251_V256_A1.5261.00
426_V446_V1.5251.00
37_K212_T1.5221.00
173_N184_V1.5221.00
64_K68_L1.5211.00
385_A389_A1.5161.00
141_L149_M1.5101.00
414_G453_E1.5001.00
201_L479_I1.5001.00
423_L447_L1.4861.00
444_Q481_R1.4851.00
60_P64_K1.4751.00
451_K474_V1.4691.00
17_A356_V1.4651.00
443_A480_A1.4651.00
165_V191_T1.4561.00
24_A387_E1.4561.00
79_A83_L1.4301.00
90_A383_L1.4271.00
386_G390_A1.4261.00
288_A292_A1.4261.00
7_T31_S1.4171.00
437_G495_R1.4061.00
192_V356_V1.3971.00
342_V360_A1.3971.00
446_V449_R1.3971.00
265_R268_P1.3961.00
43_D48_W1.3931.00
159_I185_P1.3901.00
430_H439_D1.3861.00
287_A291_D1.3861.00
92_E98_T1.3861.00
46_T378_G1.3801.00
430_H443_A1.3791.00
12_L193_L1.3781.00
190_S392_D1.3761.00
150_L153_A1.3751.00
300_V303_L1.3701.00
193_L219_A1.3591.00
19_C141_L1.3551.00
477_L481_R1.3281.00
437_G484_G1.3271.00
227_T341_A1.3221.00
444_Q484_G1.3181.00
164_A351_D1.3171.00
86_D89_A1.3121.00
158_L165_V1.3121.00
425_R429_E1.3081.00
155_A168_A1.3041.00
227_T361_R1.2981.00
188_A191_T1.2981.00
206_T238_A1.2971.00
337_C492_C1.2961.00
199_G333_E1.2831.00
153_A170_L1.2791.00
248_S251_V1.2781.00
248_S312_L1.2761.00
382_G386_G1.2731.00
141_L147_V1.2711.00
60_P84_V1.2641.00
37_K468_Q1.2601.00
35_A168_A1.2601.00
203_R425_R1.2581.00
198_I232_V1.2551.00
354_F392_D1.2501.00
155_A170_L1.2481.00
202_Y431_V1.2431.00
431_V479_I1.2351.00
437_G498_E1.2331.00
53_I133_I1.2301.00
214_D471_N1.2261.00
101_V133_I1.2241.00
64_K84_V1.2211.00
305_F313_A1.2201.00
7_T150_L1.2111.00
53_I91_V1.2091.00
87_A376_L1.2081.00
86_D90_A1.2041.00
193_L353_L1.2021.00
9_V192_V1.1991.00
61_E65_R1.1981.00
82_A344_T1.1971.00
388_T392_D1.1930.99
430_H446_V1.1780.99
65_R69_A1.1780.99
284_R494_H1.1700.99
139_R143_A1.1680.99
79_A364_V1.1660.99
8_D31_S1.1640.99
258_L329_V1.1620.99
101_V132_H1.1580.99
20_G24_A1.1560.99
388_T391_G1.1470.99
12_L155_A1.1440.99
383_L387_E1.1420.99
441_Q445_G1.1410.99
483_A493_H1.1380.99
54_A372_S1.1340.99
389_A393_D1.1320.99
142_D151_E1.1300.99
34_V149_M1.1250.99
159_I169_L1.1200.99
153_A184_V1.1160.99
21_A389_A1.1120.99
61_E81_D1.1070.99
342_V355_A1.1050.99
194_A356_V1.1010.99
340_V355_A1.1010.99
63_L373_T1.0980.99
19_C34_V1.0970.99
306_A317_A1.0970.99
82_A86_D1.0960.99
216_V336_L1.0880.99
93_D383_L1.0800.99
441_Q444_Q1.0800.99
122_I372_S1.0790.99
24_A383_L1.0780.99
198_I479_I1.0760.99
78_E344_T1.0680.99
21_A385_A1.0660.99
109_F123_L1.0570.99
14_S36_T1.0570.99
230_E486_N1.0570.99
190_S393_D1.0560.99
221_L474_V1.0560.99
426_V430_H1.0550.99
10_L35_A1.0550.99
104_D124_H1.0550.99
24_A386_G1.0520.99
64_K77_P1.0510.99
10_L188_A1.0500.99
117_H372_S1.0460.99
34_V141_L1.0440.99
356_V385_A1.0430.99
62_S118_S1.0380.99
153_A173_N1.0300.98
364_V381_W1.0290.98
216_V475_V1.0280.98
421_R425_R1.0250.98
224_A353_L1.0240.98
54_A117_H1.0220.98
101_V136_P1.0210.98
157_D218_M1.0200.98
386_G389_A1.0200.98
257_L275_E1.0190.98
82_A381_W1.0170.98
131_H135_G1.0160.98
259_R299_D1.0150.98
74_E490_A1.0150.98
88_A92_E1.0120.98
314_E318_D1.0070.98
23_L141_L1.0030.98
420_F424_R1.0020.98
289_E292_A1.0010.98
270_Y285_A1.0010.98
315_A318_D0.9950.98
420_F472_A0.9930.98
297_R326_G0.9890.98
10_L33_L0.9870.98
128_A311_G0.9830.98
161_D166_T0.9740.98
490_A498_E0.9730.98
154_A467_Y0.9720.98
224_A350_L0.9710.98
448_R481_R0.9690.98
138_L149_M0.9680.98
63_L67_I0.9680.98
321_V325_T0.9640.98
266_F275_E0.9630.98
116_A337_C0.9620.98
266_F286_V0.9610.98
423_L469_L0.9590.98
442_R446_V0.9570.98
120_A254_E0.9570.98
11_V32_V0.9550.98
24_A93_D0.9540.98
9_V389_A0.9500.97
390_A393_D0.9480.97
169_L185_P0.9450.97
99_L140_H0.9440.97
26_A146_N0.9420.97
254_E308_E0.9410.97
435_R483_A0.9400.97
56_T84_V0.9390.97
203_R428_D0.9360.97
64_K80_V0.9360.97
67_I373_T0.9350.97
446_V450_L0.9290.97
289_E294_G0.9290.97
316_C323_W0.9270.97
434_R496_S0.9270.97
420_F469_L0.9250.97
102_P132_H0.9180.97
454_V473_A0.9180.97
270_Y289_E0.9170.97
41_P138_L0.9140.97
189_G393_D0.9140.97
83_L376_L0.9130.97
161_D164_A0.9120.97
190_S354_F0.9120.97
9_V30_A0.9120.97
490_A499_A0.9100.97
160_T165_V0.9090.97
24_A27_R0.9070.97
154_A468_Q0.9070.97
10_L186_V0.9060.97
68_L75_A0.9050.97
22_A147_V0.9020.97
426_V450_L0.8960.96
23_L99_L0.8950.96
277_A282_V0.8920.96
158_L191_T0.8870.96
285_A288_A0.8830.96
257_L302_P0.8820.96
93_D99_L0.8800.96
80_V84_V0.8770.96
218_M221_L0.8750.96
256_A300_V0.8740.96
342_V362_T0.8710.96
347_R392_D0.8710.96
190_S352_R0.8710.96
9_V29_G0.8700.96
47_D131_H0.8670.96
90_A379_L0.8660.96
269_D292_A0.8650.96
26_A147_V0.8650.96
25_A30_A0.8630.96
113_R120_A0.8610.95
89_A92_E0.8600.95
270_Y288_A0.8560.95
423_L473_A0.8550.95
405_R408_D0.8460.95
28_E391_G0.8400.95
68_L80_V0.8380.95
45_S208_P0.8320.95
89_A383_L0.8320.95
20_G93_D0.8300.94
229_A475_V0.8300.94
321_V327_I0.8250.94
427_M476_G0.8240.94
265_R274_A0.8220.94
20_G90_A0.8200.94
213_G475_V0.8200.94
444_Q448_R0.8140.94
342_V381_W0.8140.94
60_P88_A0.8100.94
447_L477_L0.8100.94
290_R295_E0.8100.94
125_V132_H0.8080.94
117_H122_I0.8060.94
488_E499_A0.8050.94
65_R77_P0.8040.93
342_V346_G0.8030.93
10_L191_T0.8020.93
316_C327_I0.8020.93
166_T187_F0.8020.93
217_A221_L0.8020.93
55_T91_V0.8010.93
112_A254_E0.7990.93
352_R392_D0.7960.93
229_A479_I0.7950.93
423_L450_L0.7950.93
21_A25_A0.7930.93
217_A475_V0.7910.93
192_V385_A0.7890.93
138_L142_D0.7850.93
93_D98_T0.7850.93
440_L480_A0.7840.93
26_A390_A0.7830.93
86_D383_L0.7790.92
419_K469_L0.7790.92
79_A82_A0.7770.92
14_S34_V0.7760.92
345_V384_R0.7750.92
268_P275_E0.7720.92
271_H278_P0.7710.92
278_P281_V0.7710.92
269_D289_E0.7710.92
189_G397_A0.7670.92
356_V382_G0.7660.92
261_A294_G0.7660.92
170_L184_V0.7650.92
226_V478_L0.7640.92
224_A349_S0.7630.92
347_R351_D0.7630.92
53_I376_L0.7610.91
135_G139_R0.7590.91
261_A295_E0.7580.91
62_S65_R0.7580.91
53_I379_L0.7550.91
421_R424_R0.7550.91
163_G350_L0.7540.91
287_A434_R0.7520.91
132_H136_P0.7510.91
25_A29_G0.7500.91
442_R445_G0.7500.91
45_S211_S0.7480.91
169_L179_R0.7410.90
387_E391_G0.7400.90
305_F323_W0.7400.90
23_L140_H0.7390.90
28_E390_A0.7390.90
438_A442_R0.7380.90
134_L138_L0.7380.90
264_E289_E0.7380.90
48_W208_P0.7360.90
449_R452_G0.7340.90
266_F270_Y0.7330.90
300_V305_F0.7310.90
8_D30_A0.7300.90
450_L473_A0.7300.90
112_A124_H0.7290.90
313_A323_W0.7280.90
315_A319_R0.7280.90
195_T359_C0.7270.90
305_F317_A0.7260.89
16_I379_L0.7260.89
267_M274_A0.7260.89
23_L147_V0.7260.89
200_D424_R0.7250.89
291_D429_E0.7220.89
23_L145_E0.7200.89
26_A32_V0.7200.89
30_A390_A0.7190.89
198_I216_V0.7180.89
206_T332_C0.7180.89
16_I137_F0.7180.89
11_V21_A0.7170.89
11_V22_A0.7170.89
38_A210_G0.7160.89
430_H480_A0.7150.89
160_T166_T0.7140.89
259_R297_R0.7140.89
434_R494_H0.7130.89
212_T468_Q0.7110.88
68_L77_P0.7110.88
59_D62_S0.7100.88
242_A319_R0.7100.88
168_A188_A0.7100.88
84_V87_A0.7090.88
481_R485_E0.7090.88
232_V336_L0.7080.88
35_A186_V0.7080.88
190_S389_A0.7080.88
199_G205_S0.7080.88
152_D175_R0.7030.88
101_V379_L0.7020.88
288_A434_R0.7010.88
229_A482_A0.7000.88
158_L168_A0.7000.88
451_K473_A0.6990.88
261_A293_T0.6990.88
201_L475_V0.6990.88
235_H249_E0.6970.87
489_S499_A0.6960.87
76_D361_R0.6960.87
392_D396_P0.6950.87
38_A43_D0.6940.87
160_T163_G0.6930.87
173_N177_G0.6930.87
159_I187_F0.6920.87
489_S494_H0.6920.87
419_K422_R0.6900.87
30_A393_D0.6880.87
452_G456_S0.6860.87
246_L249_E0.6850.87
6_T31_S0.6850.87
49_A246_L0.6840.86
79_A362_T0.6820.86
122_I371_A0.6820.86
231_Y486_N0.6810.86
435_R493_H0.6810.86
31_S146_N0.6800.86
157_D222_A0.6800.86
74_E230_E0.6790.86
189_G398_P0.6790.86
237_T249_E0.6780.86
102_P136_P0.6780.86
488_E498_E0.6770.86
157_D169_L0.6770.86
474_V477_L0.6770.86
178_D184_V0.6770.86
192_V393_D0.6760.86
422_R425_R0.6730.86
316_C321_V0.6720.86
199_G207_N0.6720.86
28_E387_E0.6710.85
232_V479_I0.6710.85
285_A289_E0.6680.85
54_A63_L0.6680.85
153_A186_V0.6670.85
290_R293_T0.6670.85
11_V389_A0.6660.85
331_P334_H0.6660.85
26_A145_E0.6640.85
418_E422_R0.6640.85
266_F289_E0.6630.85
60_P81_D0.6630.85
55_T123_L0.6610.85
54_A84_V0.6590.84
164_A392_D0.6590.84
414_G418_E0.6590.84
249_E252_R0.6590.84
200_D472_A0.6560.84
271_H277_A0.6560.84
114_E372_S0.6560.84
140_H145_E0.6560.84
416_A466_L0.6560.84
105_G109_F0.6560.84
441_Q481_R0.6550.84
74_E231_Y0.6540.84
347_R354_F0.6530.84
260_N266_F0.6520.84
65_R68_L0.6520.84
67_I80_V0.6520.84
460_T463_S0.6510.84
266_F269_D0.6510.84
114_E122_I0.6510.84
7_T186_V0.6500.84
290_R330_A0.6470.83
439_D443_A0.6460.83
300_V304_A0.6440.83
217_A471_N0.6430.83
11_V29_G0.6420.83
334_H370_L0.6400.83
53_I103_F0.6380.82
231_Y367_A0.6370.82
289_E293_T0.6360.82
8_D188_A0.6350.82
102_P135_G0.6340.82
29_G32_V0.6330.82
111_Y123_L0.6330.82
286_V329_V0.6310.82
21_A32_V0.6310.82
414_G422_R0.6300.82
438_A441_Q0.6290.82
110_D124_H0.6280.81
227_T362_T0.6280.81
251_V300_V0.6280.81
202_Y479_I0.6270.81
114_E117_H0.6260.81
276_L279_R0.6250.81
334_H369_R0.6240.81
27_R93_D0.6240.81
429_E439_D0.6230.81
39_Q151_E0.6220.81
247_V329_V0.6220.81
345_V387_E0.6220.81
204_R428_D0.6210.81
215_G359_C0.6210.81
427_M430_H0.6200.81
235_H252_R0.6200.81
247_V312_L0.6190.81
354_F389_A0.6180.80
386_G393_D0.6180.80
301_S323_W0.6180.80
331_P335_F0.6180.80
258_L267_M0.6170.80
234_F333_E0.6170.80
159_I166_T0.6170.80
27_R145_E0.6170.80
300_V323_W0.6170.80
158_L193_L0.6160.80
449_R453_E0.6160.80
35_A150_L0.6150.80
322_D326_G0.6130.80
443_A446_V0.6120.80
165_V352_R0.6100.80
54_A122_I0.6090.79
267_M277_A0.6090.79
277_A281_V0.6090.79
27_R98_T0.6080.79
20_G382_G0.6080.79
163_G166_T0.6070.79
56_T63_L0.6070.79
322_D325_T0.6060.79
287_A330_A0.6060.79
156_L179_R0.6050.79
251_V305_F0.6030.79
452_G455_D0.6030.79
52_G237_T0.6030.79
24_A28_E0.6020.79
440_L483_A0.5990.78
41_P151_E0.5980.78
296_V329_V0.5980.78
199_G336_L0.5980.78
102_P105_G0.5980.78
158_L229_A0.5970.78
426_V447_L0.5960.78
351_D392_D0.5960.78
39_Q152_D0.5960.78
47_D135_G0.5960.78
263_G326_G0.5950.78
45_S48_W0.5950.78
415_F419_K0.5950.78
204_R330_A0.5940.78
279_R283_A0.5910.77
429_E442_R0.5910.77
280_D284_R0.5900.77
21_A382_G0.5890.77
41_P149_M0.5880.77
291_D496_S0.5870.77
26_A30_A0.5870.77
33_L148_D0.5860.77
356_V386_G0.5850.77
445_G448_R0.5850.77
39_Q42_A0.5830.76
233_Q369_R0.5830.76
156_L169_L0.5820.76
332_C335_F0.5820.76
358_E369_R0.5820.76
391_G395_A0.5810.76
245_F312_L0.5810.76
381_W384_R0.5810.76
273_D281_V0.5800.76
26_A29_G0.5780.76
160_T222_A0.5780.76
380_V384_R0.5760.76
81_D84_V0.5760.76
287_A290_R0.5750.75
260_N265_R0.5730.75
215_G222_A0.5720.75
481_R484_G0.5720.75
252_R255_G0.5710.75
198_I201_L0.5710.75
419_K473_A0.5700.75
128_A132_H0.5700.75
279_R282_V0.5700.75
217_A474_V0.5670.74
448_R452_G0.5660.74
247_V327_I0.5650.74
34_V41_P0.5640.74
372_S377_E0.5640.74
165_V350_L0.5630.74
287_A433_L0.5620.74
414_G419_K0.5620.74
215_G218_M0.5610.74
166_T351_D0.5600.74
415_F418_E0.5600.74
44_A49_A0.5600.74
271_H274_A0.5590.73
420_F465_D0.5580.73
52_G249_E0.5570.73
422_R449_R0.5550.73
160_T351_D0.5550.73
57_R119_A0.5550.73
418_E429_E0.5530.73
420_F468_Q0.5510.72
201_L476_G0.5510.72
220_A226_V0.5500.72
189_G399_S0.5470.72
237_T252_R0.5470.72
266_F285_A0.5470.72
276_L282_V0.5470.72
220_A474_V0.5450.72
86_D380_V0.5440.71
324_E400_E0.5440.71
460_T464_R0.5430.71
55_T111_Y0.5430.71
224_A348_T0.5430.71
199_G232_V0.5430.71
404_L408_D0.5400.71
212_T471_N0.5400.71
468_Q472_A0.5390.71
204_R244_P0.5390.71
24_A382_G0.5380.71
400_E441_Q0.5380.71
68_L73_G0.5380.71
154_A471_N0.5380.71
36_T149_M0.5380.71
404_L407_R0.5370.70
483_A489_S0.5370.70
8_D33_L0.5350.70
168_A191_T0.5340.70
245_F315_A0.5340.70
477_L480_A0.5340.70
417_A465_D0.5330.70
240_D244_P0.5310.70
25_A390_A0.5310.70
36_T151_E0.5310.70
165_V188_A0.5300.69
7_T168_A0.5300.69
346_G381_W0.5300.69
234_F432_G0.5290.69
233_Q334_H0.5280.69
257_L268_P0.5260.69
365_H369_R0.5260.69
70_A368_N0.5240.69
448_R451_K0.5240.69
99_L136_P0.5240.69
480_A484_G0.5230.68
20_G99_L0.5230.68
9_V386_G0.5220.68
76_D341_A0.5210.68
413_D461_R0.5210.68
115_A273_D0.5200.68
398_P401_P0.5190.68
335_F374_S0.5190.68
392_D395_A0.5190.68
237_T280_D0.5180.68
54_A371_A0.5170.68
9_V393_D0.5170.68
74_E486_N0.5160.67
206_T333_E0.5160.67
260_N269_D0.5160.67
64_K85_G0.5160.67
166_T191_T0.5150.67
44_A134_L0.5150.67
447_L473_A0.5150.67
26_A31_S0.5140.67
334_H337_C0.5120.67
19_C134_L0.5110.67
66_D121_R0.5080.66
251_V312_L0.5080.66
279_R284_R0.5080.66
84_V381_W0.5080.66
454_V470_R0.5060.66
213_G217_A0.5060.66
391_G396_P0.5050.66
428_D433_L0.5030.66
314_E317_A0.5020.65
160_T350_L0.5010.65
305_F309_F0.5000.65
251_V309_F0.5000.65
91_V101_V0.5000.65
457_Y466_L0.5000.65
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
2bs2A 2 0.9784 100 0.242 Contact Map
2h88A 2 0.9804 100 0.256 Contact Map
2wdqA 1 0.9804 100 0.261 Contact Map
1kf6A 1 0.9804 100 0.263 Contact Map
1chuA 2 0.8841 100 0.299 Contact Map
2e5vA 1 0.9037 100 0.323 Contact Map
3gyxA 2 0.9627 100 0.334 Contact Map
1jnrA 2 0.9489 100 0.365 Contact Map
4c3xA 4 0.723 100 0.535 Contact Map
4at0A 2 0.7132 100 0.585 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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