GREMLIN Database
Q9HNX2 - Uncharacterized protein
UniProt: Q9HNX2 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 560 (509)
Sequences: 212 (178)
Seq/√Len: 7.9

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
98_F125_F4.4630.99
74_S78_R4.2830.98
408_A443_M4.2720.98
536_D541_D3.9090.97
136_A139_L3.5950.95
324_A385_A3.5790.95
76_S79_A3.5510.94
57_D61_R3.4970.94
75_E79_A3.4230.93
45_V91_A3.3740.93
87_E90_I3.3220.92
306_A312_G3.1610.90
74_S256_Q3.1510.90
69_V115_Y3.1130.89
265_A329_A3.1050.89
246_F256_Q3.0920.89
125_F264_N3.0430.88
71_A106_A3.0280.88
105_A112_R3.0110.87
243_C267_M2.9730.87
75_E256_Q2.8720.85
81_A85_Y2.8290.84
230_D283_Y2.8090.83
68_S260_T2.7650.82
106_A317_A2.7620.82
66_L123_T2.7290.81
350_L389_A2.6570.80
55_F65_L2.6530.79
71_A260_T2.6440.79
73_W106_A2.6420.79
199_H250_R2.5620.77
125_F144_F2.5550.77
75_E78_R2.5390.76
68_S71_A2.5090.75
62_G159_G2.4480.73
498_I535_L2.4070.72
196_D207_K2.3950.72
74_S77_C2.3620.71
429_L438_D2.3210.69
304_F307_G2.3100.69
51_G54_A2.3040.69
271_F274_A2.2290.66
82_Q99_V2.2100.65
65_L101_V2.1820.64
401_A450_L2.1280.62
309_T312_G2.1110.61
284_R333_L2.1090.61
76_S256_Q2.0960.61
64_P125_F2.0630.60
201_G207_K2.0470.59
66_L94_I1.9890.57
73_W307_G1.9880.57
73_W85_Y1.9860.57
67_V126_V1.9720.56
71_A85_Y1.9360.54
208_F245_R1.9340.54
78_R256_Q1.9260.54
71_A317_A1.9110.53
534_W544_A1.8920.53
76_S309_T1.8890.53
363_V374_G1.8710.52
66_L85_Y1.8650.52
315_D323_N1.8420.51
328_D388_T1.8350.50
293_Y487_A1.8330.50
70_V122_S1.8040.49
71_A319_Y1.7850.48
70_V102_R1.7810.48
118_G137_T1.7760.48
238_G289_G1.7630.47
196_D201_G1.7590.47
107_R137_T1.7480.47
67_V115_Y1.7320.46
324_A386_L1.7260.46
304_F309_T1.7170.46
64_P133_I1.7160.46
74_S79_A1.6910.45
81_A106_A1.6850.44
44_R70_V1.6700.44
334_A343_T1.6690.44
327_A349_T1.6670.44
309_T541_D1.6570.43
99_V254_D1.6550.43
306_A311_D1.6280.42
331_L389_A1.6140.41
308_E314_V1.6120.41
44_R72_T1.6060.41
70_V112_R1.6010.41
73_W319_Y1.5780.40
78_R105_A1.5660.40
75_E536_D1.5640.40
112_R120_F1.5450.39
72_T76_S1.5220.38
70_V105_A1.5170.38
533_A551_L1.5110.37
112_R245_R1.5070.37
68_S106_A1.5070.37
78_R309_T1.4990.37
112_R208_F1.4990.37
276_L302_A1.4970.37
85_Y106_A1.4890.37
75_E541_D1.4870.37
547_T550_A1.4850.36
260_T317_A1.4820.36
383_T446_A1.4790.36
256_Q260_T1.4680.36
44_R102_R1.4670.36
106_A260_T1.4510.35
44_R317_A1.4390.35
259_R310_P1.4360.35
105_A122_S1.4300.34
158_A161_D1.4280.34
307_G322_G1.4200.34
51_G55_F1.4070.34
94_I100_P1.4070.34
132_H249_G1.4050.34
304_F308_E1.4050.34
243_C264_N1.4030.33
106_A319_Y1.3990.33
118_G245_R1.3980.33
294_L326_A1.3870.33
297_T314_V1.3840.33
139_L144_F1.3760.32
245_R263_V1.3750.32
85_Y123_T1.3650.32
347_E394_D1.3520.32
300_T305_G1.3510.32
76_S260_T1.3460.31
295_T345_Y1.3450.31
200_A248_H1.3400.31
510_R522_V1.3380.31
232_I441_A1.3380.31
101_V453_L1.3350.31
80_M102_R1.3340.31
112_R317_A1.3310.31
43_T81_A1.3300.31
306_A309_T1.3200.30
77_C258_E1.3170.30
101_V546_A1.3160.30
44_R105_A1.3150.30
43_T71_A1.3110.30
260_T322_G1.3110.30
230_D280_D1.3100.30
288_T339_D1.3050.30
70_V75_E1.3040.30
70_V83_R1.3020.30
350_L385_A1.2980.30
68_S83_R1.2940.30
351_D397_Y1.2900.29
137_T245_R1.2870.29
71_A74_S1.2860.29
268_L294_L1.2780.29
90_I144_F1.2600.28
85_Y102_R1.2590.28
72_T317_A1.2520.28
99_V150_R1.2470.28
75_E246_F1.2400.28
262_S322_G1.2390.28
77_C256_Q1.2390.28
75_E309_T1.2390.28
76_S137_T1.2380.28
79_A256_Q1.2300.27
102_R105_A1.2300.27
324_A353_I1.2250.27
229_L271_F1.2250.27
166_P298_L1.2230.27
105_A120_F1.2200.27
119_G196_D1.2170.27
140_E478_G1.2160.27
202_W217_A1.2130.27
86_A404_V1.2050.27
249_G257_T1.2050.27
87_E141_P1.2050.27
73_W260_T1.2020.27
79_A120_F1.2020.27
147_V151_V1.2010.27
44_R71_A1.2000.27
71_A102_R1.1970.26
319_Y325_L1.1950.26
74_S119_G1.1900.26
70_V106_A1.1870.26
119_G256_Q1.1790.26
306_A353_I1.1760.26
303_A324_A1.1750.26
79_A309_T1.1750.26
83_R105_A1.1600.25
106_A262_S1.1560.25
267_M271_F1.1530.25
119_G245_R1.1520.25
85_Y322_G1.1520.25
118_G208_F1.1470.25
71_A105_A1.1450.25
107_R122_S1.1410.25
309_T536_D1.1370.25
320_A363_V1.1310.24
343_T389_A1.1300.24
90_I143_G1.1290.24
69_V317_A1.1230.24
71_A112_R1.1210.24
534_W541_D1.1210.24
119_G208_F1.1190.24
75_E102_R1.1170.24
102_R112_R1.1100.24
43_T260_T1.1030.24
136_A144_F1.0940.23
112_R122_S1.0930.23
47_W121_P1.0880.23
44_R112_R1.0880.23
426_G429_L1.0860.23
228_T232_I1.0840.23
69_V106_A1.0830.23
260_T309_T1.0790.23
115_Y118_G1.0760.23
74_S138_F1.0740.23
246_F252_W1.0710.23
91_A317_A1.0640.22
60_E314_V1.0610.22
79_A102_R1.0590.22
86_A130_G1.0590.22
119_G207_K1.0550.22
68_S85_Y1.0480.22
525_G528_G1.0400.22
354_A386_L1.0390.22
223_D399_E1.0350.22
76_S541_D1.0340.22
47_W58_A1.0320.22
153_E460_R1.0310.21
68_S315_D1.0300.21
304_F310_P1.0260.21
245_R260_T1.0210.21
85_Y137_T1.0210.21
83_R91_A1.0200.21
306_A322_G1.0170.21
233_R271_F1.0170.21
107_R112_R1.0140.21
104_N121_P1.0110.21
354_A393_L1.0070.21
115_Y216_F1.0060.21
133_I139_L1.0060.21
226_L466_A1.0060.21
77_C196_D1.0050.21
105_A133_I1.0030.21
333_L337_T1.0030.21
77_C115_Y1.0030.21
44_R91_A0.9980.21
70_V260_T0.9950.21
137_T260_T0.9910.20
43_T102_R0.9890.20
76_S120_F0.9880.20
300_T314_V0.9860.20
76_S536_D0.9840.20
256_Q541_D0.9830.20
48_R57_D0.9830.20
79_A260_T0.9820.20
71_A123_T0.9820.20
71_A256_Q0.9790.20
137_T208_F0.9780.20
56_A60_E0.9760.20
294_L430_L0.9760.20
317_A322_G0.9720.20
296_E445_D0.9710.20
78_R260_T0.9710.20
327_A453_L0.9690.20
75_E260_T0.9670.20
105_A260_T0.9660.20
249_G259_R0.9630.20
284_R288_T0.9600.20
307_G310_P0.9590.20
268_L272_A0.9560.20
256_Q536_D0.9530.19
152_R438_D0.9520.19
251_D500_V0.9510.19
99_V152_R0.9510.19
101_V397_Y0.9500.19
110_R408_A0.9500.19
394_D398_L0.9470.19
347_E351_D0.9430.19
102_R262_S0.9390.19
94_I144_F0.9310.19
112_R263_V0.9250.19
112_R256_Q0.9190.19
331_L350_L0.9190.19
133_I263_V0.9160.19
503_D529_D0.9150.18
71_A75_E0.9150.18
245_R267_M0.9120.18
75_E138_F0.9110.18
66_L81_A0.9110.18
236_L254_D0.9110.18
89_R518_H0.9090.18
380_A408_A0.9080.18
112_R137_T0.9080.18
355_D456_E0.9080.18
240_D297_T0.8990.18
324_A350_L0.8990.18
72_T106_A0.8980.18
474_A535_L0.8960.18
506_S514_R0.8950.18
92_A96_D0.8940.18
71_A81_A0.8920.18
111_V155_W0.8910.18
387_T450_L0.8890.18
151_V236_L0.8860.18
270_A325_L0.8860.18
473_A508_L0.8860.18
467_I488_A0.8860.18
540_G549_S0.8850.18
68_S80_M0.8830.18
113_E391_Q0.8820.18
532_T546_A0.8790.18
541_D544_A0.8790.18
318_A386_L0.8790.18
68_S322_G0.8780.18
90_I141_P0.8760.18
119_G246_F0.8740.17
56_A228_T0.8720.17
268_L441_A0.8720.17
246_F261_L0.8710.17
205_S302_A0.8700.17
68_S78_R0.8680.17
193_D414_D0.8680.17
81_A102_R0.8670.17
137_T263_V0.8670.17
105_A245_R0.8670.17
106_A112_R0.8660.17
68_S79_A0.8640.17
343_T522_V0.8630.17
102_R106_A0.8590.17
65_L359_V0.8590.17
229_L274_A0.8550.17
76_S310_P0.8520.17
138_F256_Q0.8510.17
216_F220_R0.8510.17
71_A83_R0.8480.17
97_D393_L0.8470.17
48_R100_P0.8470.17
354_A374_G0.8450.17
72_T260_T0.8420.17
103_V245_R0.8410.17
70_V317_A0.8380.17
136_A485_A0.8360.17
70_V73_W0.8330.17
324_A349_T0.8330.17
363_V382_V0.8320.17
75_E257_T0.8320.17
65_L100_P0.8310.17
73_W81_A0.8290.16
70_V79_A0.8280.16
74_S246_F0.8280.16
434_L438_D0.8250.16
329_A345_Y0.8240.16
401_A446_A0.8240.16
81_A480_Q0.8230.16
45_V70_V0.8230.16
239_D259_R0.8220.16
52_S56_A0.8210.16
116_N244_F0.8210.16
78_R120_F0.8190.16
351_D394_D0.8180.16
109_P378_D0.8160.16
131_E167_R0.8160.16
85_Y107_R0.8160.16
90_I192_A0.8150.16
215_S269_A0.8140.16
191_L203_G0.8140.16
232_I267_M0.8130.16
104_N239_D0.8120.16
132_H250_R0.8100.16
74_S112_R0.8050.16
44_R106_A0.8030.16
98_F258_E0.8010.16
247_A342_A0.8000.16
56_A63_V0.8000.16
410_A465_D0.7990.16
256_Q309_T0.7980.16
126_V432_E0.7980.16
90_I153_E0.7970.16
354_A400_P0.7960.16
235_H254_D0.7960.16
144_F186_L0.7940.16
71_A262_S0.7930.16
75_E120_F0.7920.16
195_Y224_R0.7900.16
350_L357_L0.7900.16
68_S317_A0.7890.16
268_L291_L0.7870.16
71_A322_G0.7870.16
290_V383_T0.7860.16
306_A310_P0.7840.15
327_A367_A0.7840.15
87_E547_T0.7790.15
151_V159_G0.7770.15
142_D298_L0.7750.15
428_G436_P0.7750.15
173_E302_A0.7740.15
165_V191_L0.7730.15
127_T243_C0.7730.15
135_G205_S0.7710.15
102_R317_A0.7700.15
135_G319_Y0.7700.15
122_S319_Y0.7700.15
118_G260_T0.7700.15
492_S529_D0.7680.15
54_A99_V0.7650.15
43_T322_G0.7650.15
80_M207_K0.7640.15
529_D550_A0.7620.15
68_S118_G0.7610.15
66_L436_P0.7600.15
101_V520_K0.7600.15
121_P242_G0.7600.15
363_V379_R0.7580.15
451_S454_T0.7560.15
79_A536_D0.7550.15
228_T287_A0.7540.15
235_H249_G0.7530.15
67_V111_V0.7530.15
160_A198_E0.7520.15
207_K246_F0.7520.15
209_P267_M0.7510.15
202_W214_V0.7510.15
510_R515_M0.7500.15
247_A271_F0.7490.15
66_L132_H0.7490.15
73_W317_A0.7460.15
384_G483_G0.7460.15
103_V208_F0.7460.15
89_R290_V0.7450.15
363_V404_V0.7450.15
118_G398_L0.7410.15
147_V192_A0.7360.14
237_V348_R0.7350.14
55_F111_V0.7350.14
118_G259_R0.7350.14
283_Y485_A0.7340.14
105_A317_A0.7320.14
259_R307_G0.7320.14
132_H240_D0.7320.14
111_V168_A0.7310.14
106_A123_T0.7310.14
354_A358_L0.7300.14
497_V539_D0.7290.14
66_L151_V0.7290.14
302_A485_A0.7280.14
339_D397_Y0.7270.14
108_R316_D0.7260.14
535_L551_L0.7240.14
288_T292_D0.7240.14
132_H263_V0.7230.14
44_R84_T0.7220.14
65_L491_L0.7220.14
101_V301_G0.7220.14
74_S258_E0.7200.14
99_V281_D0.7200.14
500_V525_G0.7190.14
249_G379_R0.7170.14
264_N380_A0.7160.14
43_T86_A0.7160.14
512_A516_A0.7150.14
94_I531_G0.7140.14
251_D321_D0.7130.14
44_R85_Y0.7130.14
124_V128_P0.7130.14
487_A495_P0.7120.14
79_A541_D0.7120.14
68_S76_S0.7090.14
200_A227_R0.7080.14
118_G264_N0.7070.14
463_A485_A0.7070.14
142_D432_E0.7050.14
85_Y440_T0.7040.14
329_A391_Q0.7030.14
63_V301_G0.7020.14
207_K256_Q0.6990.14
206_E224_R0.6990.14
245_R256_Q0.6960.14
108_R375_L0.6950.14
111_V398_L0.6950.14
218_L225_A0.6950.14
50_W143_G0.6950.14
150_R324_A0.6940.14
68_S73_W0.6930.14
220_R320_A0.6920.14
74_S104_N0.6920.14
74_S196_D0.6910.14
262_S440_T0.6910.14
68_S102_R0.6900.14
70_V85_Y0.6890.14
47_W104_N0.6890.14
98_F144_F0.6890.14
93_N176_A0.6880.14
54_A101_V0.6860.13
68_S77_C0.6850.13
320_A430_L0.6850.13
506_S549_S0.6840.13
166_P214_V0.6840.13
138_F252_W0.6820.13
74_S260_T0.6820.13
333_L342_A0.6820.13
291_L333_L0.6810.13
236_L428_G0.6800.13
133_I478_G0.6800.13
108_R287_A0.6770.13
63_V259_R0.6740.13
84_T106_A0.6730.13
256_Q310_P0.6720.13
124_V255_P0.6710.13
401_A447_L0.6710.13
107_R120_F0.6700.13
259_R398_L0.6700.13
77_C119_G0.6690.13
107_R133_I0.6680.13
391_Q449_D0.6670.13
318_A327_A0.6640.13
50_W127_T0.6640.13
66_L135_G0.6610.13
127_T131_E0.6610.13
338_G348_R0.6600.13
392_V529_D0.6600.13
74_S245_R0.6580.13
45_V319_Y0.6580.13
111_V209_P0.6580.13
73_W114_R0.6580.13
44_R69_V0.6560.13
298_L331_L0.6560.13
101_V154_T0.6550.13
64_P265_A0.6550.13
77_C207_K0.6540.13
264_N267_M0.6540.13
105_A208_F0.6530.13
304_F312_G0.6530.13
124_V135_G0.6520.13
262_S317_A0.6510.13
95_N377_A0.6500.13
122_S245_R0.6500.13
228_T304_F0.6500.13
468_A494_R0.6480.13
262_S437_I0.6460.13
74_S248_H0.6450.13
275_Y278_T0.6430.13
392_V417_G0.6430.13
368_G551_L0.6430.13
147_V289_G0.6420.13
257_T321_D0.6410.13
109_P121_P0.6410.13
235_H297_T0.6400.13
168_A188_A0.6400.13
211_P374_G0.6390.13
161_D442_A0.6390.13
147_V365_H0.6370.13
144_F154_T0.6370.13
105_A116_N0.6350.13
536_D544_A0.6350.13
263_V293_Y0.6350.13
218_L279_G0.6340.13
239_D242_G0.6310.12
272_A294_L0.6310.12
111_V303_A0.6290.12
235_H322_G0.6280.12
119_G260_T0.6260.12
272_A400_P0.6260.12
118_G310_P0.6250.12
405_A446_A0.6250.12
385_A404_V0.6240.12
119_G201_G0.6220.12
55_F73_W0.6220.12
142_D186_L0.6210.12
137_T309_T0.6210.12
75_E248_H0.6200.12
144_F273_H0.6200.12
244_F298_L0.6200.12
265_A330_L0.6200.12
71_A76_S0.6190.12
88_P467_I0.6190.12
521_V526_V0.6190.12
214_V270_A0.6180.12
370_A380_A0.6180.12
50_W77_C0.6170.12
241_G315_D0.6170.12
77_C245_R0.6160.12
128_P243_C0.6160.12
244_F251_D0.6150.12
138_F207_K0.6150.12
76_S378_D0.6140.12
353_I376_L0.6130.12
73_W84_T0.6090.12
75_E104_N0.6090.12
43_T85_Y0.6080.12
115_Y196_D0.6080.12
319_Y347_E0.6080.12
112_R232_I0.6080.12
121_P239_D0.6070.12
128_P218_L0.6050.12
198_E356_E0.6050.12
70_V107_R0.6040.12
84_T202_W0.6040.12
405_A450_L0.6040.12
95_N243_C0.6020.12
257_T306_A0.6020.12
347_E398_L0.6020.12
158_A184_E0.6000.12
47_W242_G0.5980.12
77_C124_V0.5980.12
69_V105_A0.5970.12
436_P511_A0.5970.12
64_P551_L0.5960.12
55_F351_D0.5950.12
287_A455_G0.5950.12
101_V307_G0.5950.12
502_D531_G0.5950.12
81_A331_L0.5940.12
200_A207_K0.5940.12
67_V344_R0.5930.12
257_T310_P0.5920.12
354_A382_V0.5900.12
246_F378_D0.5890.12
539_D549_S0.5870.12
303_A307_G0.5860.12
112_R217_A0.5850.12
129_D358_L0.5850.12
157_D467_I0.5840.12
324_A388_T0.5840.12
450_L454_T0.5830.12
309_T378_D0.5830.12
531_G534_W0.5830.12
147_V247_A0.5820.12
389_A392_V0.5820.12
133_I137_T0.5800.12
78_R138_F0.5780.12
222_R264_N0.5780.12
528_G549_S0.5770.12
66_L84_T0.5760.12
201_G228_T0.5760.12
346_A401_A0.5760.12
207_K228_T0.5750.12
67_V438_D0.5750.12
58_A62_G0.5740.12
72_T79_A0.5740.12
311_D390_G0.5730.11
140_E202_W0.5730.11
296_E443_M0.5730.11
101_V238_G0.5730.11
291_L326_A0.5720.11
54_A103_V0.5710.11
61_R65_L0.5690.11
125_F133_I0.5690.11
60_E414_D0.5680.11
268_L326_A0.5670.11
127_T155_W0.5660.11
83_R108_R0.5660.11
217_A374_G0.5650.11
43_T262_S0.5630.11
68_S74_S0.5620.11
84_T319_Y0.5600.11
99_V301_G0.5570.11
71_A79_A0.5550.11
146_Q532_T0.5550.11
190_Q222_R0.5550.11
287_A405_A0.5530.11
503_D521_V0.5530.11
169_L264_N0.5520.11
43_T327_A0.5510.11
51_G453_L0.5510.11
123_T476_R0.5500.11
518_H522_V0.5500.11
329_A378_D0.5490.11
144_F485_A0.5490.11
65_L448_V0.5480.11
289_G298_L0.5470.11
102_R122_S0.5470.11
177_A471_A0.5460.11
133_I304_F0.5460.11
161_D301_G0.5450.11
76_S119_G0.5440.11
185_G225_A0.5430.11
365_H543_D0.5430.11
193_D321_D0.5420.11
137_T207_K0.5420.11
336_Y343_T0.5410.11
85_Y262_S0.5410.11
374_G474_A0.5410.11
48_R232_I0.5410.11
508_L522_V0.5400.11
75_E140_E0.5400.11
135_G325_L0.5380.11
407_R411_D0.5380.11
93_N145_R0.5380.11
53_D275_Y0.5380.11
255_P333_L0.5370.11
380_A387_T0.5370.11
366_Y535_L0.5350.11
208_F256_Q0.5350.11
225_A279_G0.5340.11
383_T405_A0.5330.11
143_G365_H0.5330.11
78_R536_D0.5330.11
419_F429_L0.5320.11
43_T68_S0.5320.11
365_H424_E0.5320.11
184_E320_A0.5320.11
70_V133_I0.5310.11
144_F263_V0.5300.11
81_A482_A0.5300.11
65_L370_A0.5290.11
374_G380_A0.5280.11
161_D319_Y0.5280.11
238_G259_R0.5270.11
517_D548_P0.5260.11
196_D246_F0.5260.11
93_N452_Y0.5250.11
65_L126_V0.5250.11
185_G371_A0.5250.11
171_G291_L0.5250.11
110_R202_W0.5240.11
192_A549_S0.5230.11
292_D362_T0.5220.11
275_Y284_R0.5220.11
48_R61_R0.5210.11
290_V467_I0.5210.11
232_I235_H0.5210.11
83_R379_R0.5210.11
135_G151_V0.5200.11
83_R112_R0.5190.11
190_Q339_D0.5180.11
115_Y323_N0.5170.11
232_I536_D0.5170.11
229_L247_A0.5160.11
125_F209_P0.5150.11
72_T112_R0.5140.11
209_P264_N0.5140.11
259_R380_A0.5140.11
505_G512_A0.5140.11
131_E482_A0.5140.11
107_R354_A0.5130.11
112_R260_T0.5130.11
320_A438_D0.5120.11
78_R541_D0.5120.11
493_T531_G0.5120.11
529_D546_A0.5110.10
141_P255_P0.5110.10
87_E301_G0.5110.10
95_N249_G0.5110.10
114_R331_L0.5110.10
140_E309_T0.5100.10
235_H253_S0.5100.10
338_G545_V0.5090.10
235_H487_A0.5090.10
206_E374_G0.5090.10
74_S293_Y0.5090.10
236_L240_D0.5090.10
248_H255_P0.5080.10
47_W50_W0.5080.10
55_F460_R0.5080.10
102_R246_F0.5070.10
63_V390_G0.5070.10
71_A78_R0.5070.10
207_K252_W0.5070.10
71_A84_T0.5060.10
122_S137_T0.5040.10
71_A77_C0.5030.10
249_G254_D0.5030.10
298_L401_A0.5030.10
44_R75_E0.5020.10
91_A112_R0.5000.10
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
4c1sA 1 0.5839 100 0.814 Contact Map
3wkgA 1 0.6464 100 0.826 Contact Map
3vw5A 1 0.6107 100 0.833 Contact Map
2gz6A 2 0.5982 100 0.838 Contact Map
5agdA 1 0.5554 100 0.84 Contact Map
2zzrA 1 0.5929 100 0.843 Contact Map
2zblA 5 0.6286 100 0.847 Contact Map
1fp3A 2 0.6375 100 0.849 Contact Map
2ahfA 1 0.5411 100 0.85 Contact Map
3gt5A 1 0.6036 100 0.851 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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