Q9HNP7 - HALSA - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

Q9HNP7 - Uncharacterized protein

UniProt:	Q9HNP7	Sequences: MDAVPRALGQAWTDDTPWDVLTALTALDSRMAGHAGDRRAAEHVVDALGEAGVRDATTEPFPLPVWTRGDCALRVTAPDERAFDAIALPYAPAGTATGRLVSAGYGAPAGFDGVDVEGAVVVASTGSPPGGERVHRMEKYGRAVAGGAAGFVFHNQRDGQLPQTGALRGGRVGERPAASVSGEVGSWLEAYAERGGAAELTVDAHTEPGTGVNTHGVLGPDTPTEVVVIAHHDAHDIGEGALDNGCGVATLVAAARVLAAMESVLETRVRLGTVSGEEVGLVGASALADSLDTDAVRAVVNLDGAGRYRTLRAFLHATPAFADVLAAVEDAAGHPIDVVDTLHPYSDHWPFLRAGVPAVQLHSVTPERGRGWGHTQADTRDKVDARTLREHGMLAALLVRELAREDTTIPRASQATLRQRLVDAGMRSGMVAADVWPAAWD	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	441 (395)
Sequences:	4047 (3024)
Seq/√Len:	152.2

BACSU - BSAP
HALSA - Q9HNP7 Q9HRR8
SULSO - Q7LXL7

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
47_A	50_E	3.989	1.00
45_V	49_G	3.877	1.00
372_W	377_A	3.724	1.00
45_V	58_T	3.626	1.00
221_D	266_E	3.600	1.00
116_V	121_V	3.558	1.00
123_A	151_F	3.305	1.00
48_L	273_T	3.285	1.00
228_V	399_V	3.094	1.00
97_T	199_E	3.073	1.00
99_R	119_A	3.029	1.00
253_A	256_R	2.884	1.00
58_T	212_V	2.852	1.00
60_P	210_T	2.778	1.00
103_A	123_A	2.713	1.00
20_V	43_H	2.646	1.00
298_A	402_L	2.582	1.00
120_V	150_G	2.561	1.00
217_V	270_R	2.464	1.00
59_E	291_L	2.448	1.00
222_T	225_E	2.429	1.00
229_I	299_V	2.425	1.00
41_A	214_T	2.335	1.00
286_A	290_S	2.317	1.00
61_F	275_S	2.306	1.00
98_G	149_A	2.303	1.00
118_G	149_A	2.295	1.00
35_A	39_R	2.287	1.00
389_R	393_M	2.270	1.00
37_D	275_S	2.247	1.00
42_E	45_V	2.162	1.00
95_T	201_T	2.114	1.00
38_R	42_E	2.110	1.00
44_V	232_H	2.097	1.00
121_V	148_A	2.094	1.00
251_L	273_T	2.079	1.00
99_R	197_A	2.059	1.00
141_G	145_A	2.023	1.00
224_T	295_A	2.012	1.00
142_R	146_G	1.951	1.00
220_P	266_E	1.934	1.00
100_L	122_V	1.932	1.00
248_V	273_T	1.926	1.00
37_D	232_H	1.922	1.00
284_A	350_P	1.844	1.00
21_L	245_G	1.840	1.00
215_H	272_G	1.838	1.00
293_T	356_V	1.838	1.00
95_T	199_E	1.823	1.00
152_V	180_V	1.818	1.00
250_T	305_A	1.813	1.00
44_V	273_T	1.804	1.00
22_T	380_R	1.798	1.00
42_E	46_D	1.797	1.00
62_P	210_T	1.764	1.00
13_T	16_T	1.745	1.00
101_V	116_V	1.744	1.00
142_R	145_A	1.731	1.00
225_E	267_T	1.728	1.00
23_A	27_L	1.711	1.00
229_I	274_V	1.708	1.00
48_L	216_G	1.705	1.00
250_T	392_G	1.690	1.00
182_G	186_S	1.684	1.00
32_A	276_G	1.683	1.00
111_F	142_R	1.679	1.00
274_V	299_V	1.658	1.00
92_P	95_T	1.651	1.00
62_P	208_P	1.644	1.00
69_G	203_D	1.626	1.00
74_R	199_E	1.597	1.00
111_F	143_A	1.591	1.00
211_G	275_S	1.587	1.00
288_A	350_P	1.555	1.00
14_D	389_R	1.529	1.00
152_V	178_A	1.516	1.00
287_L	296_V	1.499	1.00
18_W	385_A	1.498	1.00
277_E	374_H	1.497	1.00
41_A	232_H	1.491	1.00
186_S	190_A	1.489	1.00
107_A	110_G	1.486	1.00
23_A	26_A	1.482	1.00
106_G	111_F	1.476	1.00
217_V	268_R	1.476	1.00
16_T	253_A	1.474	1.00
126_G	139_K	1.463	1.00
97_T	197_A	1.460	1.00
180_V	184_V	1.459	1.00
60_P	212_V	1.459	1.00
221_D	225_E	1.443	1.00
243_D	277_E	1.440	1.00
302_L	395_A	1.425	1.00
277_E	373_G	1.421	1.00
230_A	248_V	1.419	1.00
41_A	58_T	1.412	1.00
327_A	401_E	1.408	1.00
48_L	255_A	1.406	1.00
46_D	50_E	1.403	1.00
230_A	251_L	1.402	1.00
232_H	273_T	1.398	1.00
400_R	404_R	1.388	1.00
51_A	216_G	1.387	1.00
278_E	374_H	1.382	1.00
258_L	269_V	1.376	1.00
51_A	252_V	1.333	1.00
256_R	260_A	1.329	1.00
20_V	47_A	1.322	1.00
59_E	286_A	1.321	1.00
243_D	374_H	1.321	1.00
98_G	120_V	1.315	1.00
227_V	272_G	1.310	1.00
111_F	146_G	1.308	1.00
270_R	287_L	1.307	1.00
261_M	400_R	1.307	1.00
46_D	49_G	1.305	1.00
116_V	148_A	1.305	1.00
48_L	252_V	1.304	1.00
88_L	91_A	1.304	1.00
239_E	379_T	1.301	1.00
24_L	248_V	1.300	1.00
18_W	22_T	1.298	1.00
115_D	119_A	1.297	1.00
219_G	267_T	1.290	1.00
47_A	256_R	1.286	1.00
231_H	243_D	1.277	1.00
285_S	289_D	1.274	1.00
69_G	205_H	1.265	1.00
219_G	225_E	1.261	1.00
18_W	380_R	1.257	1.00
234_A	240_G	1.255	1.00
276_G	282_V	1.249	1.00
17_P	392_G	1.246	1.00
45_V	56_A	1.245	1.00
100_L	198_A	1.231	1.00
38_R	212_V	1.228	1.00
16_T	256_R	1.228	1.00
323_D	326_A	1.224	1.00
109_A	112_D	1.220	1.00
288_A	354_A	1.214	1.00
58_T	214_T	1.213	1.00
220_P	223_P	1.212	1.00
329_E	394_L	1.212	1.00
219_G	222_T	1.211	1.00
244_N	301_N	1.204	1.00
57_T	217_V	1.195	1.00
265_L	269_V	1.194	1.00
184_V	187_W	1.193	1.00
103_A	121_V	1.190	1.00
31_M	34_H	1.189	1.00
187_W	191_Y	1.183	1.00
231_H	277_E	1.176	1.00
73_L	200_L	1.172	1.00
219_G	268_R	1.161	1.00
40_A	232_H	1.159	1.00
324_V	402_L	1.158	1.00
222_T	266_E	1.152	1.00
340_D	343_H	1.140	1.00
47_A	51_A	1.140	1.00
326_A	330_D	1.136	1.00
21_L	249_A	1.126	1.00
59_E	213_N	1.123	1.00
143_A	148_A	1.117	0.99
53_V	216_G	1.117	0.99
300_V	399_V	1.108	0.99
53_V	271_L	1.106	0.99
152_V	198_A	1.100	0.99
28_D	35_A	1.099	0.99
82_A	85_A	1.098	0.99
299_V	358_A	1.091	0.99
93_A	203_D	1.087	0.99
379_T	382_K	1.082	0.99
339_V	342_L	1.082	0.99
278_E	373_G	1.081	0.99
20_V	252_V	1.078	0.99
258_L	271_L	1.077	0.99
41_A	212_V	1.075	0.99
70_D	203_D	1.072	0.99
87_A	91_A	1.068	0.99
144_V	174_E	1.057	0.99
265_L	268_R	1.054	0.99
120_V	198_A	1.053	0.99
25_T	241_A	1.051	0.99
293_T	354_A	1.049	0.99
255_A	271_L	1.047	0.99
327_A	330_D	1.039	0.99
229_I	272_G	1.036	0.99
31_M	279_V	1.036	0.99
286_A	289_D	1.028	0.99
36_G	39_R	1.015	0.99
59_E	290_S	1.011	0.99
269_V	403_A	1.008	0.99
20_V	51_A	0.998	0.99
254_A	399_V	0.998	0.99
103_A	151_F	0.994	0.99
221_D	224_T	0.993	0.99
140_Y	151_F	0.992	0.99
80_E	84_D	0.991	0.99
228_V	251_L	0.987	0.99
20_V	253_A	0.985	0.99
323_D	327_A	0.983	0.99
231_H	303_D	0.983	0.99
51_A	259_A	0.982	0.99
218_L	265_L	0.978	0.99
100_L	152_V	0.978	0.99
124_S	189_E	0.973	0.99
299_V	351_F	0.972	0.99
87_A	90_Y	0.967	0.99
102_S	124_S	0.964	0.98
72_A	201_T	0.962	0.98
53_V	255_A	0.961	0.98
235_H	238_G	0.960	0.98
187_W	190_A	0.955	0.98
231_H	278_E	0.955	0.98
143_A	147_G	0.955	0.98
317_A	322_A	0.954	0.98
103_A	114_V	0.951	0.98
53_V	218_L	0.950	0.98
274_V	351_F	0.949	0.98
82_A	87_A	0.945	0.98
285_S	350_P	0.940	0.98
150_G	200_L	0.938	0.98
102_S	192_A	0.935	0.98
185_G	189_E	0.933	0.98
12_W	257_V	0.928	0.98
215_H	270_R	0.927	0.98
242_L	372_W	0.923	0.98
296_V	356_V	0.917	0.98
339_V	343_H	0.915	0.98
108_P	146_G	0.914	0.98
76_T	79_D	0.913	0.98
100_L	188_L	0.912	0.98
231_H	374_H	0.911	0.98
106_G	110_G	0.911	0.98
213_N	283_G	0.909	0.98
277_E	346_S	0.907	0.98
228_V	271_L	0.907	0.98
218_L	259_A	0.907	0.98
180_V	185_G	0.903	0.98
254_A	396_A	0.900	0.98
168_R	171_R	0.899	0.98
282_V	286_A	0.898	0.98
372_W	375_T	0.895	0.98
25_T	380_R	0.892	0.97
277_E	281_L	0.890	0.97
281_L	346_S	0.890	0.97
19_D	22_T	0.889	0.97
104_G	110_G	0.887	0.97
226_V	402_L	0.883	0.97
42_E	58_T	0.881	0.97
35_A	38_R	0.880	0.97
80_E	83_F	0.877	0.97
372_W	382_K	0.875	0.97
139_K	143_A	0.872	0.97
380_R	385_A	0.870	0.97
48_L	53_V	0.870	0.97
181_S	184_V	0.868	0.97
218_L	271_L	0.868	0.97
363_S	391_H	0.867	0.97
18_W	384_D	0.866	0.97
116_V	146_G	0.865	0.97
253_A	257_V	0.863	0.97
140_Y	177_A	0.862	0.97
288_A	351_F	0.861	0.97
292_D	295_A	0.861	0.97
242_L	304_G	0.859	0.97
48_L	271_L	0.859	0.97
163_Q	168_R	0.849	0.97
324_V	328_V	0.849	0.97
65_V	207_E	0.849	0.97
111_F	116_V	0.848	0.97
140_Y	167_L	0.848	0.97
14_D	18_W	0.847	0.97
105_Y	124_S	0.846	0.97
67_T	205_H	0.846	0.97
243_D	373_G	0.845	0.97
200_L	204_A	0.842	0.96
231_H	373_G	0.840	0.96
258_L	396_A	0.840	0.96
37_D	44_V	0.835	0.96
54_R	259_A	0.834	0.96
328_V	398_L	0.834	0.96
277_E	303_D	0.831	0.96
322_A	326_A	0.830	0.96
102_S	189_E	0.826	0.96
73_L	85_A	0.826	0.96
247_G	303_D	0.826	0.96
84_D	87_A	0.825	0.96
88_L	177_A	0.824	0.96
30_R	245_G	0.819	0.96
23_A	39_R	0.814	0.96
124_S	154_H	0.813	0.96
242_L	307_R	0.813	0.96
111_F	121_V	0.813	0.96
234_A	238_G	0.812	0.96
19_D	23_A	0.811	0.96
65_V	209_G	0.809	0.96
348_H	360_Q	0.803	0.95
227_V	299_V	0.796	0.95
100_L	150_G	0.796	0.95
243_D	347_D	0.795	0.95
28_D	36_G	0.790	0.95
161_L	164_T	0.786	0.95
332_A	335_P	0.785	0.95
222_T	406_D	0.785	0.95
240_G	378_D	0.780	0.95
284_A	347_D	0.777	0.94
231_H	347_D	0.776	0.94
81_R	84_D	0.775	0.94
130_G	153_F	0.773	0.94
21_L	25_T	0.773	0.94
304_G	373_G	0.773	0.94
125_T	136_R	0.773	0.94
277_E	301_N	0.771	0.94
352_L	358_A	0.770	0.94
125_T	155_N	0.769	0.94
85_A	88_L	0.768	0.94
334_H	337_D	0.765	0.94
233_D	280_G	0.764	0.94
73_L	178_A	0.762	0.94
258_L	399_V	0.761	0.94
243_D	301_N	0.754	0.94
150_G	176_P	0.751	0.93
221_D	268_R	0.750	0.93
180_V	188_L	0.749	0.93
331_A	397_L	0.748	0.93
75_V	198_A	0.747	0.93
106_G	143_A	0.744	0.93
231_H	244_N	0.744	0.93
59_E	287_L	0.743	0.93
278_E	281_L	0.741	0.93
322_A	325_L	0.741	0.93
289_D	354_A	0.741	0.93
243_D	303_D	0.740	0.93
106_G	139_K	0.739	0.93
32_A	279_V	0.739	0.93
274_V	284_A	0.736	0.93
16_T	19_D	0.735	0.93
156_Q	159_G	0.734	0.93
346_S	373_G	0.733	0.93
241_A	378_D	0.732	0.93
323_D	411_R	0.732	0.93
23_A	43_H	0.730	0.92
287_L	291_L	0.728	0.92
278_E	284_A	0.728	0.92
327_A	331_A	0.727	0.92
402_L	405_E	0.727	0.92
85_A	89_P	0.726	0.92
45_V	214_T	0.724	0.92
20_V	256_R	0.723	0.92
329_E	333_G	0.719	0.92
144_V	175_R	0.717	0.92
80_E	87_A	0.717	0.92
231_H	301_N	0.711	0.91
258_L	265_L	0.711	0.91
246_C	383_V	0.709	0.91
345_Y	349_W	0.709	0.91
227_V	296_V	0.708	0.91
304_G	346_S	0.708	0.91
117_E	147_G	0.707	0.91
220_P	225_E	0.706	0.91
303_D	346_S	0.705	0.91
31_M	36_G	0.704	0.91
223_P	268_R	0.702	0.91
112_D	146_G	0.702	0.91
300_V	395_A	0.701	0.91
9_G	397_L	0.698	0.91
361_L	395_A	0.696	0.91
301_N	347_D	0.695	0.90
218_L	258_L	0.693	0.90
10_Q	14_D	0.693	0.90
54_R	217_V	0.693	0.90
255_A	259_A	0.689	0.90
44_V	248_V	0.688	0.90
83_F	87_A	0.688	0.90
110_G	113_G	0.684	0.90
76_T	97_T	0.681	0.90
276_G	279_V	0.679	0.89
230_A	244_N	0.679	0.89
305_A	308_Y	0.679	0.89
374_H	378_D	0.678	0.89
76_T	199_E	0.678	0.89
396_A	400_R	0.677	0.89
57_T	215_H	0.676	0.89
236_D	239_E	0.675	0.89
332_A	397_L	0.674	0.89
257_V	396_A	0.672	0.89
383_V	388_L	0.671	0.89
14_D	386_R	0.669	0.89
106_G	123_A	0.668	0.89
317_A	321_F	0.668	0.89
191_Y	196_G	0.668	0.89
75_V	78_P	0.666	0.89
386_R	389_R	0.665	0.88
325_L	329_E	0.663	0.88
40_A	44_V	0.661	0.88
216_G	271_L	0.660	0.88
24_L	245_G	0.660	0.88
228_V	395_A	0.660	0.88
232_H	248_V	0.658	0.88
43_H	47_A	0.656	0.88
107_A	111_F	0.656	0.88
108_P	112_D	0.655	0.88
347_D	373_G	0.655	0.88
61_F	290_S	0.654	0.88
345_Y	373_G	0.654	0.88
297_R	408_T	0.650	0.87
164_T	167_L	0.650	0.87
23_A	50_E	0.650	0.87
350_P	353_R	0.649	0.87
29_S	36_G	0.648	0.87
245_G	249_A	0.648	0.87
143_A	175_R	0.647	0.87
239_E	242_L	0.645	0.87
15_D	19_D	0.645	0.87
277_E	347_D	0.644	0.87
82_A	89_P	0.644	0.87
328_V	331_A	0.643	0.87
30_R	244_N	0.642	0.87
59_E	215_H	0.642	0.87
332_A	390_E	0.639	0.86
401_E	405_E	0.637	0.86
20_V	23_A	0.636	0.86
178_A	204_A	0.632	0.86
292_D	296_V	0.631	0.86
163_Q	166_A	0.631	0.86
10_Q	15_D	0.631	0.86
301_N	346_S	0.629	0.86
37_D	212_V	0.629	0.86
122_V	189_E	0.628	0.85
321_F	325_L	0.628	0.85
355_G	358_A	0.627	0.85
17_P	250_T	0.627	0.85
320_A	323_D	0.624	0.85
259_A	264_V	0.622	0.85
319_P	322_A	0.622	0.85
158_D	183_E	0.622	0.85
68_R	87_A	0.622	0.85
218_L	269_V	0.621	0.85
344_P	349_W	0.620	0.85
240_G	243_D	0.620	0.85
122_V	152_V	0.618	0.85
329_E	336_I	0.617	0.84
272_G	287_L	0.616	0.84
304_G	307_R	0.616	0.84
191_Y	195_G	0.615	0.84
238_G	376_Q	0.615	0.84
211_G	276_G	0.615	0.84
226_V	298_A	0.614	0.84
30_R	40_A	0.614	0.84
349_W	353_R	0.612	0.84
165_G	171_R	0.612	0.84
167_L	170_G	0.612	0.84
311_L	314_F	0.608	0.84
15_D	386_R	0.607	0.83
32_A	37_D	0.607	0.83
29_S	237_I	0.607	0.83
163_Q	167_L	0.607	0.83
226_V	297_R	0.607	0.83
387_T	391_H	0.606	0.83
16_T	20_V	0.605	0.83
30_R	234_A	0.603	0.83
38_R	58_T	0.602	0.83
216_G	273_T	0.600	0.83
219_G	223_P	0.599	0.83
317_A	325_L	0.598	0.83
281_L	284_A	0.597	0.82
20_V	249_A	0.596	0.82
254_A	258_L	0.593	0.82
219_G	224_T	0.591	0.82
120_V	200_L	0.590	0.82
64_P	208_P	0.590	0.82
359_V	398_L	0.589	0.82
243_D	278_E	0.588	0.82
24_L	44_V	0.586	0.81
122_V	192_A	0.586	0.81
285_S	353_R	0.585	0.81
53_V	56_A	0.585	0.81
242_L	366_P	0.584	0.81
311_L	315_L	0.584	0.81
98_G	119_A	0.581	0.81
164_T	169_G	0.581	0.81
160_Q	163_Q	0.581	0.81
123_A	153_F	0.579	0.81
226_V	403_A	0.579	0.81
189_E	192_A	0.578	0.80
71_C	74_R	0.577	0.80
226_V	399_V	0.576	0.80
330_D	336_I	0.576	0.80
278_E	347_D	0.576	0.80
139_K	155_N	0.576	0.80
242_L	306_G	0.576	0.80
261_M	396_A	0.573	0.80
338_V	341_T	0.573	0.80
37_D	41_A	0.572	0.80
306_G	388_L	0.571	0.80
228_V	269_V	0.571	0.80
250_T	254_A	0.571	0.80
158_D	182_G	0.570	0.79
74_R	79_D	0.569	0.79
266_E	406_D	0.568	0.79
112_D	115_D	0.567	0.79
37_D	211_G	0.567	0.79
66_W	177_A	0.566	0.79
178_A	202_V	0.565	0.79
88_L	121_V	0.565	0.79
242_L	246_C	0.564	0.79
338_V	342_L	0.563	0.79
347_D	374_H	0.562	0.79
29_S	34_H	0.562	0.79
261_M	265_L	0.560	0.78
74_R	77_A	0.560	0.78
84_D	89_P	0.559	0.78
83_F	86_I	0.559	0.78
68_R	236_D	0.559	0.78
174_E	177_A	0.558	0.78
17_P	249_A	0.558	0.78
405_E	408_T	0.557	0.78
11_A	261_M	0.557	0.78
83_F	88_L	0.557	0.78
220_P	265_L	0.555	0.78
53_V	259_A	0.555	0.78
320_A	410_P	0.554	0.78
14_D	17_P	0.553	0.77
293_T	296_V	0.552	0.77
381_D	385_A	0.552	0.77
54_R	264_V	0.551	0.77
107_A	128_P	0.551	0.77
37_D	40_A	0.551	0.77
307_R	366_P	0.550	0.77
298_A	359_V	0.550	0.77
165_G	169_G	0.550	0.77
164_T	168_R	0.550	0.77
76_T	197_A	0.549	0.77
121_V	146_G	0.548	0.77
235_H	278_E	0.548	0.77
83_F	90_Y	0.547	0.77
167_L	171_R	0.547	0.77
9_G	12_W	0.545	0.76
34_H	65_V	0.544	0.76
178_A	200_L	0.543	0.76
122_V	154_H	0.540	0.76
183_E	186_S	0.540	0.76
107_A	127_S	0.539	0.76
117_E	145_A	0.538	0.75
188_L	196_G	0.537	0.75
110_G	126_G	0.536	0.75
156_Q	182_G	0.535	0.75
118_G	148_A	0.534	0.75
344_P	352_L	0.534	0.75
80_E	90_Y	0.533	0.75
114_V	121_V	0.533	0.75
218_L	268_R	0.532	0.75
318_T	321_F	0.531	0.75
234_A	245_G	0.531	0.75
362_H	365_T	0.530	0.74
300_V	402_L	0.529	0.74
321_F	328_V	0.529	0.74
38_R	41_A	0.527	0.74
12_W	393_M	0.527	0.74
97_T	200_L	0.526	0.74
23_A	47_A	0.525	0.74
324_V	401_E	0.525	0.74
117_E	197_A	0.524	0.74
24_L	40_A	0.524	0.74
278_E	301_N	0.524	0.74
227_V	270_R	0.524	0.74
86_I	89_P	0.524	0.74
328_V	332_A	0.523	0.73
138_E	141_G	0.523	0.73
118_G	121_V	0.523	0.73
174_E	178_A	0.522	0.73
250_T	306_G	0.521	0.73
299_V	350_P	0.517	0.73
301_N	374_H	0.515	0.72
405_E	409_I	0.514	0.72
130_G	136_R	0.512	0.72
105_Y	139_K	0.512	0.72
259_A	262_E	0.510	0.72
284_A	348_H	0.510	0.72
72_A	203_D	0.509	0.71
303_D	374_H	0.508	0.71
246_C	304_G	0.508	0.71
254_A	257_V	0.507	0.71
32_A	209_G	0.505	0.71
159_G	377_A	0.504	0.71
320_A	324_V	0.504	0.71
331_A	401_E	0.503	0.71
160_Q	164_T	0.502	0.70
21_L	385_A	0.500	0.70
85_A	90_Y	0.500	0.70
225_E	268_R	0.500	0.70

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3kasA	2	0.9773	100	0.284	Contact Map
4tweA	2	0.9773	100	0.289	Contact Map
3fedA	2	0.9728	100	0.295	Contact Map
2ek8A	2	0.8957	100	0.305	Contact Map
3iibA	2	0.9342	100	0.333	Contact Map
4r12A	1	0.8118	100	0.523	Contact Map
3k9tA	3	0.8209	100	0.56	Contact Map
1tkjA	1	0.5714	100	0.598	Contact Map
5a63A	1	0.8413	100	0.621	Contact Map
4mhpA	1	0.5896	100	0.623	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0114 seconds.