Q9HNK0 - HALSA - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

Q9HNK0 - Long-chain fatty-acid-CoA ligase

UniProt:	Q9HNK0	Sequences: MDPRDAEREYDDHVIARQTLSRTFEDAAERHADSPAQAYKGGVYDRSLAPEVVDPAPDGGVETLSYDALRDIVRTLAAGFRDLGVTAGDRVGVFAHTRMEWAQCDLAVLAAGGAVTTVYASSSPAQIAHLLGDSGAVGVVVENDALRQRVREVESDLDDLEFVATMDTPSDDTRPLSAVYDRGRDAFDPDAYQGWIDDRDPDDLASLIYTSGTTGTPKGVALTHRNFHANLNQSRRRFGPRPDRGDAPAVTSDSRHLSFLPLAHVLERLSGHFLPLASGAQVCYAESPDTLREDFGLFEPTSATSVPRVYEKLYDTIREQAADSPVSERVFEWATRVGRAAHTTDDPGIGLRAAHALADTLVFSDIRDALGGEIEFFISGGGSLSPELCALFHGMGLPILEGYGLTETSPVLAVNPYEDPIVGTIGPPVTDTELTVDETIASPEQRQRCDGAAGELLARGPQVFDGYWGLPDATDAAFVTREGKEWFRTGDVVELRPDGYVRFLERAKQLLTLSTGKNVAPGPIEDAFAASPLVAQAMVVGDGQKFVSAILVPNFDAVSEWAASQEIALPDDRDAICRDERVRARIQSAVDDVNTGFEPYERIKQFRLVATEFTEANDLLTPTMKKKRHHIRDRFADAVGDVYDDSEFST	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	650 (569)
Sequences:	6652 (4554)
Seq/√Len:	190.9

ECOLI - FADK ACSA AAS LCFA PRPE ENTE ENTF CAIC MENE
BACSU - ACSA DHBE YNGI LCFA PPSE SRFAC LCFB YDAB YTCI PPSC MENE PPSB DLTA YHFT
HALSA - Q9HNK0 Q9HRY8 Q9HSM3 Q9HQU8 Q9HQ43 Q9HQN8
SULSO - Q97UX8 Q97VT6 Q97U22 Q97WQ9 Q97UW7 Q97VU7 Q97WQ0 Q97YK9 Q97WK0 Q97UF6 Q97XW4 Q97V27 Q97WS5

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
471_P	475_D	4.369	1.00
456_L	493_V	4.353	1.00
433_E	459_R	4.163	1.00
204_L	221_A	3.712	1.00
587_Q	591_D	3.667	1.00
470_L	473_A	3.662	1.00
135_G	469_G	3.632	1.00
137_V	161_E	3.518	1.00
255_R	373_E	3.428	1.00
223_T	465_D	3.263	1.00
473_A	476_A	3.251	1.00
424_T	502_R	3.236	1.00
85_V	113_G	3.135	1.00
405_L	487_F	3.029	1.00
412_L	458_A	2.956	1.00
254_S	375_E	2.936	1.00
494_E	502_R	2.851	1.00
478_F	488_R	2.818	1.00
456_L	501_V	2.779	1.00
128_A	156_D	2.722	1.00
92_G	136_A	2.696	1.00
437_D	453_A	2.669	1.00
133_D	209_Y	2.639	1.00
435_T	457_L	2.636	1.00
89_D	137_V	2.599	1.00
421_I	498_D	2.482	1.00
95_A	98_R	2.475	1.00
299_E	373_E	2.459	1.00
202_D	225_R	2.454	1.00
480_T	488_R	2.449	1.00
495_L	501_V	2.425	1.00
225_R	461_P	2.419	1.00
221_A	466_G	2.399	1.00
46_R	50_P	2.367	1.00
53_V	67_D	2.364	1.00
79_G	179_V	2.361	1.00
572_D	575_A	2.341	1.00
104_C	140_V	2.307	1.00
477_A	487_F	2.276	1.00
75_T	184_R	2.260	1.00
636_A	640_G	2.222	1.00
456_L	503_F	2.207	1.00
626_K	631_I	2.180	1.00
133_D	470_L	2.178	1.00
432_T	462_Q	2.174	1.00
457_L	488_R	2.172	1.00
72_I	180_Y	2.144	1.00
105_D	268_R	2.141	1.00
458_A	463_V	2.133	1.00
359_D	367_R	2.125	1.00
226_N	463_V	2.117	1.00
108_V	113_G	2.106	1.00
73_V	107_A	2.097	1.00
305_S	310_Y	2.081	1.00
607_R	642_V	2.051	1.00
76_L	107_A	2.044	1.00
333_W	358_A	2.031	1.00
91_V	108_V	2.016	1.00
201_P	225_R	1.982	1.00
408_T	487_F	1.973	1.00
299_E	372_G	1.967	1.00
133_D	469_G	1.964	1.00
512_T	518_N	1.958	1.00
55_P	65_S	1.940	1.00
55_P	63_T	1.932	1.00
200_D	203_D	1.929	1.00
52_V	67_D	1.910	1.00
453_A	507_A	1.892	1.00
384_L	389_C	1.883	1.00
379_S	384_L	1.882	1.00
472_D	476_A	1.877	1.00
48_L	70_R	1.854	1.00
493_V	501_V	1.852	1.00
586_I	608_L	1.844	1.00
528_F	537_A	1.831	1.00
580_E	584_A	1.828	1.00
283_C	298_F	1.821	1.00
181_D	184_R	1.817	1.00
607_R	638_A	1.783	1.00
67_D	71_D	1.775	1.00
589_A	592_D	1.773	1.00
70_R	74_R	1.756	1.00
428_P	434_L	1.750	1.00
325_P	328_E	1.748	1.00
492_V	505_E	1.733	1.00
58_D	281_Q	1.728	1.00
221_A	465_D	1.723	1.00
128_A	132_G	1.687	1.00
68_A	71_D	1.685	1.00
45_D	70_R	1.680	1.00
114_A	204_L	1.677	1.00
204_L	465_D	1.668	1.00
140_V	166_M	1.656	1.00
76_L	176_L	1.641	1.00
58_D	63_T	1.638	1.00
254_S	301_T	1.614	1.00
421_I	500_Y	1.614	1.00
413_A	501_V	1.607	1.00
226_N	409_S	1.605	1.00
408_T	458_A	1.604	1.00
627_K	630_H	1.601	1.00
310_Y	377_F	1.594	1.00
632_R	639_V	1.587	1.00
206_S	268_R	1.579	1.00
47_S	51_E	1.578	1.00
567_I	579_D	1.565	1.00
316_T	320_Q	1.562	1.00
619_L	634_R	1.559	1.00
81_R	111_A	1.559	1.00
531_S	589_A	1.555	1.00
85_V	138_G	1.549	1.00
191_A	194_G	1.547	1.00
540_V	548_S	1.538	1.00
76_L	103_Q	1.537	1.00
607_R	641_D	1.534	1.00
138_G	162_F	1.532	1.00
343_T	390_A	1.532	1.00
529_A	537_A	1.529	1.00
475_D	481_R	1.521	1.00
638_A	641_D	1.520	1.00
537_A	551_L	1.498	1.00
587_Q	606_F	1.497	1.00
458_A	489_T	1.496	1.00
75_T	180_Y	1.493	1.00
204_L	223_T	1.490	1.00
619_L	630_H	1.487	1.00
129_H	216_T	1.483	1.00
59_G	99_M	1.481	1.00
324_S	328_E	1.463	1.00
464_F	477_A	1.461	1.00
64_L	69_L	1.450	1.00
138_G	164_A	1.445	1.00
95_A	166_M	1.443	1.00
496_R	500_Y	1.439	1.00
535_A	612_E	1.438	1.00
535_A	554_N	1.438	1.00
386_P	390_A	1.435	1.00
630_H	633_D	1.431	1.00
76_L	140_V	1.428	1.00
175_P	178_A	1.427	1.00
421_I	496_R	1.424	1.00
223_T	226_N	1.421	1.00
124_P	152_E	1.411	1.00
64_L	72_I	1.405	1.00
551_L	606_F	1.393	1.00
544_Q	640_G	1.379	1.00
96_H	142_E	1.373	1.00
548_S	642_V	1.373	1.00
56_A	69_L	1.372	1.00
561_W	565_Q	1.371	1.00
85_V	91_V	1.353	1.00
434_L	495_L	1.349	1.00
436_V	456_L	1.346	1.00
74_R	193_Q	1.340	1.00
65_S	68_A	1.339	1.00
584_A	588_S	1.337	1.00
416_P	427_P	1.334	1.00
581_R	584_A	1.328	1.00
509_Q	522_G	1.328	1.00
586_I	589_A	1.322	1.00
98_R	167_D	1.313	1.00
178_A	181_D	1.312	1.00
437_D	457_L	1.311	1.00
255_R	281_Q	1.305	1.00
92_G	131_L	1.301	1.00
80_F	108_V	1.300	1.00
139_V	150_V	1.288	1.00
322_A	328_E	1.281	1.00
328_E	332_E	1.274	1.00
527_A	596_G	1.273	1.00
82_D	182_R	1.272	1.00
54_D	253_D	1.270	1.00
109_L	205_A	1.269	1.00
434_L	458_A	1.266	1.00
433_E	486_W	1.266	1.00
76_L	179_V	1.263	1.00
550_I	609_V	1.263	1.00
496_R	502_R	1.261	1.00
86_T	89_D	1.258	1.00
38_A	42_G	1.256	1.00
71_D	75_T	1.256	1.00
81_R	195_W	1.245	1.00
419_D	427_P	1.244	1.00
437_D	454_G	1.242	1.00
275_P	280_A	1.234	1.00
181_D	185_D	1.231	1.00
69_L	106_L	1.231	1.00
464_F	478_F	1.230	1.00
290_T	293_E	1.227	1.00
611_T	617_N	1.225	1.00
460_G	463_V	1.224	1.00
314_Y	318_R	1.224	1.00
633_D	636_A	1.217	1.00
629_H	633_D	1.217	1.00
176_L	180_Y	1.216	1.00
134_S	209_Y	1.215	1.00
91_V	113_G	1.214	1.00
221_A	468_W	1.214	1.00
90_R	468_W	1.213	1.00
105_D	206_S	1.210	1.00
222_L	226_N	1.207	1.00
301_T	373_E	1.205	1.00
108_V	115_V	1.202	1.00
558_V	582_V	1.201	1.00
528_F	534_V	1.198	1.00
102_A	284_Y	1.197	1.00
481_R	488_R	1.195	1.00
457_L	480_T	1.193	1.00
72_I	103_Q	1.189	1.00
434_L	456_L	1.187	1.00
107_A	111_A	1.184	1.00
478_F	487_F	1.182	1.00
255_R	301_T	1.182	1.00
555_F	559_S	1.181	1.00
436_V	495_L	1.180	1.00
44_Y	48_L	1.179	1.00
99_M	103_Q	1.177	1.00
565_Q	581_R	1.175	1.00
360_T	364_S	1.174	1.00
258_S	267_E	1.169	1.00
253_D	301_T	1.160	1.00
144_D	148_Q	1.154	1.00
437_D	488_R	1.153	1.00
146_L	149_R	1.147	1.00
129_H	133_D	1.142	1.00
235_R	278_S	1.141	1.00
551_L	590_V	1.137	1.00
401_E	423_G	1.135	1.00
434_L	501_V	1.133	1.00
77_A	111_A	1.129	1.00
538_M	626_K	1.128	1.00
405_L	408_T	1.124	1.00
408_T	463_V	1.123	1.00
90_R	116_T	1.122	1.00
64_L	99_M	1.121	1.00
380_G	402_G	1.118	1.00
434_L	493_V	1.116	1.00
131_L	136_A	1.116	1.00
336_R	340_A	1.108	1.00
551_L	586_I	1.108	1.00
98_R	142_E	1.103	1.00
77_A	110_A	1.096	1.00
492_V	507_A	1.095	1.00
51_E	54_D	1.090	1.00
135_G	159_D	1.090	1.00
641_D	644_D	1.088	1.00
296_G	369_A	1.087	1.00
599_P	602_R	1.086	1.00
236_R	430_T	1.086	1.00
285_A	294_D	1.080	1.00
74_R	110_A	1.078	1.00
637_D	641_D	1.076	1.00
87_A	203_D	1.076	1.00
614_T	617_N	1.075	1.00
314_Y	388_L	1.070	1.00
611_T	619_L	1.070	1.00
44_Y	73_V	1.068	1.00
56_A	66_Y	1.068	1.00
324_S	327_S	1.067	1.00
80_F	140_V	1.064	1.00
549_A	603_I	1.060	1.00
182_R	185_D	1.058	1.00
72_I	75_T	1.052	1.00
585_R	588_S	1.047	1.00
571_D	575_A	1.045	1.00
567_I	581_R	1.043	1.00
93_V	115_V	1.043	1.00
202_D	465_D	1.040	1.00
46_R	49_A	1.039	1.00
76_L	80_F	1.038	1.00
474_T	478_F	1.036	1.00
230_N	462_Q	1.034	1.00
562_A	567_I	1.033	1.00
538_M	632_R	1.031	1.00
329_R	333_W	1.029	1.00
419_D	500_Y	1.028	1.00
390_A	422_V	1.026	1.00
413_A	434_L	1.026	1.00
561_W	582_V	1.026	1.00
437_D	507_A	1.025	1.00
55_P	58_D	1.024	1.00
528_F	603_I	1.023	1.00
54_D	252_S	1.021	1.00
339_R	343_T	1.021	1.00
112_G	199_R	1.020	1.00
69_L	103_Q	1.017	1.00
580_E	583_R	1.011	1.00
349_I	352_R	1.011	1.00
333_W	336_R	1.006	1.00
94_F	127_I	1.006	1.00
177_S	181_D	1.005	1.00
266_L	304_T	1.003	1.00
533_L	585_R	1.003	1.00
92_G	139_V	0.999	1.00
383_S	543_G	0.995	0.99
577_C	608_L	0.994	0.99
287_S	290_T	0.992	0.99
428_P	499_G	0.992	0.99
266_L	402_G	0.988	0.99
131_L	157_L	0.986	0.99
139_V	160_L	0.986	0.99
266_L	378_I	0.985	0.99
333_W	337_V	0.985	0.99
456_L	495_L	0.980	0.99
605_Q	642_V	0.974	0.99
220_V	464_F	0.972	0.99
58_D	283_C	0.969	0.99
340_A	354_A	0.969	0.99
147_R	151_R	0.966	0.99
294_D	297_L	0.964	0.99
508_K	518_N	0.962	0.99
207_L	468_W	0.961	0.99
105_D	115_V	0.961	0.99
258_S	282_V	0.959	0.99
466_G	471_P	0.958	0.99
233_Q	431_D	0.957	0.99
320_Q	323_D	0.957	0.99
459_R	486_W	0.956	0.99
540_V	639_V	0.954	0.99
193_Q	197_D	0.949	0.99
125_A	596_G	0.949	0.99
230_N	411_V	0.948	0.99
635_F	638_A	0.947	0.99
199_R	224_H	0.944	0.99
361_L	365_D	0.944	0.99
230_N	410_P	0.938	0.99
118_V	127_I	0.937	0.99
81_R	192_Y	0.935	0.99
45_D	49_A	0.935	0.99
478_F	481_R	0.934	0.99
415_N	500_Y	0.933	0.99
229_A	461_P	0.932	0.99
141_V	147_R	0.931	0.99
76_L	104_C	0.931	0.99
598_E	601_E	0.926	0.99
199_R	203_D	0.923	0.99
229_A	462_Q	0.923	0.99
47_S	279_G	0.921	0.99
251_T	254_S	0.919	0.99
364_S	367_R	0.917	0.99
97_T	258_S	0.917	0.99
132_G	157_L	0.917	0.99
295_F	303_A	0.911	0.99
560_E	564_S	0.904	0.99
195_W	198_D	0.903	0.99
339_R	390_A	0.903	0.99
579_D	582_V	0.903	0.99
552_V	609_V	0.902	0.99
226_N	465_D	0.901	0.99
168_T	177_S	0.901	0.99
524_I	597_F	0.898	0.99
321_A	331_F	0.896	0.99
83_L	182_R	0.896	0.99
320_Q	369_A	0.895	0.99
60_G	297_L	0.894	0.99
286_E	294_D	0.890	0.99
64_L	103_Q	0.887	0.99
61_V	297_L	0.886	0.99
455_E	488_R	0.880	0.99
436_V	493_V	0.879	0.99
588_S	592_D	0.879	0.99
325_P	329_R	0.878	0.99
72_I	99_M	0.878	0.99
552_V	613_F	0.875	0.99
436_V	501_V	0.874	0.99
585_R	589_A	0.872	0.99
177_S	180_Y	0.871	0.99
57_P	69_L	0.870	0.99
536_Q	552_V	0.870	0.99
314_Y	391_L	0.868	0.99
63_T	281_Q	0.864	0.99
640_G	644_D	0.862	0.99
50_P	279_G	0.860	0.99
73_V	110_A	0.860	0.99
83_L	162_F	0.858	0.98
87_A	112_G	0.857	0.98
368_D	372_G	0.857	0.98
546_F	642_V	0.857	0.98
594_N	603_I	0.854	0.98
583_R	587_Q	0.853	0.98
132_G	159_D	0.852	0.98
209_Y	219_G	0.852	0.98
129_H	470_L	0.851	0.98
190_D	194_G	0.850	0.98
327_S	330_V	0.845	0.98
92_G	118_V	0.843	0.98
255_R	283_C	0.842	0.98
303_A	374_I	0.840	0.98
290_T	294_D	0.840	0.98
90_R	135_G	0.838	0.98
191_A	195_W	0.837	0.98
578_R	583_R	0.835	0.98
68_A	72_I	0.833	0.98
347_P	351_L	0.832	0.98
509_Q	626_K	0.832	0.98
427_P	500_Y	0.832	0.98
211_S	625_K	0.831	0.98
350_G	354_A	0.828	0.98
333_W	354_A	0.826	0.98
63_T	298_F	0.825	0.98
352_R	356_A	0.824	0.98
557_A	560_E	0.824	0.98
90_R	114_A	0.823	0.98
231_L	277_A	0.822	0.98
106_L	276_L	0.822	0.98
227_F	409_S	0.818	0.98
538_M	631_I	0.817	0.98
132_G	158_D	0.815	0.98
229_A	431_D	0.815	0.98
524_I	603_I	0.811	0.98
86_T	137_V	0.810	0.98
590_V	593_V	0.809	0.98
47_S	66_Y	0.808	0.98
570_P	575_A	0.808	0.98
402_G	410_P	0.808	0.98
301_T	375_E	0.807	0.98
269_L	410_P	0.806	0.98
86_T	195_W	0.801	0.98
523_P	601_E	0.800	0.98
77_A	107_A	0.799	0.98
338_G	342_H	0.796	0.98
355_H	363_F	0.795	0.98
39_Y	199_R	0.794	0.97
292_R	296_G	0.794	0.97
331_F	335_T	0.794	0.97
357_L	361_L	0.794	0.97
587_Q	590_V	0.793	0.97
132_G	216_T	0.793	0.97
70_R	110_A	0.792	0.97
57_P	99_M	0.789	0.97
194_G	197_D	0.789	0.97
415_N	424_T	0.788	0.97
165_T	169_P	0.788	0.97
337_V	351_L	0.788	0.97
267_E	271_G	0.788	0.97
538_M	613_F	0.786	0.97
133_D	468_W	0.786	0.97
55_P	281_Q	0.785	0.97
511_L	518_N	0.785	0.97
266_L	410_P	0.785	0.97
296_G	368_D	0.784	0.97
334_A	358_A	0.784	0.97
271_G	284_Y	0.781	0.97
416_P	500_Y	0.780	0.97
190_D	193_Q	0.780	0.97
603_I	606_F	0.779	0.97
337_V	354_A	0.777	0.97
293_E	296_G	0.777	0.97
334_A	362_V	0.774	0.97
349_I	353_A	0.774	0.97
104_C	176_L	0.772	0.97
531_S	534_V	0.771	0.97
412_L	434_L	0.769	0.97
266_L	381_G	0.768	0.97
609_V	635_F	0.768	0.97
101_W	262_L	0.768	0.97
589_A	593_V	0.768	0.97
330_V	362_V	0.767	0.97
119_Y	263_A	0.766	0.97
471_P	474_T	0.765	0.97
546_F	604_K	0.762	0.97
207_L	219_G	0.760	0.97
617_N	634_R	0.760	0.97
204_L	466_G	0.758	0.97
143_N	167_D	0.757	0.97
562_A	576_I	0.757	0.97
472_D	475_D	0.755	0.97
488_R	507_A	0.753	0.97
335_T	394_G	0.753	0.97
147_R	165_T	0.753	0.97
550_I	607_R	0.752	0.97
618_D	630_H	0.752	0.97
38_A	201_P	0.750	0.96
621_T	627_K	0.750	0.96
72_I	176_L	0.749	0.96
48_L	52_V	0.747	0.96
74_R	196_I	0.747	0.96
80_F	138_G	0.747	0.96
358_A	363_F	0.742	0.96
74_R	192_Y	0.741	0.96
205_A	227_F	0.741	0.96
584_A	587_Q	0.740	0.96
326_V	329_R	0.738	0.96
45_D	110_A	0.736	0.96
505_E	629_H	0.734	0.96
75_T	183_G	0.734	0.96
212_G	506_R	0.734	0.96
536_Q	620_L	0.733	0.96
559_S	563_A	0.731	0.96
211_S	506_R	0.731	0.96
611_T	634_R	0.730	0.96
326_V	330_V	0.728	0.96
83_L	164_A	0.726	0.96
558_V	562_A	0.725	0.96
611_T	635_F	0.724	0.96
79_G	183_G	0.722	0.96
56_A	276_L	0.720	0.96
78_A	193_Q	0.719	0.96
553_P	558_V	0.719	0.96
431_D	462_Q	0.718	0.95
463_V	487_F	0.717	0.95
575_A	578_R	0.716	0.95
617_N	620_L	0.714	0.95
389_C	401_E	0.714	0.95
39_Y	201_P	0.713	0.95
513_L	519_V	0.713	0.95
561_W	564_S	0.709	0.95
575_A	579_D	0.709	0.95
310_Y	399_I	0.709	0.95
511_L	541_G	0.708	0.95
125_A	128_A	0.707	0.95
539_V	549_A	0.706	0.95
250_V	254_S	0.705	0.95
592_D	595_T	0.704	0.95
95_A	101_W	0.702	0.95
614_T	618_D	0.700	0.95
256_H	275_P	0.700	0.95
637_D	640_G	0.698	0.95
519_V	547_V	0.697	0.95
95_A	142_E	0.696	0.95
524_I	593_V	0.692	0.94
227_F	273_F	0.691	0.94
478_F	486_W	0.688	0.94
59_G	62_E	0.688	0.94
493_V	503_F	0.687	0.94
109_L	273_F	0.686	0.94
45_D	74_R	0.686	0.94
45_D	197_D	0.686	0.94
424_T	496_R	0.685	0.94
505_E	522_G	0.684	0.94
225_R	465_D	0.684	0.94
514_S	545_K	0.684	0.94
337_V	340_A	0.683	0.94
582_V	586_I	0.683	0.94
85_V	111_A	0.682	0.94
64_L	68_A	0.681	0.94
131_L	139_V	0.679	0.94
93_V	101_W	0.678	0.94
381_G	623_T	0.678	0.94
222_L	409_S	0.678	0.94
364_S	368_D	0.678	0.94
125_A	216_T	0.678	0.94
85_V	137_V	0.678	0.94
388_L	392_F	0.675	0.94
583_R	607_R	0.675	0.94
436_V	504_L	0.675	0.94
178_A	182_R	0.675	0.94
405_L	477_A	0.675	0.94
255_R	298_F	0.674	0.94
205_A	224_H	0.673	0.94
132_G	156_D	0.672	0.94
57_P	103_Q	0.672	0.94
561_W	566_E	0.669	0.93
533_L	589_A	0.667	0.93
52_V	65_S	0.666	0.93
553_P	586_I	0.666	0.93
590_V	603_I	0.665	0.93
531_S	585_R	0.665	0.93
515_T	518_N	0.664	0.93
90_R	469_G	0.664	0.93
42_G	46_R	0.664	0.93
318_R	332_E	0.662	0.93
102_A	271_G	0.662	0.93
534_V	589_A	0.662	0.93
493_V	504_L	0.662	0.93
71_D	184_R	0.662	0.93
193_Q	196_I	0.660	0.93
577_C	610_A	0.660	0.93
583_R	608_L	0.660	0.93
353_A	357_L	0.660	0.93
51_E	279_G	0.657	0.93
534_V	551_L	0.656	0.93
311_E	388_L	0.656	0.93
579_D	583_R	0.656	0.93
286_E	290_T	0.655	0.93
457_L	478_F	0.654	0.93
573_R	577_C	0.652	0.93
115_V	268_R	0.652	0.93
348_G	351_L	0.648	0.92
94_F	120_A	0.648	0.92
591_D	606_F	0.647	0.92
157_L	160_L	0.647	0.92
79_G	83_L	0.646	0.92
367_R	397_L	0.645	0.92
393_H	420_P	0.645	0.92
560_E	563_A	0.644	0.92
583_R	605_Q	0.644	0.92
553_P	608_L	0.643	0.92
412_L	462_Q	0.643	0.92
251_T	375_E	0.642	0.92
104_C	166_M	0.641	0.92
305_S	309_V	0.640	0.92
114_A	207_L	0.639	0.92
316_T	319_E	0.638	0.92
365_D	368_D	0.638	0.92
265_V	410_P	0.637	0.92
353_A	356_A	0.636	0.92
200_D	225_R	0.636	0.92
135_G	468_W	0.635	0.92
293_E	297_L	0.633	0.91
537_A	549_A	0.633	0.91
383_S	386_P	0.633	0.91
424_T	500_Y	0.632	0.91
377_F	397_L	0.632	0.91
93_V	104_C	0.631	0.91
87_A	197_D	0.631	0.91
525_E	628_R	0.631	0.91
413_A	458_A	0.631	0.91
78_A	192_Y	0.631	0.91
556_D	559_S	0.631	0.91
259_F	305_S	0.629	0.91
94_F	149_R	0.629	0.91
129_H	132_G	0.629	0.91
232_N	277_A	0.629	0.91
235_R	274_L	0.628	0.91
559_S	573_R	0.628	0.91
69_L	276_L	0.627	0.91
412_L	432_T	0.627	0.91
351_L	355_H	0.626	0.91
400_L	417_Y	0.626	0.91
361_L	364_S	0.626	0.91
421_I	424_T	0.626	0.91
87_A	200_D	0.623	0.91
230_N	409_S	0.623	0.91
539_V	547_V	0.623	0.91
574_D	578_R	0.622	0.91
130_L	219_G	0.621	0.91
61_V	283_C	0.620	0.91
511_L	521_P	0.620	0.91
310_Y	379_S	0.620	0.91
63_T	283_C	0.619	0.91
148_Q	152_E	0.619	0.91
211_S	264_H	0.619	0.91
562_A	566_E	0.618	0.90
453_A	492_V	0.618	0.90
528_F	593_V	0.618	0.90
425_I	456_L	0.618	0.90
208_I	265_V	0.617	0.90
59_G	100_E	0.617	0.90
359_D	364_S	0.615	0.90
512_T	547_V	0.613	0.90
234_S	429_V	0.613	0.90
225_R	229_A	0.613	0.90
61_V	298_F	0.613	0.90
150_V	153_V	0.610	0.90
583_R	586_I	0.610	0.90
88_G	203_D	0.609	0.90
41_G	45_D	0.609	0.90
59_G	64_L	0.608	0.90
630_H	634_R	0.607	0.90
168_T	175_P	0.607	0.90
230_N	269_L	0.607	0.90
85_V	89_D	0.606	0.90
154_E	158_D	0.606	0.90
89_D	113_G	0.606	0.90
613_F	626_K	0.603	0.89
287_S	294_D	0.603	0.89
457_L	507_A	0.601	0.89
71_D	74_R	0.600	0.89
400_L	416_P	0.600	0.89
546_F	605_Q	0.599	0.89
356_A	360_T	0.599	0.89
318_R	321_A	0.599	0.89
291_L	309_V	0.599	0.89
510_L	518_N	0.597	0.89
94_F	139_V	0.597	0.89
229_A	233_Q	0.597	0.89
129_H	217_P	0.593	0.89
206_S	227_F	0.593	0.89
103_Q	176_L	0.593	0.89
201_P	224_H	0.593	0.89
355_H	359_D	0.592	0.88
154_E	160_L	0.592	0.88
148_Q	151_R	0.591	0.88
124_P	149_R	0.590	0.88
96_H	120_A	0.590	0.88
611_T	614_T	0.589	0.88
436_V	454_G	0.587	0.88
318_R	322_A	0.587	0.88
72_I	100_E	0.586	0.88
226_N	464_F	0.586	0.88
567_I	571_D	0.585	0.88
73_V	77_A	0.584	0.88
38_A	46_R	0.584	0.88
555_F	573_R	0.583	0.88
81_R	86_T	0.582	0.88
251_T	301_T	0.582	0.88
614_T	619_L	0.582	0.88
104_C	108_V	0.582	0.88
45_D	196_I	0.581	0.88
143_N	146_L	0.580	0.87
505_E	520_A	0.580	0.87
88_G	112_G	0.580	0.87
160_L	163_V	0.580	0.87
192_Y	195_W	0.580	0.87
85_V	108_V	0.580	0.87
350_G	353_A	0.577	0.87
424_T	494_E	0.577	0.87
571_D	576_I	0.577	0.87
261_P	264_H	0.577	0.87
288_P	292_R	0.576	0.87
153_V	156_D	0.576	0.87
292_R	316_T	0.575	0.87
210_T	506_R	0.575	0.87
454_G	492_V	0.574	0.87
227_F	265_V	0.574	0.87
552_V	612_E	0.573	0.87
158_D	161_E	0.573	0.87
527_A	597_F	0.571	0.87
40_K	224_H	0.571	0.87
80_F	104_C	0.571	0.87
324_S	331_F	0.571	0.87
619_L	635_F	0.570	0.87
81_R	191_A	0.569	0.86
201_P	232_N	0.568	0.86
177_S	184_R	0.568	0.86
120_A	263_A	0.568	0.86
474_T	486_W	0.568	0.86
435_T	486_W	0.567	0.86
162_F	174_R	0.566	0.86
105_D	109_L	0.566	0.86
229_A	232_N	0.565	0.86
577_C	586_I	0.565	0.86
69_L	73_V	0.564	0.86
527_A	530_A	0.561	0.86
258_S	271_G	0.561	0.86
218_K	625_K	0.559	0.86
524_I	547_V	0.559	0.86
98_R	166_M	0.558	0.85
270_S	304_T	0.558	0.85
588_S	591_D	0.558	0.85
79_G	180_Y	0.558	0.85
308_R	312_K	0.558	0.85
425_I	501_V	0.557	0.85
54_D	279_G	0.556	0.85
259_F	303_A	0.556	0.85
91_V	140_V	0.555	0.85
113_G	138_G	0.555	0.85
319_E	323_D	0.555	0.85
597_F	600_Y	0.555	0.85
335_T	338_G	0.554	0.85
382_G	543_G	0.554	0.85
526_D	529_A	0.553	0.85
79_G	82_D	0.553	0.85
211_S	214_T	0.553	0.85
329_R	332_E	0.552	0.85
506_R	625_K	0.552	0.85
562_A	565_Q	0.552	0.85
106_L	273_F	0.552	0.85
338_G	363_F	0.552	0.85
108_V	111_A	0.550	0.85
505_E	509_Q	0.550	0.85
633_D	637_D	0.550	0.85
509_Q	538_M	0.550	0.85
391_L	395_M	0.548	0.84
87_A	198_D	0.548	0.84
544_Q	643_Y	0.546	0.84
524_I	539_V	0.546	0.84
341_A	347_P	0.546	0.84
632_R	636_A	0.546	0.84
393_H	422_V	0.545	0.84
192_Y	196_I	0.544	0.84
510_L	520_A	0.544	0.84
466_G	487_F	0.544	0.84
256_H	280_A	0.542	0.84
474_T	477_A	0.542	0.84
212_G	218_K	0.542	0.84
174_R	178_A	0.540	0.84
230_N	412_L	0.539	0.83
428_P	495_L	0.538	0.83
232_N	236_R	0.538	0.83
574_D	610_A	0.537	0.83
511_L	543_G	0.537	0.83
49_A	53_V	0.537	0.83
435_T	482_E	0.537	0.83
356_A	359_D	0.536	0.83
413_A	428_P	0.535	0.83
381_G	401_E	0.535	0.83
41_G	110_A	0.535	0.83
207_L	221_A	0.533	0.83
115_V	206_S	0.532	0.83
470_L	474_T	0.532	0.83
211_S	218_K	0.531	0.82
118_V	130_L	0.531	0.82
401_E	415_N	0.530	0.82
400_L	414_V	0.530	0.82
621_T	625_K	0.529	0.82
131_L	134_S	0.528	0.82
74_R	78_A	0.527	0.82
165_T	168_T	0.527	0.82
180_Y	183_G	0.527	0.82
558_V	564_S	0.527	0.82
105_D	208_I	0.526	0.82
453_A	517_K	0.526	0.82
533_L	561_W	0.526	0.82
154_E	157_L	0.525	0.82
117_T	207_L	0.524	0.82
48_L	66_Y	0.524	0.82
338_G	355_H	0.523	0.82
133_D	219_G	0.522	0.81
331_F	338_G	0.522	0.81
302_S	376_F	0.521	0.81
618_D	627_K	0.521	0.81
412_L	489_T	0.521	0.81
398_P	418_E	0.520	0.81
233_Q	429_V	0.520	0.81
49_A	193_Q	0.519	0.81
455_E	507_A	0.519	0.81
123_S	126_Q	0.518	0.81
300_P	307_P	0.518	0.81
337_V	341_A	0.517	0.81
264_H	517_K	0.516	0.81
405_L	489_T	0.516	0.81
302_S	375_E	0.515	0.81
491_D	506_R	0.515	0.81
334_A	363_F	0.515	0.81
366_I	371_G	0.515	0.81
420_P	500_Y	0.514	0.80
275_P	282_V	0.513	0.80
473_A	477_A	0.513	0.80
570_P	579_D	0.512	0.80
421_I	502_R	0.512	0.80
545_K	548_S	0.512	0.80
347_P	352_R	0.512	0.80
58_D	61_V	0.512	0.80
480_T	486_W	0.511	0.80
534_V	537_A	0.511	0.80
618_D	633_D	0.510	0.80
325_P	330_V	0.510	0.80
563_A	566_E	0.510	0.80
110_A	192_Y	0.509	0.80
347_P	350_G	0.509	0.80
370_L	374_I	0.508	0.80
374_I	377_F	0.508	0.80
517_K	601_E	0.508	0.80
109_L	115_V	0.508	0.80
256_H	267_E	0.508	0.80
44_Y	69_L	0.507	0.80
544_Q	639_V	0.507	0.80
453_A	494_E	0.507	0.80
257_L	298_F	0.506	0.79
555_F	558_V	0.506	0.79
429_V	432_T	0.505	0.79
408_T	412_L	0.505	0.79
409_S	463_V	0.504	0.79
518_N	547_V	0.504	0.79
94_F	146_L	0.504	0.79
155_S	158_D	0.504	0.79
357_L	360_T	0.503	0.79
365_D	371_G	0.502	0.79
76_L	108_V	0.502	0.79
438_E	453_A	0.501	0.79
92_G	134_S	0.500	0.79
494_E	497_P	0.500	0.79

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3tsyA	2	0.66	100	0.375	Contact Map
1mdbA	1	0.8	100	0.39	Contact Map
3ni2A	1	0.7892	100	0.393	Contact Map
2d1sA	1	0.8046	100	0.393	Contact Map
3etcA	2	0.7862	100	0.396	Contact Map
1v25A	2	0.7385	100	0.396	Contact Map
1amuA	1	0.7585	100	0.396	Contact Map
1ry2A	1	0.8231	100	0.4	Contact Map
2v7bA	1	0.7385	100	0.401	Contact Map
3rixA	1	0.64	100	0.401	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0159 seconds.