Q9HNH6 - HALSA - GREMLIN Contacts

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Q9HNH6 - Threonine dehydratase

UniProt:	Q9HNH6	Sequences: MLSRCPVLRRPIPHGTIDHLIRSRDCGTGTRVPRLTKPPLAVSLSLRFDRFYVRGRPTDSCHTLRSRVLRRSPPTVKPGPRIPASMLSLSDIRDARERVSETARHTPLEYSHTFSDLTGADVRPKLECFQRTGSFKIRGATNRIRTLSADQQDAGVVTASAGNHAQGVALAASRSGVDSKVVMPESAPISKIKATKSYGAEVVLHGADYDDAQAHAHELEAAEGRTYVHAFDDEYIMAGQGTLGLEIAADCPTVDTVVVPIGGGGLISGVATALKGELDDVRVIGVQAEGASTVARSLDKGQPQAVDHVDTIADGIAVRQVGAQTFPVIQEHVDEVVTVSDDEIATALVLLLERGKTLVEGAGATALAAVLEDKFEYADGETIVPALCGGNIDLNLLTTVIVRGLVDQGRYVKIRTVLKDSPGSLNDLLATAAEERANIYAIQHDRTNRDIAMNATEVELDLETRGPEHVDRLLTRIQDEGFDVTVLNGPQIVSE	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	495 (395)
Sequences:	2924 (1655)
Seq/√Len:	83.3

ECOLI - ILVA
BACSU - ILVA
HALSA - Q9HNH6
SULSO - Q980P1

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
257_V	274_L	5.215	1.00
215_H	218_E	5.097	1.00
148_S	151_Q	4.371	1.00
267_I	333_V	4.173	1.00
121_D	382_T	3.887	1.00
295_A	299_D	3.764	1.00
305_A	320_Q	3.420	1.00
143_R	233_D	3.239	1.00
278_L	281_V	3.188	1.00
271_A	332_H	3.110	1.00
218_E	222_A	3.097	1.00
146_T	235_Y	3.052	1.00
247_I	384_V	3.042	1.00
105_H	250_D	3.012	1.00
289_E	340_S	2.946	1.00
172_A	179_S	2.828	1.00
178_D	201_E	2.657	1.00
180_K	201_E	2.628	1.00
105_H	249_A	2.528	1.00
98_R	142_N	2.511	1.00
292_S	338_T	2.506	1.00
324_Q	327_P	2.477	1.00
294_V	321_V	2.460	1.00
110_Y	121_D	2.425	1.00
232_D	323_A	2.410	1.00
182_V	219_L	2.393	1.00
149_A	152_Q	2.330	1.00
259_V	270_V	2.259	1.00
475_T	479_D	2.222	1.00
293_T	297_S	2.206	1.00
288_A	316_I	2.199	1.00
320_Q	323_A	2.181	1.00
173_S	179_S	2.162	1.00
149_A	153_D	2.128	1.00
275_K	334_D	2.097	1.00
298_L	336_V	2.076	1.00
316_I	362_A	2.069	1.00
108_L	251_C	2.059	1.00
267_I	329_I	2.033	1.00
180_K	225_R	2.001	1.00
123_R	382_T	1.983	1.00
292_S	296_R	1.976	1.00
296_R	299_D	1.947	1.00
294_V	336_V	1.941	1.00
343_E	372_E	1.940	1.00
300_K	304_Q	1.933	1.00
261_I	294_V	1.906	1.00
244_G	270_V	1.855	1.00
254_V	384_V	1.850	1.00
282_R	335_E	1.849	1.00
294_V	329_I	1.847	1.00
258_V	373_D	1.846	1.00
329_I	333_V	1.807	1.00
261_I	336_V	1.796	1.00
213_Q	217_H	1.785	1.00
270_V	386_A	1.785	1.00
122_V	370_V	1.770	1.00
431_T	480_E	1.763	1.00
90_S	93_R	1.753	1.00
295_A	338_T	1.728	1.00
245_L	273_A	1.728	1.00
215_H	219_L	1.721	1.00
152_Q	177_V	1.697	1.00
260_P	388_C	1.688	1.00
219_L	223_E	1.674	1.00
234_E	324_Q	1.671	1.00
151_Q	226_T	1.669	1.00
110_Y	123_R	1.659	1.00
316_I	365_T	1.653	1.00
209_Y	213_Q	1.643	1.00
366_A	385_P	1.638	1.00
244_G	274_L	1.638	1.00
217_H	220_E	1.634	1.00
471_D	475_T	1.627	1.00
178_D	225_R	1.621	1.00
359_V	387_L	1.611	1.00
159_A	209_Y	1.598	1.00
301_G	330_Q	1.583	1.00
253_T	382_T	1.583	1.00
208_D	211_D	1.583	1.00
313_A	344_I	1.561	1.00
237_M	328_V	1.554	1.00
102_T	141_T	1.549	1.00
247_I	254_V	1.548	1.00
107_P	129_F	1.546	1.00
328_V	332_H	1.544	1.00
296_R	304_Q	1.507	0.99
284_I	335_E	1.507	0.99
255_D	381_E	1.497	0.99
340_S	343_E	1.487	0.99
414_I	474_L	1.473	0.99
119_G	379_D	1.441	0.99
428_L	458_V	1.432	0.99
439_I	442_I	1.424	0.99
251_C	254_V	1.421	0.99
348_L	362_A	1.395	0.99
258_V	370_V	1.392	0.99
148_S	152_Q	1.377	0.99
244_G	247_I	1.372	0.99
229_H	233_D	1.362	0.99
292_S	295_A	1.357	0.99
296_R	300_K	1.347	0.99
348_L	392_I	1.335	0.99
219_L	225_R	1.326	0.99
438_N	442_I	1.320	0.99
256_T	381_E	1.312	0.98
201_E	223_E	1.311	0.98
168_V	181_V	1.310	0.98
120_A	381_E	1.293	0.98
205_H	215_H	1.289	0.98
285_G	294_V	1.286	0.98
297_S	303_P	1.285	0.98
157_V	225_R	1.283	0.98
295_A	336_V	1.279	0.98
254_V	281_V	1.278	0.98
91_D	94_D	1.278	0.98
426_N	430_A	1.262	0.98
151_Q	154_A	1.258	0.98
114_F	367_L	1.249	0.98
421_S	427_D	1.246	0.98
150_D	154_A	1.243	0.98
97_E	100_S	1.243	0.98
352_L	358_L	1.242	0.98
289_E	338_T	1.240	0.98
290_G	310_D	1.229	0.98
302_Q	326_F	1.226	0.98
183_M	204_L	1.226	0.98
261_I	267_I	1.224	0.98
303_P	320_Q	1.218	0.98
267_I	283_V	1.209	0.97
326_F	330_Q	1.203	0.97
173_S	200_A	1.199	0.97
297_S	321_V	1.197	0.97
432_A	460_L	1.175	0.97
427_D	480_E	1.174	0.97
450_D	456_T	1.173	0.97
144_I	175_S	1.172	0.97
144_I	177_V	1.171	0.97
259_V	283_V	1.166	0.97
303_P	323_A	1.165	0.97
89_L	93_R	1.163	0.97
144_I	168_V	1.154	0.97
142_N	146_T	1.153	0.97
313_A	362_A	1.153	0.97
424_S	427_D	1.151	0.97
187_A	314_D	1.148	0.96
255_D	380_G	1.147	0.96
123_R	251_C	1.145	0.96
182_V	205_H	1.143	0.96
98_R	145_R	1.140	0.96
257_V	270_V	1.135	0.96
439_I	443_Q	1.134	0.96
440_Y	445_D	1.132	0.96
288_A	291_A	1.129	0.96
255_D	382_T	1.128	0.96
92_I	273_A	1.125	0.96
327_P	331_E	1.120	0.96
207_A	211_D	1.120	0.96
143_R	228_V	1.120	0.96
327_P	330_Q	1.119	0.96
335_E	376_E	1.109	0.96
150_D	153_D	1.108	0.96
474_L	478_Q	1.104	0.96
185_E	207_A	1.103	0.96
147_L	151_Q	1.103	0.96
173_S	198_Y	1.102	0.96
256_T	282_R	1.099	0.95
178_D	223_E	1.094	0.95
143_R	229_H	1.093	0.95
478_Q	484_V	1.091	0.95
108_L	384_V	1.090	0.95
180_K	203_V	1.086	0.95
255_D	383_I	1.086	0.95
293_T	321_V	1.085	0.95
417_V	483_D	1.082	0.95
122_V	374_K	1.074	0.95
272_T	328_V	1.072	0.95
168_V	177_V	1.071	0.95
439_I	446_R	1.069	0.95
114_F	124_P	1.068	0.95
442_I	446_R	1.062	0.95
158_T	181_V	1.061	0.94
344_I	365_T	1.059	0.94
346_T	404_G	1.058	0.94
154_A	224_G	1.058	0.94
243_L	266_L	1.054	0.94
243_L	270_V	1.051	0.94
392_I	400_V	1.050	0.94
468_E	471_D	1.050	0.94
274_L	281_V	1.048	0.94
323_A	327_P	1.046	0.94
248_A	278_L	1.046	0.94
99_V	141_T	1.038	0.94
248_A	274_L	1.034	0.94
437_A	473_L	1.033	0.94
438_N	441_A	1.033	0.94
441_A	445_D	1.019	0.93
351_L	359_V	1.017	0.93
287_Q	321_V	1.016	0.93
216_A	227_Y	1.014	0.93
370_V	374_K	1.009	0.93
442_I	445_D	1.009	0.93
124_P	385_P	1.001	0.93
213_Q	229_H	0.997	0.92
193_K	196_K	0.993	0.92
237_M	324_Q	0.990	0.92
284_I	337_V	0.985	0.92
306_V	309_V	0.985	0.92
348_L	400_V	0.982	0.92
271_A	283_V	0.981	0.92
290_G	341_D	0.979	0.92
270_V	274_L	0.978	0.92
437_A	440_Y	0.977	0.92
430_A	434_E	0.975	0.92
120_A	383_I	0.974	0.92
256_T	284_I	0.973	0.91
96_R	249_A	0.966	0.91
247_I	257_V	0.965	0.91
437_A	441_A	0.963	0.91
467_P	471_D	0.959	0.91
238_A	241_G	0.953	0.91
287_Q	295_A	0.952	0.91
180_K	219_L	0.951	0.91
183_M	195_T	0.951	0.91
259_V	267_I	0.946	0.90
288_A	344_I	0.943	0.90
313_A	316_I	0.937	0.90
158_T	227_Y	0.936	0.90
268_S	328_V	0.930	0.90
290_G	309_V	0.929	0.90
437_A	442_I	0.927	0.89
367_L	370_V	0.921	0.89
124_P	387_L	0.920	0.89
93_R	277_E	0.920	0.89
213_Q	227_Y	0.917	0.89
260_P	366_A	0.917	0.89
267_I	285_G	0.915	0.89
154_A	226_T	0.915	0.89
203_V	215_H	0.913	0.89
432_A	437_A	0.913	0.89
478_Q	483_D	0.911	0.89
121_D	380_G	0.906	0.88
350_L	371_L	0.902	0.88
464_T	470_V	0.902	0.88
157_V	220_E	0.900	0.88
147_L	226_T	0.898	0.88
438_N	443_Q	0.896	0.88
440_Y	443_Q	0.896	0.88
424_S	428_L	0.894	0.88
258_V	337_V	0.894	0.88
441_A	446_R	0.887	0.87
261_I	285_G	0.886	0.87
118_T	122_V	0.883	0.87
429_L	458_V	0.879	0.87
104_R	130_Q	0.876	0.87
439_I	445_D	0.875	0.86
351_L	387_L	0.867	0.86
189_I	193_K	0.863	0.86
335_E	373_D	0.860	0.86
475_T	478_Q	0.859	0.85
397_L	414_I	0.859	0.85
143_R	151_Q	0.843	0.84
291_A	306_V	0.841	0.84
305_A	319_R	0.837	0.84
209_Y	229_H	0.833	0.84
214_A	218_E	0.832	0.84
476_R	479_D	0.830	0.83
210_D	291_A	0.826	0.83
143_R	235_Y	0.826	0.83
170_L	174_R	0.820	0.83
472_R	476_R	0.819	0.83
98_R	146_T	0.812	0.82
124_P	359_V	0.811	0.82
285_G	333_V	0.808	0.82
409_G	470_V	0.807	0.82
349_V	394_L	0.805	0.82
260_P	316_I	0.804	0.81
211_D	319_R	0.803	0.81
234_E	238_A	0.795	0.81
158_T	229_H	0.795	0.81
435_E	476_R	0.795	0.81
153_D	479_D	0.793	0.81
116_D	197_S	0.793	0.81
237_M	272_T	0.792	0.81
93_R	96_R	0.791	0.80
187_A	190_S	0.791	0.80
182_V	215_H	0.791	0.80
440_Y	446_R	0.788	0.80
297_S	359_V	0.788	0.80
443_Q	446_R	0.788	0.80
143_R	146_T	0.787	0.80
210_D	231_F	0.786	0.80
298_L	329_I	0.784	0.80
297_S	326_F	0.781	0.80
471_D	478_Q	0.781	0.80
220_E	227_Y	0.781	0.80
112_H	116_D	0.781	0.80
345_A	403_R	0.779	0.79
464_T	469_H	0.773	0.79
431_T	476_R	0.772	0.79
298_L	330_Q	0.769	0.79
244_G	273_A	0.768	0.78
438_N	446_R	0.767	0.78
107_P	126_L	0.767	0.78
468_E	472_R	0.766	0.78
474_L	484_V	0.766	0.78
231_F	320_Q	0.766	0.78
418_L	424_S	0.764	0.78
261_I	298_L	0.760	0.78
99_V	134_S	0.760	0.78
141_T	174_R	0.759	0.78
152_Q	155_G	0.758	0.78
275_K	283_V	0.757	0.77
187_A	230_A	0.756	0.77
426_N	429_L	0.754	0.77
157_V	219_L	0.752	0.77
147_L	152_Q	0.747	0.76
258_V	369_A	0.740	0.76
148_S	226_T	0.738	0.76
353_E	410_R	0.736	0.75
217_H	221_A	0.734	0.75
416_T	428_L	0.733	0.75
194_A	354_R	0.731	0.75
293_T	296_R	0.731	0.75
147_L	155_G	0.731	0.75
108_L	247_I	0.730	0.75
245_L	249_A	0.725	0.74
196_K	202_V	0.724	0.74
209_Y	230_A	0.722	0.74
438_N	445_D	0.721	0.74
203_V	219_L	0.715	0.73
157_V	182_V	0.714	0.73
186_S	207_A	0.714	0.73
135_F	260_P	0.713	0.73
312_I	461_D	0.712	0.73
321_V	329_I	0.711	0.73
437_A	443_Q	0.710	0.73
182_V	212_A	0.710	0.73
89_L	276_G	0.710	0.73
414_I	462_L	0.710	0.73
465_R	469_H	0.708	0.73
237_M	325_T	0.708	0.73
370_V	385_P	0.705	0.72
185_E	205_H	0.705	0.72
171_A	175_S	0.704	0.72
99_V	103_A	0.701	0.72
96_R	245_L	0.700	0.72
111_S	355_G	0.700	0.72
422_P	444_H	0.699	0.72
196_K	201_E	0.697	0.71
90_S	94_D	0.696	0.71
251_C	382_T	0.696	0.71
156_V	177_V	0.693	0.71
99_V	145_R	0.692	0.71
312_I	341_D	0.690	0.71
233_D	236_I	0.690	0.71
182_V	203_V	0.689	0.71
116_D	119_G	0.689	0.71
161_A	164_H	0.689	0.71
243_L	247_I	0.683	0.70
424_S	458_V	0.683	0.70
210_D	287_Q	0.682	0.70
248_A	252_P	0.682	0.70
365_T	388_C	0.679	0.69
179_S	200_A	0.679	0.69
218_E	221_A	0.678	0.69
150_D	331_E	0.676	0.69
275_K	333_V	0.673	0.69
272_T	332_H	0.671	0.69
287_Q	298_L	0.669	0.68
443_Q	459_E	0.665	0.68
229_H	325_T	0.665	0.68
180_K	223_E	0.663	0.68
258_V	286_V	0.662	0.67
259_V	333_V	0.661	0.67
292_S	306_V	0.660	0.67
273_A	277_E	0.660	0.67
446_R	450_D	0.657	0.67
261_I	287_Q	0.657	0.67
137_I	171_A	0.656	0.67
274_L	334_D	0.655	0.67
152_Q	175_S	0.655	0.67
411_Y	440_Y	0.654	0.67
170_L	173_S	0.653	0.66
335_E	338_T	0.651	0.66
367_L	387_L	0.649	0.66
412_V	470_V	0.649	0.66
395_N	401_I	0.649	0.66
166_Q	240_Q	0.648	0.66
113_T	354_R	0.647	0.66
135_F	243_L	0.646	0.66
153_D	299_D	0.642	0.65
131_R	170_L	0.642	0.65
272_T	276_G	0.642	0.65
94_D	97_E	0.641	0.65
282_R	381_E	0.641	0.65
374_K	377_Y	0.640	0.65
89_L	245_L	0.639	0.65
260_P	268_S	0.635	0.64
299_D	335_E	0.634	0.64
446_R	456_T	0.632	0.64
306_V	310_D	0.631	0.64
297_S	304_Q	0.630	0.64
450_D	457_E	0.628	0.63
442_I	458_V	0.626	0.63
199_G	388_C	0.626	0.63
343_E	371_L	0.625	0.63
426_N	433_A	0.624	0.63
300_K	303_P	0.624	0.63
329_I	336_V	0.623	0.63
294_V	326_F	0.622	0.63
157_V	215_H	0.620	0.62
124_P	367_L	0.619	0.62
442_I	451_I	0.619	0.62
247_I	274_L	0.617	0.62
285_G	336_V	0.617	0.62
275_K	279_D	0.615	0.62
148_S	155_G	0.613	0.62
118_T	374_K	0.610	0.61
358_L	397_L	0.609	0.61
114_F	118_T	0.609	0.61
451_I	456_T	0.607	0.61
429_L	439_I	0.606	0.61
99_V	102_T	0.606	0.61
244_G	283_V	0.604	0.60
207_A	288_A	0.602	0.60
437_A	462_L	0.602	0.60
243_L	386_A	0.601	0.60
135_F	355_G	0.599	0.60
397_L	486_V	0.599	0.60
128_C	357_T	0.598	0.60
208_D	309_V	0.598	0.60
312_I	396_L	0.597	0.60
287_Q	316_I	0.595	0.59
437_A	469_H	0.594	0.59
251_C	384_V	0.594	0.59
167_G	240_Q	0.594	0.59
117_L	350_L	0.593	0.59
178_D	282_R	0.593	0.59
208_D	319_R	0.592	0.59
192_I	204_L	0.591	0.59
155_G	225_R	0.591	0.59
159_A	231_F	0.590	0.59
287_Q	291_A	0.589	0.59
148_S	178_D	0.589	0.59
470_V	486_V	0.588	0.58
126_L	357_T	0.588	0.58
347_A	367_L	0.586	0.58
287_Q	297_S	0.585	0.58
232_D	303_P	0.585	0.58
466_G	469_H	0.584	0.58
152_Q	226_T	0.584	0.58
428_L	462_L	0.582	0.58
200_A	464_T	0.581	0.57
194_A	197_S	0.581	0.57
103_A	130_Q	0.581	0.57
353_E	404_G	0.580	0.57
314_D	367_L	0.579	0.57
414_I	477_I	0.579	0.57
346_T	408_Q	0.578	0.57
435_E	472_R	0.578	0.57
337_V	373_D	0.577	0.57
428_L	460_L	0.577	0.57
442_I	447_T	0.577	0.57
168_V	227_Y	0.577	0.57
442_I	450_D	0.576	0.57
113_T	350_L	0.576	0.57
409_G	467_P	0.574	0.57
332_H	335_E	0.573	0.56
340_S	372_E	0.572	0.56
291_A	309_V	0.571	0.56
95_A	98_R	0.570	0.56
253_T	278_L	0.568	0.56
248_A	273_A	0.567	0.56
274_L	278_L	0.565	0.55
288_A	313_A	0.565	0.55
345_A	361_G	0.563	0.55
416_T	484_V	0.563	0.55
91_D	235_Y	0.563	0.55
164_H	240_Q	0.563	0.55
299_D	472_R	0.562	0.55
103_A	137_I	0.561	0.55
151_Q	155_G	0.560	0.55
367_L	385_P	0.560	0.55
346_T	350_L	0.559	0.55
119_G	224_G	0.559	0.55
347_A	368_A	0.557	0.54
97_E	101_E	0.557	0.54
271_A	333_V	0.557	0.54
361_G	395_N	0.555	0.54
277_E	281_V	0.555	0.54
209_Y	231_F	0.555	0.54
167_G	209_Y	0.554	0.54
124_P	314_D	0.554	0.54
105_H	130_Q	0.554	0.54
287_Q	293_T	0.553	0.54
258_V	375_F	0.552	0.54
476_R	480_E	0.551	0.54
194_A	356_K	0.549	0.53
304_Q	326_F	0.548	0.53
394_L	404_G	0.547	0.53
174_R	462_L	0.547	0.53
347_A	371_L	0.547	0.53
337_V	369_A	0.545	0.53
405_L	410_R	0.545	0.53
99_V	135_F	0.545	0.53
438_N	444_H	0.544	0.53
443_Q	450_D	0.544	0.53
425_L	460_L	0.544	0.53
183_M	206_G	0.544	0.53
329_I	332_H	0.544	0.53
314_D	385_P	0.543	0.53
178_D	222_A	0.542	0.52
353_E	466_G	0.542	0.52
435_E	439_I	0.541	0.52
380_G	383_I	0.541	0.52
166_Q	210_D	0.540	0.52
141_T	145_R	0.540	0.52
415_R	459_E	0.539	0.52
429_L	442_I	0.538	0.52
435_E	473_L	0.538	0.52
240_Q	263_G	0.538	0.52
341_D	463_E	0.538	0.52
472_R	479_D	0.537	0.52
173_S	176_G	0.537	0.52
462_L	473_L	0.535	0.51
271_A	275_K	0.535	0.51
294_V	298_L	0.535	0.51
254_V	382_T	0.534	0.51
185_E	211_D	0.534	0.51
260_P	362_A	0.534	0.51
210_D	319_R	0.533	0.51
373_D	377_Y	0.532	0.51
349_V	404_G	0.531	0.51
221_A	472_R	0.531	0.51
335_E	479_D	0.530	0.51
427_D	430_A	0.530	0.51
348_L	364_A	0.529	0.51
96_R	100_S	0.528	0.51
232_D	322_G	0.528	0.51
299_D	302_Q	0.528	0.51
137_I	170_L	0.527	0.50
230_A	318_V	0.527	0.50
231_F	409_G	0.527	0.50
293_T	338_T	0.527	0.50
177_V	392_I	0.526	0.50
108_L	250_D	0.526	0.50
422_P	477_I	0.525	0.50
321_V	336_V	0.525	0.50
374_K	383_I	0.524	0.50
232_D	332_H	0.523	0.50
345_A	365_T	0.522	0.50
209_Y	319_R	0.521	0.50
256_T	278_L	0.520	0.49
427_D	434_E	0.520	0.49
415_R	457_E	0.519	0.49
313_A	345_A	0.519	0.49
442_I	456_T	0.519	0.49
120_A	380_G	0.516	0.49
399_T	404_G	0.515	0.49
421_S	473_L	0.515	0.49
427_D	431_T	0.514	0.49
143_R	156_V	0.513	0.49
135_F	271_A	0.513	0.49
359_V	392_I	0.513	0.49
118_T	370_V	0.513	0.49
134_S	366_A	0.513	0.49
418_L	456_T	0.512	0.48
432_A	447_T	0.512	0.48
267_I	270_V	0.512	0.48
153_D	214_A	0.512	0.48
470_V	474_L	0.511	0.48
429_L	473_L	0.511	0.48
131_R	354_R	0.511	0.48
436_R	469_H	0.511	0.48
153_D	226_T	0.510	0.48
445_D	448_N	0.509	0.48
350_L	355_G	0.509	0.48
205_H	218_E	0.508	0.48
302_Q	323_A	0.508	0.48
194_A	198_Y	0.508	0.48
186_S	288_A	0.507	0.48
116_D	214_A	0.506	0.48
250_D	348_L	0.506	0.48
164_H	263_G	0.506	0.48
234_E	237_M	0.505	0.47
284_I	376_E	0.503	0.47
232_D	325_T	0.503	0.47
261_I	329_I	0.502	0.47
210_D	214_A	0.502	0.47
328_V	331_E	0.501	0.47
257_V	384_V	0.500	0.47

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1tdjA	2	0.8303	100	0.366	Contact Map
2gn0A	2	0.6626	100	0.537	Contact Map
3ss7X	1	0.7212	100	0.538	Contact Map
1v71A	2	0.6424	100	0.546	Contact Map
3iauA	1	0.7152	100	0.553	Contact Map
1ve5A	3	0.6121	100	0.561	Contact Map
3l6bA	2	0.6424	100	0.563	Contact Map
2rkbA	2	0.6202	100	0.575	Contact Map
4d9iA	2	0.6869	100	0.576	Contact Map
4h27A	1	0.6182	100	0.578	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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