Q9HNF6 - HALSA - GREMLIN Contacts

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Q9HNF6 - Uncharacterized protein

UniProt:	Q9HNF6	Sequences: MASYGVLALVPPLLAIVLAMTTRQVLVSLFAGVWAGALVVAQWNPIAATALTMDWLVAVVRTPFNTKFIVLILFMGAGAAFIYRSGGILALERWIGSRISTARESQILTWLIGVFIFFDSYTSTVVTGNATRELAQDADSSREMHAYVLDSTTAPVTTFGPVSNWIGYQVSMIIAGLEAARVSAAELGTTPFGLFLQSIPWNIYCFMAFFMVGFITITQRFFGPMLDAEWRARTTGDTIADGATPLSDVSNDVGDPSTANPSLLNFFGPIAVLLAVGLGSMWYLGGGYKPGVDIATALQETDVAMGLLHGAFAFMVSGFVGALAYGTMDLEGATDTIVDGFKTMNIALAIIVLAWGIGMAAEKVGTADFIVTTLVGSGVPAGFLPLLVFLAAMFVAFTTGTSWGTMAILTPVAIPLGYNLAGAAVLPVLVGVLFGGAIWGDHSSPISDTTVMSSIFAGSDHIDHVTTQIPFAATAAGVTIVMLVLYAVGLRSPVVALPLATVLTLGAVVVLNKLDTRRKGLPEVMPRADAVDEADREAAANGTLSLPAAATSYDYLSLVPVAAVGIVLLYLSLVFVFAALGG	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	582 (494)
Sequences:	1155 (820)
Seq/√Len:	36.9

HALSA - Q9HNF6 Q9HNR2

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
386_L	480_I	6.170	1.00
237_D	241_D	4.846	1.00
265_N	325_Y	4.777	1.00
222_F	474_T	4.465	1.00
473_A	477_G	4.420	1.00
392_A	409_L	4.266	1.00
36_G	360_A	3.825	1.00
102_A	233_R	3.773	1.00
143_E	228_A	3.751	1.00
272_V	317_S	3.716	1.00
230_W	234_T	3.696	1.00
454_S	461_H	3.378	1.00
149_L	457_A	3.194	1.00
147_Y	208_A	3.095	1.00
277_G	310_G	3.047	1.00
78_G	314_F	3.036	1.00
10_V	14_L	2.976	1.00
144_M	221_F	2.855	1.00
435_G	483_L	2.852	1.00
211_M	475_A	2.825	1.00
268_G	321_G	2.809	1.00
226_L	230_W	2.669	1.00
293_D	296_T	2.652	1.00
136_Q	142_R	2.650	1.00
80_A	336_T	2.618	1.00
284_L	306_G	2.589	1.00
101_T	104_E	2.565	1.00
103_R	106_Q	2.548	1.00
369_F	373_T	2.547	1.00
203_I	482_M	2.506	1.00
264_L	268_G	2.488	1.00
44_N	47_A	2.435	1.00
77_A	337_I	2.418	1.00
207_M	500_A	2.395	1.00
100_S	104_E	2.365	1.00
103_R	216_T	2.336	1.00
44_N	48_A	2.335	1.00
109_T	148_V	2.292	0.99
168_Y	407_A	2.242	0.99
101_T	138_A	2.181	0.99
231_R	236_G	2.151	0.99
113_G	116_I	2.124	0.99
482_M	500_A	2.085	0.99
386_L	484_V	2.060	0.99
105_S	140_S	2.002	0.99
144_M	229_E	1.986	0.98
272_V	276_V	1.983	0.98
102_A	229_E	1.983	0.98
42_Q	45_P	1.962	0.98
168_Y	172_M	1.920	0.98
486_Y	489_G	1.918	0.98
503_L	507_A	1.917	0.98
146_A	459_S	1.914	0.98
14_L	35_A	1.911	0.98
22_T	28_S	1.900	0.98
322_A	328_M	1.892	0.98
155_P	442_H	1.889	0.98
506_G	509_V	1.889	0.98
45_P	48_A	1.881	0.98
35_A	39_V	1.856	0.98
431_G	435_G	1.839	0.97
339_D	342_K	1.829	0.97
84_R	336_T	1.808	0.97
365_G	368_D	1.795	0.97
276_V	313_A	1.794	0.97
110_W	213_G	1.783	0.97
203_I	496_A	1.771	0.97
367_A	371_V	1.770	0.97
107_I	111_L	1.736	0.96
18_L	28_S	1.718	0.96
204_Y	442_H	1.714	0.96
107_I	216_T	1.710	0.96
329_D	332_G	1.710	0.96
439_W	476_A	1.700	0.96
4_Y	39_V	1.698	0.96
119_D	164_N	1.694	0.96
284_L	301_T	1.668	0.95
421_A	424_A	1.666	0.95
116_I	123_S	1.666	0.95
89_L	93_R	1.660	0.95
401_T	404_G	1.655	0.95
370_I	391_A	1.652	0.95
267_F	271_A	1.642	0.95
198_S	430_V	1.641	0.95
75_M	164_N	1.635	0.95
113_G	123_S	1.610	0.94
6_V	369_F	1.590	0.94
410_T	433_L	1.589	0.94
388_V	413_A	1.575	0.94
38_L	48_A	1.573	0.94
450_T	465_V	1.569	0.94
240_A	463_D	1.564	0.94
102_A	143_E	1.537	0.93
107_I	217_I	1.528	0.93
150_D	442_H	1.528	0.93
152_T	155_P	1.525	0.93
64_F	304_A	1.521	0.93
143_E	463_D	1.510	0.92
125_V	456_F	1.507	0.92
215_I	222_F	1.500	0.92
26_L	349_A	1.494	0.92
477_G	481_V	1.493	0.92
286_G	297_A	1.487	0.92
54_D	58_A	1.482	0.92
390_L	394_F	1.474	0.91
143_E	229_E	1.472	0.91
38_L	43_W	1.469	0.91
151_S	208_A	1.465	0.91
390_L	480_I	1.452	0.91
214_F	218_T	1.437	0.90
207_M	475_A	1.404	0.89
158_T	169_Q	1.400	0.89
18_L	31_A	1.399	0.89
206_F	210_F	1.396	0.89
374_L	391_A	1.396	0.89
141_S	229_E	1.396	0.89
87_G	269_P	1.395	0.89
276_V	314_F	1.386	0.88
439_W	473_A	1.382	0.88
69_I	320_V	1.380	0.88
121_Y	163_S	1.373	0.88
442_H	468_Q	1.369	0.88
386_L	487_A	1.367	0.88
506_G	510_V	1.367	0.88
280_S	306_G	1.365	0.88
232_A	236_G	1.363	0.88
396_A	462_I	1.362	0.88
120_S	123_S	1.353	0.87
10_V	35_A	1.348	0.87
204_Y	468_Q	1.348	0.87
493_P	496_A	1.347	0.87
213_G	217_I	1.340	0.87
228_A	463_D	1.340	0.87
7_L	39_V	1.338	0.87
166_I	170_V	1.337	0.87
169_Q	406_M	1.333	0.86
402_S	441_D	1.332	0.86
443_S	454_S	1.328	0.86
91_L	161_P	1.322	0.86
19_A	153_T	1.321	0.86
85_S	322_A	1.318	0.86
105_S	138_A	1.315	0.86
158_T	205_C	1.313	0.86
237_D	243_A	1.312	0.86
268_G	317_S	1.309	0.85
319_F	333_A	1.308	0.85
464_H	467_T	1.307	0.85
202_N	435_G	1.300	0.85
150_D	154_A	1.299	0.85
176_G	414_I	1.297	0.85
7_L	10_V	1.287	0.84
34_W	48_A	1.283	0.84
193_G	197_Q	1.267	0.83
485_L	489_G	1.263	0.83
122_T	266_F	1.262	0.83
464_H	468_Q	1.259	0.83
358_G	362_E	1.257	0.83
123_S	127_T	1.256	0.83
8_A	366_T	1.255	0.83
441_D	449_T	1.238	0.82
169_Q	202_N	1.229	0.82
484_V	487_A	1.225	0.81
382_G	488_V	1.224	0.81
263_L	267_F	1.223	0.81
109_T	475_A	1.216	0.81
64_F	302_D	1.208	0.80
105_S	135_A	1.208	0.80
123_S	164_N	1.205	0.80
290_P	293_D	1.200	0.80
380_P	383_F	1.196	0.80
203_I	485_L	1.196	0.80
73_L	348_L	1.195	0.80
200_P	497_L	1.189	0.79
88_I	92_E	1.187	0.79
231_R	241_D	1.185	0.79
358_G	407_A	1.181	0.79
494_V	498_P	1.180	0.79
120_S	154_A	1.180	0.79
475_A	479_T	1.177	0.79
203_I	492_S	1.173	0.78
413_A	433_L	1.167	0.78
151_S	212_V	1.166	0.78
71_L	403_W	1.160	0.78
498_P	502_V	1.158	0.78
406_M	437_A	1.155	0.77
76_G	344_M	1.155	0.77
109_T	131_T	1.153	0.77
241_D	244_T	1.152	0.77
215_I	221_F	1.146	0.77
205_C	406_M	1.143	0.77
5_G	39_V	1.143	0.77
99_I	105_S	1.139	0.76
135_A	140_S	1.133	0.76
150_D	450_T	1.129	0.76
478_V	507_A	1.127	0.76
406_M	410_T	1.124	0.75
192_F	196_L	1.124	0.75
121_Y	154_A	1.124	0.75
79_A	131_T	1.123	0.75
229_E	232_A	1.123	0.75
78_G	315_M	1.120	0.75
402_S	447_S	1.116	0.75
196_L	199_I	1.109	0.74
492_S	496_A	1.109	0.74
310_G	314_F	1.107	0.74
202_N	205_C	1.102	0.74
496_A	499_L	1.100	0.74
384_L	437_A	1.100	0.74
243_A	460_D	1.098	0.74
120_S	163_S	1.098	0.74
122_T	161_P	1.098	0.74
119_D	163_S	1.095	0.73
43_W	48_A	1.091	0.73
169_Q	410_T	1.090	0.73
478_V	504_T	1.089	0.73
150_D	468_Q	1.087	0.73
150_D	204_Y	1.080	0.72
166_I	406_M	1.068	0.72
122_T	202_N	1.067	0.71
146_A	457_A	1.067	0.71
263_L	266_F	1.066	0.71
228_A	231_R	1.052	0.70
228_A	467_T	1.050	0.70
71_L	167_G	1.048	0.70
207_M	478_V	1.048	0.70
124_T	149_L	1.048	0.70
73_L	341_F	1.035	0.69
507_A	511_L	1.030	0.69
131_T	166_I	1.029	0.69
99_I	134_L	1.020	0.68
53_M	56_L	1.017	0.68
120_S	471_F	1.017	0.68
280_S	309_H	1.010	0.67
243_A	246_L	1.010	0.67
383_F	386_L	1.009	0.67
51_L	363_K	1.005	0.67
94_W	98_R	0.998	0.66
140_S	144_M	0.993	0.66
154_A	442_H	0.990	0.66
150_D	155_P	0.989	0.66
99_I	104_E	0.989	0.66
154_A	471_F	0.985	0.65
474_T	507_A	0.982	0.65
359_M	363_K	0.981	0.65
174_I	191_P	0.979	0.65
207_M	501_T	0.977	0.65
52_T	391_A	0.977	0.65
13_L	246_L	0.977	0.65
360_A	390_L	0.976	0.64
323_L	326_G	0.973	0.64
453_S	457_A	0.973	0.64
498_P	501_T	0.972	0.64
110_W	148_V	0.971	0.64
144_M	487_A	0.969	0.64
150_D	453_S	0.965	0.64
166_I	169_Q	0.964	0.64
314_F	318_G	0.964	0.64
289_K	292_V	0.962	0.63
509_V	512_N	0.960	0.63
203_I	479_T	0.960	0.63
52_T	272_V	0.955	0.63
87_G	90_A	0.955	0.63
122_T	406_M	0.947	0.62
244_T	248_D	0.946	0.62
72_I	157_T	0.943	0.62
231_R	238_T	0.931	0.61
302_D	305_M	0.930	0.61
101_T	275_A	0.925	0.60
15_A	32_G	0.921	0.60
110_W	216_T	0.918	0.60
214_F	493_P	0.917	0.60
461_H	465_V	0.917	0.60
501_T	505_L	0.917	0.60
122_T	195_F	0.917	0.60
10_V	39_V	0.915	0.59
148_V	212_V	0.914	0.59
19_A	129_N	0.914	0.59
335_D	498_P	0.913	0.59
329_D	506_G	0.907	0.59
317_S	320_V	0.899	0.58
495_V	503_L	0.899	0.58
152_T	156_V	0.899	0.58
399_T	404_G	0.897	0.58
328_M	333_A	0.896	0.58
489_G	496_A	0.894	0.58
454_S	465_V	0.890	0.57
194_L	427_P	0.888	0.57
40_V	156_V	0.887	0.57
139_D	226_L	0.886	0.57
164_N	167_G	0.883	0.57
202_N	266_F	0.883	0.57
157_T	161_P	0.882	0.57
6_V	39_V	0.881	0.56
72_I	266_F	0.880	0.56
320_V	324_A	0.880	0.56
150_D	464_H	0.878	0.56
481_V	498_P	0.878	0.56
72_I	348_L	0.877	0.56
271_A	390_L	0.875	0.56
225_M	471_F	0.873	0.56
17_V	431_G	0.872	0.56
144_M	215_I	0.870	0.56
495_V	498_P	0.870	0.56
442_H	464_H	0.870	0.56
9_L	159_F	0.867	0.55
75_M	347_A	0.864	0.55
171_S	398_T	0.864	0.55
124_T	153_T	0.862	0.55
103_R	219_Q	0.860	0.55
231_R	237_D	0.858	0.54
155_P	468_Q	0.857	0.54
272_V	314_F	0.857	0.54
17_V	21_T	0.857	0.54
441_D	465_V	0.856	0.54
485_L	499_L	0.855	0.54
501_T	504_T	0.853	0.54
103_R	480_I	0.851	0.54
272_V	313_A	0.847	0.54
75_M	163_S	0.843	0.53
85_S	266_F	0.842	0.53
494_V	499_L	0.839	0.53
205_C	403_W	0.836	0.53
478_V	503_L	0.835	0.52
415_P	504_T	0.834	0.52
90_A	265_N	0.834	0.52
499_L	507_A	0.833	0.52
107_I	140_S	0.829	0.52
33_V	356_G	0.829	0.52
421_A	425_V	0.827	0.52
231_R	463_D	0.826	0.52
405_T	449_T	0.822	0.51
505_L	510_V	0.821	0.51
245_P	460_D	0.819	0.51
147_Y	151_S	0.817	0.51
443_S	472_A	0.817	0.51
306_G	310_G	0.816	0.51
96_G	137_D	0.814	0.51
84_R	332_G	0.814	0.51
241_D	245_P	0.813	0.51
495_V	509_V	0.813	0.51
145_H	154_A	0.812	0.50
368_D	372_T	0.812	0.50
136_Q	154_A	0.810	0.50
150_D	449_T	0.807	0.50
509_V	513_K	0.805	0.50
106_Q	216_T	0.805	0.50
142_R	146_A	0.804	0.50
53_M	312_F	0.802	0.50
15_A	465_V	0.797	0.49
120_S	165_W	0.797	0.49
380_P	421_A	0.796	0.49
480_I	503_L	0.796	0.49
370_I	374_L	0.795	0.49
493_P	503_L	0.794	0.49
141_S	223_G	0.788	0.48
113_G	204_Y	0.788	0.48
198_S	427_P	0.786	0.48
208_A	211_M	0.784	0.48
244_T	247_S	0.784	0.48
240_A	243_A	0.784	0.48
20_M	158_T	0.783	0.48
494_V	502_V	0.781	0.48
98_R	316_V	0.781	0.48
10_V	31_A	0.780	0.48
139_D	382_G	0.780	0.48
223_G	471_F	0.779	0.48
291_G	296_T	0.778	0.47
414_I	479_T	0.777	0.47
150_D	465_V	0.777	0.47
133_E	449_T	0.776	0.47
79_A	303_V	0.775	0.47
142_R	154_A	0.775	0.47
67_K	308_L	0.774	0.47
31_A	137_D	0.774	0.47
368_D	394_F	0.772	0.47
143_E	231_R	0.772	0.47
7_L	43_W	0.771	0.47
170_V	191_P	0.771	0.47
170_V	194_L	0.770	0.47
81_F	318_G	0.770	0.47
293_D	364_V	0.769	0.47
12_P	451_V	0.764	0.46
75_M	307_L	0.762	0.46
36_G	298_L	0.762	0.46
122_T	455_I	0.760	0.46
242_G	245_P	0.760	0.46
124_T	456_F	0.759	0.46
499_L	506_G	0.758	0.46
162_V	298_L	0.758	0.46
401_T	405_T	0.755	0.45
113_G	442_H	0.753	0.45
15_A	398_T	0.753	0.45
111_L	217_I	0.751	0.45
240_A	244_T	0.746	0.45
436_G	441_D	0.745	0.45
296_T	299_Q	0.744	0.44
158_T	438_I	0.744	0.44
279_G	283_Y	0.739	0.44
464_H	471_F	0.739	0.44
372_T	504_T	0.739	0.44
91_L	266_F	0.736	0.44
118_F	126_V	0.736	0.44
441_D	444_S	0.734	0.44
12_P	15_A	0.732	0.43
384_L	398_T	0.732	0.43
489_G	492_S	0.731	0.43
172_M	176_G	0.726	0.43
117_F	165_W	0.725	0.43
119_D	122_T	0.724	0.43
51_L	360_A	0.723	0.43
157_T	406_M	0.721	0.43
13_L	93_R	0.721	0.43
112_I	119_D	0.720	0.42
390_L	479_T	0.720	0.42
383_F	484_V	0.719	0.42
158_T	202_N	0.718	0.42
231_R	458_G	0.717	0.42
28_S	457_A	0.716	0.42
120_S	307_L	0.713	0.42
113_G	150_D	0.712	0.42
214_F	505_L	0.711	0.42
203_I	484_V	0.711	0.42
404_G	450_T	0.705	0.41
208_A	479_T	0.705	0.41
360_A	363_K	0.702	0.41
481_V	505_L	0.702	0.41
97_S	100_S	0.699	0.41
436_G	468_Q	0.698	0.41
206_F	364_V	0.698	0.41
7_L	13_L	0.697	0.40
14_L	473_A	0.697	0.40
322_A	438_I	0.697	0.40
357_I	412_V	0.697	0.40
296_T	513_K	0.696	0.40
244_T	460_D	0.695	0.40
91_L	166_I	0.695	0.40
68_F	153_T	0.694	0.40
35_A	70_V	0.692	0.40
158_T	406_M	0.690	0.40
130_A	298_L	0.689	0.40
68_F	409_L	0.688	0.40
143_E	232_A	0.687	0.40
241_D	246_L	0.686	0.40
142_R	145_H	0.685	0.39
210_F	218_T	0.685	0.39
296_T	300_E	0.684	0.39
5_G	8_A	0.684	0.39
85_S	394_F	0.683	0.39
239_I	245_P	0.683	0.39
16_I	82_I	0.681	0.39
98_R	320_V	0.681	0.39
405_T	445_P	0.679	0.39
53_M	57_V	0.677	0.39
31_A	254_G	0.677	0.39
92_E	103_R	0.676	0.39
168_Y	192_F	0.673	0.38
149_L	451_V	0.673	0.38
150_D	441_D	0.673	0.38
358_G	446_I	0.672	0.38
313_A	390_L	0.671	0.38
56_L	393_M	0.671	0.38
268_G	323_L	0.670	0.38
119_D	123_S	0.669	0.38
126_V	395_V	0.669	0.38
231_R	240_A	0.669	0.38
289_K	306_G	0.668	0.38
27_V	367_A	0.668	0.38
142_R	232_A	0.668	0.38
38_L	45_P	0.668	0.38
268_G	511_L	0.665	0.38
13_L	17_V	0.665	0.38
122_T	456_F	0.664	0.38
74_F	315_M	0.663	0.38
452_M	456_F	0.663	0.38
385_P	487_A	0.661	0.37
150_D	457_A	0.661	0.37
131_T	164_N	0.661	0.37
221_F	229_E	0.658	0.37
149_L	438_I	0.658	0.37
146_A	495_V	0.657	0.37
132_R	458_G	0.657	0.37
172_M	210_F	0.654	0.37
494_V	506_G	0.652	0.37
104_E	370_I	0.652	0.37
492_S	498_P	0.651	0.37
107_I	242_G	0.650	0.37
39_V	140_S	0.649	0.36
116_I	450_T	0.648	0.36
123_S	165_W	0.647	0.36
122_T	169_Q	0.647	0.36
170_V	174_I	0.646	0.36
272_V	396_A	0.646	0.36
87_G	419_N	0.646	0.36
90_A	263_L	0.645	0.36
223_G	229_E	0.645	0.36
261_P	346_I	0.645	0.36
338_V	476_A	0.644	0.36
276_V	317_S	0.644	0.36
234_T	237_D	0.643	0.36
405_T	444_S	0.643	0.36
149_L	357_I	0.642	0.36
30_F	370_I	0.640	0.36
388_V	410_T	0.640	0.36
33_V	380_P	0.640	0.36
121_Y	344_M	0.639	0.36
238_T	241_D	0.638	0.36
323_L	498_P	0.638	0.36
152_T	442_H	0.638	0.36
239_I	244_T	0.638	0.36
196_L	275_A	0.637	0.35
224_P	232_A	0.637	0.35
307_L	434_F	0.635	0.35
133_E	451_V	0.635	0.35
106_Q	148_V	0.634	0.35
500_A	506_G	0.634	0.35
192_F	355_W	0.634	0.35
120_S	452_M	0.634	0.35
303_V	306_G	0.634	0.35
130_A	266_F	0.633	0.35
202_N	483_L	0.633	0.35
405_T	409_L	0.631	0.35
223_G	232_A	0.629	0.35
256_P	332_G	0.628	0.35
75_M	437_A	0.628	0.35
39_V	156_V	0.627	0.35
136_Q	453_S	0.627	0.35
59_V	356_G	0.627	0.35
68_F	74_F	0.627	0.35
259_A	268_G	0.626	0.35
15_A	68_F	0.625	0.35
392_A	407_A	0.624	0.34
159_F	205_C	0.624	0.34
239_I	243_A	0.624	0.34
122_T	126_V	0.623	0.34
322_A	333_A	0.623	0.34
431_G	434_F	0.622	0.34
120_S	127_T	0.622	0.34
110_W	212_V	0.621	0.34
132_R	135_A	0.621	0.34
54_D	505_L	0.619	0.34
71_L	266_F	0.619	0.34
6_V	9_L	0.618	0.34
211_M	308_L	0.618	0.34
119_D	347_A	0.616	0.34
232_A	467_T	0.616	0.34
274_L	451_V	0.615	0.34
481_V	488_V	0.614	0.34
113_G	152_T	0.614	0.34
372_T	376_G	0.613	0.34
70_V	308_L	0.612	0.33
410_T	430_V	0.611	0.33
35_A	203_I	0.611	0.33
37_A	426_L	0.610	0.33
97_S	320_V	0.610	0.33
482_M	486_Y	0.609	0.33
489_G	499_L	0.608	0.33
151_S	472_A	0.608	0.33
164_N	446_I	0.607	0.33
14_L	21_T	0.606	0.33
164_N	202_N	0.606	0.33
209_F	313_A	0.605	0.33
445_P	465_V	0.605	0.33
171_S	188_G	0.604	0.33
150_D	402_S	0.603	0.33
134_L	326_G	0.603	0.33
501_T	511_L	0.602	0.33
225_M	467_T	0.601	0.33
275_A	279_G	0.600	0.33
311_A	326_G	0.600	0.33
273_L	314_F	0.600	0.33
496_A	500_A	0.599	0.32
275_A	337_I	0.597	0.32
121_Y	347_A	0.597	0.32
159_F	199_I	0.596	0.32
75_M	455_I	0.595	0.32
261_P	265_N	0.595	0.32
123_S	149_L	0.595	0.32
122_T	163_S	0.595	0.32
236_G	243_A	0.594	0.32
149_L	274_L	0.594	0.32
136_Q	145_H	0.592	0.32
156_V	393_M	0.591	0.32
62_T	82_I	0.591	0.32
113_G	468_Q	0.589	0.32
123_S	154_A	0.587	0.32
172_M	374_L	0.585	0.31
298_L	407_A	0.585	0.31
361_A	370_I	0.582	0.31
60_V	66_T	0.582	0.31
351_I	355_W	0.581	0.31
252_D	278_L	0.581	0.31
345_N	429_L	0.579	0.31
317_S	321_G	0.578	0.31
142_R	453_S	0.577	0.31
396_A	437_A	0.576	0.31
292_V	296_T	0.576	0.31
114_V	140_S	0.573	0.31
240_A	246_L	0.572	0.30
428_V	486_Y	0.572	0.30
501_T	509_V	0.572	0.30
143_E	240_A	0.571	0.30
298_L	396_A	0.570	0.30
49_T	372_T	0.570	0.30
441_D	447_S	0.569	0.30
32_G	360_A	0.569	0.30
236_G	463_D	0.568	0.30
69_I	73_L	0.567	0.30
452_M	459_S	0.567	0.30
19_A	36_G	0.567	0.30
203_I	499_L	0.565	0.30
225_M	229_E	0.565	0.30
85_S	281_M	0.564	0.30
441_D	446_I	0.563	0.30
228_A	232_A	0.563	0.30
101_T	279_G	0.563	0.30
224_P	227_D	0.563	0.30
190_T	193_G	0.563	0.30
248_D	258_T	0.563	0.30
289_K	296_T	0.562	0.30
298_L	344_M	0.561	0.30
35_A	38_L	0.561	0.30
120_S	125_V	0.561	0.30
98_R	108_L	0.561	0.30
13_L	382_G	0.560	0.30
439_W	443_S	0.560	0.30
294_I	298_L	0.559	0.29
402_S	444_S	0.558	0.29
57_V	69_I	0.558	0.29
68_F	143_E	0.558	0.29
370_I	395_V	0.557	0.29
386_L	419_N	0.557	0.29
497_L	503_L	0.556	0.29
224_P	467_T	0.555	0.29
326_G	502_V	0.555	0.29
140_S	219_Q	0.555	0.29
210_F	214_F	0.553	0.29
439_W	452_M	0.553	0.29
175_A	270_I	0.552	0.29
441_D	464_H	0.552	0.29
159_F	383_F	0.552	0.29
228_A	240_A	0.551	0.29
69_I	460_D	0.549	0.29
9_L	13_L	0.546	0.29
481_V	484_V	0.545	0.28
72_I	344_M	0.545	0.28
210_F	473_A	0.543	0.28
114_V	373_T	0.542	0.28
151_S	453_S	0.542	0.28
91_L	324_A	0.541	0.28
204_Y	449_T	0.541	0.28
86_G	445_P	0.540	0.28
212_V	468_Q	0.540	0.28
60_V	82_I	0.539	0.28
319_F	323_L	0.538	0.28
19_A	297_A	0.538	0.28
395_V	409_L	0.538	0.28
318_G	430_V	0.538	0.28
359_M	362_E	0.537	0.28
485_L	495_V	0.537	0.28
39_V	73_L	0.537	0.28
113_G	156_V	0.536	0.28
134_L	260_N	0.535	0.28
364_V	409_L	0.534	0.28
212_V	442_H	0.534	0.28
357_I	364_V	0.534	0.28
148_V	156_V	0.533	0.28
76_G	121_Y	0.533	0.28
148_V	274_L	0.533	0.28
260_N	320_V	0.533	0.28
170_V	192_F	0.533	0.28
441_D	445_P	0.532	0.28
150_D	404_G	0.532	0.28
116_I	149_L	0.532	0.28
71_L	119_D	0.532	0.28
492_S	499_L	0.532	0.28
256_P	327_T	0.532	0.28
246_L	458_G	0.532	0.28
132_R	280_S	0.531	0.27
145_H	453_S	0.530	0.27
90_A	350_I	0.530	0.27
14_L	37_A	0.529	0.27
49_T	312_F	0.529	0.27
84_R	416_L	0.528	0.27
383_F	416_L	0.528	0.27
503_L	510_V	0.528	0.27
148_V	216_T	0.527	0.27
380_P	513_K	0.527	0.27
498_P	513_K	0.527	0.27
53_M	308_L	0.526	0.27
236_G	239_I	0.525	0.27
131_T	454_S	0.525	0.27
483_L	486_Y	0.525	0.27
106_Q	140_S	0.525	0.27
10_V	313_A	0.523	0.27
232_A	238_T	0.523	0.27
49_T	494_V	0.523	0.27
127_T	456_F	0.523	0.27
227_D	326_G	0.523	0.27
266_F	483_L	0.522	0.27
72_I	456_F	0.520	0.27
326_G	329_D	0.520	0.27
270_I	313_A	0.519	0.27
196_L	267_F	0.519	0.27
477_G	507_A	0.517	0.26
111_L	268_G	0.517	0.26
224_P	229_E	0.516	0.26
78_G	318_G	0.516	0.26
147_Y	403_W	0.516	0.26
494_V	505_L	0.515	0.26
399_T	408_I	0.515	0.26
402_S	445_P	0.515	0.26
481_V	510_V	0.515	0.26
74_F	271_A	0.514	0.26
151_S	204_Y	0.514	0.26
234_T	495_V	0.513	0.26
345_N	458_G	0.513	0.26
224_P	511_L	0.511	0.26
387_L	424_A	0.510	0.26
15_A	441_D	0.508	0.26
501_T	506_G	0.507	0.26
70_V	99_I	0.507	0.26
154_A	453_S	0.506	0.26
453_S	468_Q	0.506	0.26
120_S	456_F	0.506	0.26
70_V	341_F	0.505	0.26
66_T	311_A	0.504	0.26
161_P	202_N	0.504	0.26
307_L	311_A	0.504	0.26
330_L	334_T	0.504	0.26
15_A	397_F	0.504	0.26
302_D	356_G	0.503	0.26
209_F	276_V	0.503	0.26
8_A	264_L	0.502	0.25
105_S	483_L	0.502	0.25
31_A	146_A	0.502	0.25
293_D	312_F	0.502	0.25
434_F	482_M	0.501	0.25
299_Q	453_S	0.501	0.25
119_D	311_A	0.500	0.25
492_S	497_L	0.500	0.25
210_F	504_T	0.500	0.25

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4r1iA	2	0.799	99.9	0.872	Contact Map
4r0cA	3	0.7698	99.9	0.885	Contact Map
4f35D	2	0.6873	99.8	0.899	Contact Map
4pypA	1	0.6134	89.5	0.973	Contact Map
3wdoA	1	0.7027	58.8	0.98	Contact Map
2nwlA	3	0.6306	54.1	0.98	Contact Map
4m64A	1	0.6684	39	0.982	Contact Map
4tphA	2	0.6409	38.8	0.982	Contact Map
4j05A	3	0.622	25.5	0.984	Contact Map
3qe7A	2	0.378	23.5	0.984	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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