VATB - HALSA - GREMLIN Contacts

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VATB - V-type ATP synthase beta chain

UniProt:	Q9HNE4	Sequences: MKEYQTITEVSGPLVYVETDEPIGYDEIVEIETPNGDVKRGQVLESSDGFVAIQVFEGTEGVGKDASVRFLGETLKMPVTEDLLGRVLDGSGNPIDGGPDIVPDDRVDIVGEAINPHAREYPEEFIQTGVSGIDGMNTLVRGQKLPIFSGSGLPHSDLALQIARQASVPEEEAETDDDEGSEFAVVFGAMGITAEEANEFMDDFERTGALERSVVFMNLADDPAVERTVTPRMALTTAEYLAFEKDYHVLVILTDMTNYCEALRQIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIEGKEGSVTQIPILTMPGDDDTHPIPDLTGYITEGQIMMNRDLNSQGVTPPVNVLPSLSRLMDDGIGEGLTRADHGDVSDQLYAAYAEGEELRDLVNIVGREALSERDNRYLDFADRFEAEFIDQGFKTNRDIEETLDLGWELLSMFPKTELNRVDEDLIEDHYVEDVADEATAD	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	471 (416)
Sequences:	7175 (2471)
Seq/√Len:	121.2

ECOLI - ATPB ATPA FLII RHO
BACSU - ATPA FLII ATPB RHO
HALSA - VATB VATA
SULSO - VATB VATA

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
89_D	93_N	7.866	1.00
141_R	248_H	4.688	1.00
188_G	234_A	4.470	1.00
336_N	349_N	4.150	1.00
17_V	53_I	3.873	1.00
132_G	348_V	3.377	1.00
378_L	414_F	3.195	1.00
27_E	70_F	3.178	1.00
86_R	96_D	3.026	1.00
29_V	53_I	2.946	1.00
81_E	245_K	2.874	1.00
73_E	76_K	2.729	1.00
428_D	431_E	2.691	1.00
41_G	53_I	2.648	1.00
81_E	247_Y	2.589	1.00
23_I	43_V	2.579	1.00
124_E	141_R	2.575	1.00
186_V	238_A	2.555	1.00
30_E	69_R	2.518	1.00
235_L	308_P	2.493	1.00
29_V	68_V	2.461	1.00
139_L	307_I	2.345	1.00
362_I	372_G	2.337	1.00
82_D	104_D	2.283	1.00
157_D	423_F	2.276	1.00
76_K	106_R	2.274	1.00
238_A	304_V	2.257	1.00
377_Q	380_A	2.246	1.00
17_V	68_V	2.227	1.00
88_L	237_T	2.218	1.00
207_T	211_E	2.206	1.00
131_S	427_R	2.189	1.00
216_F	237_T	2.153	1.00
16_Y	50_F	2.099	1.00
339_L	344_V	2.069	1.00
386_E	389_R	2.069	1.00
184_A	247_Y	2.050	1.00
317_D	334_M	2.048	1.00
198_N	202_D	2.044	1.00
7_I	62_V	1.989	1.00
107_V	111_G	1.953	1.00
136_M	378_L	1.951	1.00
202_D	205_E	1.934	1.00
411_A	415_E	1.933	1.00
377_Q	406_R	1.932	1.00
369_A	373_D	1.889	1.00
208_G	211_E	1.879	1.00
24_G	27_E	1.869	1.00
107_V	240_Y	1.866	1.00
9_E	16_Y	1.859	1.00
139_L	333_I	1.857	1.00
240_Y	245_K	1.830	1.00
184_A	214_V	1.818	1.00
201_M	215_V	1.811	1.00
239_E	293_R	1.803	1.00
30_E	38_V	1.793	1.00
135_G	432_T	1.788	1.00
107_V	236_T	1.787	1.00
184_A	241_L	1.772	1.00
214_V	237_T	1.771	1.00
438_E	441_S	1.769	1.00
127_Q	134_D	1.765	1.00
4_Y	67_S	1.757	1.00
126_I	183_F	1.745	1.00
392_V	408_L	1.739	1.00
344_V	420_D	1.737	1.00
27_E	72_G	1.735	1.00
135_G	418_F	1.729	1.00
107_V	244_E	1.721	1.00
8_T	18_E	1.718	1.00
32_E	67_S	1.708	1.00
98_G	205_E	1.701	1.00
389_R	393_N	1.692	1.00
31_I	41_G	1.679	1.00
202_D	206_R	1.662	1.00
124_E	296_R	1.660	1.00
342_Q	415_E	1.655	1.00
374_V	437_W	1.653	1.00
344_V	415_E	1.653	1.00
343_G	376_D	1.614	1.00
310_L	325_T	1.613	1.00
86_R	98_G	1.601	1.00
186_V	237_T	1.585	1.00
88_L	216_F	1.567	1.00
78_P	106_R	1.566	1.00
32_E	69_R	1.535	1.00
150_G	153_L	1.525	1.00
86_R	99_P	1.504	1.00
94_P	99_P	1.497	1.00
81_E	240_Y	1.480	1.00
138_T	358_M	1.477	1.00
77_M	237_T	1.476	1.00
146_P	329_T	1.473	1.00
83_L	237_T	1.465	1.00
32_E	38_V	1.421	1.00
6_T	67_S	1.420	1.00
82_D	102_V	1.412	1.00
8_T	50_F	1.410	1.00
190_M	230_T	1.408	1.00
248_H	303_S	1.406	1.00
358_M	375_S	1.406	1.00
17_V	20_D	1.405	1.00
128_T	139_L	1.402	1.00
409_D	412_D	1.395	1.00
7_I	66_A	1.392	1.00
89_D	222_D	1.392	1.00
203_D	360_D	1.385	1.00
188_G	253_L	1.376	1.00
105_D	244_E	1.370	1.00
231_P	290_L	1.367	1.00
30_E	71_L	1.366	1.00
86_R	94_P	1.363	1.00
82_D	103_P	1.350	1.00
384_E	387_E	1.326	1.00
10_V	62_V	1.323	1.00
75_L	109_I	1.323	1.00
59_T	62_V	1.315	1.00
376_D	379_Y	1.308	1.00
23_I	51_V	1.307	1.00
87_V	201_M	1.306	1.00
422_G	425_T	1.304	1.00
235_L	294_A	1.303	1.00
249_V	304_V	1.299	1.00
133_I	162_I	1.298	1.00
319_H	322_P	1.297	1.00
342_Q	389_R	1.294	1.00
120_E	299_G	1.289	1.00
206_R	209_A	1.286	1.00
77_M	233_M	1.282	1.00
417_E	420_D	1.269	1.00
406_R	410_F	1.269	1.00
73_E	106_R	1.263	1.00
122_P	140_V	1.253	0.99
29_V	41_G	1.250	0.99
291_Y	328_I	1.243	0.99
352_P	386_E	1.241	0.99
157_D	424_K	1.241	0.99
257_T	261_E	1.239	0.99
263_L	286_D	1.238	0.99
23_I	29_V	1.238	0.99
18_E	49_G	1.237	0.99
33_T	37_D	1.233	0.99
205_E	210_L	1.226	0.99
380_A	404_D	1.221	0.99
189_A	197_A	1.212	0.99
359_D	372_G	1.205	0.99
111_G	244_E	1.204	0.99
103_P	106_R	1.202	0.99
137_N	333_I	1.193	0.99
287_L	325_T	1.179	0.99
84_L	184_A	1.178	0.99
267_G	275_G	1.178	0.99
163_A	213_S	1.176	0.99
357_L	361_G	1.175	0.99
40_R	93_N	1.171	0.99
6_T	18_E	1.167	0.99
431_E	435_L	1.161	0.99
78_P	103_P	1.160	0.99
84_L	214_V	1.155	0.99
246_D	301_E	1.153	0.99
377_Q	381_A	1.149	0.99
312_M	319_H	1.146	0.99
368_R	429_I	1.144	0.99
128_T	307_I	1.141	0.99
235_L	304_V	1.137	0.99
30_E	40_R	1.130	0.99
126_I	166_A	1.127	0.99
90_G	233_M	1.123	0.99
32_E	66_A	1.118	0.99
344_V	419_I	1.116	0.99
245_K	249_V	1.116	0.99
133_I	333_I	1.115	0.99
413_R	417_E	1.114	0.99
402_E	405_N	1.109	0.99
358_M	362_I	1.108	0.99
256_M	325_T	1.107	0.99
18_E	50_F	1.106	0.99
120_E	123_E	1.105	0.99
55_V	59_T	1.096	0.99
291_Y	325_T	1.090	0.99
338_D	341_S	1.087	0.99
16_Y	47_S	1.086	0.99
188_G	251_V	1.075	0.98
388_L	392_V	1.070	0.98
118_A	300_K	1.060	0.98
130_V	158_L	1.058	0.98
86_R	95_I	1.048	0.98
150_G	337_R	1.046	0.98
399_A	409_D	1.041	0.98
57_E	226_E	1.034	0.98
125_F	361_G	1.029	0.98
127_Q	429_I	1.028	0.98
17_V	29_V	1.027	0.98
194_A	219_L	1.024	0.98
371_H	433_L	1.024	0.98
222_D	226_E	1.020	0.98
338_D	386_E	1.018	0.98
93_N	100_D	1.018	0.98
139_L	305_T	1.014	0.98
312_M	322_P	1.011	0.98
339_L	420_D	1.010	0.98
232_R	286_D	0.999	0.97
145_L	307_I	0.997	0.97
63_G	66_A	0.994	0.97
256_M	291_Y	0.991	0.97
315_D	318_T	0.990	0.97
38_V	42_Q	0.987	0.97
315_D	337_R	0.986	0.97
349_N	352_P	0.981	0.97
130_V	133_I	0.977	0.97
163_A	185_V	0.960	0.97
83_L	214_V	0.952	0.97
190_M	253_L	0.952	0.97
372_G	376_D	0.950	0.97
371_H	429_I	0.948	0.96
90_G	226_E	0.945	0.96
105_D	240_Y	0.937	0.96
287_L	328_I	0.937	0.96
147_I	159_A	0.937	0.96
227_R	265_Q	0.936	0.96
86_R	101_I	0.934	0.96
98_G	101_I	0.931	0.96
80_T	83_L	0.930	0.96
128_T	134_D	0.930	0.96
406_R	409_D	0.929	0.96
83_L	88_L	0.927	0.96
186_V	214_V	0.926	0.96
214_V	241_L	0.924	0.96
242_A	249_V	0.923	0.96
96_D	99_P	0.921	0.96
132_G	419_I	0.921	0.96
28_I	71_L	0.921	0.96
33_T	39_K	0.921	0.96
235_L	251_V	0.918	0.96
163_A	252_I	0.917	0.96
384_E	404_D	0.917	0.96
90_G	95_I	0.915	0.96
190_M	231_P	0.914	0.96
409_D	413_R	0.914	0.96
31_I	66_A	0.913	0.96
150_G	315_D	0.913	0.96
322_P	334_M	0.910	0.96
250_L	307_I	0.908	0.95
183_F	248_H	0.908	0.95
81_E	241_L	0.907	0.95
90_G	222_D	0.907	0.95
4_Y	69_R	0.906	0.95
209_A	213_S	0.900	0.95
285_T	288_A	0.900	0.95
380_A	384_E	0.896	0.95
331_G	356_R	0.896	0.95
184_A	249_V	0.894	0.95
261_E	279_Y	0.892	0.95
139_L	145_L	0.891	0.95
185_V	188_G	0.888	0.95
38_V	43_V	0.885	0.95
38_V	41_G	0.882	0.95
287_L	324_L	0.879	0.95
115_N	118_A	0.878	0.95
163_A	187_F	0.878	0.95
410_F	441_S	0.876	0.95
150_G	323_D	0.874	0.94
75_L	229_V	0.874	0.94
261_E	313_P	0.872	0.94
138_T	429_I	0.870	0.94
359_D	379_Y	0.867	0.94
334_M	337_R	0.867	0.94
167_S	248_H	0.866	0.94
164_R	168_V	0.863	0.94
399_A	408_L	0.862	0.94
39_K	57_E	0.860	0.94
317_D	322_P	0.857	0.94
193_T	196_E	0.856	0.94
133_I	137_N	0.854	0.94
341_S	352_P	0.853	0.94
395_V	405_N	0.851	0.94
427_R	435_L	0.849	0.94
14_L	270_R	0.845	0.93
199_E	360_D	0.841	0.93
124_E	248_H	0.841	0.93
120_E	296_R	0.840	0.93
296_R	303_S	0.840	0.93
374_V	433_L	0.839	0.93
10_V	109_I	0.833	0.93
125_F	138_T	0.833	0.93
384_E	388_L	0.830	0.93
294_A	306_Q	0.829	0.93
192_I	196_E	0.829	0.93
40_R	43_V	0.827	0.93
27_E	74_T	0.826	0.93
162_I	250_L	0.826	0.93
234_A	251_V	0.824	0.93
136_M	375_S	0.823	0.92
385_G	411_A	0.823	0.92
248_H	296_R	0.823	0.92
358_M	371_H	0.819	0.92
88_L	101_I	0.819	0.92
357_L	362_I	0.817	0.92
255_D	309_I	0.817	0.92
135_G	436_G	0.815	0.92
260_C	287_L	0.815	0.92
134_D	432_T	0.814	0.92
140_V	357_L	0.813	0.92
317_D	352_P	0.812	0.92
14_L	52_A	0.812	0.92
15_V	31_I	0.812	0.92
127_Q	436_G	0.811	0.92
259_Y	290_L	0.809	0.92
370_D	437_W	0.808	0.92
378_L	440_L	0.808	0.92
159_A	252_I	0.800	0.91
57_E	93_N	0.795	0.91
27_E	134_D	0.793	0.91
150_G	316_D	0.792	0.91
27_E	71_L	0.791	0.91
393_N	402_E	0.791	0.91
201_M	205_E	0.788	0.91
390_D	396_G	0.788	0.91
79_V	236_T	0.787	0.91
148_F	322_P	0.782	0.90
138_T	362_I	0.782	0.90
11_S	394_I	0.779	0.90
76_K	108_D	0.773	0.90
95_I	217_M	0.772	0.90
380_A	420_D	0.771	0.90
164_R	212_R	0.771	0.90
400_L	405_N	0.768	0.90
42_Q	45_E	0.761	0.89
429_I	433_L	0.761	0.89
82_D	105_D	0.760	0.89
78_P	104_D	0.756	0.89
314_G	319_H	0.752	0.89
283_M	286_D	0.751	0.89
120_E	301_E	0.750	0.89
87_V	95_I	0.750	0.89
373_D	376_D	0.750	0.89
249_V	265_Q	0.749	0.88
442_M	445_K	0.749	0.88
209_A	212_R	0.744	0.88
233_M	236_T	0.743	0.88
150_G	278_G	0.743	0.88
39_K	42_Q	0.742	0.88
74_T	108_D	0.741	0.88
381_A	414_F	0.738	0.88
390_D	393_N	0.737	0.88
75_L	134_D	0.735	0.88
382_Y	414_F	0.733	0.87
279_Y	316_D	0.732	0.87
7_I	15_V	0.731	0.87
218_N	222_D	0.730	0.87
128_T	133_I	0.729	0.87
109_I	233_M	0.728	0.87
86_R	100_D	0.728	0.87
42_Q	56_F	0.727	0.87
324_L	396_G	0.724	0.87
232_R	259_Y	0.722	0.87
373_D	377_Q	0.721	0.87
56_F	226_E	0.720	0.86
192_I	258_N	0.720	0.86
374_V	436_G	0.718	0.86
316_D	323_D	0.715	0.86
259_Y	286_D	0.714	0.86
38_V	69_R	0.712	0.86
141_R	303_S	0.712	0.86
91_S	94_P	0.707	0.85
370_D	444_P	0.705	0.85
33_T	66_A	0.704	0.85
57_E	223_P	0.704	0.85
47_S	52_A	0.703	0.85
75_L	233_M	0.703	0.85
184_A	212_R	0.702	0.85
197_A	217_M	0.702	0.85
54_Q	266_I	0.699	0.85
427_R	432_T	0.697	0.85
26_D	43_V	0.696	0.85
16_Y	52_A	0.696	0.85
138_T	371_H	0.695	0.84
121_Y	360_D	0.695	0.84
239_E	242_A	0.693	0.84
427_R	433_L	0.693	0.84
46_S	52_A	0.693	0.84
382_Y	386_E	0.692	0.84
89_D	95_I	0.687	0.84
430_E	434_D	0.686	0.84
84_L	210_L	0.685	0.84
101_I	104_D	0.684	0.84
95_I	100_D	0.683	0.83
153_L	337_R	0.682	0.83
28_I	40_R	0.681	0.83
371_H	375_S	0.681	0.83
230_T	234_A	0.680	0.83
368_R	371_H	0.678	0.83
211_E	214_V	0.677	0.83
389_R	415_E	0.676	0.83
381_A	406_R	0.675	0.83
17_V	51_V	0.674	0.83
23_I	70_F	0.672	0.82
105_D	245_K	0.672	0.82
33_T	38_V	0.672	0.82
126_I	139_L	0.668	0.82
125_F	357_L	0.668	0.82
228_T	263_L	0.668	0.82
45_E	52_A	0.668	0.82
137_N	354_L	0.668	0.82
193_T	258_N	0.667	0.82
159_A	309_I	0.667	0.82
402_E	406_R	0.667	0.82
223_P	226_E	0.666	0.82
128_T	294_A	0.666	0.82
378_L	436_G	0.665	0.82
185_V	252_I	0.664	0.82
253_L	290_L	0.664	0.82
237_T	241_L	0.663	0.82
83_L	103_P	0.662	0.82
72_G	75_L	0.661	0.81
240_Y	244_E	0.658	0.81
164_R	424_K	0.657	0.81
385_G	415_E	0.656	0.81
252_I	309_I	0.653	0.81
397_R	405_N	0.652	0.81
404_D	412_D	0.651	0.80
227_R	239_E	0.649	0.80
29_V	51_V	0.649	0.80
185_V	213_S	0.648	0.80
28_I	75_L	0.648	0.80
11_S	14_L	0.647	0.80
276_R	324_L	0.646	0.80
323_D	326_G	0.646	0.80
374_V	440_L	0.646	0.80
439_L	443_F	0.646	0.80
385_G	389_R	0.645	0.80
130_V	423_F	0.643	0.80
102_V	105_D	0.643	0.80
369_A	422_G	0.642	0.80
19_T	23_I	0.641	0.79
381_A	407_Y	0.640	0.79
84_L	247_Y	0.640	0.79
251_V	294_A	0.639	0.79
127_Q	432_T	0.637	0.79
15_V	59_T	0.637	0.79
244_E	304_V	0.637	0.79
260_C	321_I	0.636	0.79
86_R	97_G	0.635	0.79
151_S	328_I	0.633	0.79
125_F	429_I	0.632	0.78
122_P	357_L	0.632	0.78
137_N	348_V	0.632	0.78
261_E	396_G	0.631	0.78
235_L	253_L	0.631	0.78
435_L	438_E	0.630	0.78
52_A	270_R	0.630	0.78
165_Q	426_N	0.627	0.78
388_L	393_N	0.627	0.78
151_S	396_G	0.626	0.78
112_E	289_Q	0.626	0.78
160_L	217_M	0.626	0.78
334_M	352_P	0.625	0.78
140_V	356_R	0.623	0.77
29_V	43_V	0.623	0.77
368_R	433_L	0.622	0.77
370_D	374_V	0.622	0.77
336_N	352_P	0.621	0.77
261_E	324_L	0.619	0.77
93_N	106_R	0.616	0.77
368_R	437_W	0.615	0.77
24_G	63_G	0.614	0.76
418_F	435_L	0.613	0.76
272_E	295_G	0.613	0.76
398_E	401_S	0.612	0.76
147_I	333_I	0.611	0.76
98_G	210_L	0.609	0.76
149_S	161_Q	0.607	0.76
46_S	64_K	0.606	0.76
228_T	266_I	0.606	0.76
203_D	236_T	0.605	0.75
154_P	254_T	0.605	0.75
77_M	80_T	0.604	0.75
231_P	253_L	0.603	0.75
54_Q	270_R	0.602	0.75
31_I	68_V	0.601	0.75
206_R	210_L	0.601	0.75
135_G	138_T	0.601	0.75
382_Y	411_A	0.600	0.75
33_T	62_V	0.598	0.75
108_D	236_T	0.595	0.74
95_I	222_D	0.594	0.74
235_L	239_E	0.593	0.74
151_S	261_E	0.591	0.74
389_R	408_L	0.590	0.74
111_G	236_T	0.590	0.74
327_Y	354_L	0.590	0.74
105_D	108_D	0.590	0.74
187_F	197_A	0.588	0.73
381_A	384_E	0.588	0.73
94_P	98_G	0.588	0.73
155_H	254_T	0.588	0.73
145_L	331_G	0.587	0.73
132_G	350_V	0.586	0.73
81_E	214_V	0.585	0.73
56_F	232_R	0.585	0.73
350_V	382_Y	0.585	0.73
184_A	245_K	0.585	0.73
242_A	304_V	0.583	0.73
351_L	382_Y	0.583	0.73
88_L	91_S	0.582	0.73
410_F	413_R	0.581	0.72
39_K	58_G	0.581	0.72
441_S	444_P	0.580	0.72
33_T	61_G	0.580	0.72
128_T	166_A	0.580	0.72
90_G	94_P	0.579	0.72
106_R	406_R	0.577	0.72
160_L	200_F	0.577	0.72
54_Q	396_G	0.575	0.72
7_I	10_V	0.573	0.71
94_P	100_D	0.572	0.71
30_E	37_D	0.571	0.71
183_F	247_Y	0.569	0.71
264_R	321_I	0.569	0.71
11_S	270_R	0.568	0.71
128_T	148_F	0.568	0.71
408_L	412_D	0.568	0.71
427_R	431_E	0.568	0.71
117_H	349_N	0.568	0.71
151_S	327_Y	0.567	0.71
7_I	68_V	0.567	0.71
140_V	361_G	0.566	0.70
108_D	111_G	0.562	0.70
82_D	99_P	0.562	0.70
401_S	408_L	0.562	0.70
437_W	440_L	0.562	0.70
318_T	325_T	0.561	0.70
362_I	375_S	0.561	0.70
82_D	101_I	0.561	0.70
236_T	240_Y	0.560	0.70
147_I	387_E	0.559	0.70
39_K	62_V	0.558	0.69
131_S	435_L	0.557	0.69
434_D	438_E	0.557	0.69
148_F	329_T	0.556	0.69
94_P	101_I	0.554	0.69
15_V	41_G	0.554	0.69
58_G	61_G	0.553	0.69
118_A	299_G	0.553	0.69
123_E	301_E	0.553	0.69
204_F	209_A	0.552	0.69
119_R	295_G	0.551	0.68
441_S	445_K	0.551	0.68
431_E	434_D	0.551	0.68
151_S	326_G	0.547	0.68
259_Y	263_L	0.547	0.68
56_F	91_S	0.546	0.68
164_R	201_M	0.546	0.68
54_Q	390_D	0.546	0.68
362_I	433_L	0.546	0.68
44_L	270_R	0.544	0.67
381_A	410_F	0.544	0.67
124_E	301_E	0.543	0.67
424_K	435_L	0.542	0.67
413_R	445_K	0.541	0.67
16_Y	45_E	0.541	0.67
256_M	290_L	0.541	0.67
166_A	248_H	0.541	0.67
232_R	270_R	0.539	0.67
164_R	207_T	0.537	0.67
39_K	61_G	0.536	0.66
130_V	161_Q	0.535	0.66
216_F	233_M	0.535	0.66
401_S	404_D	0.534	0.66
265_Q	279_Y	0.533	0.66
160_L	213_S	0.532	0.66
202_D	207_T	0.530	0.66
145_L	333_I	0.530	0.66
296_R	299_G	0.530	0.66
51_V	68_V	0.530	0.66
156_S	254_T	0.529	0.65
339_L	356_R	0.529	0.65
379_Y	382_Y	0.529	0.65
123_E	296_R	0.527	0.65
85_G	96_D	0.523	0.64
133_I	158_L	0.520	0.64
205_E	211_E	0.520	0.64
422_G	426_N	0.520	0.64
210_L	215_V	0.519	0.64
71_L	74_T	0.519	0.64
42_Q	229_V	0.518	0.64
385_G	392_V	0.518	0.64
100_D	104_D	0.517	0.64
330_E	356_R	0.517	0.64
188_G	306_Q	0.516	0.63
91_S	394_I	0.515	0.63
125_F	362_I	0.514	0.63
307_I	343_G	0.514	0.63
227_R	306_Q	0.513	0.63
205_E	213_S	0.511	0.63
208_G	213_S	0.511	0.63
12_G	278_G	0.511	0.63
222_D	280_P	0.510	0.63
42_Q	196_E	0.510	0.63
189_A	192_I	0.509	0.62
343_G	380_A	0.509	0.62
127_Q	167_S	0.509	0.62
276_R	396_G	0.509	0.62
279_Y	390_D	0.508	0.62
147_I	335_M	0.508	0.62
432_T	435_L	0.508	0.62
110_V	232_R	0.507	0.62
313_P	318_T	0.507	0.62
359_D	423_F	0.507	0.62
412_D	415_E	0.507	0.62
141_R	285_T	0.507	0.62
14_L	163_A	0.506	0.62
316_D	319_H	0.506	0.62
104_D	107_V	0.506	0.62
84_L	87_V	0.505	0.62
143_Q	331_G	0.505	0.62
188_G	231_P	0.504	0.62
227_R	261_E	0.503	0.62
312_M	318_T	0.503	0.62
220_A	291_Y	0.502	0.61
225_V	266_I	0.502	0.61
138_T	354_L	0.501	0.61
374_V	443_F	0.501	0.61
42_Q	75_L	0.500	0.61

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3vr4D	1	0.9575	100	0.114	Contact Map
2c61A	2	0.9257	100	0.117	Contact Map
3gqbB	1	0.9724	100	0.12	Contact Map
3oaaA	2	0.9448	100	0.126	Contact Map
2qe7A	1	0.9406	100	0.131	Contact Map
3j9tB	1	0.9682	100	0.134	Contact Map
2ck3A	1	0.9639	100	0.14	Contact Map
2r9vA	1	0.9469	100	0.144	Contact Map
1fx0A	1	0.9448	100	0.152	Contact Map
3mfyA	1	0.7983	100	0.154	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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