VATA - HALSA - GREMLIN Contacts

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VATA - V-type ATP synthase alpha chain

UniProt:	Q9HNE3	Sequences: MSQAEAITDTGEIESVSGPVVTATGLDAQMNDVVYVGDEGLMGEVIEIEGDVTTIQVYEETSGIGPGQPVDNTGEPLTVDLGPGMLDSIYDGVQRPLDVLEDEMGAFLDRGVDAPGIDLDTDWEFEPTVEAGDEVAAGDVVGTVDETVSIEHKVLVPPRSDGGEVVAVESGTFTVDDTVVELDTGEEIQMHQEWPVRRQRPTVDKQTPTEPLVSGQRILDGLFPIAKGGTAAIPGPFGSGKTVTQQSLAKFADADIVVYIGCGERGNEMTEVIEDFPELPDPQTGNPLMARTTLIANTSNMPVAARESCIYTGITIAEYYRDMGYDVALMADSTSRWAEAMREISSRLEEMPGEEGYPAYLAARLSEFYERAGYFENFNGTEGSISVIGAVSPPGGDFSEPVTQNTLRIVKTFWALDSDLAERRHFPAINWDESYSLYKDQLDPWFTDNVVDDWAEQRQWAVDILDEESELEEIVQLVGKDALPEDQQLTLEVARYIREAWLQQNALHDVDRYCPPEKTYAILSGIKTLHEESFEALDAGVPVEEITSIDAAPRLNRLGTTPDDEHEAEVAEIKQQITEQLRELY	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	585 (569)
Sequences:	990 (512)
Seq/√Len:	21.5

HALSA - VATA
SULSO - VATA

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
124_E	172_T	6.827	1.00
460_W	531_E	5.875	1.00
417_D	430_N	4.946	1.00
129_V	164_E	4.945	1.00
122_D	174_T	4.638	1.00
236_P	239_S	4.496	1.00
165_V	183_D	4.462	1.00
124_E	170_S	4.305	1.00
134_E	163_G	4.265	1.00
461_A	523_L	4.062	1.00
286_N	290_A	4.038	1.00
163_G	183_D	3.876	1.00
80_D	119_L	3.846	1.00
130_E	133_D	3.695	1.00
554_R	576_Q	3.667	1.00
204_D	376_E	3.634	1.00
222_L	461_A	3.608	1.00
181_E	185_G	3.555	1.00
174_T	177_D	3.547	1.00
166_V	181_E	3.535	1.00
225_I	386_S	3.437	1.00
127_P	170_S	3.381	1.00
40_G	71_D	3.318	1.00
148_V	286_N	3.275	1.00
126_E	145_D	3.241	1.00
155_L	192_Q	3.194	1.00
181_E	187_E	3.166	1.00
310_I	341_M	3.001	0.99
451_V	520_Y	2.963	0.99
143_T	151_E	2.856	0.99
149_S	284_T	2.775	0.99
28_A	45_V	2.775	0.99
119_L	176_D	2.754	0.99
20_V	54_T	2.751	0.99
374_Y	382_E	2.740	0.99
377_N	381_T	2.686	0.99
164_E	167_A	2.684	0.99
566_H	569_E	2.664	0.99
178_T	189_Q	2.634	0.99
165_V	185_G	2.584	0.98
126_E	143_T	2.576	0.98
122_D	172_T	2.567	0.98
258_V	316_I	2.528	0.98
141_V	179_V	2.466	0.98
137_A	158_P	2.465	0.98
464_I	490_T	2.464	0.98
86_L	150_I	2.294	0.96
141_V	180_V	2.275	0.96
141_V	156_V	2.273	0.96
90_Y	175_V	2.233	0.96
23_A	70_V	2.232	0.96
293_T	316_I	2.225	0.96
442_L	446_F	2.200	0.95
141_V	188_I	2.142	0.95
176_D	191_H	2.131	0.94
117_I	175_V	2.115	0.94
122_D	177_D	2.108	0.94
155_L	323_M	2.078	0.94
135_V	156_V	2.076	0.94
521_A	571_A	2.062	0.93
457_Q	524_S	2.060	0.93
90_Y	116_G	2.046	0.93
135_V	141_V	2.005	0.92
493_V	530_H	2.002	0.92
295_I	316_I	1.996	0.92
209_T	374_Y	1.973	0.92
139_D	381_T	1.969	0.92
87_D	290_A	1.964	0.92
32_D	72_N	1.960	0.92
567_E	571_A	1.952	0.91
178_T	181_E	1.932	0.91
150_I	256_I	1.909	0.90
99_V	102_D	1.900	0.90
107_F	300_N	1.893	0.90
90_Y	94_Q	1.887	0.90
258_V	317_A	1.887	0.90
467_E	470_E	1.877	0.90
314_I	387_V	1.874	0.90
126_E	170_S	1.870	0.89
156_V	182_L	1.865	0.89
85_M	293_T	1.855	0.89
24_T	52_V	1.835	0.89
398_F	403_T	1.831	0.88
453_D	520_Y	1.827	0.88
16_V	65_G	1.827	0.88
165_V	181_E	1.826	0.88
178_T	187_E	1.806	0.88
23_A	55_I	1.796	0.87
275_D	278_E	1.796	0.87
446_F	516_P	1.785	0.87
39_E	110_R	1.738	0.86
160_S	182_L	1.737	0.86
216_Q	247_S	1.735	0.85
202_T	375_F	1.732	0.85
260_I	313_G	1.730	0.85
13_I	68_Q	1.722	0.85
48_I	53_T	1.709	0.85
135_V	164_E	1.703	0.84
461_A	497_I	1.695	0.84
221_G	519_T	1.688	0.84
15_S	22_T	1.688	0.84
522_I	558_L	1.686	0.84
128_T	153_K	1.680	0.84
140_V	164_E	1.676	0.83
453_D	524_S	1.672	0.83
168_V	173_F	1.665	0.83
164_E	180_V	1.660	0.83
233_I	244_T	1.651	0.82
468_E	498_R	1.626	0.81
317_A	385_I	1.626	0.81
528_T	578_T	1.624	0.81
271_E	275_D	1.622	0.81
176_D	189_Q	1.616	0.81
222_L	462_V	1.610	0.81
525_G	558_L	1.609	0.81
100_L	114_A	1.600	0.80
271_E	388_I	1.564	0.79
48_I	108_L	1.559	0.79
125_F	142_G	1.557	0.79
338_A	402_V	1.550	0.78
178_T	182_L	1.541	0.78
75_E	193_E	1.535	0.77
569_E	572_E	1.533	0.77
447_T	451_V	1.519	0.77
206_Q	376_E	1.515	0.77
169_E	173_F	1.514	0.76
82_G	430_N	1.506	0.76
179_V	190_M	1.504	0.76
532_E	578_T	1.503	0.76
38_D	69_P	1.503	0.76
489_L	533_S	1.502	0.76
368_F	389_G	1.496	0.76
573_I	577_I	1.495	0.76
137_A	159_R	1.490	0.75
553_P	556_N	1.488	0.75
156_V	188_I	1.474	0.75
135_V	188_I	1.462	0.74
532_E	535_E	1.459	0.74
82_G	191_H	1.443	0.73
82_G	190_M	1.428	0.72
454_W	508_H	1.378	0.69
40_G	113_D	1.378	0.69
128_T	143_T	1.376	0.69
116_G	175_V	1.369	0.69
520_Y	524_S	1.369	0.69
353_G	437_L	1.362	0.68
175_V	191_H	1.361	0.68
140_V	151_E	1.359	0.68
177_D	189_Q	1.358	0.68
222_L	523_L	1.356	0.68
85_M	316_I	1.356	0.68
206_Q	374_Y	1.354	0.68
326_D	384_S	1.354	0.68
145_D	151_E	1.352	0.68
492_E	495_R	1.345	0.67
474_I	485_E	1.341	0.67
316_I	329_L	1.341	0.67
54_T	484_P	1.341	0.67
572_E	576_Q	1.333	0.67
125_F	167_A	1.318	0.66
247_S	512_R	1.316	0.66
575_Q	579_E	1.309	0.65
227_K	253_D	1.301	0.65
464_I	494_A	1.297	0.64
119_L	191_H	1.297	0.64
90_Y	341_M	1.290	0.64
471_L	475_V	1.286	0.64
180_V	188_I	1.283	0.64
90_Y	386_S	1.282	0.64
227_K	326_D	1.269	0.63
98_D	102_D	1.269	0.63
141_V	154_V	1.268	0.63
100_L	109_D	1.267	0.63
284_T	287_P	1.264	0.62
400_E	403_T	1.254	0.62
210_E	374_Y	1.240	0.61
425_H	431_W	1.230	0.60
20_V	344_I	1.229	0.60
10_T	71_D	1.227	0.60
290_A	495_R	1.225	0.60
50_G	196_V	1.221	0.60
90_Y	114_A	1.216	0.59
168_V	181_E	1.210	0.59
277_P	478_V	1.203	0.59
236_P	418_S	1.198	0.58
551_A	580_Q	1.186	0.57
456_E	565_E	1.170	0.56
27_D	45_V	1.167	0.56
118_D	121_T	1.159	0.56
485_E	488_Q	1.153	0.55
128_T	151_E	1.149	0.55
260_I	329_L	1.147	0.55
21_V	190_M	1.145	0.55
167_A	180_V	1.144	0.55
493_V	529_L	1.129	0.54
226_A	442_L	1.125	0.53
30_M	248_L	1.123	0.53
129_V	133_D	1.120	0.53
253_D	257_V	1.119	0.53
155_L	497_I	1.115	0.53
173_F	179_V	1.105	0.52
359_A	370_E	1.103	0.52
127_P	142_G	1.100	0.52
102_D	204_D	1.097	0.51
12_E	24_T	1.095	0.51
139_D	379_N	1.094	0.51
24_T	51_D	1.092	0.51
439_K	458_R	1.089	0.51
190_M	388_I	1.076	0.50
22_T	52_V	1.064	0.49
457_Q	527_K	1.059	0.49
100_L	108_L	1.055	0.49
107_F	546_I	1.047	0.48
135_V	182_L	1.047	0.48
16_V	410_V	1.043	0.48
131_A	166_V	1.043	0.48
232_A	410_V	1.036	0.47
529_L	546_I	1.031	0.47
218_I	387_V	1.027	0.47
467_E	508_H	1.023	0.47
82_G	117_I	1.022	0.46
221_G	501_W	1.013	0.46
351_M	475_V	1.010	0.46
300_N	570_V	1.008	0.46
357_Y	473_E	1.008	0.46
182_L	185_G	1.006	0.45
48_I	430_N	1.006	0.45
108_L	112_V	1.004	0.45
80_D	115_P	1.003	0.45
409_I	426_F	1.003	0.45
79_V	312_T	0.997	0.45
13_I	181_E	0.995	0.45
218_I	428_A	0.994	0.45
567_E	577_I	0.993	0.45
480_K	488_Q	0.992	0.44
189_Q	192_Q	0.989	0.44
245_Q	328_A	0.988	0.44
225_I	423_R	0.987	0.44
166_V	169_E	0.985	0.44
422_E	426_F	0.985	0.44
35_Y	113_D	0.985	0.44
248_L	388_I	0.984	0.44
508_H	512_R	0.983	0.44
13_I	16_V	0.983	0.44
36_V	55_I	0.981	0.44
99_V	118_D	0.980	0.44
16_V	64_I	0.979	0.44
117_I	190_M	0.971	0.43
243_V	407_L	0.966	0.43
144_V	154_V	0.963	0.43
349_E	404_Q	0.962	0.42
244_T	506_A	0.960	0.42
152_H	319_Y	0.958	0.42
353_G	409_I	0.956	0.42
145_D	154_V	0.955	0.42
574_K	578_T	0.952	0.42
80_D	85_M	0.951	0.42
143_T	153_K	0.949	0.42
576_Q	580_Q	0.947	0.41
341_M	367_E	0.947	0.41
529_L	552_A	0.942	0.41
175_V	551_A	0.942	0.41
260_I	354_E	0.942	0.41
245_Q	388_I	0.940	0.41
407_L	487_Q	0.938	0.41
163_G	278_E	0.937	0.41
275_D	507_L	0.931	0.40
550_D	557_R	0.926	0.40
508_H	560_T	0.926	0.40
150_I	320_Y	0.925	0.40
11_G	26_L	0.921	0.40
464_I	527_K	0.920	0.40
311_Y	341_M	0.920	0.40
154_V	180_V	0.918	0.40
247_S	323_M	0.918	0.40
497_I	523_L	0.918	0.40
125_F	190_M	0.915	0.39
530_H	534_F	0.914	0.39
443_D	454_W	0.914	0.39
527_K	531_E	0.913	0.39
292_T	312_T	0.909	0.39
300_N	556_N	0.908	0.39
326_D	362_A	0.906	0.39
165_V	182_L	0.903	0.39
334_T	389_G	0.903	0.39
443_D	447_T	0.900	0.38
187_E	509_D	0.899	0.38
32_D	346_S	0.899	0.38
564_D	569_E	0.898	0.38
82_G	222_L	0.898	0.38
130_E	524_S	0.897	0.38
210_E	227_K	0.896	0.38
190_M	380_G	0.893	0.38
562_P	566_H	0.891	0.38
451_V	524_S	0.887	0.38
351_M	471_L	0.883	0.37
568_A	572_E	0.882	0.37
51_D	212_L	0.881	0.37
26_L	53_T	0.877	0.37
13_I	64_I	0.874	0.37
23_A	26_L	0.870	0.37
410_V	415_A	0.869	0.37
255_D	442_L	0.868	0.36
247_S	506_A	0.865	0.36
245_Q	330_M	0.865	0.36
160_S	186_E	0.863	0.36
385_I	448_D	0.863	0.36
163_G	181_E	0.861	0.36
536_A	542_P	0.860	0.36
536_A	541_V	0.860	0.36
158_P	201_P	0.860	0.36
148_V	290_A	0.859	0.36
129_V	180_V	0.858	0.36
236_P	245_Q	0.858	0.36
566_H	577_I	0.856	0.36
131_A	497_I	0.856	0.36
139_D	190_M	0.849	0.35
524_S	527_K	0.849	0.35
158_P	415_A	0.848	0.35
145_D	169_E	0.847	0.35
550_D	553_P	0.846	0.35
277_P	396_G	0.846	0.35
571_A	575_Q	0.845	0.35
471_L	492_E	0.842	0.35
219_L	244_T	0.842	0.35
570_V	577_I	0.840	0.35
457_Q	520_Y	0.839	0.35
473_E	498_R	0.836	0.34
128_T	452_D	0.836	0.34
543_V	547_T	0.836	0.34
248_L	258_V	0.835	0.34
16_V	21_V	0.834	0.34
362_A	409_I	0.833	0.34
166_V	173_F	0.832	0.34
535_E	538_D	0.831	0.34
483_L	518_K	0.830	0.34
231_A	378_F	0.829	0.34
254_A	257_V	0.828	0.34
80_D	193_E	0.827	0.34
100_L	104_M	0.826	0.34
87_D	508_H	0.824	0.34
281_D	284_T	0.824	0.34
128_T	141_V	0.822	0.34
136_A	161_D	0.821	0.34
460_W	527_K	0.817	0.33
45_V	314_I	0.817	0.33
360_Y	364_R	0.816	0.33
267_N	300_N	0.816	0.33
288_L	354_E	0.814	0.33
94_Q	175_V	0.813	0.33
120_D	174_T	0.812	0.33
119_L	175_V	0.811	0.33
46_I	330_M	0.810	0.33
272_V	328_A	0.810	0.33
486_D	538_D	0.808	0.33
521_A	570_V	0.807	0.33
94_Q	116_G	0.807	0.33
225_I	284_T	0.806	0.33
439_K	443_D	0.805	0.33
26_L	366_S	0.805	0.33
121_T	134_E	0.803	0.33
194_W	200_R	0.802	0.32
133_D	165_V	0.800	0.32
108_L	252_A	0.799	0.32
252_A	517_E	0.799	0.32
26_L	45_V	0.797	0.32
550_D	554_R	0.796	0.32
101_E	106_A	0.795	0.32
203_V	378_F	0.791	0.32
90_Y	529_L	0.791	0.32
139_D	380_G	0.788	0.32
468_E	473_E	0.787	0.32
245_Q	413_F	0.787	0.32
239_S	260_I	0.784	0.31
561_T	577_I	0.784	0.31
100_L	112_V	0.784	0.31
144_V	271_E	0.784	0.31
104_M	109_D	0.782	0.31
144_V	396_G	0.780	0.31
481_D	507_L	0.779	0.31
326_D	374_Y	0.777	0.31
21_V	48_I	0.777	0.31
131_A	165_V	0.777	0.31
47_E	54_T	0.776	0.31
55_I	304_A	0.776	0.31
284_T	493_V	0.775	0.31
140_V	153_K	0.775	0.31
367_E	386_S	0.775	0.31
209_T	448_D	0.768	0.30
355_E	424_R	0.765	0.30
13_I	169_E	0.760	0.30
490_T	537_L	0.759	0.30
447_T	455_A	0.759	0.30
64_I	213_V	0.758	0.30
529_L	555_L	0.758	0.30
64_I	341_M	0.757	0.30
266_G	339_E	0.757	0.30
429_I	565_E	0.757	0.30
233_I	472_E	0.751	0.30
124_E	173_F	0.749	0.29
386_S	422_E	0.749	0.29
117_I	559_G	0.747	0.29
389_G	406_T	0.747	0.29
447_T	453_D	0.746	0.29
496_Y	526_I	0.745	0.29
199_Q	490_T	0.744	0.29
380_G	388_I	0.743	0.29
16_V	374_Y	0.743	0.29
136_A	203_V	0.743	0.29
491_L	523_L	0.743	0.29
329_L	387_V	0.742	0.29
90_Y	527_K	0.740	0.29
15_S	47_E	0.740	0.29
29_Q	48_I	0.739	0.29
431_W	498_R	0.739	0.29
93_V	328_A	0.739	0.29
446_F	455_A	0.738	0.29
86_L	148_V	0.737	0.29
281_D	400_E	0.736	0.29
252_A	433_E	0.735	0.29
106_A	462_V	0.734	0.29
574_K	577_I	0.734	0.29
225_I	231_A	0.733	0.29
447_T	568_A	0.732	0.28
99_V	103_E	0.729	0.28
46_I	345_S	0.728	0.28
12_E	182_L	0.726	0.28
444_P	448_D	0.725	0.28
167_A	179_V	0.725	0.28
260_I	270_T	0.723	0.28
459_Q	463_D	0.722	0.28
254_A	330_M	0.722	0.28
178_T	565_E	0.721	0.28
90_Y	155_L	0.721	0.28
418_S	437_L	0.720	0.28
420_L	425_H	0.720	0.28
496_Y	552_A	0.718	0.28
30_M	417_D	0.717	0.28
105_G	368_F	0.717	0.28
419_D	422_E	0.715	0.28
289_M	415_A	0.714	0.27
121_T	212_L	0.713	0.27
524_S	574_K	0.713	0.27
451_V	456_E	0.712	0.27
562_P	570_V	0.712	0.27
346_S	360_Y	0.712	0.27
129_V	135_V	0.712	0.27
551_A	574_K	0.709	0.27
47_E	247_S	0.706	0.27
45_V	326_D	0.705	0.27
42_M	219_L	0.704	0.27
245_Q	404_Q	0.704	0.27
386_S	454_W	0.703	0.27
108_L	466_D	0.700	0.27
528_T	531_E	0.699	0.27
432_D	519_T	0.698	0.27
364_R	468_E	0.698	0.27
536_A	545_E	0.697	0.27
75_E	428_A	0.697	0.27
394_P	499_E	0.695	0.26
126_E	164_E	0.695	0.26
16_V	68_Q	0.694	0.26
277_P	498_R	0.694	0.26
271_E	385_I	0.692	0.26
102_D	177_D	0.691	0.26
80_D	116_G	0.690	0.26
568_A	575_Q	0.690	0.26
17_S	23_A	0.689	0.26
233_I	495_R	0.688	0.26
420_L	431_W	0.687	0.26
48_I	385_I	0.687	0.26
47_E	411_K	0.686	0.26
197_R	427_P	0.686	0.26
473_E	522_I	0.686	0.26
239_S	428_A	0.685	0.26
105_G	282_P	0.685	0.26
125_F	154_V	0.684	0.26
274_E	290_A	0.684	0.26
521_A	567_E	0.683	0.26
58_Y	188_I	0.683	0.26
239_S	418_S	0.681	0.26
433_E	570_V	0.681	0.26
79_V	169_E	0.681	0.26
463_D	467_E	0.680	0.26
415_A	484_P	0.679	0.26
66_P	527_K	0.679	0.26
257_V	529_L	0.679	0.26
270_T	349_E	0.678	0.26
244_T	385_I	0.677	0.26
40_G	64_I	0.676	0.26
150_I	257_V	0.674	0.25
426_F	562_P	0.673	0.25
553_P	557_R	0.673	0.25
64_I	576_Q	0.672	0.25
396_G	432_D	0.672	0.25
405_N	409_I	0.671	0.25
282_P	288_L	0.671	0.25
256_I	325_Y	0.668	0.25
175_V	275_D	0.666	0.25
14_E	24_T	0.666	0.25
208_P	367_E	0.666	0.25
547_T	552_A	0.666	0.25
189_Q	207_T	0.666	0.25
290_A	377_N	0.665	0.25
323_M	349_E	0.665	0.25
304_A	349_E	0.664	0.25
182_L	188_I	0.664	0.25
236_P	508_H	0.663	0.25
79_V	277_P	0.661	0.25
48_I	52_V	0.660	0.25
270_T	328_A	0.659	0.25
376_E	382_E	0.659	0.25
480_K	491_L	0.659	0.25
385_I	507_L	0.659	0.25
147_T	150_I	0.659	0.25
30_M	425_H	0.658	0.25
129_V	167_A	0.656	0.24
571_A	574_K	0.654	0.24
128_T	164_E	0.653	0.24
187_E	463_D	0.653	0.24
464_I	530_H	0.652	0.24
415_A	433_E	0.652	0.24
541_V	549_I	0.652	0.24
445_W	450_V	0.651	0.24
251_F	512_R	0.651	0.24
278_E	507_L	0.651	0.24
556_N	562_P	0.651	0.24
431_W	468_E	0.651	0.24
549_I	580_Q	0.648	0.24
247_S	251_F	0.647	0.24
277_P	289_M	0.647	0.24
528_T	574_K	0.647	0.24
17_S	387_V	0.645	0.24
86_L	256_I	0.645	0.24
564_D	567_E	0.643	0.24
398_F	547_T	0.643	0.24
276_F	348_L	0.642	0.24
573_I	576_Q	0.641	0.24
385_I	422_E	0.640	0.24
208_P	226_A	0.640	0.24
271_E	514_C	0.640	0.24
210_E	386_S	0.639	0.24
354_E	424_R	0.639	0.24
472_E	476_Q	0.638	0.24
32_D	552_A	0.637	0.24
73_T	496_Y	0.637	0.24
159_R	186_E	0.636	0.24
85_M	207_T	0.636	0.24
105_G	404_Q	0.635	0.23
254_A	270_T	0.635	0.23
239_S	403_T	0.634	0.23
233_I	412_T	0.633	0.23
21_V	417_D	0.632	0.23
191_H	316_I	0.632	0.23
178_T	577_I	0.632	0.23
423_R	426_F	0.631	0.23
232_A	255_D	0.630	0.23
188_I	444_P	0.630	0.23
30_M	476_Q	0.629	0.23
256_I	448_D	0.629	0.23
21_V	116_G	0.629	0.23
281_D	355_E	0.629	0.23
280_P	329_L	0.628	0.23
120_D	177_D	0.627	0.23
18_G	483_L	0.626	0.23
542_P	545_E	0.626	0.23
239_S	245_Q	0.625	0.23
450_V	520_Y	0.625	0.23
323_M	501_W	0.624	0.23
33_V	514_C	0.624	0.23
386_S	523_L	0.624	0.23
334_T	406_T	0.623	0.23
107_F	320_Y	0.622	0.23
516_P	525_G	0.621	0.23
254_A	458_R	0.619	0.23
135_V	159_R	0.619	0.23
151_E	255_D	0.619	0.23
260_I	272_V	0.619	0.23
100_L	421_A	0.618	0.23
257_V	386_S	0.617	0.23
53_T	78_T	0.616	0.23
551_A	576_Q	0.616	0.23
41_L	59_E	0.616	0.23
230_T	300_N	0.614	0.22
445_W	525_G	0.614	0.22
368_F	387_V	0.613	0.22
212_L	458_R	0.612	0.22
117_I	498_R	0.612	0.22
357_Y	485_E	0.611	0.22
34_V	405_N	0.610	0.22
100_L	137_A	0.610	0.22
399_S	435_Y	0.609	0.22
164_E	535_E	0.609	0.22
120_D	130_E	0.606	0.22
231_A	498_R	0.605	0.22
51_D	375_F	0.605	0.22
351_M	394_P	0.604	0.22
367_E	494_A	0.603	0.22
320_Y	323_M	0.603	0.22
286_N	295_I	0.602	0.22
10_T	448_D	0.602	0.22
405_N	487_Q	0.601	0.22
432_D	469_S	0.601	0.22
45_V	271_E	0.601	0.22
431_W	473_E	0.600	0.22
363_A	409_I	0.600	0.22
245_Q	519_T	0.599	0.22
172_T	535_E	0.599	0.22
85_M	419_D	0.599	0.22
441_Q	458_R	0.599	0.22
72_N	446_F	0.598	0.22
253_D	283_Q	0.597	0.22
212_L	254_A	0.596	0.22
32_D	271_E	0.596	0.22
222_L	488_Q	0.596	0.22
490_T	494_A	0.595	0.22
71_D	126_E	0.595	0.22
460_W	565_E	0.594	0.22
500_A	556_N	0.594	0.22
247_S	513_Y	0.593	0.22
40_G	428_A	0.592	0.21
178_T	572_E	0.592	0.21
254_A	328_A	0.592	0.21
256_I	405_N	0.591	0.21
226_A	432_D	0.591	0.21
80_D	117_I	0.590	0.21
90_Y	445_W	0.590	0.21
233_I	317_A	0.589	0.21
339_E	397_D	0.589	0.21
27_D	116_G	0.589	0.21
239_S	429_I	0.587	0.21
93_V	294_L	0.586	0.21
282_P	355_E	0.585	0.21
244_T	400_E	0.585	0.21
74_G	285_G	0.584	0.21
107_F	230_T	0.584	0.21
89_I	257_V	0.584	0.21
153_K	325_Y	0.583	0.21
12_E	122_D	0.582	0.21
216_Q	328_A	0.582	0.21
232_A	409_I	0.582	0.21
311_Y	403_T	0.582	0.21
420_L	483_L	0.582	0.21
544_E	547_T	0.582	0.21
341_M	353_G	0.580	0.21
261_G	269_M	0.580	0.21
172_T	179_V	0.580	0.21
157_P	396_G	0.580	0.21
79_V	294_L	0.579	0.21
555_L	559_G	0.579	0.21
353_G	562_P	0.579	0.21
93_V	245_Q	0.579	0.21
190_M	491_L	0.578	0.21
271_E	290_A	0.577	0.21
565_E	568_A	0.577	0.21
158_P	244_T	0.576	0.21
411_K	418_S	0.576	0.21
271_E	277_P	0.576	0.21
90_Y	100_L	0.576	0.21
129_V	182_L	0.575	0.21
495_R	498_R	0.575	0.21
349_E	481_D	0.574	0.21
439_K	455_A	0.574	0.21
90_Y	295_I	0.574	0.21
116_G	533_S	0.574	0.21
454_W	480_K	0.573	0.21
135_V	154_V	0.573	0.21
546_I	549_I	0.573	0.21
68_Q	518_K	0.572	0.21
421_A	428_A	0.572	0.21
85_M	210_E	0.571	0.21
259_Y	269_M	0.571	0.21
87_D	293_T	0.570	0.20
562_P	567_E	0.570	0.20
289_M	396_G	0.569	0.20
409_I	500_A	0.569	0.20
330_M	522_I	0.569	0.20
203_V	456_E	0.569	0.20
196_V	277_P	0.566	0.20
175_V	440_D	0.566	0.20
239_S	484_P	0.566	0.20
175_V	579_E	0.565	0.20
535_E	568_A	0.564	0.20
543_V	549_I	0.563	0.20
448_D	452_D	0.563	0.20
248_L	329_L	0.563	0.20
173_F	423_R	0.562	0.20
76_P	388_I	0.562	0.20
230_T	503_Q	0.561	0.20
577_I	580_Q	0.561	0.20
380_G	423_R	0.560	0.20
131_A	325_Y	0.560	0.20
108_L	287_P	0.559	0.20
115_P	119_L	0.558	0.20
453_D	457_Q	0.558	0.20
244_T	271_E	0.558	0.20
308_S	312_T	0.558	0.20
175_V	190_M	0.557	0.20
271_E	507_L	0.557	0.20
16_V	254_A	0.557	0.20
34_V	162_G	0.557	0.20
423_R	462_V	0.556	0.20
432_D	494_A	0.556	0.20
403_T	503_Q	0.555	0.20
15_S	20_V	0.555	0.20
446_F	490_T	0.555	0.20
85_M	492_E	0.555	0.20
493_V	496_Y	0.554	0.20
442_L	476_Q	0.553	0.20
39_E	365_L	0.553	0.20
411_K	484_P	0.553	0.20
569_E	574_K	0.552	0.20
178_T	381_T	0.551	0.20
552_A	556_N	0.549	0.20
566_H	571_A	0.549	0.20
119_L	271_E	0.549	0.20
266_G	397_D	0.549	0.20
104_M	450_V	0.548	0.20
13_I	108_L	0.548	0.20
53_T	271_E	0.547	0.19
179_V	484_P	0.547	0.19
365_L	410_V	0.546	0.19
249_A	363_A	0.545	0.19
256_I	400_E	0.544	0.19
148_V	182_L	0.544	0.19
403_T	485_E	0.543	0.19
27_D	48_I	0.543	0.19
261_G	397_D	0.542	0.19
12_E	99_V	0.542	0.19
415_A	509_D	0.542	0.19
541_V	546_I	0.541	0.19
156_V	160_S	0.541	0.19
234_P	237_F	0.541	0.19
232_A	334_T	0.540	0.19
325_Y	431_W	0.540	0.19
173_F	190_M	0.540	0.19
247_S	429_I	0.540	0.19
239_S	354_E	0.540	0.19
27_D	316_I	0.539	0.19
447_T	579_E	0.539	0.19
90_Y	279_L	0.539	0.19
232_A	406_T	0.538	0.19
252_A	326_D	0.538	0.19
243_V	437_L	0.537	0.19
222_L	385_I	0.537	0.19
349_E	438_Y	0.537	0.19
93_V	269_M	0.536	0.19
32_D	278_E	0.536	0.19
49_E	484_P	0.536	0.19
239_S	248_L	0.535	0.19
480_K	514_C	0.535	0.19
344_I	348_L	0.534	0.19
468_E	494_A	0.534	0.19
406_T	410_V	0.534	0.19
541_V	577_I	0.534	0.19
243_V	487_Q	0.533	0.19
23_A	320_Y	0.531	0.19
22_T	500_A	0.531	0.19
267_N	435_Y	0.530	0.19
252_A	384_S	0.530	0.19
386_S	442_L	0.530	0.19
152_H	320_Y	0.530	0.19
249_A	270_T	0.530	0.19
35_Y	255_D	0.530	0.19
60_E	231_A	0.528	0.19
20_V	108_L	0.528	0.19
12_E	565_E	0.528	0.19
177_D	219_L	0.528	0.19
341_M	481_D	0.528	0.19
156_V	178_T	0.528	0.19
447_T	565_E	0.527	0.19
328_A	349_E	0.527	0.19
367_E	385_I	0.527	0.19
68_Q	444_P	0.527	0.19
326_D	458_R	0.527	0.19
539_A	542_P	0.527	0.19
233_I	555_L	0.526	0.19
79_V	110_R	0.526	0.19
570_V	575_Q	0.526	0.19
182_L	575_Q	0.525	0.19
231_A	386_S	0.525	0.19
294_L	413_F	0.525	0.19
85_M	549_I	0.525	0.19
32_D	74_G	0.525	0.19
405_N	446_F	0.524	0.19
404_Q	411_K	0.524	0.19
330_M	518_K	0.524	0.19
385_I	446_F	0.524	0.19
353_G	418_S	0.524	0.19
109_D	185_G	0.524	0.19
194_W	201_P	0.524	0.19
277_P	294_L	0.523	0.18
219_L	476_Q	0.523	0.18
251_F	437_L	0.523	0.18
38_D	136_A	0.523	0.18
27_D	546_I	0.522	0.18
254_A	384_S	0.520	0.18
82_G	175_V	0.520	0.18
229_G	438_Y	0.520	0.18
568_A	571_A	0.520	0.18
250_K	330_M	0.520	0.18
46_I	68_Q	0.520	0.18
259_Y	390_A	0.519	0.18
269_M	296_A	0.518	0.18
75_E	232_A	0.518	0.18
105_G	273_I	0.516	0.18
87_D	554_R	0.516	0.18
131_A	169_E	0.515	0.18
80_D	478_V	0.515	0.18
135_V	180_V	0.515	0.18
156_V	164_E	0.515	0.18
85_M	164_E	0.514	0.18
397_D	420_L	0.514	0.18
569_E	579_E	0.513	0.18
282_P	508_H	0.512	0.18
232_A	415_A	0.512	0.18
77_L	196_V	0.512	0.18
550_D	580_Q	0.511	0.18
357_Y	437_L	0.511	0.18
218_I	233_I	0.510	0.18
455_A	459_Q	0.510	0.18
110_R	470_E	0.510	0.18
60_E	110_R	0.509	0.18
35_Y	225_I	0.508	0.18
77_L	427_P	0.508	0.18
239_S	244_T	0.508	0.18
42_M	93_V	0.508	0.18
147_T	411_K	0.507	0.18
328_A	363_A	0.506	0.18
40_G	209_T	0.506	0.18
110_R	426_F	0.506	0.18
528_T	532_E	0.505	0.18
567_E	570_V	0.505	0.18
267_N	339_E	0.505	0.18
23_A	31_N	0.505	0.18
535_E	548_S	0.505	0.18
521_A	525_G	0.505	0.18
201_P	526_I	0.505	0.18
212_L	442_L	0.505	0.18
426_F	564_D	0.504	0.18
244_T	429_I	0.504	0.18
462_V	519_T	0.504	0.18
141_V	257_V	0.504	0.18
150_I	227_K	0.503	0.18
223_F	327_V	0.503	0.18
492_E	508_H	0.502	0.18
377_N	464_I	0.502	0.18
24_T	567_E	0.502	0.18
80_D	426_F	0.501	0.18
74_G	193_E	0.501	0.18
86_L	472_E	0.501	0.18
357_Y	431_W	0.500	0.18
453_D	456_E	0.500	0.18
277_P	508_H	0.500	0.18

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3mfyA	1	0.8564	100	0.327	Contact Map
3vr4A	1	0.9863	100	0.337	Contact Map
3gqbA	1	0.9846	100	0.341	Contact Map
3j9tA	1	0.9829	100	0.343	Contact Map
3vr4D	1	0.7487	100	0.592	Contact Map
3j9tB	1	0.7402	100	0.598	Contact Map
3gqbB	1	0.747	100	0.601	Contact Map
2c61A	2	0.7197	100	0.606	Contact Map
3oaaA	2	0.788	100	0.608	Contact Map
1fx0B	3	0.7607	100	0.608	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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