Q9HNB2 - HALSA - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

Q9HNB2 - DNA repair protein

UniProt:	Q9HNB2	Sequences: MLDAYQLAAKVVRTCRYCAGRGRYSPLTAETAIEADGEFICRDCAVEELERELSFSGAVSGAAQDRLEELLFAEQDLEKVTGLLGGELDPDLTKYDEVSATTDDVDPVAVSELDLHPDVQGLFEDRFEELLPVQSLAVENGLVEGDDQMVVSATATGKTLVGEIAGLHRLQSGNGKLLFLVPLVALANQKHEDFQDEYGHLANVTIRVGSSRIRDDGHAFDPAADIIVGTYEGIDHALRTGRDLGDIGTVVIDEVHTLKEDDRGHRLDGLISRLKYYCEQRREERAGYDGAQWVYLSATVGNPGELAGKLRANLVEFEERPVPIERHVTFADGAEKPDIENTLVRREFDQESSMGYRGQTIIFTNSRRRCNEISRKLDYPSRPYHAGLDYGERKSVERQFGDQDLAAVVTTAALAAGVDFPANQVIFDTLAMGIEWLSVQEFEQMLGRAGRPDYHDRGKVYVLVEPDASYHSSMEGTEEEIAFTLLKGDMENVVTHYDEDAAVEETLANVTVGGTAAKRLNDRMVGDIPTKHALGKLLEYEFIDGLEPTDRGRAVTTHFLDPDSAFRILDGVRKGHAPGRIIATLELREDDQ	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	592 (473)
Sequences:	6627 (4538)
Seq/√Len:	208.6

ECOLI - YFJK DEAD RECQ RECG YEJH RAPA DBPA SRMB RHLE RHLB
BACSU - YPRA RECG RECQ CSHA DBPA RECS COMFA YWQA CSHB YFML
HALSA - Q9HNB2 HELS Q9HN80 RAD25 Q9HQA5 O52003 Q9HMW5 O51997
SULSO - HELS Q981C8 HELX Q97ZF9 Q980C0 Q97X74 Q97YC4 Q97Y93 Q97WW1 Q97ZF3 Q97ZV2

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
480_E	483_F	4.049	1.00
477_T	480_E	3.667	1.00
480_E	485_L	3.632	1.00
479_E	482_A	3.560	1.00
163_E	194_F	3.266	1.00
336_K	340_E	2.758	1.00
478_E	481_I	2.718	1.00
480_E	484_T	2.498	1.00
66_R	69_E	2.490	1.00
477_T	483_F	2.397	1.00
122_L	125_D	2.391	1.00
364_T	373_I	2.383	1.00
166_G	177_L	2.379	1.00
67_L	70_L	2.322	1.00
479_E	483_F	2.286	1.00
504_E	508_A	2.277	1.00
477_T	485_L	2.269	1.00
506_T	511_T	2.204	1.00
478_E	483_F	2.189	1.00
336_K	339_I	2.169	1.00
120_Q	123_F	2.152	1.00
425_V	428_D	2.144	1.00
71_L	75_Q	2.132	1.00
41_C	44_C	2.123	1.00
40_I	43_D	2.108	1.00
75_Q	78_E	2.098	1.00
72_F	75_Q	2.078	1.00
81_T	84_L	2.077	1.00
69_E	72_F	2.075	1.00
512_V	516_A	2.044	1.00
84_L	87_E	2.012	1.00
229_G	234_I	2.009	1.00
64_Q	67_L	1.996	1.00
364_T	409_V	1.977	1.00
511_T	515_T	1.974	1.00
194_F	226_I	1.964	1.00
83_L	86_G	1.963	1.00
511_T	514_G	1.927	1.00
40_I	44_C	1.923	1.00
121_G	125_D	1.911	1.00
481_I	485_L	1.910	1.00
491_E	494_V	1.902	1.00
538_L	541_E	1.901	1.00
533_A	537_L	1.888	1.00
478_E	482_A	1.875	1.00
255_V	295_Y	1.875	1.00
340_E	343_L	1.874	1.00
531_K	534_L	1.872	1.00
65_D	68_E	1.867	1.00
382_R	405_L	1.863	1.00
77_L	80_V	1.853	1.00
482_A	485_L	1.847	1.00
479_E	485_L	1.826	1.00
71_L	74_E	1.817	1.00
536_K	540_Y	1.815	1.00
74_E	80_V	1.802	1.00
76_D	79_K	1.792	1.00
116_H	168_H	1.790	1.00
493_V	496_H	1.788	1.00
478_E	484_T	1.750	1.00
499_E	503_V	1.749	1.00
81_T	85_G	1.736	1.00
70_L	74_E	1.736	1.00
506_T	510_V	1.726	1.00
64_Q	68_E	1.720	1.00
66_R	70_L	1.719	1.00
74_E	77_L	1.715	1.00
506_T	509_N	1.705	1.00
529_P	533_A	1.702	1.00
364_T	370_C	1.696	1.00
490_M	496_H	1.686	1.00
181_V	190_K	1.653	1.00
67_L	71_L	1.629	1.00
504_E	507_L	1.626	1.00
477_T	482_A	1.617	1.00
507_L	511_T	1.616	1.00
499_E	502_A	1.613	1.00
85_G	88_L	1.586	1.00
503_V	509_N	1.585	1.00
510_V	515_T	1.583	1.00
510_V	514_G	1.580	1.00
425_V	461_Y	1.578	1.00
478_E	485_L	1.572	1.00
92_L	96_D	1.565	1.00
470_Y	473_S	1.549	1.00
500_D	503_V	1.543	1.00
519_R	522_D	1.534	1.00
504_E	511_T	1.533	1.00
85_G	89_D	1.532	1.00
74_E	78_E	1.517	1.00
536_K	539_E	1.499	1.00
80_V	83_L	1.495	1.00
503_V	510_V	1.490	1.00
367_R	387_G	1.473	1.00
504_E	510_V	1.468	1.00
82_G	85_G	1.452	1.00
547_E	550_D	1.452	1.00
553_R	556_T	1.449	1.00
534_L	538_L	1.432	1.00
537_L	542_F	1.430	1.00
532_H	536_K	1.428	1.00
70_L	73_A	1.418	1.00
509_N	514_G	1.417	1.00
162_G	190_K	1.417	1.00
494_V	497_Y	1.414	1.00
540_Y	543_I	1.411	1.00
68_E	72_F	1.406	1.00
87_E	90_P	1.405	1.00
510_V	513_G	1.404	1.00
522_D	526_G	1.404	1.00
67_L	73_A	1.401	1.00
76_D	80_V	1.397	1.00
531_K	535_G	1.394	1.00
95_Y	98_V	1.388	1.00
121_G	124_E	1.384	1.00
500_D	509_N	1.376	1.00
70_L	75_Q	1.364	1.00
525_V	529_P	1.361	1.00
180_L	229_G	1.355	1.00
537_L	541_E	1.353	1.00
526_G	533_A	1.350	1.00
358_G	424_Q	1.350	1.00
340_E	344_V	1.347	1.00
537_L	540_Y	1.343	1.00
321_P	324_I	1.342	1.00
519_R	523_R	1.337	1.00
120_Q	124_E	1.332	1.00
336_K	343_L	1.328	1.00
339_I	342_T	1.326	1.00
503_V	514_G	1.325	1.00
487_K	490_M	1.323	1.00
477_T	484_T	1.323	1.00
489_D	493_V	1.322	1.00
503_V	511_T	1.318	1.00
97_E	101_T	1.314	1.00
490_M	494_V	1.312	1.00
191_H	195_Q	1.309	1.00
489_D	492_N	1.306	1.00
75_Q	81_T	1.303	1.00
78_E	82_G	1.300	1.00
414_L	418_V	1.298	1.00
523_R	528_I	1.297	1.00
498_D	506_T	1.293	1.00
224_A	227_I	1.289	1.00
522_D	533_A	1.285	1.00
395_S	399_Q	1.285	1.00
477_T	481_I	1.277	1.00
498_D	502_A	1.276	1.00
481_I	484_T	1.275	1.00
64_Q	69_E	1.269	1.00
362_I	427_F	1.268	1.00
73_A	76_D	1.265	1.00
526_G	537_L	1.260	1.00
534_L	537_L	1.259	1.00
503_V	506_T	1.257	1.00
535_G	538_L	1.255	1.00
490_M	493_V	1.253	1.00
473_S	476_G	1.252	1.00
98_V	102_T	1.251	1.00
77_L	81_T	1.240	1.00
532_H	538_L	1.236	1.00
92_L	95_Y	1.235	1.00
335_E	339_I	1.231	1.00
500_D	504_E	1.229	1.00
80_V	86_G	1.227	1.00
508_A	511_T	1.225	1.00
544_D	547_E	1.214	1.00
528_I	532_H	1.204	1.00
550_D	553_R	1.202	1.00
489_D	496_H	1.202	1.00
529_P	537_L	1.199	1.00
546_L	550_D	1.192	1.00
304_G	308_G	1.190	1.00
545_G	550_D	1.188	1.00
65_D	69_E	1.187	1.00
115_L	118_D	1.184	1.00
533_A	536_K	1.184	1.00
81_T	87_E	1.182	1.00
479_E	484_T	1.181	1.00
500_D	510_V	1.177	1.00
117_P	120_Q	1.174	1.00
527_D	541_E	1.174	1.00
102_T	106_D	1.174	1.00
534_L	541_E	1.173	1.00
72_F	76_D	1.173	1.00
551_R	555_V	1.169	1.00
525_V	532_H	1.167	1.00
191_H	206_I	1.164	1.00
69_E	73_A	1.157	1.00
96_D	99_S	1.154	1.00
545_G	548_P	1.146	1.00
79_K	82_G	1.145	1.00
59_V	81_T	1.140	1.00
500_D	508_A	1.137	1.00
506_T	512_V	1.133	1.00
535_G	543_I	1.131	1.00
529_P	540_Y	1.130	1.00
507_L	514_G	1.129	1.00
73_A	78_E	1.125	1.00
537_L	543_I	1.124	1.00
446_L	460_V	1.122	1.00
526_G	534_L	1.121	1.00
508_A	513_G	1.118	1.00
544_D	549_T	1.114	1.00
527_D	531_K	1.111	1.00
305_E	310_L	1.105	1.00
82_G	86_G	1.103	1.00
502_A	508_A	1.103	1.00
528_I	536_K	1.099	1.00
492_N	496_H	1.096	1.00
531_K	538_L	1.095	1.00
94_K	98_V	1.092	1.00
526_G	530_T	1.092	1.00
65_D	77_L	1.091	1.00
80_V	84_L	1.089	1.00
486_L	497_Y	1.085	1.00
546_L	549_T	1.085	1.00
533_A	538_L	1.084	1.00
374_S	409_V	1.081	1.00
84_L	89_D	1.079	1.00
501_A	504_E	1.077	1.00
94_K	97_E	1.076	1.00
491_E	495_T	1.071	1.00
68_E	71_L	1.070	1.00
203_N	223_A	1.070	1.00
507_L	510_V	1.069	1.00
86_G	89_D	1.067	1.00
76_D	82_G	1.065	1.00
512_V	515_T	1.061	1.00
539_E	543_I	1.060	1.00
190_K	193_D	1.058	1.00
552_G	556_T	1.057	1.00
472_S	475_E	1.056	1.00
69_E	74_E	1.056	1.00
488_G	494_V	1.053	1.00
101_T	105_V	1.052	1.00
526_G	529_P	1.051	1.00
119_V	122_L	1.045	1.00
508_A	515_T	1.043	1.00
530_T	537_L	1.042	1.00
75_Q	80_V	1.040	1.00
59_V	64_Q	1.039	1.00
499_E	511_T	1.037	1.00
254_E	448_R	1.035	1.00
508_A	514_G	1.031	1.00
500_D	507_L	1.027	1.00
334_A	337_P	1.027	1.00
500_D	511_T	1.025	1.00
501_A	505_E	1.025	1.00
534_L	540_Y	1.021	1.00
487_K	491_E	1.021	1.00
142_L	148_Q	1.019	1.00
471_H	475_E	1.018	1.00
529_P	532_H	1.015	1.00
95_Y	100_A	1.015	1.00
373_I	409_V	1.014	1.00
448_R	451_R	1.013	1.00
531_K	536_K	1.011	1.00
525_V	537_L	1.009	1.00
505_E	509_N	1.009	1.00
532_H	537_L	1.008	1.00
509_N	515_T	1.006	1.00
379_Y	407_A	1.000	1.00
506_T	515_T	0.998	1.00
113_L	117_P	0.993	1.00
341_N	345_R	0.992	1.00
169_R	173_G	0.988	1.00
504_E	514_G	0.982	1.00
501_A	506_T	0.981	1.00
71_L	76_D	0.979	1.00
546_L	551_R	0.978	1.00
474_M	478_E	0.976	1.00
552_G	555_V	0.975	1.00
517_A	520_L	0.972	1.00
530_T	539_E	0.969	1.00
84_L	88_L	0.968	1.00
64_Q	70_L	0.968	1.00
328_V	331_A	0.968	1.00
339_I	343_L	0.967	1.00
333_G	339_I	0.965	1.00
66_R	72_F	0.963	1.00
472_S	476_G	0.963	1.00
522_D	529_P	0.963	1.00
83_L	87_E	0.959	1.00
498_D	503_V	0.959	1.00
142_L	294_V	0.957	1.00
102_T	105_V	0.955	1.00
533_A	540_Y	0.955	1.00
78_E	86_G	0.955	1.00
425_V	430_L	0.951	0.99
68_E	74_E	0.949	0.99
70_L	77_L	0.948	0.99
75_Q	79_K	0.944	0.99
80_V	85_G	0.943	0.99
526_G	532_H	0.939	0.99
505_E	508_A	0.938	0.99
486_L	489_D	0.938	0.99
548_P	554_A	0.936	0.99
549_T	552_G	0.935	0.99
551_R	554_A	0.934	0.99
194_F	228_V	0.933	0.99
522_D	525_V	0.932	0.99
141_G	148_Q	0.930	0.99
116_H	119_V	0.929	0.99
122_L	160_L	0.927	0.99
525_V	531_K	0.927	0.99
423_N	428_D	0.925	0.99
116_H	121_G	0.922	0.99
526_G	531_K	0.921	0.99
493_V	497_Y	0.919	0.99
374_S	381_S	0.919	0.99
41_C	58_A	0.919	0.99
425_V	429_T	0.917	0.99
536_K	542_F	0.916	0.99
498_D	508_A	0.913	0.99
205_T	224_A	0.910	0.99
398_R	402_D	0.910	0.99
532_H	535_G	0.908	0.99
93_T	97_E	0.908	0.99
511_T	516_A	0.907	0.99
500_D	514_G	0.906	0.99
470_Y	474_M	0.904	0.99
525_V	533_A	0.904	0.99
72_F	86_G	0.901	0.99
526_G	535_G	0.899	0.99
529_P	534_L	0.899	0.99
178_L	247_I	0.899	0.99
506_T	514_G	0.898	0.99
549_T	553_R	0.894	0.99
78_E	84_L	0.894	0.99
545_G	549_T	0.891	0.99
104_D	107_P	0.891	0.99
72_F	80_V	0.891	0.99
74_E	89_D	0.888	0.99
548_P	552_G	0.887	0.99
533_A	539_E	0.887	0.99
534_L	542_F	0.886	0.99
118_D	123_F	0.883	0.99
133_V	150_V	0.883	0.99
526_G	543_I	0.882	0.99
523_R	529_P	0.882	0.99
335_E	338_D	0.881	0.99
538_L	542_F	0.880	0.99
340_E	345_R	0.876	0.99
190_K	194_F	0.874	0.99
72_F	78_E	0.874	0.99
183_L	232_E	0.872	0.99
524_M	531_K	0.871	0.99
500_D	505_E	0.870	0.99
527_D	536_K	0.867	0.99
81_T	88_L	0.867	0.99
394_K	398_R	0.866	0.99
498_D	510_V	0.866	0.99
91_D	98_V	0.863	0.99
471_H	474_M	0.856	0.99
504_E	509_N	0.856	0.99
532_H	540_Y	0.855	0.99
529_P	541_E	0.852	0.99
523_R	530_T	0.849	0.99
389_D	392_E	0.848	0.99
491_E	497_Y	0.847	0.99
256_H	416_A	0.846	0.99
74_E	79_K	0.846	0.99
334_A	339_I	0.845	0.99
69_E	75_Q	0.845	0.99
314_L	317_F	0.844	0.99
79_K	89_D	0.844	0.99
93_T	96_D	0.844	0.99
501_A	507_L	0.843	0.99
66_R	71_L	0.843	0.99
101_T	107_P	0.841	0.99
100_A	105_V	0.839	0.99
424_Q	430_L	0.836	0.99
96_D	101_T	0.835	0.99
315_V	318_E	0.835	0.99
100_A	108_V	0.833	0.99
93_T	98_V	0.832	0.99
94_K	99_S	0.830	0.99
175_G	248_G	0.828	0.99
70_L	85_G	0.827	0.99
207_R	237_A	0.827	0.99
324_I	327_H	0.825	0.99
84_L	90_P	0.824	0.99
525_V	528_I	0.823	0.99
487_K	494_V	0.822	0.99
73_A	80_V	0.821	0.98
137_A	161_V	0.821	0.98
382_R	399_Q	0.820	0.98
531_K	537_L	0.819	0.98
517_A	522_D	0.818	0.98
130_L	134_Q	0.818	0.98
95_Y	101_T	0.816	0.98
532_H	543_I	0.816	0.98
527_D	532_H	0.815	0.98
410_T	414_L	0.812	0.98
65_D	76_D	0.810	0.98
139_E	144_E	0.807	0.98
70_L	81_T	0.807	0.98
66_R	73_A	0.806	0.98
79_K	84_L	0.805	0.98
325_E	459_K	0.805	0.98
73_A	83_L	0.805	0.98
76_D	81_T	0.800	0.98
181_V	187_A	0.797	0.98
530_T	534_L	0.797	0.98
83_L	89_D	0.796	0.98
377_L	409_V	0.796	0.98
59_V	70_L	0.792	0.98
522_D	538_L	0.790	0.98
80_V	88_L	0.790	0.98
72_F	84_L	0.789	0.98
94_K	102_T	0.789	0.98
517_A	523_R	0.789	0.98
159_T	190_K	0.788	0.98
521_N	528_I	0.786	0.98
69_E	78_E	0.784	0.98
64_Q	75_Q	0.783	0.98
91_D	94_K	0.783	0.98
520_L	523_R	0.783	0.98
98_V	101_T	0.781	0.98
489_D	495_T	0.779	0.98
505_E	511_T	0.779	0.98
508_A	512_V	0.778	0.98
498_D	501_A	0.776	0.98
100_A	104_D	0.775	0.98
486_L	490_M	0.774	0.98
75_Q	82_G	0.774	0.98
548_P	551_R	0.772	0.98
115_L	119_V	0.768	0.98
529_P	542_F	0.768	0.98
176_K	246_D	0.767	0.98
382_R	396_V	0.767	0.98
335_E	341_N	0.767	0.98
78_E	89_D	0.764	0.98
470_Y	475_E	0.762	0.98
523_R	526_G	0.760	0.98
183_L	416_A	0.757	0.97
100_A	103_D	0.755	0.97
359_Q	422_A	0.754	0.97
74_E	81_T	0.753	0.97
491_E	496_H	0.753	0.97
91_D	95_Y	0.753	0.97
74_E	82_G	0.751	0.97
372_E	376_K	0.751	0.97
544_D	551_R	0.750	0.97
103_D	107_P	0.750	0.97
113_L	116_H	0.749	0.97
492_N	495_T	0.748	0.97
176_K	225_D	0.746	0.97
527_D	537_L	0.745	0.97
113_L	118_D	0.742	0.97
67_L	74_E	0.739	0.97
76_D	83_L	0.737	0.97
498_D	505_E	0.736	0.97
70_L	89_D	0.734	0.97
127_F	160_L	0.733	0.97
99_S	103_D	0.730	0.97
95_Y	102_T	0.730	0.97
76_D	85_G	0.730	0.97
503_V	513_G	0.729	0.97
71_L	82_G	0.729	0.97
529_P	539_E	0.727	0.97
78_E	81_T	0.725	0.97
108_V	112_E	0.725	0.97
98_V	103_D	0.724	0.97
332_D	336_K	0.723	0.97
546_L	552_G	0.721	0.97
81_T	86_G	0.721	0.97
77_L	84_L	0.720	0.97
64_Q	72_F	0.719	0.97
316_E	319_E	0.717	0.96
118_D	122_L	0.717	0.96
498_D	509_N	0.716	0.96
499_E	506_T	0.715	0.96
500_D	512_V	0.715	0.96
501_A	515_T	0.712	0.96
524_M	543_I	0.712	0.96
218_H	221_D	0.711	0.96
506_T	516_A	0.708	0.96
336_K	341_N	0.706	0.96
215_D	218_H	0.706	0.96
102_T	107_P	0.705	0.96
67_L	78_E	0.705	0.96
522_D	539_E	0.705	0.96
550_D	554_A	0.704	0.96
533_A	543_I	0.703	0.96
69_E	80_V	0.703	0.96
95_Y	105_V	0.703	0.96
72_F	79_K	0.703	0.96
531_K	541_E	0.703	0.96
83_L	88_L	0.702	0.96
113_L	125_D	0.702	0.96
264_G	268_D	0.702	0.96
503_V	507_L	0.700	0.96
520_L	527_D	0.699	0.96
217_G	220_F	0.698	0.96
488_G	491_E	0.697	0.96
250_V	274_L	0.696	0.96
205_T	219_A	0.696	0.96
535_G	540_Y	0.696	0.96
91_D	101_T	0.696	0.96
76_D	87_E	0.692	0.96
361_I	410_T	0.692	0.96
91_D	99_S	0.688	0.96
92_L	100_A	0.688	0.96
64_Q	71_L	0.687	0.96
73_A	84_L	0.686	0.95
530_T	533_A	0.685	0.95
77_L	87_E	0.681	0.95
67_L	72_F	0.680	0.95
503_V	512_V	0.679	0.95
336_K	344_V	0.677	0.95
500_D	506_T	0.675	0.95
550_D	555_V	0.675	0.95
371_N	383_P	0.675	0.95
75_Q	83_L	0.674	0.95
470_Y	476_G	0.673	0.95
150_V	161_V	0.671	0.95
94_K	100_A	0.670	0.95
534_L	543_I	0.670	0.95
502_A	509_N	0.670	0.95
167_L	198_Y	0.670	0.95
216_D	219_A	0.670	0.95
491_E	506_T	0.670	0.95
527_D	533_A	0.667	0.95
417_G	448_R	0.667	0.95
78_E	83_L	0.666	0.95
326_R	442_F	0.666	0.95
527_D	542_F	0.666	0.95
549_T	554_A	0.665	0.95
525_V	536_K	0.664	0.95
65_D	81_T	0.664	0.95
166_G	251_V	0.663	0.95
521_N	524_M	0.662	0.95
488_G	492_N	0.662	0.95
545_G	552_G	0.661	0.94
117_P	123_F	0.661	0.94
341_N	344_V	0.660	0.94
71_L	86_G	0.658	0.94
154_T	254_E	0.656	0.94
495_T	506_T	0.656	0.94
521_N	540_Y	0.653	0.94
544_D	552_G	0.653	0.94
80_V	89_D	0.650	0.94
379_Y	405_L	0.649	0.94
342_T	345_R	0.647	0.94
534_L	539_E	0.647	0.94
535_G	539_E	0.646	0.94
520_L	532_H	0.646	0.94
527_D	538_L	0.646	0.94
99_S	106_D	0.645	0.94
504_E	513_G	0.644	0.94
72_F	81_T	0.644	0.94
503_V	508_A	0.643	0.94
524_M	530_T	0.643	0.94
116_H	122_L	0.641	0.94
69_E	81_T	0.640	0.93
502_A	505_E	0.639	0.93
473_S	477_T	0.633	0.93
73_A	79_K	0.632	0.93
520_L	529_P	0.631	0.93
250_V	271_I	0.630	0.93
199_G	202_A	0.630	0.93
547_E	551_R	0.628	0.93
108_V	111_S	0.626	0.93
71_L	78_E	0.625	0.93
66_R	80_V	0.624	0.93
95_Y	99_S	0.623	0.93
256_H	444_Q	0.622	0.93
97_E	105_V	0.622	0.93
75_Q	84_L	0.622	0.93
183_L	256_H	0.620	0.92
520_L	534_L	0.620	0.92
395_S	398_R	0.618	0.92
546_L	555_V	0.618	0.92
527_D	535_G	0.617	0.92
503_V	515_T	0.617	0.92
335_E	340_E	0.616	0.92
546_L	553_R	0.613	0.92
97_E	100_A	0.613	0.92
75_Q	86_G	0.612	0.92
498_D	514_G	0.612	0.92
66_R	88_L	0.612	0.92
97_E	102_T	0.611	0.92
130_L	133_V	0.611	0.92
327_H	459_K	0.608	0.92
490_M	497_Y	0.607	0.92
529_P	535_G	0.606	0.92
43_D	90_P	0.605	0.91
522_D	534_L	0.604	0.91
145_G	168_H	0.603	0.91
67_L	76_D	0.603	0.91
191_H	204_V	0.602	0.91
82_G	88_L	0.602	0.91
162_G	165_A	0.601	0.91
529_P	538_L	0.601	0.91
78_E	88_L	0.601	0.91
530_T	536_K	0.600	0.91
71_L	80_V	0.600	0.91
162_G	296_L	0.600	0.91
507_L	512_V	0.597	0.91
66_R	75_Q	0.597	0.91
528_I	540_Y	0.595	0.91
59_V	67_L	0.594	0.91
69_E	84_L	0.594	0.91
103_D	106_D	0.594	0.91
67_L	81_T	0.593	0.91
70_L	76_D	0.591	0.90
544_D	548_P	0.591	0.90
424_Q	429_T	0.591	0.90
80_V	90_P	0.588	0.90
71_L	83_L	0.588	0.90
528_I	535_G	0.587	0.90
77_L	90_P	0.586	0.90
498_D	511_T	0.586	0.90
523_R	527_D	0.586	0.90
502_A	506_T	0.585	0.90
321_P	326_R	0.585	0.90
498_D	504_E	0.585	0.90
521_N	527_D	0.585	0.90
548_P	555_V	0.584	0.90
424_Q	428_D	0.583	0.90
84_L	91_D	0.581	0.90
528_I	531_K	0.581	0.90
525_V	541_E	0.579	0.90
66_R	74_E	0.577	0.89
65_D	74_E	0.577	0.89
305_E	309_K	0.577	0.89
82_G	89_D	0.576	0.89
79_K	87_E	0.576	0.89
521_N	529_P	0.576	0.89
74_E	88_L	0.574	0.89
526_G	541_E	0.574	0.89
528_I	541_E	0.573	0.89
522_D	531_K	0.572	0.89
161_V	165_A	0.570	0.89
67_L	84_L	0.566	0.89
87_E	91_D	0.566	0.89
117_P	121_G	0.566	0.89
59_V	76_D	0.565	0.88
532_H	541_E	0.565	0.88
72_F	77_L	0.564	0.88
74_E	84_L	0.564	0.88
314_L	319_E	0.564	0.88
551_R	556_T	0.562	0.88
324_I	450_G	0.561	0.88
58_A	64_Q	0.560	0.88
325_E	457_R	0.559	0.88
521_N	525_V	0.556	0.88
74_E	87_E	0.554	0.87
82_G	96_D	0.554	0.87
510_V	516_A	0.554	0.87
528_I	538_L	0.553	0.87
75_Q	89_D	0.551	0.87
77_L	82_G	0.550	0.87
96_D	100_A	0.550	0.87
546_L	554_A	0.547	0.87
526_G	540_Y	0.547	0.87
384_Y	414_L	0.547	0.87
547_E	552_G	0.547	0.87
520_L	536_K	0.547	0.87
70_L	79_K	0.546	0.87
374_S	378_D	0.546	0.87
525_V	530_T	0.542	0.86
162_G	181_V	0.541	0.86
377_L	407_A	0.541	0.86
444_Q	448_R	0.540	0.86
520_L	524_M	0.536	0.86
191_H	228_V	0.536	0.86
499_E	514_G	0.535	0.86
518_K	523_R	0.533	0.85
208_V	211_S	0.531	0.85
536_K	543_I	0.530	0.85
99_S	102_T	0.529	0.85
518_K	522_D	0.528	0.85
504_E	515_T	0.527	0.85
117_P	125_D	0.524	0.84
154_T	447_G	0.524	0.84
74_E	90_P	0.521	0.84
92_L	102_T	0.521	0.84
96_D	106_D	0.520	0.84
192_E	398_R	0.519	0.84
192_E	196_D	0.519	0.84
320_R	323_P	0.519	0.84
328_V	332_D	0.517	0.84
436_W	445_M	0.517	0.84
360_T	425_V	0.515	0.83
64_Q	73_A	0.515	0.83
337_P	340_E	0.514	0.83
93_T	99_S	0.513	0.83
215_D	219_A	0.513	0.83
509_N	512_V	0.513	0.83
65_D	84_L	0.512	0.83
71_L	81_T	0.512	0.83
500_D	515_T	0.511	0.83
170_L	173_G	0.511	0.83
522_D	528_I	0.510	0.83
517_A	531_K	0.509	0.83
82_G	87_E	0.509	0.83
58_A	70_L	0.509	0.83
489_D	497_Y	0.508	0.83
492_N	497_Y	0.507	0.82
538_L	543_I	0.507	0.82
65_D	72_F	0.505	0.82
212_R	215_D	0.504	0.82
517_A	528_I	0.503	0.82
549_T	555_V	0.502	0.82
70_L	84_L	0.502	0.82
522_D	527_D	0.501	0.82
539_E	542_F	0.500	0.82

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2zj8A	2	0.7787	100	0.405	Contact Map
4qu4A	1	0.8074	100	0.41	Contact Map
4f92B	1	0.8801	100	0.415	Contact Map
2va8A	1	0.7584	100	0.415	Contact Map
2p6rA	1	0.7669	100	0.416	Contact Map
4bgdA	1	0.8463	100	0.423	Contact Map
5agaA	4	0.7889	100	0.425	Contact Map
4a4zA	1	0.7568	100	0.437	Contact Map
4nhoA	1	0.6841	100	0.44	Contact Map
4pxaA	1	0.6858	100	0.442	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0148 seconds.