Q9HN79 - HALSA - GREMLIN Contacts

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Q9HN79 - DNA damage-inducible protein

UniProt:	Q9HN79	Sequences: MFDLSRDEITGGSLPRALLVLTAPLVVQQYVVVVQQIVDVFWLGRVSRNAVSAVGLVAPLIGLLALATSVATIGCRVLVAQHVGADDAAAARSTGFHATVLVGAANLLLAVVVLWLAPDLVGVLLSDEAVIQLGATYLTVTTVGRVFGGMSDTIESGFVGWGDSRMSMLINVVAVLTNVVLDPFLVVGWQLPGFAGYGIFGAALATAIGYVAGFTVAVAGLGVDSTSFTIGRADLGVSRDTVRSLLSVGVPHAGQEAGRQIARLLVVAIVAGVAGSAGLAAYTIGARIATVAFVPAAAVGSAVSSIVGQNVGAGNPDRATRATWLAAGATTAGMAVLGVAQYSSPATIVSVFAPTFSGIELTYTVAYLQILAVGYWAFGLIYPIQGGFNGAGKTTVSMVATLLQYWGVRLPVAALGAYVVVFSVPVHAAFWAITASNVACAVGVTAYFWAQTSGATGLIERAATAAASD	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	469 (424)
Sequences:	18607 (14140)
Seq/√Len:	686.7

ECOLI - YEEO MDTK DINF WZXE
BACSU - YISQ YOEA YPNP NORM EPSK
HALSA - Q9HN79 Q9HMS7 Q9HRF2 Q9HRF7

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
87_D	90_A	4.689	1.00
147_F	211_V	3.943	1.00
136_T	200_F	3.334	1.00
55_G	283_T	3.200	1.00
349_V	364_T	3.137	1.00
80_A	308_G	3.099	1.00
118_P	135_A	3.056	1.00
344_S	347_T	3.027	1.00
315_N	318_R	2.930	1.00
243_R	247_S	2.892	1.00
116_L	119_D	2.771	1.00
163_D	166_M	2.761	1.00
118_P	122_G	2.712	1.00
140_V	200_F	2.506	1.00
75_C	98_A	2.482	1.00
135_A	139_T	2.457	1.00
177_T	212_A	2.442	1.00
239_R	243_R	2.440	1.00
184_F	189_W	2.429	1.00
42_W	186_V	2.419	1.00
82_H	90_A	2.403	1.00
49_N	129_A	2.325	1.00
42_W	183_P	2.288	1.00
127_D	276_S	2.236	1.00
174_A	213_G	2.232	1.00
53_A	133_L	2.220	1.00
16_R	20_V	2.214	1.00
303_V	326_A	2.199	1.00
133_L	136_T	2.135	1.00
93_S	238_S	2.108	1.00
170_I	216_V	2.102	1.00
324_W	328_G	2.065	1.00
150_M	214_F	2.062	1.00
393_K	447_Y	2.037	1.00
366_A	427_H	1.996	1.00
345_P	369_Q	1.983	1.00
140_V	203_A	1.964	1.00
356_F	360_E	1.962	1.00
281_A	363_Y	1.951	1.00
132_Q	136_T	1.947	1.00
39_D	206_T	1.937	1.00
144_G	207_A	1.936	1.00
425_P	428_A	1.932	1.00
310_N	318_R	1.918	1.00
43_L	202_A	1.915	1.00
346_A	365_V	1.909	1.00
82_H	87_D	1.903	1.00
200_F	204_L	1.898	1.00
47_S	50_A	1.897	1.00
26_V	298_A	1.882	1.00
186_V	202_A	1.865	1.00
357_S	360_E	1.864	1.00
102_V	153_T	1.848	1.00
197_Y	204_L	1.823	1.00
42_W	182_D	1.797	1.00
165_R	169_L	1.778	1.00
184_F	188_G	1.748	1.00
82_H	85_A	1.748	1.00
48_R	355_T	1.741	1.00
23_A	27_V	1.729	1.00
122_G	131_I	1.721	1.00
117_A	135_A	1.713	1.00
345_P	365_V	1.712	1.00
311_V	391_A	1.689	1.00
277_A	357_S	1.670	1.00
189_W	196_G	1.657	1.00
140_V	204_L	1.655	1.00
170_I	217_A	1.651	1.00
215_T	219_A	1.645	1.00
377_A	438_V	1.637	1.00
143_V	146_V	1.635	1.00
176_L	180_V	1.632	1.00
342_Y	369_Q	1.631	1.00
346_A	350_S	1.616	1.00
306_I	322_A	1.614	1.00
321_R	324_W	1.606	1.00
22_T	302_A	1.600	1.00
323_T	384_I	1.598	1.00
147_F	214_F	1.595	1.00
321_R	325_L	1.591	1.00
183_P	189_W	1.580	1.00
320_T	324_W	1.577	1.00
119_D	122_G	1.576	1.00
188_G	196_G	1.575	1.00
78_L	94_T	1.572	1.00
129_A	276_S	1.571	1.00
310_N	315_N	1.545	1.00
113_V	142_T	1.541	1.00
330_T	379_G	1.536	1.00
311_V	319_A	1.519	1.00
238_S	241_T	1.506	1.00
129_A	132_Q	1.501	1.00
38_V	179_V	1.497	1.00
268_A	272_G	1.494	1.00
181_L	205_A	1.488	1.00
182_D	202_A	1.487	1.00
117_A	139_T	1.484	1.00
131_I	135_A	1.480	1.00
338_G	342_Y	1.473	1.00
90_A	93_S	1.472	1.00
128_E	132_Q	1.471	1.00
323_T	387_G	1.460	1.00
393_K	396_V	1.459	1.00
183_P	187_V	1.450	1.00
347_T	350_S	1.449	1.00
140_V	207_A	1.447	1.00
154_I	217_A	1.436	1.00
424_V	428_A	1.431	1.00
365_V	369_Q	1.428	1.00
15_P	325_L	1.428	1.00
219_A	223_V	1.426	1.00
88_A	92_R	1.416	1.00
110_A	146_V	1.411	1.00
317_D	321_R	1.410	1.00
328_G	332_A	1.407	1.00
185_L	189_W	1.392	1.00
122_G	128_E	1.386	1.00
180_V	183_P	1.374	1.00
370_I	431_W	1.372	1.00
82_H	94_T	1.372	1.00
118_P	132_Q	1.372	1.00
14_L	306_I	1.371	1.00
177_T	181_L	1.368	1.00
57_V	138_L	1.364	1.00
169_L	173_V	1.358	1.00
446_A	450_A	1.356	1.00
81_Q	85_A	1.347	1.00
43_L	54_V	1.346	1.00
121_V	131_I	1.344	1.00
89_A	93_S	1.340	1.00
39_D	178_N	1.338	1.00
350_S	359_I	1.330	1.00
180_V	184_F	1.326	1.00
415_L	419_V	1.321	1.00
200_F	203_A	1.318	1.00
52_S	280_A	1.316	1.00
27_V	168_M	1.305	1.00
347_T	351_V	1.299	1.00
83_V	309_Q	1.295	1.00
342_Y	372_A	1.283	1.00
316_P	320_T	1.272	1.00
50_A	133_L	1.266	1.00
31_V	172_V	1.265	1.00
84_G	312_G	1.259	1.00
330_T	383_P	1.252	1.00
119_D	123_V	1.250	1.00
185_L	197_Y	1.248	1.00
90_A	241_T	1.248	1.00
118_P	131_I	1.243	1.00
114_L	139_T	1.232	1.00
446_A	449_W	1.224	1.00
81_Q	308_G	1.219	1.00
408_V	439_A	1.207	1.00
339_V	343_S	1.201	1.00
403_L	407_G	1.198	1.00
48_R	277_A	1.198	1.00
360_E	366_A	1.197	1.00
240_D	243_R	1.196	1.00
395_T	399_V	1.195	1.00
170_I	220_G	1.195	1.00
181_L	208_I	1.194	1.00
40_V	287_R	1.192	1.00
83_V	91_A	1.189	1.00
40_V	51_V	1.186	1.00
414_A	418_Y	1.183	1.00
49_N	276_S	1.170	1.00
110_A	114_L	1.166	1.00
15_P	329_A	1.162	1.00
288_I	348_I	1.159	1.00
121_V	134_G	1.154	1.00
97_H	242_V	1.152	1.00
182_D	205_A	1.142	1.00
185_L	208_I	1.141	1.00
79_V	160_G	1.136	1.00
53_A	130_V	1.125	1.00
237_V	242_V	1.122	1.00
97_H	237_V	1.121	1.00
81_Q	392_G	1.118	1.00
45_R	187_V	1.117	1.00
363_Y	366_A	1.110	1.00
173_V	216_V	1.107	1.00
428_A	432_A	1.107	1.00
54_V	199_I	1.104	1.00
250_V	254_G	1.104	1.00
411_P	415_L	1.102	1.00
349_V	359_I	1.101	1.00
307_V	319_A	1.095	1.00
183_P	186_V	1.095	1.00
278_G	426_V	1.094	1.00
424_V	431_W	1.094	1.00
178_N	206_T	1.093	1.00
46_V	50_A	1.090	1.00
13_S	16_R	1.086	1.00
95_G	157_G	1.086	1.00
400_A	444_V	1.072	1.00
177_T	209_G	1.071	1.00
300_G	386_G	1.067	1.00
285_G	367_Y	1.066	1.00
39_D	182_D	1.066	1.00
163_D	167_S	1.066	1.00
183_P	188_G	1.063	1.00
101_L	242_V	1.054	1.00
359_I	364_T	1.052	1.00
416_G	424_V	1.052	1.00
102_V	149_G	1.049	1.00
185_L	188_G	1.042	1.00
419_V	424_V	1.038	1.00
162_G	309_Q	1.037	1.00
103_G	150_M	1.036	1.00
92_R	234_D	1.036	1.00
231_G	234_D	1.034	1.00
115_W	119_D	1.025	1.00
277_A	363_Y	1.022	1.00
399_V	403_L	1.020	1.00
49_N	133_L	1.020	1.00
18_L	326_A	1.020	1.00
332_A	336_V	1.018	1.00
166_M	220_G	1.013	1.00
325_L	329_A	1.009	1.00
188_G	197_Y	1.007	1.00
98_A	245_L	1.000	1.00
381_I	437_N	0.993	1.00
93_S	241_T	0.990	1.00
84_G	313_A	0.988	1.00
310_N	322_A	0.979	1.00
19_L	23_A	0.979	1.00
110_A	143_V	0.971	1.00
139_T	143_V	0.969	1.00
204_L	207_A	0.966	1.00
94_T	241_T	0.966	1.00
407_G	411_P	0.964	1.00
189_W	197_Y	0.962	1.00
442_V	446_A	0.953	1.00
367_Y	426_V	0.953	1.00
370_I	427_H	0.947	1.00
269_I	413_A	0.941	1.00
154_I	214_F	0.935	1.00
83_V	161_W	0.929	1.00
17_A	20_V	0.926	1.00
335_A	339_V	0.925	1.00
353_A	358_G	0.925	1.00
244_S	247_S	0.925	1.00
447_Y	450_A	0.924	1.00
117_A	138_L	0.920	1.00
207_A	211_V	0.919	1.00
172_V	176_L	0.915	1.00
360_E	365_V	0.915	1.00
396_V	447_Y	0.913	1.00
288_I	341_Q	0.913	1.00
342_Y	346_A	0.909	1.00
56_L	126_S	0.909	1.00
115_W	139_T	0.908	1.00
75_C	79_V	0.907	1.00
271_A	279_L	0.903	1.00
307_V	390_G	0.903	1.00
298_A	302_A	0.902	1.00
182_D	206_T	0.900	1.00
45_R	354_P	0.900	1.00
427_H	431_W	0.900	1.00
96_F	235_L	0.899	1.00
136_T	139_T	0.899	1.00
212_A	216_V	0.899	1.00
83_V	88_A	0.899	1.00
346_A	360_E	0.895	1.00
41_F	44_G	0.894	1.00
68_T	149_G	0.890	1.00
133_L	199_I	0.889	1.00
81_Q	311_V	0.886	1.00
181_L	185_L	0.886	1.00
143_V	207_A	0.885	1.00
211_V	215_T	0.885	1.00
436_S	440_C	0.885	1.00
377_A	441_A	0.884	1.00
319_A	323_T	0.884	1.00
408_V	411_P	0.883	1.00
336_V	340_A	0.879	1.00
25_L	301_S	0.878	1.00
412_V	435_A	0.877	1.00
432_A	436_S	0.870	1.00
163_D	220_G	0.867	1.00
114_L	118_P	0.866	1.00
327_A	380_L	0.865	1.00
281_A	364_T	0.864	1.00
158_F	221_L	0.864	1.00
36_Q	58_A	0.863	1.00
247_S	395_T	0.862	1.00
284_I	352_F	0.855	1.00
319_A	391_A	0.855	1.00
61_I	141_T	0.855	1.00
336_V	339_V	0.854	1.00
345_P	368_L	0.853	1.00
38_V	178_N	0.850	1.00
21_L	164_S	0.849	1.00
310_N	313_A	0.847	1.00
258_G	402_L	0.845	1.00
254_G	398_M	0.844	1.00
307_V	387_G	0.843	1.00
81_Q	244_S	0.840	1.00
278_G	363_Y	0.840	1.00
204_L	208_I	0.839	1.00
104_A	108_L	0.838	1.00
178_N	182_D	0.835	1.00
284_I	364_T	0.829	1.00
296_A	334_M	0.828	1.00
216_V	219_A	0.826	1.00
349_V	365_V	0.826	1.00
343_S	347_T	0.824	1.00
321_R	328_G	0.824	1.00
52_S	130_V	0.823	1.00
108_L	112_V	0.818	1.00
169_L	172_V	0.817	1.00
282_Y	430_F	0.816	1.00
38_V	175_V	0.816	1.00
257_A	261_I	0.815	1.00
111_V	115_W	0.814	1.00
42_W	187_V	0.814	1.00
380_L	441_A	0.814	1.00
132_Q	135_A	0.812	1.00
226_T	229_T	0.808	1.00
80_A	160_G	0.807	1.00
49_N	130_V	0.806	1.00
78_L	248_V	0.806	1.00
154_I	221_L	0.805	1.00
168_M	172_V	0.804	1.00
128_E	131_I	0.803	1.00
98_A	153_T	0.802	1.00
151_S	213_G	0.802	1.00
404_Q	440_C	0.802	1.00
388_F	447_Y	0.801	1.00
359_I	365_V	0.799	1.00
15_P	328_G	0.798	1.00
31_V	175_V	0.798	1.00
412_V	416_G	0.789	1.00
310_N	319_A	0.789	1.00
325_L	328_G	0.786	1.00
331_T	335_A	0.785	1.00
269_I	417_A	0.785	1.00
112_V	116_L	0.784	1.00
117_A	142_T	0.784	1.00
357_S	363_Y	0.784	1.00
218_V	222_G	0.783	1.00
281_A	358_G	0.783	1.00
100_V	104_A	0.780	1.00
268_A	271_A	0.780	1.00
140_V	143_V	0.778	1.00
18_L	325_L	0.777	1.00
356_F	359_I	0.777	1.00
287_R	352_F	0.775	1.00
384_I	444_V	0.774	1.00
318_R	321_R	0.774	1.00
413_A	417_A	0.771	1.00
78_L	82_H	0.770	1.00
158_F	166_M	0.769	1.00
342_Y	345_P	0.769	1.00
299_V	326_A	0.767	1.00
428_A	431_W	0.766	1.00
46_V	196_G	0.765	1.00
370_I	434_T	0.764	1.00
130_V	279_L	0.764	1.00
173_V	177_T	0.762	1.00
163_D	224_D	0.762	1.00
241_T	244_S	0.759	1.00
89_A	92_R	0.758	1.00
332_A	335_A	0.758	1.00
89_A	234_D	0.757	1.00
274_A	278_G	0.756	1.00
92_R	231_G	0.754	1.00
17_A	306_I	0.754	1.00
93_S	96_F	0.754	1.00
48_R	358_G	0.753	1.00
159_V	167_S	0.751	1.00
328_G	331_T	0.751	1.00
158_F	217_A	0.750	1.00
100_V	237_V	0.750	1.00
44_G	51_V	0.749	1.00
281_A	367_Y	0.749	1.00
121_V	138_L	0.748	1.00
219_A	222_G	0.748	1.00
79_V	157_G	0.739	1.00
85_A	312_G	0.738	1.00
182_D	186_V	0.738	1.00
17_A	309_Q	0.737	1.00
136_T	199_I	0.735	1.00
323_T	448_F	0.733	1.00
28_Q	171_N	0.733	1.00
265_L	410_L	0.729	1.00
100_V	235_L	0.728	1.00
317_D	324_W	0.728	1.00
438_V	442_V	0.727	1.00
53_A	199_I	0.727	1.00
274_A	417_A	0.723	1.00
43_L	186_V	0.721	1.00
326_A	383_P	0.718	1.00
331_T	379_G	0.716	1.00
355_T	359_I	0.716	1.00
178_N	209_G	0.715	1.00
67_A	253_A	0.712	1.00
373_V	376_W	0.712	1.00
77_V	81_Q	0.712	1.00
244_S	392_G	0.711	1.00
166_M	216_V	0.709	1.00
35_Q	206_T	0.709	1.00
138_L	142_T	0.709	1.00
196_G	200_F	0.708	1.00
307_V	323_T	0.707	1.00
353_A	356_F	0.706	1.00
15_P	19_L	0.706	1.00
409_R	413_A	0.705	1.00
37_I	291_V	0.705	1.00
79_V	91_A	0.704	1.00
96_F	234_D	0.703	1.00
335_A	376_W	0.702	1.00
386_G	390_G	0.700	1.00
417_A	428_A	0.700	1.00
431_W	434_T	0.700	1.00
173_V	212_A	0.698	1.00
344_S	348_I	0.696	1.00
416_G	428_A	0.695	1.00
108_L	111_V	0.695	1.00
90_A	94_T	0.694	1.00
396_V	400_A	0.692	1.00
142_T	145_R	0.692	1.00
129_A	133_L	0.691	1.00
118_P	139_T	0.691	1.00
41_F	351_V	0.688	1.00
31_V	34_V	0.688	1.00
289_A	375_Y	0.686	1.00
317_D	320_T	0.686	1.00
34_V	38_V	0.683	1.00
137_Y	182_D	0.682	1.00
249_G	253_A	0.682	1.00
38_V	42_W	0.682	1.00
275_G	278_G	0.681	1.00
18_L	302_A	0.681	1.00
343_S	346_A	0.676	1.00
369_Q	373_V	0.671	1.00
334_M	379_G	0.671	1.00
251_P	398_M	0.670	1.00
316_P	319_A	0.668	1.00
227_S	230_I	0.666	1.00
426_V	430_F	0.661	1.00
53_A	134_G	0.660	1.00
246_L	250_V	0.658	1.00
410_L	414_A	0.656	1.00
51_V	353_A	0.655	1.00
144_G	147_F	0.653	1.00
144_G	210_Y	0.652	1.00
43_L	199_I	0.651	1.00
270_V	282_Y	0.650	1.00
116_L	120_L	0.650	1.00
295_P	333_G	0.649	1.00
360_E	363_Y	0.649	1.00
408_V	412_V	0.648	1.00
203_A	207_A	0.648	1.00
281_A	430_F	0.647	1.00
154_I	218_V	0.645	1.00
299_V	333_G	0.645	1.00
41_F	45_R	0.643	1.00
311_V	316_P	0.642	1.00
303_V	307_V	0.641	1.00
139_T	200_F	0.641	1.00
293_F	378_F	0.639	1.00
143_V	147_F	0.638	1.00
114_L	143_V	0.638	1.00
345_P	349_V	0.637	1.00
22_T	298_A	0.635	1.00
333_G	337_L	0.635	1.00
277_A	280_A	0.632	1.00
208_I	211_V	0.631	1.00
30_Y	34_V	0.631	1.00
111_V	114_L	0.628	1.00
130_V	133_L	0.628	1.00
85_A	314_G	0.627	1.00
103_G	107_L	0.625	1.00
151_S	214_F	0.625	1.00
248_V	394_T	0.624	1.00
185_L	202_A	0.621	1.00
197_Y	200_F	0.619	1.00
35_Q	174_A	0.618	1.00
292_A	337_L	0.618	1.00
77_V	308_G	0.614	1.00
131_I	134_G	0.612	1.00
431_W	435_A	0.610	1.00
299_V	330_T	0.609	1.00
266_V	413_A	0.608	1.00
209_G	212_A	0.608	1.00
13_S	17_A	0.608	1.00
240_D	244_S	0.606	1.00
142_T	146_V	0.604	1.00
17_A	318_R	0.603	1.00
387_G	391_A	0.603	1.00
197_Y	201_G	0.602	1.00
267_V	271_A	0.600	1.00
70_V	253_A	0.599	1.00
309_Q	313_A	0.598	1.00
304_S	389_N	0.598	1.00
93_S	97_H	0.597	1.00
77_V	248_V	0.597	1.00
222_G	229_T	0.597	1.00
270_V	426_V	0.596	1.00
52_S	55_G	0.596	1.00
198_G	201_G	0.596	1.00
177_T	208_I	0.595	1.00
35_Q	210_Y	0.592	1.00
76_R	156_S	0.592	1.00
187_V	197_Y	0.592	1.00
331_T	376_W	0.592	1.00
58_A	62_G	0.591	1.00
106_N	142_T	0.590	1.00
340_A	344_S	0.590	1.00
34_V	175_V	0.589	1.00
74_G	249_G	0.589	1.00
14_L	321_R	0.589	1.00
155_E	159_V	0.588	1.00
278_G	281_A	0.586	1.00
106_N	146_V	0.585	1.00
87_D	93_S	0.585	1.00
411_P	414_A	0.585	1.00
124_L	264_L	0.584	1.00
223_V	226_T	0.583	1.00
51_V	284_I	0.582	1.00
266_V	429_A	0.582	1.00
269_I	272_G	0.582	1.00
146_V	211_V	0.581	1.00
400_A	443_G	0.581	1.00
409_R	436_S	0.578	1.00
225_S	228_F	0.576	1.00
172_V	175_V	0.576	1.00
107_L	111_V	0.575	1.00
329_A	332_A	0.575	1.00
49_N	52_S	0.573	1.00
214_F	218_V	0.573	1.00
331_T	380_L	0.572	1.00
353_A	359_I	0.570	1.00
50_A	53_A	0.569	1.00
443_G	446_A	0.568	1.00
232_R	235_L	0.567	1.00
250_V	253_A	0.567	1.00
173_V	176_L	0.566	1.00
404_Q	443_G	0.565	1.00
394_T	398_M	0.565	1.00
71_A	253_A	0.563	1.00
178_N	205_A	0.563	1.00
269_I	414_A	0.563	1.00
46_V	199_I	0.562	1.00
43_L	50_A	0.561	1.00
289_A	371_L	0.561	1.00
338_G	376_W	0.560	1.00
177_T	180_V	0.560	1.00
147_F	207_A	0.559	1.00
412_V	415_L	0.558	1.00
366_A	369_Q	0.557	1.00
327_A	331_T	0.556	1.00
107_L	110_A	0.556	1.00
136_T	140_V	0.555	1.00
216_V	220_G	0.555	1.00
151_S	155_E	0.555	1.00
106_N	110_A	0.552	1.00
401_T	404_Q	0.552	1.00
86_D	313_A	0.551	1.00
416_G	419_V	0.551	1.00
272_G	418_Y	0.550	1.00
18_L	22_T	0.549	1.00
323_T	327_A	0.549	1.00
156_S	159_V	0.548	1.00
372_A	376_W	0.548	1.00
110_A	115_W	0.548	1.00
415_L	418_Y	0.547	1.00
70_V	304_S	0.546	1.00
358_G	364_T	0.546	1.00
304_S	386_G	0.546	1.00
201_G	205_A	0.546	1.00
102_V	106_N	0.545	1.00
96_F	100_V	0.544	1.00
50_A	198_G	0.543	1.00
228_F	231_G	0.543	1.00
413_A	429_A	0.543	1.00
185_L	204_L	0.542	1.00
179_V	183_P	0.539	1.00
388_F	393_K	0.539	1.00
79_V	94_T	0.539	1.00
327_A	384_I	0.538	1.00
41_F	352_F	0.538	1.00
354_P	359_I	0.536	1.00
137_Y	202_A	0.535	1.00
242_V	246_L	0.535	1.00
384_I	441_A	0.535	1.00
205_A	209_G	0.534	1.00
97_H	241_T	0.533	1.00
73_I	301_S	0.531	1.00
56_L	134_G	0.531	1.00
130_V	276_S	0.530	1.00
324_W	327_A	0.530	1.00
43_L	46_V	0.529	1.00
232_R	236_G	0.528	1.00
14_L	325_L	0.527	1.00
439_A	443_G	0.527	1.00
130_V	134_G	0.525	1.00
36_Q	141_T	0.525	1.00
355_T	360_E	0.525	1.00
303_V	383_P	0.524	1.00
159_V	164_S	0.524	1.00
38_V	41_F	0.522	1.00
114_L	142_T	0.522	1.00
121_V	135_A	0.521	1.00
290_T	293_F	0.521	1.00
411_P	418_Y	0.521	1.00
115_W	118_P	0.521	1.00
14_L	322_A	0.520	1.00
412_V	432_A	0.519	0.99
409_R	412_V	0.519	0.99
121_V	126_S	0.519	0.99
425_P	432_A	0.519	0.99
64_L	145_R	0.518	0.99
346_A	359_I	0.517	0.99
42_W	205_A	0.517	0.99
306_I	310_N	0.516	0.99
52_S	279_L	0.515	0.99
381_I	440_C	0.515	0.99
276_S	280_A	0.514	0.99
341_Q	348_I	0.512	0.99
54_V	137_Y	0.512	0.99
79_V	95_G	0.510	0.99
14_L	318_R	0.510	0.99
71_A	105_A	0.510	0.99
91_A	95_G	0.509	0.99
95_G	154_I	0.508	0.99
222_G	225_S	0.506	0.99
170_I	213_G	0.505	0.99
113_V	117_A	0.505	0.99
45_R	353_A	0.504	0.99
430_F	433_I	0.504	0.99
85_A	90_A	0.504	0.99
345_P	372_A	0.503	0.99
262_A	405_Y	0.501	0.99
46_V	186_V	0.500	0.99

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4lz6A	1	0.9488	100	0.278	Contact Map
3mktA	1	0.9701	100	0.281	Contact Map
4humA	1	0.9723	100	0.281	Contact Map
3w4tA	1	0.9382	100	0.327	Contact Map
4ikvA	1	0.8678	86.2	0.936	Contact Map
4w6vA	1	0.8422	82.9	0.938	Contact Map
1pw4A	1	0.8593	81.5	0.939	Contact Map
3wdoA	1	0.8529	81.1	0.939	Contact Map
4tphA	2	0.806	78.1	0.941	Contact Map
4xnjA	1	0.8358	67.4	0.946	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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