GREMLIN Database
THSA - Thermosome subunit alpha
UniProt: Q9HN70 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 562 (500)
Sequences: 5487 (2345)
Seq/√Len: 104.9

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
135_K138_E4.9041.00
144_A495_L4.7041.00
140_L495_L4.4971.00
485_D488_S4.2401.00
139_L142_D4.1461.00
152_T181_R4.1061.00
477_D480_N3.9461.00
477_D484_I3.7711.00
156_E177_D3.5251.00
287_V329_P3.5011.00
426_V434_V3.4551.00
177_D181_R3.4491.00
484_I489_E3.3181.00
345_G362_D3.3051.00
131_Q430_E3.2281.00
473_E485_D3.1881.00
111_E439_D3.1861.00
445_P463_L3.0651.00
412_E498_K2.9851.00
476_L481_G2.9711.00
64_N69_I2.9571.00
152_T184_Q2.9441.00
454_H476_L2.8891.00
459_S483_V2.8121.00
133_A502_I2.8031.00
133_A506_T2.7881.00
129_Y506_T2.7381.00
108_L129_Y2.7301.00
419_L434_V2.6701.00
278_D282_D2.5931.00
442_E464_R2.4911.00
462_D465_S2.3891.00
210_S373_L2.3831.00
130_R510_T2.3731.00
140_L411_P2.3701.00
138_E142_D2.3201.00
466_Q474_A2.3111.00
420_R438_A2.3051.00
294_I309_A2.2801.00
139_L418_Q2.2251.00
477_D489_E2.1931.00
108_L437_F2.1881.00
34_K38_E2.1811.00
135_K422_F2.1741.00
173_G177_D2.1381.00
408_G486_M2.1271.00
134_E138_E2.1101.00
81_N84_V2.1091.00
271_E275_E2.0681.00
141_D499_T2.0611.00
34_K106_G2.0531.00
527_G530_G2.0231.00
41_R106_G2.0121.00
300_H303_A2.0091.00
160_A173_G2.0061.00
30_I34_K1.9901.00
31_T35_A1.9801.00
437_F506_T1.9801.00
454_H481_G1.9791.00
136_A415_L1.9551.00
339_A343_A1.9521.00
231_V234_A1.9341.00
330_V333_V1.9171.00
109_L512_I1.9131.00
466_Q471_D1.8851.00
124_T430_E1.8631.00
145_I487_E1.8551.00
422_F434_V1.8511.00
418_Q421_D1.8491.00
449_A454_H1.8481.00
152_T177_D1.8471.00
230_A346_S1.8391.00
179_V388_I1.8371.00
404_V492_V1.8281.00
135_K418_Q1.8211.00
154_T157_K1.8111.00
61_V386_R1.7911.00
139_L143_A1.7801.00
484_I491_I1.7761.00
100_T501_A1.7661.00
312_R320_R1.7621.00
129_Y437_F1.7581.00
37_A106_G1.7521.00
386_R389_E1.7451.00
23_E27_S1.7411.00
344_A360_V1.7361.00
422_F425_S1.7341.00
279_A282_D1.7181.00
413_T445_P1.7171.00
229_Y287_V1.7021.00
19_R517_D1.6821.00
137_K141_D1.6781.00
183_V399_L1.6671.00
28_M31_T1.6611.00
462_D482_D1.6571.00
115_L432_L1.6511.00
107_E110_S1.6321.00
126_A130_R1.6311.00
91_E386_R1.6211.00
238_L311_R1.6201.00
64_N386_R1.6031.00
136_A441_L1.6001.00
416_A464_R1.5901.00
414_E472_T1.5791.00
442_E446_R1.5771.00
59_E379_H1.5701.00
462_D466_Q1.5681.00
281_K307_I1.5401.00
233_D260_D1.5361.00
449_A456_P1.5311.00
138_E141_D1.5241.00
419_L438_A1.5211.00
205_G209_N1.5171.00
112_A129_Y1.4911.00
132_A437_F1.4871.00
321_L360_V1.4741.00
115_L120_I1.4581.00
411_P415_L1.4541.00
353_G356_E1.4481.00
443_V447_T1.4441.00
34_K110_S1.4281.00
111_E114_T1.4251.00
38_E106_G1.4241.00
441_L502_I1.4051.00
135_K434_V1.4021.00
237_A336_I1.4011.00
413_T464_R1.4011.00
137_K503_E1.3951.00
135_K139_L1.3911.00
274_K278_D1.3911.00
486_M491_I1.3901.00
136_A419_L1.3771.00
231_V263_Q1.3771.00
238_L327_A1.3751.00
417_M421_D1.3731.00
265_F305_E1.3520.99
236_I324_A1.3470.99
471_D485_D1.3450.99
410_A414_E1.3440.99
178_L210_S1.3390.99
324_A336_I1.3380.99
127_Q430_E1.3310.99
400_E496_R1.3280.99
91_E393_G1.3250.99
289_F360_V1.3150.99
64_N164_T1.2990.99
474_A483_V1.2950.99
339_A342_G1.2800.99
231_V287_V1.2780.99
148_S154_T1.2760.99
431_Q435_E1.2730.99
145_I154_T1.2730.99
343_A364_E1.2650.99
33_G512_I1.2620.99
339_A348_A1.2290.99
131_Q135_K1.2220.99
235_N323_R1.2200.99
143_A146_D1.2160.99
110_S443_V1.2040.99
107_E443_V1.2010.99
30_I109_L1.1980.99
445_P449_A1.1970.99
422_F426_V1.1950.99
132_A434_V1.1940.99
435_E439_D1.1930.99
254_V257_T1.1850.99
203_T373_L1.1790.99
461_V465_S1.1770.99
401_D496_R1.1580.98
153_E156_E1.1540.98
406_P487_E1.1530.98
158_I404_V1.1500.98
120_I432_L1.1500.98
406_P410_A1.1490.98
471_D474_A1.1480.98
244_E269_E1.1420.98
28_M77_H1.1360.98
63_T383_E1.1330.98
414_E473_E1.1320.98
310_V358_I1.1310.98
91_E389_E1.1230.98
201_K382_D1.1200.98
140_L499_T1.1190.98
238_L313_A1.1140.98
373_L381_V1.1120.98
33_G83_I1.1110.98
18_Q520_A1.1010.98
427_G434_V1.1000.98
205_G373_L1.0900.98
344_A366_A1.0900.98
386_R393_G1.0880.98
258_D261_Q1.0830.98
86_V101_S1.0790.97
428_G431_Q1.0770.97
238_L305_E1.0750.97
499_T503_E1.0680.97
435_E438_A1.0650.97
351_D354_G1.0500.97
65_D68_T1.0480.97
293_G296_D1.0430.97
459_S476_L1.0430.97
69_I386_R1.0410.97
238_L322_S1.0400.97
131_Q426_V1.0360.97
235_N284_G1.0290.97
288_V302_L1.0290.97
142_D418_Q1.0270.97
56_S78_P1.0260.97
337_E340_D1.0240.97
416_A442_E1.0230.97
477_D491_I1.0200.96
143_A472_T1.0170.96
461_V464_R1.0130.96
426_V430_E1.0110.96
521_A524_L1.0100.96
454_H459_S1.0070.96
66_G99_T1.0060.96
494_P497_V1.0060.96
55_D72_E1.0060.96
383_E386_R1.0040.96
337_E341_L1.0030.96
392_L396_R1.0030.96
44_L103_V1.0010.96
149_A154_T0.9940.96
44_L100_T0.9940.96
76_E525_A0.9930.96
234_A287_V0.9930.96
405_M495_L0.9920.96
260_D323_R0.9880.96
243_L280_L0.9850.96
87_A102_V0.9840.96
76_E522_G0.9830.96
427_G430_E0.9810.96
415_L441_L0.9800.96
448_L478_A0.9800.96
230_A326_G0.9780.95
234_A324_A0.9780.95
65_D390_D0.9760.95
388_I392_L0.9720.95
99_T390_D0.9680.95
350_K356_E0.9660.95
523_D527_G0.9660.95
423_A431_Q0.9620.95
38_E41_R0.9590.95
98_T390_D0.9580.95
149_A153_E0.9550.95
232_E326_G0.9540.95
155_L184_Q0.9530.95
156_E159_A0.9500.95
289_F313_A0.9500.95
20_T28_M0.9440.95
140_L415_L0.9420.94
185_S214_E0.9390.94
30_I113_E0.9370.94
347_V363_V0.9360.94
371_L388_I0.9330.94
27_S31_T0.9330.94
143_A415_L0.9310.94
41_R447_T0.9310.94
267_D271_E0.9280.94
156_E160_A0.9280.94
487_E492_V0.9270.94
111_E440_A0.9270.94
33_G109_L0.9250.94
137_K499_T0.9180.94
261_Q264_N0.9180.94
156_E173_G0.9110.93
343_A348_A0.9100.93
417_M420_R0.9090.93
37_A41_R0.9090.93
139_L415_L0.9080.93
230_A348_A0.9070.93
279_A285_A0.9050.93
264_N267_D0.9040.93
181_R214_E0.9030.93
425_S434_V0.9010.93
181_R185_S0.9010.93
20_T24_D0.9000.93
308_L347_V0.8990.93
437_F441_L0.8970.93
178_L371_L0.8960.93
463_L483_V0.8950.93
358_I361_E0.8950.93
238_L265_F0.8940.93
157_K490_G0.8930.93
340_D344_A0.8930.93
383_E387_A0.8920.93
128_G433_A0.8890.93
495_L499_T0.8880.93
234_A286_N0.8880.93
302_L309_A0.8860.92
398_T402_G0.8860.92
159_A395_V0.8850.92
411_P495_L0.8850.92
53_L519_I0.8840.92
373_L384_V0.8840.92
279_A334_N0.8820.92
450_E456_P0.8810.92
183_V197_V0.8800.92
349_Q356_E0.8800.92
212_L289_F0.8670.92
482_D489_E0.8650.92
454_H478_A0.8630.91
155_L159_A0.8610.91
165_G172_K0.8610.91
512_I518_V0.8590.91
18_Q522_G0.8570.91
41_R450_E0.8560.91
108_L512_I0.8560.91
414_E474_A0.8550.91
42_T51_K0.8520.91
416_A441_L0.8520.91
413_T442_E0.8510.91
280_L285_A0.8470.91
158_I394_V0.8470.91
201_K385_E0.8460.91
152_T156_E0.8450.91
63_T69_I0.8450.91
63_T386_R0.8450.91
124_T479_Y0.8450.91
473_E487_E0.8420.90
389_E393_G0.8410.90
141_D144_A0.8400.90
414_E463_L0.8390.90
423_A438_A0.8390.90
183_V392_L0.8370.90
415_L418_Q0.8360.90
207_I384_V0.8350.90
281_K305_E0.8340.90
18_Q521_A0.8340.90
141_D495_L0.8330.90
406_P473_E0.8330.90
124_T427_G0.8330.90
413_T416_A0.8320.90
139_L414_E0.8300.90
500_Q503_E0.8290.90
128_G132_A0.8280.90
130_R134_E0.8280.90
30_I110_S0.8270.90
339_A350_K0.8250.90
425_S431_Q0.8240.89
133_A437_F0.8240.89
423_A435_E0.8210.89
429_R432_L0.8190.89
71_K88_E0.8190.89
120_I429_R0.8150.89
443_V446_R0.8140.89
143_A411_P0.8130.89
227_M293_G0.8100.89
135_K142_D0.8090.89
476_L482_D0.8090.89
526_G529_V0.8030.88
83_I86_V0.8030.88
449_A476_L0.8010.88
44_L444_I0.7980.88
324_A363_V0.7960.88
100_T444_I0.7960.88
343_A350_K0.7950.88
263_Q267_D0.7940.88
133_A137_K0.7920.88
236_I344_A0.7910.87
401_D499_T0.7880.87
522_G526_G0.7870.87
414_E417_M0.7870.87
241_D316_D0.7860.87
158_I398_T0.7860.87
153_E157_K0.7850.87
484_I488_S0.7800.87
143_A406_P0.7800.87
38_E42_T0.7760.86
239_V243_L0.7750.86
182_A204_G0.7740.86
263_Q329_P0.7710.86
419_L422_F0.7710.86
214_E361_E0.7710.86
110_S503_E0.7700.86
445_P460_L0.7700.86
314_K320_R0.7700.86
50_D64_N0.7690.86
231_V286_N0.7670.86
224_S227_M0.7670.86
149_A188_D0.7660.86
136_A418_Q0.7650.86
420_R435_E0.7650.86
55_D59_E0.7630.86
45_G48_G0.7620.85
277_V305_E0.7590.85
81_N396_R0.7580.85
32_A79_A0.7580.85
240_D317_D0.7580.85
350_K361_E0.7560.85
217_I268_Q0.7550.85
297_M355_D0.7550.85
345_G348_A0.7540.85
36_V83_I0.7520.85
339_A354_G0.7520.85
327_A336_I0.7510.85
105_S505_A0.7500.85
87_A101_S0.7470.84
315_S318_F0.7460.84
348_A361_E0.7440.84
185_S369_V0.7430.84
477_D482_D0.7430.84
436_A439_D0.7410.84
439_D442_E0.7410.84
66_G95_G0.7400.84
66_G390_D0.7390.84
143_A418_Q0.7390.84
55_D61_V0.7390.84
343_A354_G0.7390.84
348_A352_I0.7290.83
277_V301_Y0.7250.83
90_Q504_S0.7230.82
421_D425_S0.7230.82
131_Q434_V0.7220.82
522_G527_G0.7220.82
442_E455_D0.7210.82
164_T386_R0.7200.82
420_R439_D0.7200.82
431_Q434_V0.7190.82
214_E362_D0.7180.82
417_M464_R0.7180.82
70_L102_V0.7170.82
347_V360_V0.7160.82
146_D149_A0.7140.82
449_A459_S0.7140.82
497_V501_A0.7120.81
525_A529_V0.7120.81
159_A180_V0.7120.81
124_T127_Q0.7110.81
475_G486_M0.7090.81
165_G498_K0.7080.81
116_L125_L0.7080.81
343_A352_I0.7050.81
524_L527_G0.7030.81
275_E278_D0.7000.80
463_L466_Q0.6990.80
525_A528_Q0.6980.80
164_T383_E0.6940.80
63_T84_V0.6930.80
216_V227_M0.6930.80
197_V381_V0.6910.79
259_P285_A0.6910.79
139_L419_L0.6900.79
420_R442_E0.6890.79
131_Q422_F0.6860.79
297_M301_Y0.6860.79
273_L297_M0.6860.79
428_G432_L0.6850.79
232_E346_S0.6850.79
29_N109_L0.6840.79
183_V192_V0.6830.79
160_A176_S0.6830.79
222_R308_L0.6830.79
405_M411_P0.6810.78
183_V395_V0.6790.78
29_N518_V0.6790.78
241_D311_R0.6770.78
229_Y329_P0.6770.78
264_N286_N0.6750.78
305_E336_I0.6750.78
237_A341_L0.6740.78
285_A341_L0.6740.78
413_T460_L0.6710.77
344_A348_A0.6690.77
246_Q275_E0.6690.77
245_V248_T0.6670.77
439_D443_V0.6660.77
129_Y132_A0.6650.77
406_P486_M0.6640.77
405_M492_V0.6640.77
357_R360_V0.6610.76
189_D344_A0.6610.76
129_Y133_A0.6610.76
275_E279_A0.6580.76
423_A426_V0.6570.76
322_S329_P0.6570.76
278_D305_E0.6560.76
30_I120_I0.6540.76
240_D315_S0.6540.76
65_D375_G0.6540.76
91_E390_D0.6520.75
41_R443_V0.6490.75
493_E498_K0.6480.75
449_A460_L0.6470.75
526_G530_G0.6470.75
136_A139_L0.6460.75
155_L395_V0.6460.75
345_G363_V0.6450.75
24_D27_S0.6430.74
233_D345_G0.6430.74
104_V289_F0.6420.74
295_D298_A0.6410.74
238_L321_L0.6410.74
136_A502_I0.6400.74
293_G301_Y0.6390.74
61_V72_E0.6390.74
234_A347_V0.6380.74
104_V505_A0.6360.74
291_D302_L0.6360.74
462_D483_V0.6350.73
339_A344_A0.6350.73
381_V384_V0.6340.73
363_V366_A0.6340.73
179_V391_S0.6330.73
237_A327_A0.6320.73
312_R317_D0.6310.73
222_R349_Q0.6290.73
414_E418_Q0.6280.73
63_T164_T0.6280.73
222_R227_M0.6280.73
462_D474_A0.6280.73
68_T386_R0.6280.73
56_S524_L0.6280.73
522_G528_Q0.6260.72
501_A505_A0.6250.72
302_L307_I0.6240.72
235_N260_D0.6230.72
341_L345_G0.6220.72
40_V99_T0.6220.72
182_A186_V0.6210.72
23_E238_L0.6210.72
222_R226_N0.6210.72
480_N484_I0.6190.72
240_D313_A0.6190.72
68_T390_D0.6190.72
58_G307_I0.6170.71
165_G387_A0.6170.71
341_L344_A0.6160.71
243_L298_A0.6140.71
485_D489_E0.6130.71
347_V353_G0.6130.71
272_Q276_M0.6120.71
343_A363_V0.6110.71
378_E382_D0.6110.71
136_A438_A0.6110.71
87_A105_S0.6090.70
423_A434_V0.6090.70
342_G349_Q0.6080.70
37_A40_V0.6080.70
268_Q272_Q0.6080.70
106_G110_S0.6060.70
179_V395_V0.6060.70
204_G374_R0.6060.70
235_N343_A0.6050.70
66_G98_T0.6030.70
165_G247_E0.6030.70
370_T374_R0.6030.70
419_L423_A0.6030.70
135_K415_L0.6020.69
178_L204_G0.6020.69
34_K37_A0.6010.69
458_D462_D0.6010.69
81_N85_E0.5990.69
52_M512_I0.5970.69
165_G202_V0.5970.69
237_A283_A0.5970.69
165_G504_S0.5960.69
519_I522_G0.5960.69
54_V521_A0.5950.69
194_T270_E0.5920.68
125_L437_F0.5920.68
416_A438_A0.5920.68
32_A77_H0.5920.68
394_V398_T0.5910.68
34_K113_E0.5910.68
292_S314_K0.5890.68
29_N512_I0.5880.68
172_K493_E0.5880.68
452_A478_A0.5870.68
115_L436_A0.5870.68
129_Y433_A0.5860.67
500_Q504_S0.5850.67
211_E333_V0.5830.67
116_L479_Y0.5830.67
474_A484_I0.5820.67
141_D401_D0.5820.67
232_E362_D0.5820.67
524_L528_Q0.5810.67
133_A503_E0.5810.67
253_E378_E0.5810.67
72_E227_M0.5810.67
202_V355_D0.5800.67
147_V174_V0.5790.66
161_T493_E0.5790.66
158_I402_G0.5780.66
107_E447_T0.5780.66
26_Q516_D0.5770.66
82_M508_A0.5770.66
210_S308_L0.5770.66
159_A162_A0.5760.66
132_A153_E0.5760.66
466_Q483_V0.5760.66
71_K241_D0.5740.66
188_D367_K0.5740.66
263_Q269_E0.5740.66
238_L289_F0.5720.66
346_S361_E0.5710.65
197_V246_Q0.5710.65
239_V290_A0.5700.65
173_G479_Y0.5700.65
406_P472_T0.5700.65
350_K359_F0.5690.65
121_H514_R0.5690.65
240_D318_F0.5690.65
442_E460_L0.5690.65
348_A354_G0.5680.65
29_N52_M0.5680.65
142_D145_I0.5680.65
388_I394_V0.5680.65
340_D343_A0.5660.65
234_A327_A0.5650.65
93_E500_Q0.5650.65
39_S43_T0.5640.64
222_R231_V0.5630.64
159_A176_S0.5630.64
342_G350_K0.5610.64
287_V360_V0.5610.64
339_A352_I0.5610.64
18_Q27_S0.5600.64
100_T104_V0.5600.64
18_Q518_V0.5600.64
148_S481_G0.5590.64
213_I217_I0.5580.64
198_K202_V0.5570.64
521_A527_G0.5560.63
522_G525_A0.5560.63
27_S30_I0.5550.63
123_T126_A0.5540.63
199_V373_L0.5530.63
442_E457_I0.5530.63
447_T450_E0.5530.63
343_A351_D0.5530.63
39_S67_V0.5520.63
442_E481_G0.5510.63
181_R184_Q0.5510.63
54_V257_T0.5500.63
272_Q275_E0.5490.62
115_L513_L0.5490.62
443_V450_E0.5490.62
228_P303_A0.5480.62
342_G346_S0.5480.62
269_E441_L0.5480.62
182_A212_L0.5480.62
266_L298_A0.5470.62
120_I428_G0.5470.62
338_A345_G0.5450.62
164_T393_G0.5440.62
237_A285_A0.5430.62
185_S208_E0.5430.62
417_M474_A0.5430.62
297_M300_H0.5430.62
112_A128_G0.5420.61
311_R314_K0.5420.61
455_D460_L0.5420.61
114_T118_Q0.5420.61
108_L506_T0.5420.61
55_D58_G0.5420.61
300_H304_K0.5420.61
183_V369_V0.5410.61
236_I327_A0.5410.61
410_A463_L0.5400.61
44_L99_T0.5400.61
344_A347_V0.5400.61
407_G491_I0.5390.61
95_G390_D0.5390.61
108_L133_A0.5380.61
207_I392_L0.5380.61
386_R415_L0.5380.61
50_D514_R0.5380.61
233_D343_A0.5370.61
351_D356_E0.5370.61
163_M175_L0.5370.61
283_A336_I0.5350.60
236_I325_T0.5340.60
303_A317_D0.5330.60
300_H307_I0.5330.60
97_G497_V0.5320.60
104_V502_I0.5310.60
240_D312_R0.5310.60
61_V389_E0.5300.60
350_K354_G0.5290.60
222_R358_I0.5290.60
197_V341_L0.5290.60
87_A91_E0.5280.59
292_S312_R0.5280.59
464_R474_A0.5260.59
40_V43_T0.5260.59
44_L47_K0.5240.59
211_E361_E0.5220.59
20_T54_V0.5220.59
411_P493_E0.5210.58
445_P461_V0.5210.58
89_T93_E0.5210.58
78_P194_T0.5200.58
466_Q472_T0.5190.58
18_Q23_E0.5190.58
255_N259_P0.5190.58
83_I512_I0.5190.58
235_N255_N0.5180.58
292_S295_D0.5180.58
342_G348_A0.5180.58
231_V327_A0.5170.58
109_L434_V0.5170.58
523_D526_G0.5170.58
511_M515_I0.5170.58
100_T497_V0.5160.58
19_R22_G0.5150.58
277_V298_A0.5150.58
158_I260_D0.5150.58
211_E372_I0.5150.58
271_E274_K0.5140.57
95_G98_T0.5140.57
406_P474_A0.5130.57
251_D255_N0.5130.57
439_D457_I0.5130.57
131_Q364_E0.5120.57
127_Q510_T0.5120.57
391_S399_L0.5110.57
104_V108_L0.5110.57
134_E421_D0.5110.57
106_G109_L0.5110.57
396_R491_I0.5100.57
254_V258_D0.5100.57
352_I357_R0.5090.57
345_G349_Q0.5090.57
83_I105_S0.5090.57
260_D264_N0.5090.57
91_E98_T0.5090.57
108_L436_A0.5080.57
239_V285_A0.5080.57
61_V393_G0.5080.57
458_D463_L0.5070.56
351_D355_D0.5070.56
432_L438_A0.5050.56
152_T519_I0.5050.56
109_L287_V0.5040.56
157_K337_E0.5030.56
122_A302_L0.5030.56
126_A511_M0.5030.56
186_V192_V0.5030.56
401_D495_L0.5030.56
92_T361_E0.5030.56
416_A443_V0.5030.56
65_D98_T0.5020.56
202_V512_I0.5020.56
53_L72_E0.5010.56
115_L428_G0.5010.56
20_T522_G0.5010.56
67_V71_K0.5000.55
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
1q3qA 4 0.9146 100 0.094 Contact Map
3ruvA 6 0.9146 100 0.101 Contact Map
3j1bA 4 0.8986 100 0.104 Contact Map
1a6dA 2 0.8879 100 0.114 Contact Map
3p9dG 1 0.9004 100 0.122 Contact Map
3ko1A 5 0.8897 100 0.124 Contact Map
1a6dB 2 0.8861 100 0.13 Contact Map
3p9dA 1 0.9288 100 0.141 Contact Map
3p9dD 2 0.9093 100 0.154 Contact Map
3p9dE 1 0.9093 100 0.156 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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