Q9HMX3 - HALSA - GREMLIN Contacts

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Q9HMX3 - Oligopeptide ABC transporter ATP-binding

UniProt:	Q9HMX3	Sequences: MSQQSIQSTADADQHSQPLVEVTDLKKHYGDGGRFSGPPVKAVDGVNFEIQEGETLGLVGESGSGKTTLGRTLIQLETATEGTVSFDGRDITKLTGSDLKQWRKNAQIVFQDPDSSLNDRMTIGEIVREPLDAHDWNSPAERRDRVKELLSSVGLQADHYYRYPHQFSGGQRQRIGIARALALEPEFMVLDEPVSALDASVQAKILNLLEDLQDEFGLTYLFIAHDLSVVRHICDRVAVMYLGKIMEIGETEELYADAKNPYTRSLLSAIPRPDPTIDRNRITLPGAPPSPRNPPAGCQFSTRCPAKIRPEAYADIDDDTWSRIEQFREVVRERTRDQMGVRDRVKRRLGTFSKYDDIEEAADDLFADVDLPAGITDTVDTAIEAVKDGRPTEAHDALTREFGGVCDTERPDMHQVSDAGRLSYCHRHDSEYDSVADTLADRSHE	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	445 (344)
Sequences:	1030 (750)
Seq/√Len:	40.4

ECOLI - RBSA PROV POTG ARAG POTA MALK FBPC MACB CYSA OPPD UGPC YCJV METN DPPF DDPD YDCT DPPD OPPF CYDC GSIA MDLA LSRA MDLB SAPD MODC CYDD YEHX MSBA YADG YTFR DDPF YOJI MLAF YPHE SAPF FEPC HISP NIKE YECC FHUC GLNQ YHDZ YHES PHNC PHNK TAUB LPTB FECE SSUB XYLG GLTL PSTB ALSA YEJF LIVG SUFC LOLD MODF THIQ ARTP FTSE UUP LIVF MGLA FETA BTUD ZNUC YBBA NIKD YDDA PHNL ETTA CCMA YNJD
BACSU - YVRA OPUAA TAGH OPUCA OPUBA MSMX OPPD YHEH YURJ DPPD METN APPD APPF RBSA YKFD YFIC SUNT YGAD CYDD BMRA YKNV YFIB YFIL YDBJ YHEI YWJA YKNU YXLF YHAQ YHCH OPPF YCBN CYDC YVFR YKOD YUSV YKPA TCYN YTRB ECFA1 YFMF FHUC YCLP BCEA YFMM PSTB1 YFMR YVCR YTLC PSTB2 YLMA TCYC YXDL ECSA SKFE YJKB ARTM FTSE YXEO SUFC GLNQ NATA YVRO ECFA2 ALBC YKNY MNTB SSUB YDIF YUFO ZNUC YTHP YCLH YHCG YYBJ EXPZ YTRE YYDI
HALSA - Q9HMX3 Q9HMW0 BTUDA Q9HHQ5 Q9HMX2 Q9HR06 Q9HNZ9 Q9HMT3 Q9HSQ7 PSTB2 Q9HMG1 Q9HRJ6 Q9HMU8 Q9HRH8 Q9HMG6 Q9HHM2 PHNC PSTB1 Q9HNY3 Q9HRV7 Y2317 Q9HRZ9 Y1631 Q9HHR7 Q9HR96 Q9HR21 Q9HT03 Q9HMI4 Q9HMC1 Q9HS04 Q9HQA8
SULSO - Q97UJ9 Q97UF2 Q97VF5 Q97YY4 Q97UY8 Q7LX64 Q97UH3 Q97VK8 Q97YP7 Q97YP3 Q97VF4 Q97ZC0 Q97VK9 Q97VC1 Q97YP8 Q97VH6 Q97X18 Q97YK2 Q97YQ7 Q97UD4 Q980W0 Q97UH4 PSTB Q97Z03 Q97W42 Q7LXM4 Q97U54 Q97UG5 Q7LY07 Q97V01 Y2030 Q97V00 Y1893 Q97VM2 Q97VY4 Q97Z56 Q7LX80 Q97YP4 Q97Z96

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
57_G	234_C	6.517	1.00
54_E	236_R	5.701	1.00
24_D	45_G	5.021	1.00
167_F	175_I	4.764	1.00
249_G	254_L	4.670	1.00
23_T	83_T	4.411	1.00
149_L	182_A	4.373	1.00
22_V	48_F	4.341	1.00
26_K	45_G	4.106	1.00
105_N	186_E	4.076	1.00
21_E	49_E	3.621	1.00
22_V	25_L	3.467	1.00
56_L	238_A	3.137	1.00
90_D	93_K	3.053	1.00
109_V	190_L	3.049	1.00
145_R	148_E	2.797	1.00
209_L	220_Y	2.794	1.00
52_E	186_E	2.790	1.00
24_D	81_E	2.761	1.00
18_P	51_Q	2.622	1.00
83_T	90_D	2.515	1.00
238_A	245_I	2.509	1.00
138_S	141_E	2.498	1.00
59_V	239_V	2.444	1.00
311_E	329_E	2.434	1.00
58_L	221_L	2.380	1.00
152_S	211_D	2.200	0.99
298_C	304_C	2.148	0.99
320_T	323_R	2.145	0.99
70_G	223_I	2.142	0.99
152_S	215_E	2.110	0.99
21_E	85_S	2.018	0.99
50_I	56_L	1.997	0.99
127_V	182_A	1.987	0.99
27_K	72_T	1.984	0.99
23_T	49_E	1.962	0.99
224_A	234_C	1.955	0.99
192_E	225_H	1.951	0.99
48_F	69_L	1.935	0.99
126_I	179_R	1.927	0.99
152_S	216_F	1.910	0.99
298_C	311_E	1.883	0.98
26_K	81_E	1.882	0.98
17_Q	52_E	1.866	0.98
20_V	50_I	1.853	0.98
179_R	195_S	1.830	0.98
109_V	173_Q	1.743	0.97
107_Q	185_P	1.741	0.97
308_I	332_R	1.734	0.97
145_R	184_E	1.729	0.97
174_R	197_L	1.722	0.97
28_H	41_K	1.717	0.97
50_I	221_L	1.672	0.97
127_V	150_L	1.649	0.96
151_S	157_A	1.637	0.96
66_K	192_E	1.623	0.96
75_Q	99_L	1.605	0.96
187_F	221_L	1.598	0.96
249_G	253_E	1.592	0.95
149_L	181_L	1.591	0.95
46_V	69_L	1.590	0.95
72_T	78_T	1.590	0.95
320_T	326_Q	1.585	0.95
325_E	329_E	1.560	0.95
202_Q	229_V	1.545	0.95
29_Y	68_T	1.488	0.93
50_I	187_F	1.479	0.93
126_I	195_S	1.475	0.93
74_I	108_I	1.470	0.93
131_L	182_A	1.469	0.93
102_W	106_A	1.467	0.93
62_S	192_E	1.456	0.93
173_Q	196_A	1.450	0.93
224_A	230_V	1.447	0.92
56_L	248_I	1.436	0.92
202_Q	226_D	1.430	0.92
311_E	316_I	1.418	0.92
323_R	326_Q	1.410	0.91
155_L	171_Q	1.383	0.91
211_D	215_E	1.365	0.90
142_R	146_V	1.362	0.90
140_A	144_D	1.358	0.90
51_Q	54_E	1.351	0.90
66_K	225_H	1.342	0.89
62_S	197_L	1.340	0.89
238_A	248_I	1.334	0.89
27_K	71_R	1.323	0.89
22_V	88_G	1.315	0.88
304_C	311_E	1.313	0.88
57_G	224_A	1.303	0.88
48_F	248_I	1.297	0.88
71_R	171_Q	1.290	0.87
264_R	306_A	1.289	0.87
24_D	47_N	1.283	0.87
75_Q	78_T	1.281	0.87
247_E	262_Y	1.277	0.87
288_P	299_Q	1.267	0.86
87_D	109_V	1.266	0.86
59_V	230_V	1.261	0.86
46_V	245_I	1.259	0.86
244_K	328_R	1.252	0.86
66_K	111_Q	1.246	0.85
169_G	174_R	1.239	0.85
308_I	311_E	1.222	0.84
143_R	147_K	1.220	0.84
29_Y	77_E	1.214	0.84
329_E	332_R	1.213	0.84
70_G	189_V	1.198	0.83
62_S	196_A	1.198	0.83
359_E	362_A	1.196	0.83
55_T	213_Q	1.195	0.83
128_R	146_V	1.182	0.82
43_V	69_L	1.175	0.82
297_G	303_R	1.170	0.81
57_G	230_V	1.167	0.81
250_E	253_E	1.161	0.81
202_Q	230_V	1.157	0.81
236_R	248_I	1.145	0.80
316_I	325_E	1.144	0.80
121_M	125_E	1.142	0.80
171_Q	179_R	1.141	0.80
204_K	209_L	1.133	0.79
67_T	108_I	1.116	0.78
20_V	189_V	1.110	0.78
44_D	244_K	1.102	0.77
286_G	289_P	1.101	0.77
350_G	354_K	1.096	0.77
145_R	149_L	1.082	0.76
19_L	58_L	1.082	0.76
109_V	177_I	1.078	0.76
300_F	303_R	1.074	0.76
357_D	361_A	1.068	0.75
134_H	183_L	1.068	0.75
298_C	329_E	1.062	0.75
281_R	284_L	1.062	0.75
131_L	137_N	1.057	0.74
289_P	303_R	1.052	0.74
350_G	357_D	1.049	0.74
360_E	363_D	1.040	0.73
176_G	179_R	1.038	0.73
356_D	359_E	1.036	0.73
359_E	363_D	1.036	0.73
237_V	254_L	1.028	0.72
307_K	311_E	1.025	0.72
185_P	192_E	1.023	0.72
66_K	191_D	1.020	0.72
67_T	269_A	1.017	0.71
196_A	202_Q	1.016	0.71
317_D	330_V	1.015	0.71
298_C	303_R	1.014	0.71
355_Y	358_I	1.007	0.71
50_I	219_T	1.007	0.71
86_F	105_N	1.003	0.70
173_Q	247_E	1.001	0.70
206_L	229_V	0.993	0.70
28_H	44_D	0.990	0.69
58_L	69_L	0.986	0.69
53_G	219_T	0.985	0.69
62_S	109_V	0.984	0.69
308_I	331_V	0.983	0.69
95_T	98_D	0.982	0.69
307_K	317_D	0.981	0.69
318_D	324_I	0.980	0.69
98_D	101_Q	0.974	0.68
62_S	174_R	0.972	0.68
31_D	38_P	0.972	0.68
27_K	43_V	0.952	0.66
122_T	161_Y	0.950	0.66
346_K	349_L	0.939	0.65
18_P	49_E	0.934	0.65
143_R	161_Y	0.933	0.65
147_K	160_Y	0.931	0.65
62_S	164_P	0.931	0.65
190_L	209_L	0.925	0.64
327_F	330_V	0.923	0.64
309_R	313_Y	0.919	0.64
230_V	237_V	0.917	0.63
269_A	273_P	0.915	0.63
62_S	173_Q	0.913	0.63
193_P	229_V	0.912	0.63
247_E	266_L	0.906	0.62
127_V	146_V	0.898	0.62
244_K	315_D	0.897	0.62
99_L	103_R	0.889	0.61
196_A	223_I	0.887	0.61
216_F	219_T	0.887	0.61
261_P	266_L	0.886	0.61
122_T	125_E	0.879	0.60
110_F	164_P	0.876	0.60
107_Q	194_V	0.870	0.59
62_S	225_H	0.869	0.59
48_F	237_V	0.869	0.59
120_R	165_H	0.867	0.59
210_E	253_E	0.865	0.59
340_G	353_S	0.862	0.59
171_Q	284_L	0.860	0.58
318_D	333_E	0.858	0.58
161_Y	246_M	0.853	0.58
73_L	167_F	0.853	0.58
60_G	63_G	0.852	0.58
135_D	184_E	0.852	0.58
168_S	198_D	0.846	0.57
181_L	208_L	0.841	0.57
29_Y	192_E	0.839	0.56
318_D	326_Q	0.839	0.56
171_Q	195_S	0.835	0.56
47_N	86_F	0.834	0.56
327_F	332_R	0.833	0.56
122_T	209_L	0.831	0.56
193_P	225_H	0.830	0.56
307_K	325_E	0.829	0.56
86_F	187_F	0.827	0.55
84_V	220_Y	0.826	0.55
44_D	299_Q	0.824	0.55
104_K	175_I	0.822	0.55
27_K	133_A	0.821	0.55
194_V	224_A	0.818	0.55
237_V	251_T	0.814	0.54
50_I	58_L	0.814	0.54
311_E	330_V	0.814	0.54
355_Y	359_E	0.813	0.54
159_H	231_R	0.813	0.54
103_R	154_G	0.812	0.54
28_H	39_P	0.812	0.54
345_V	349_L	0.809	0.54
200_S	242_L	0.807	0.54
86_F	205_I	0.806	0.53
286_G	300_F	0.805	0.53
188_M	194_V	0.803	0.53
73_L	249_G	0.799	0.53
29_Y	327_F	0.799	0.53
26_K	44_D	0.793	0.52
169_G	198_D	0.793	0.52
332_R	336_R	0.791	0.52
60_G	65_G	0.786	0.52
291_P	295_P	0.783	0.51
186_E	218_L	0.782	0.51
112_D	172_R	0.782	0.51
76_L	129_E	0.781	0.51
111_Q	191_D	0.780	0.51
172_R	204_K	0.777	0.51
284_L	297_G	0.777	0.51
41_K	44_D	0.775	0.51
316_I	330_V	0.772	0.50
321_W	327_F	0.771	0.50
319_D	327_F	0.769	0.50
318_D	321_W	0.767	0.50
268_S	282_I	0.766	0.50
290_S	297_G	0.765	0.50
89_R	98_D	0.765	0.50
128_R	209_L	0.765	0.50
19_L	187_F	0.761	0.49
311_E	325_E	0.760	0.49
358_I	361_A	0.757	0.49
226_D	229_V	0.755	0.49
188_M	220_Y	0.751	0.48
357_D	363_D	0.750	0.48
177_I	224_A	0.748	0.48
227_L	247_E	0.747	0.48
73_L	245_I	0.746	0.48
87_D	186_E	0.745	0.48
182_A	220_Y	0.744	0.48
188_M	192_E	0.744	0.48
167_F	172_R	0.742	0.48
289_P	295_P	0.736	0.47
84_V	93_K	0.732	0.47
20_V	58_L	0.732	0.47
67_T	116_S	0.731	0.47
67_T	84_V	0.730	0.46
302_T	316_I	0.730	0.46
349_L	355_Y	0.729	0.46
349_L	352_F	0.728	0.46
71_R	112_D	0.723	0.46
260_N	263_T	0.721	0.46
171_Q	175_I	0.721	0.46
148_E	152_S	0.721	0.46
223_I	226_D	0.720	0.46
304_C	329_E	0.720	0.46
179_R	189_V	0.719	0.45
358_I	363_D	0.718	0.45
87_D	105_N	0.718	0.45
55_T	196_A	0.717	0.45
196_A	229_V	0.716	0.45
173_Q	223_I	0.716	0.45
154_G	180_A	0.715	0.45
55_T	218_L	0.714	0.45
127_V	222_F	0.713	0.45
197_L	226_D	0.711	0.45
67_T	70_G	0.710	0.45
185_P	225_H	0.704	0.44
48_F	221_L	0.703	0.44
184_E	216_F	0.702	0.44
193_P	224_A	0.702	0.44
62_S	185_P	0.701	0.44
111_Q	192_E	0.700	0.44
57_G	185_P	0.700	0.44
355_Y	363_D	0.699	0.44
286_G	291_P	0.698	0.44
124_G	189_V	0.694	0.43
59_V	71_R	0.694	0.43
358_I	362_A	0.693	0.43
110_F	166_Q	0.693	0.43
111_Q	169_G	0.693	0.43
107_Q	162_R	0.691	0.43
338_Q	342_R	0.691	0.43
159_H	162_R	0.688	0.43
58_L	190_L	0.688	0.43
307_K	316_I	0.681	0.42
289_P	316_I	0.677	0.42
19_L	190_L	0.676	0.42
126_I	224_A	0.675	0.41
194_V	229_V	0.673	0.41
43_V	48_F	0.673	0.41
146_V	152_S	0.671	0.41
129_E	206_L	0.671	0.41
132_D	142_R	0.671	0.41
97_S	101_Q	0.670	0.41
108_I	193_P	0.668	0.41
60_G	168_S	0.664	0.40
289_P	300_F	0.662	0.40
60_G	66_K	0.662	0.40
325_E	328_R	0.662	0.40
201_V	223_I	0.661	0.40
98_D	104_K	0.661	0.40
285_P	288_P	0.661	0.40
65_G	191_D	0.659	0.40
316_I	358_I	0.659	0.40
185_P	188_M	0.658	0.40
21_E	274_D	0.658	0.40
73_L	89_R	0.658	0.40
288_P	291_P	0.658	0.40
316_I	321_W	0.658	0.40
117_L	177_I	0.657	0.40
227_L	254_L	0.657	0.40
337_D	340_G	0.655	0.40
130_P	209_L	0.654	0.40
75_Q	91_I	0.653	0.40
69_L	234_C	0.652	0.39
117_L	172_R	0.651	0.39
320_T	346_K	0.650	0.39
94_L	216_F	0.650	0.39
146_V	160_Y	0.649	0.39
45_G	244_K	0.648	0.39
153_V	166_Q	0.645	0.39
241_Y	303_R	0.644	0.39
280_N	305_P	0.644	0.39
287_A	334_R	0.643	0.39
107_Q	183_L	0.642	0.39
263_T	271_P	0.639	0.38
29_Y	43_V	0.639	0.38
353_S	357_D	0.637	0.38
103_R	111_Q	0.633	0.38
170_G	198_D	0.632	0.38
356_D	360_E	0.632	0.38
353_S	359_E	0.632	0.38
65_G	198_D	0.632	0.38
222_F	233_I	0.631	0.38
48_F	238_A	0.629	0.37
341_V	345_V	0.627	0.37
159_H	194_V	0.625	0.37
182_A	268_S	0.621	0.37
143_R	160_Y	0.621	0.37
118_N	126_I	0.621	0.37
318_D	322_S	0.620	0.37
51_Q	256_A	0.620	0.37
289_P	301_S	0.620	0.37
197_L	208_L	0.620	0.37
340_G	348_R	0.619	0.37
335_T	359_E	0.616	0.36
340_G	354_K	0.616	0.36
70_G	74_I	0.616	0.36
43_V	240_M	0.615	0.36
261_P	298_C	0.614	0.36
32_G	156_Q	0.612	0.36
126_I	231_R	0.610	0.36
58_L	70_G	0.608	0.36
62_S	131_L	0.607	0.36
300_F	304_C	0.607	0.36
324_I	336_R	0.606	0.35
56_L	236_R	0.606	0.35
144_D	352_F	0.603	0.35
284_L	289_P	0.601	0.35
153_V	180_A	0.600	0.35
217_G	221_L	0.600	0.35
314_A	343_D	0.598	0.35
267_L	271_P	0.597	0.35
91_I	204_K	0.596	0.35
47_N	82_G	0.593	0.34
190_L	222_F	0.593	0.34
94_L	102_W	0.590	0.34
169_G	196_A	0.590	0.34
316_I	328_R	0.589	0.34
155_L	195_S	0.588	0.34
141_E	144_D	0.587	0.34
224_A	227_L	0.585	0.34
258_A	263_T	0.585	0.34
202_Q	206_L	0.585	0.34
20_V	187_F	0.584	0.34
121_M	129_E	0.581	0.33
62_S	66_K	0.581	0.33
213_Q	220_Y	0.580	0.33
128_R	182_A	0.579	0.33
109_V	247_E	0.579	0.33
329_E	333_E	0.579	0.33
174_R	196_A	0.578	0.33
59_V	223_I	0.576	0.33
351_T	359_E	0.576	0.33
348_R	351_T	0.575	0.33
190_L	220_Y	0.573	0.33
53_G	112_D	0.573	0.33
158_D	190_L	0.573	0.33
338_Q	362_A	0.573	0.33
345_V	348_R	0.572	0.33
325_E	330_V	0.571	0.33
328_R	336_R	0.571	0.33
276_T	343_D	0.571	0.33
61_E	247_E	0.571	0.33
301_S	312_A	0.568	0.32
65_G	170_G	0.568	0.32
89_R	151_S	0.568	0.32
83_T	250_E	0.567	0.32
91_I	190_L	0.567	0.32
322_S	328_R	0.566	0.32
206_L	226_D	0.566	0.32
154_G	196_A	0.566	0.32
331_V	334_R	0.566	0.32
25_L	43_V	0.566	0.32
30_G	37_G	0.565	0.32
174_R	178_A	0.564	0.32
126_I	176_G	0.564	0.32
313_Y	324_I	0.562	0.32
66_K	195_S	0.561	0.32
86_F	128_R	0.561	0.32
303_R	307_K	0.559	0.32
354_K	362_A	0.555	0.31
110_F	188_M	0.554	0.31
319_D	330_V	0.553	0.31
339_M	345_V	0.553	0.31
164_P	226_D	0.552	0.31
338_Q	348_R	0.549	0.31
71_R	222_F	0.547	0.31
348_R	353_S	0.546	0.31
154_G	159_H	0.545	0.30
90_D	99_L	0.544	0.30
219_T	250_E	0.544	0.30
27_K	107_Q	0.544	0.30
121_M	132_D	0.543	0.30
95_T	99_L	0.543	0.30
190_L	218_L	0.543	0.30
193_P	226_D	0.543	0.30
286_G	295_P	0.540	0.30
111_Q	179_R	0.540	0.30
205_I	267_L	0.539	0.30
40_V	190_L	0.538	0.30
357_D	362_A	0.538	0.30
149_L	202_Q	0.537	0.30
310_P	313_Y	0.537	0.30
17_Q	186_E	0.537	0.30
40_V	184_E	0.535	0.30
195_S	239_V	0.535	0.30
21_E	28_H	0.533	0.30
131_L	196_A	0.533	0.30
129_E	226_D	0.533	0.30
241_Y	261_P	0.531	0.29
110_F	226_D	0.530	0.29
155_L	159_H	0.530	0.29
171_Q	174_R	0.529	0.29
280_N	360_E	0.529	0.29
171_Q	231_R	0.529	0.29
123_I	354_K	0.529	0.29
325_E	360_E	0.529	0.29
297_G	304_C	0.529	0.29
147_K	157_A	0.528	0.29
283_T	288_P	0.527	0.29
59_V	109_V	0.526	0.29
184_E	215_E	0.525	0.29
347_R	354_K	0.523	0.29
173_Q	231_R	0.522	0.29
297_G	300_F	0.522	0.29
91_I	94_L	0.522	0.29
79_A	94_L	0.522	0.29
55_T	199_A	0.520	0.29
324_I	329_E	0.519	0.28
18_P	87_D	0.519	0.28
70_G	187_F	0.519	0.28
26_K	93_K	0.518	0.28
92_T	96_G	0.517	0.28
142_R	224_A	0.516	0.28
62_S	206_L	0.516	0.28
224_A	232_H	0.515	0.28
32_G	37_G	0.515	0.28
284_L	298_C	0.515	0.28
347_R	351_T	0.515	0.28
113_P	173_Q	0.514	0.28
110_F	228_S	0.513	0.28
111_Q	195_S	0.513	0.28
352_F	361_A	0.513	0.28
23_T	248_I	0.512	0.28
239_V	247_E	0.512	0.28
56_L	122_T	0.510	0.28
37_G	184_E	0.508	0.28
146_V	236_R	0.507	0.28
62_S	226_D	0.507	0.28
284_L	304_C	0.505	0.27
327_F	336_R	0.505	0.27
42_A	153_V	0.505	0.27
222_F	229_V	0.505	0.27
276_T	280_N	0.504	0.27
20_V	339_M	0.504	0.27
126_I	164_P	0.504	0.27
237_V	255_Y	0.503	0.27
154_G	157_A	0.502	0.27
68_T	200_S	0.501	0.27
311_E	318_D	0.501	0.27
202_Q	227_L	0.500	0.27
261_P	289_P	0.500	0.27

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3tuiC	2	0.7461	100	0.339	Contact Map
4fwiB	1	0.6809	100	0.339	Contact Map
4ry2A	2	0.5506	100	0.343	Contact Map
4f4cA	1	0.5461	100	0.343	Contact Map
4q9hA	1	0.5753	100	0.368	Contact Map
1oxxK	1	0.7663	100	0.368	Contact Map
4a82A	2	0.5708	100	0.37	Contact Map
3b5xA	2	0.5708	100	0.372	Contact Map
3zdqA	2	0.5461	100	0.373	Contact Map
4mrsA	2	0.5888	100	0.373	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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