Q9HMM1 - HALSA - GREMLIN Contacts

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Q9HMM1 - Uncharacterized protein

UniProt:	Q9HMM1	Sequences: MGCARRAADADPSDAVGAYYTTPQVSQLDDVAADDLLEEFKLIRGKSNYTCILPGEEATPVDRAPCARERGYDCAVKHRCPYFADRAIASSRAFAAMTLAYFMRTAGSEVFRKRDVCVIDEAHGLAEWAEMYATIDLDEQRVPVWEDVRVPSGLDGDPERTADFADHLQGVCEGVKDELLGQDELTTEAVARRDRLQELIAELDWFIEDYRDPESATTWVVDADEEGVTIKPMDPERYLSHTVWDRANKHALLSATILNKAAFCRSVGLDPSTVALVDVEHTFPVANRPLYDVTQGKMTYENRAQTLPKLADTVVRVMATHPDEKGIVHAHSYDIAEKLAARLADAGVGDRVRTHDADTRDAELERWKASDDPEVFVAVKMEEALDLAHDLGRWQVLCKAPFLNTNDSRVAARLADGQWAWYYRTALQTIIQACGRVVRAPDDYGATYIADSSVLDVFERARGDMPPWFAAQVDAMTTPDLAEPDPAAALGETTAGVEQVEAATRSTDTGGRGSTGETQPDRAASRDDRDSEGSPVADVWNTE	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	543 (450)
Sequences:	4049 (3068)
Seq/√Len:	144.6

ECOLI - DING YOAA
BACSU - DING YPVA
HALSA - Q9HMM1 Q9HMP9 Q9HQ08
SULSO - Q980I2

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
284_P	287_N	6.883	1.00
417_G	420_A	4.577	1.00
122_A	252_L	4.491	1.00
308_P	342_R	4.464	1.00
330_A	339_L	4.187	1.00
318_M	326_G	4.147	1.00
314_V	396_V	3.991	1.00
102_F	119_I	3.806	1.00
264_C	276_L	3.295	1.00
317_V	448_Y	3.207	1.00
321_H	326_G	3.069	1.00
437_V	445_G	3.049	1.00
374_E	377_V	2.983	1.00
325_K	393_R	2.929	1.00
314_V	328_V	2.916	1.00
51_C	80_C	2.806	1.00
365_E	369_A	2.712	1.00
66_C	69_E	2.662	1.00
119_I	125_L	2.446	1.00
311_A	342_R	2.394	1.00
343_L	376_F	2.392	1.00
434_C	447_T	2.379	1.00
334_D	338_K	2.304	1.00
375_V	378_A	2.289	1.00
382_E	433_A	2.235	1.00
462_R	470_A	2.233	1.00
449_I	454_V	2.170	1.00
240_S	245_D	2.158	1.00
333_Y	378_A	2.144	1.00
41_K	92_R	2.073	1.00
330_A	376_F	2.070	1.00
239_L	244_W	2.055	1.00
388_A	440_A	2.050	1.00
154_L	157_D	2.018	1.00
350_D	355_H	2.017	1.00
217_T	221_V	2.013	1.00
124_G	383_E	2.003	1.00
456_D	460_R	1.997	1.00
394_W	448_Y	1.973	1.00
430_I	449_I	1.945	1.00
317_V	394_W	1.939	1.00
326_G	394_W	1.938	1.00
313_T	450_A	1.918	1.00
390_D	393_R	1.895	1.00
263_F	267_V	1.859	1.00
44_R	47_S	1.852	1.00
27_Q	30_D	1.833	1.00
74_C	80_C	1.827	1.00
21_T	99_L	1.818	1.00
157_D	160_R	1.815	1.00
167_H	171_V	1.790	1.00
258_L	278_D	1.787	1.00
29_D	33_A	1.787	1.00
321_H	394_W	1.779	1.00
27_Q	31_V	1.779	1.00
324_E	390_D	1.767	1.00
45_G	48_N	1.766	1.00
244_W	252_L	1.763	1.00
136_D	229_T	1.760	1.00
396_V	450_A	1.753	1.00
20_Y	31_V	1.730	1.00
198_E	202_E	1.723	1.00
427_L	461_A	1.721	1.00
170_G	173_E	1.712	1.00
18_A	118_V	1.711	1.00
311_A	339_L	1.697	1.00
330_A	336_A	1.674	1.00
247_A	250_H	1.662	1.00
461_A	466_P	1.660	1.00
171_V	178_E	1.660	1.00
374_E	378_A	1.647	1.00
45_G	49_Y	1.646	1.00
200_I	206_F	1.641	1.00
38_E	41_K	1.639	1.00
74_C	77_K	1.624	1.00
415_A	419_W	1.618	1.00
317_V	396_V	1.614	1.00
87_A	90_S	1.609	1.00
379_V	429_T	1.603	1.00
333_Y	336_A	1.600	1.00
52_I	81_P	1.593	1.00
153_G	157_D	1.585	1.00
174_G	177_D	1.580	1.00
340_A	354_T	1.569	1.00
387_L	391_L	1.558	1.00
43_I	46_K	1.541	1.00
51_C	74_C	1.536	1.00
159_E	162_A	1.533	1.00
400_A	426_A	1.532	1.00
333_Y	337_E	1.527	1.00
300_Y	303_R	1.517	1.00
462_R	466_P	1.506	1.00
298_M	301_E	1.505	1.00
270_D	273_T	1.502	1.00
368_K	391_L	1.498	1.00
154_L	158_P	1.492	1.00
19_Y	117_C	1.491	1.00
153_G	156_G	1.490	1.00
213_P	219_W	1.485	1.00
51_C	69_E	1.463	1.00
19_Y	114_R	1.460	1.00
459_E	462_R	1.458	1.00
25_V	28_L	1.458	1.00
308_P	312_D	1.448	1.00
117_C	247_A	1.448	1.00
171_V	175_V	1.447	1.00
56_E	76_V	1.440	1.00
22_T	28_L	1.427	1.00
461_A	465_M	1.411	1.00
69_E	80_C	1.407	1.00
434_C	449_I	1.405	1.00
461_A	464_D	1.395	1.00
16_V	115_D	1.394	1.00
173_E	176_K	1.387	1.00
169_Q	172_C	1.383	1.00
393_R	444_Y	1.376	1.00
155_D	158_P	1.372	1.00
160_R	163_D	1.371	1.00
176_K	180_L	1.356	1.00
360_R	381_M	1.355	1.00
59_T	62_D	1.353	1.00
351_R	366_R	1.353	1.00
260_K	276_L	1.338	1.00
397_L	447_T	1.333	1.00
395_Q	437_V	1.333	1.00
44_R	48_N	1.332	1.00
430_I	461_A	1.323	1.00
410_V	414_L	1.319	1.00
414_L	422_Y	1.315	1.00
108_S	111_F	1.314	1.00
366_R	369_A	1.309	1.00
168_L	172_C	1.306	1.00
344_A	357_A	1.306	1.00
202_E	206_F	1.301	1.00
62_D	65_P	1.297	1.00
370_S	373_P	1.297	1.00
126_A	266_S	1.289	1.00
64_A	68_R	1.280	1.00
195_R	202_E	1.280	1.00
337_E	341_A	1.279	1.00
127_E	425_T	1.276	1.00
44_R	49_Y	1.271	1.00
331_H	399_K	1.250	1.00
116_V	249_K	1.242	1.00
392_G	437_V	1.242	1.00
168_L	175_V	1.231	1.00
361_D	365_E	1.229	1.00
329_H	382_E	1.228	1.00
169_Q	176_K	1.222	1.00
154_L	159_E	1.214	1.00
307_L	311_A	1.209	1.00
318_M	375_V	1.204	1.00
189_A	192_R	1.204	1.00
185_L	190_V	1.203	1.00
176_K	183_D	1.192	1.00
182_Q	186_T	1.191	1.00
204_D	208_E	1.175	1.00
374_E	379_V	1.172	1.00
311_A	343_L	1.172	1.00
325_K	350_D	1.162	1.00
43_I	89_A	1.156	1.00
25_V	48_N	1.152	1.00
199_L	206_F	1.149	0.99
119_I	252_L	1.149	0.99
207_I	210_Y	1.147	0.99
43_I	95_A	1.146	0.99
336_A	354_T	1.145	0.99
158_P	162_A	1.145	0.99
107_G	111_F	1.144	0.99
288_R	438_V	1.140	0.99
376_F	379_V	1.137	0.99
402_F	423_Y	1.132	0.99
28_L	32_A	1.127	0.99
145_W	149_R	1.127	0.99
375_V	379_V	1.122	0.99
202_E	205_W	1.122	0.99
166_D	169_Q	1.121	0.99
26_S	30_D	1.120	0.99
205_W	209_D	1.118	0.99
153_G	158_P	1.116	0.99
351_R	370_S	1.114	0.99
199_L	205_W	1.110	0.99
71_G	74_C	1.107	0.99
172_C	176_K	1.105	0.99
172_C	183_D	1.104	0.99
411_A	415_A	1.104	0.99
166_D	170_G	1.104	0.99
362_A	365_E	1.098	0.99
392_G	445_G	1.094	0.99
139_E	143_P	1.091	0.99
199_L	202_E	1.091	0.99
195_R	199_L	1.090	0.99
154_L	161_T	1.089	0.99
161_T	164_F	1.088	0.99
21_T	102_F	1.087	0.99
69_E	74_C	1.072	0.99
411_A	414_L	1.072	0.99
102_F	117_C	1.070	0.99
340_A	344_A	1.061	0.99
327_I	395_Q	1.058	0.99
325_K	371_D	1.058	0.99
310_L	398_C	1.055	0.99
360_R	380_K	1.053	0.99
252_L	263_F	1.052	0.99
364_L	387_L	1.049	0.99
126_A	263_F	1.037	0.99
108_S	112_R	1.037	0.99
436_R	439_R	1.035	0.99
459_E	466_P	1.031	0.99
173_E	177_D	1.026	0.99
371_D	390_D	1.024	0.99
177_D	180_L	1.024	0.99
172_C	177_D	1.021	0.99
97_M	102_F	1.017	0.99
167_H	175_V	1.015	0.99
342_R	345_D	1.014	0.99
153_G	163_D	1.014	0.99
153_G	159_E	1.014	0.99
343_L	377_V	1.008	0.99
299_T	452_S	1.006	0.99
160_R	164_F	1.006	0.99
176_K	188_E	1.000	0.99
196_L	204_D	0.996	0.99
103_M	129_A	0.995	0.99
435_G	439_R	0.994	0.99
46_K	49_Y	0.994	0.99
32_A	96_A	0.991	0.98
176_K	181_G	0.991	0.98
171_V	179_L	0.991	0.98
23_P	124_G	0.990	0.98
169_Q	173_E	0.990	0.98
103_M	125_L	0.986	0.98
25_V	32_A	0.983	0.98
161_T	165_A	0.981	0.98
358_D	366_R	0.980	0.98
156_G	160_R	0.979	0.98
322_P	325_K	0.979	0.98
155_D	160_R	0.976	0.98
316_R	319_A	0.976	0.98
117_C	250_H	0.973	0.98
339_L	342_R	0.973	0.98
147_D	151_P	0.971	0.98
28_L	98_T	0.966	0.98
312_D	316_R	0.965	0.98
59_T	66_C	0.962	0.98
183_D	186_T	0.962	0.98
187_T	191_A	0.960	0.98
25_V	29_D	0.959	0.98
107_G	110_V	0.953	0.98
23_P	128_W	0.953	0.98
260_K	263_F	0.953	0.98
335_I	398_C	0.948	0.98
130_E	413_R	0.945	0.98
196_L	201_A	0.945	0.98
282_T	389_H	0.944	0.98
401_P	404_N	0.935	0.98
182_Q	193_R	0.934	0.98
152_S	156_G	0.933	0.98
178_E	182_Q	0.931	0.98
340_A	352_V	0.930	0.98
62_D	66_C	0.926	0.98
53_L	56_E	0.924	0.98
196_L	206_F	0.923	0.98
97_M	101_Y	0.921	0.98
156_G	163_D	0.920	0.98
159_E	163_D	0.917	0.98
50_T	55_G	0.915	0.97
218_T	222_D	0.914	0.97
59_T	64_A	0.914	0.97
338_K	341_A	0.914	0.97
63_R	66_C	0.910	0.97
152_S	158_P	0.909	0.97
397_L	434_C	0.907	0.97
23_P	27_Q	0.906	0.97
415_A	418_Q	0.905	0.97
176_K	186_T	0.905	0.97
25_V	30_D	0.904	0.97
181_G	184_E	0.904	0.97
161_T	171_V	0.901	0.97
204_D	207_I	0.899	0.97
163_D	167_H	0.897	0.97
158_P	163_D	0.895	0.97
412_A	415_A	0.894	0.97
408_S	415_A	0.893	0.97
197_Q	201_A	0.891	0.97
373_P	376_F	0.889	0.97
460_R	466_P	0.888	0.97
421_W	425_T	0.887	0.97
178_E	183_D	0.886	0.97
155_D	159_E	0.884	0.97
362_A	366_R	0.882	0.97
428_Q	431_I	0.878	0.97
201_A	205_W	0.877	0.97
200_I	210_Y	0.875	0.97
327_I	433_A	0.873	0.97
43_I	49_Y	0.873	0.97
334_D	337_E	0.871	0.97
315_V	319_A	0.869	0.97
316_R	320_T	0.868	0.97
196_L	202_E	0.867	0.97
197_Q	203_L	0.865	0.96
196_L	200_I	0.863	0.96
169_Q	179_L	0.859	0.96
61_V	66_C	0.858	0.96
397_L	430_I	0.857	0.96
166_D	183_D	0.857	0.96
63_R	68_R	0.854	0.96
188_E	191_A	0.853	0.96
338_K	342_R	0.850	0.96
349_G	355_H	0.850	0.96
22_T	98_T	0.845	0.96
359_T	362_A	0.844	0.96
306_T	310_L	0.842	0.96
394_W	446_A	0.841	0.96
202_E	207_I	0.840	0.96
23_P	26_S	0.838	0.96
171_V	176_K	0.838	0.96
396_V	448_Y	0.836	0.96
69_E	77_K	0.835	0.96
240_S	270_D	0.835	0.96
373_P	377_V	0.834	0.96
244_W	250_H	0.833	0.96
152_S	157_D	0.833	0.96
26_S	29_D	0.831	0.96
65_P	68_R	0.829	0.95
401_P	405_T	0.826	0.95
417_G	421_W	0.822	0.95
186_T	190_V	0.821	0.95
224_D	227_G	0.820	0.95
178_E	181_G	0.817	0.95
214_E	217_T	0.815	0.95
181_G	186_T	0.813	0.95
195_R	200_I	0.811	0.95
180_L	193_R	0.809	0.95
39_E	42_L	0.809	0.95
406_N	411_A	0.805	0.95
336_A	376_F	0.805	0.95
100_A	128_W	0.805	0.95
386_D	445_G	0.802	0.95
123_H	254_S	0.800	0.95
164_F	174_G	0.798	0.94
449_I	465_M	0.797	0.94
173_E	178_E	0.794	0.94
167_H	170_G	0.791	0.94
162_A	166_D	0.790	0.94
155_D	163_D	0.790	0.94
172_C	189_A	0.789	0.94
154_L	162_A	0.789	0.94
31_V	34_D	0.789	0.94
408_S	412_A	0.786	0.94
186_T	189_A	0.784	0.94
307_L	310_L	0.778	0.94
81_P	84_A	0.777	0.94
171_V	180_L	0.776	0.94
171_V	182_Q	0.776	0.94
310_L	314_V	0.775	0.94
153_G	161_T	0.774	0.94
459_E	464_D	0.773	0.93
154_L	164_F	0.770	0.93
196_L	203_L	0.769	0.93
172_C	175_V	0.766	0.93
154_L	165_A	0.765	0.93
182_Q	185_L	0.764	0.93
432_Q	435_G	0.764	0.93
203_L	207_I	0.764	0.93
358_D	362_A	0.762	0.93
157_D	161_T	0.761	0.93
197_Q	205_W	0.761	0.93
182_Q	189_A	0.760	0.93
176_K	187_T	0.758	0.93
341_A	345_D	0.753	0.93
351_R	372_D	0.751	0.92
309_K	312_D	0.751	0.92
42_L	96_A	0.751	0.92
195_R	209_D	0.749	0.92
382_E	431_I	0.748	0.92
315_V	348_V	0.747	0.92
163_D	166_D	0.741	0.92
157_D	163_D	0.741	0.92
410_V	422_Y	0.741	0.92
330_A	377_V	0.739	0.92
138_D	141_R	0.739	0.92
363_E	375_V	0.739	0.92
310_L	450_A	0.738	0.92
423_Y	460_R	0.738	0.92
172_C	188_E	0.737	0.92
307_L	335_I	0.735	0.92
200_I	203_L	0.735	0.92
402_F	461_A	0.734	0.92
325_K	394_W	0.733	0.92
315_V	347_G	0.733	0.92
176_K	193_R	0.732	0.92
45_G	98_T	0.731	0.91
28_L	31_V	0.730	0.91
72_Y	77_K	0.729	0.91
183_D	193_R	0.728	0.91
371_D	391_L	0.727	0.91
173_E	180_L	0.726	0.91
52_I	56_E	0.726	0.91
130_E	134_T	0.725	0.91
410_V	421_W	0.725	0.91
434_C	468_W	0.724	0.91
167_H	172_C	0.724	0.91
127_E	131_M	0.721	0.91
63_R	69_E	0.720	0.91
321_H	393_R	0.718	0.91
169_Q	182_Q	0.718	0.91
403_L	425_T	0.715	0.91
198_E	204_D	0.714	0.90
293_V	313_T	0.714	0.90
194_D	198_E	0.713	0.90
182_Q	192_R	0.712	0.90
307_L	339_L	0.711	0.90
154_L	160_R	0.711	0.90
170_G	176_K	0.708	0.90
187_T	190_V	0.708	0.90
198_E	205_W	0.708	0.90
254_S	386_D	0.702	0.90
254_S	327_I	0.700	0.90
59_T	65_P	0.699	0.90
304_A	338_K	0.699	0.90
347_G	350_D	0.698	0.89
419_W	423_Y	0.697	0.89
101_Y	105_T	0.697	0.89
283_F	288_R	0.695	0.89
155_D	161_T	0.695	0.89
195_R	203_L	0.695	0.89
432_Q	439_R	0.694	0.89
38_E	42_L	0.694	0.89
280_E	467_P	0.694	0.89
427_L	430_I	0.694	0.89
200_I	207_I	0.693	0.89
155_D	162_A	0.693	0.89
194_D	203_L	0.692	0.89
317_V	450_A	0.687	0.89
198_E	207_I	0.686	0.89
198_E	210_Y	0.684	0.89
24_Q	30_D	0.684	0.89
255_A	283_F	0.683	0.88
29_D	32_A	0.682	0.88
39_E	93_A	0.682	0.88
27_Q	329_H	0.681	0.88
180_L	186_T	0.680	0.88
351_R	354_T	0.680	0.88
31_V	96_A	0.678	0.88
156_G	162_A	0.676	0.88
459_E	465_M	0.675	0.88
24_Q	34_D	0.674	0.88
297_K	313_T	0.672	0.88
197_Q	206_F	0.671	0.88
331_H	382_E	0.670	0.87
26_S	31_V	0.669	0.87
242_T	245_D	0.668	0.87
187_T	192_R	0.668	0.87
153_G	170_G	0.668	0.87
170_G	208_E	0.666	0.87
204_D	209_D	0.665	0.87
76_V	79_R	0.665	0.87
348_V	351_R	0.663	0.87
212_D	215_S	0.662	0.87
167_H	181_G	0.657	0.86
407_D	410_V	0.655	0.86
159_E	164_F	0.655	0.86
409_R	413_R	0.653	0.86
327_I	387_L	0.652	0.86
27_Q	98_T	0.650	0.86
44_R	52_I	0.650	0.86
178_E	187_T	0.649	0.86
289_P	295_Q	0.649	0.86
176_K	182_Q	0.649	0.86
389_H	440_A	0.647	0.86
260_K	264_C	0.643	0.85
121_E	436_R	0.642	0.85
169_Q	183_D	0.642	0.85
185_L	191_A	0.641	0.85
121_E	432_Q	0.641	0.85
206_F	210_Y	0.640	0.85
52_I	55_G	0.639	0.85
194_D	200_I	0.636	0.85
24_Q	28_L	0.635	0.85
200_I	205_W	0.634	0.84
430_I	454_V	0.634	0.84
315_V	343_L	0.633	0.84
59_T	69_E	0.632	0.84
427_L	464_D	0.630	0.84
292_D	448_Y	0.630	0.84
153_G	160_R	0.628	0.84
254_S	257_I	0.627	0.84
155_D	164_F	0.627	0.84
319_A	347_G	0.626	0.84
371_D	374_E	0.624	0.84
297_K	300_Y	0.623	0.83
133_A	238_Y	0.623	0.83
408_S	411_A	0.622	0.83
432_Q	436_R	0.622	0.83
198_E	201_A	0.621	0.83
349_G	353_R	0.620	0.83
43_I	47_S	0.620	0.83
195_R	210_Y	0.618	0.83
126_A	250_H	0.613	0.82
184_E	190_V	0.611	0.82
152_S	162_A	0.611	0.82
167_H	185_L	0.611	0.82
152_S	155_D	0.611	0.82
137_L	273_T	0.609	0.82
196_L	199_L	0.607	0.82
341_A	344_A	0.606	0.82
167_H	186_T	0.604	0.82
161_T	175_V	0.604	0.82
361_D	390_D	0.603	0.81
313_T	316_R	0.603	0.81
156_G	164_F	0.603	0.81
68_R	71_G	0.602	0.81
188_E	193_R	0.601	0.81
121_E	439_R	0.601	0.81
409_R	412_A	0.600	0.81
350_D	353_R	0.600	0.81
319_A	349_G	0.599	0.81
162_A	165_A	0.597	0.81
190_V	193_R	0.597	0.81
353_R	373_P	0.595	0.81
344_A	349_G	0.594	0.80
66_C	78_H	0.594	0.80
447_T	468_W	0.593	0.80
178_E	184_E	0.592	0.80
103_M	230_I	0.592	0.80
128_W	131_M	0.592	0.80
206_F	209_D	0.591	0.80
325_K	444_Y	0.588	0.80
177_D	182_Q	0.588	0.80
143_P	146_E	0.587	0.80
169_Q	178_E	0.587	0.80
304_A	308_P	0.587	0.80
185_L	192_R	0.586	0.80
141_R	202_E	0.586	0.80
180_L	189_A	0.586	0.80
297_K	301_E	0.584	0.79
385_L	438_V	0.583	0.79
179_L	183_D	0.583	0.79
100_A	132_Y	0.582	0.79
44_R	402_F	0.581	0.79
256_T	439_R	0.581	0.79
194_D	201_A	0.581	0.79
364_L	385_L	0.580	0.79
24_Q	27_Q	0.580	0.79
148_V	213_P	0.580	0.79
407_D	414_L	0.577	0.79
180_L	187_T	0.576	0.78
157_D	165_A	0.576	0.78
454_V	465_M	0.576	0.78
353_R	370_S	0.576	0.78
169_Q	181_G	0.576	0.78
208_E	212_D	0.576	0.78
58_A	62_D	0.575	0.78
158_P	161_T	0.575	0.78
462_R	465_M	0.574	0.78
289_P	434_C	0.574	0.78
183_D	192_R	0.574	0.78
289_P	468_W	0.573	0.78
27_Q	32_A	0.571	0.78
181_G	192_R	0.571	0.78
205_W	210_Y	0.570	0.78
382_E	385_L	0.570	0.78
156_G	159_E	0.570	0.78
366_R	370_S	0.570	0.78
88_I	92_R	0.570	0.78
158_P	167_H	0.569	0.78
115_D	118_V	0.568	0.77
34_D	255_A	0.568	0.77
361_D	364_L	0.567	0.77
163_D	174_G	0.567	0.77
183_D	187_T	0.566	0.77
298_M	302_N	0.566	0.77
423_Y	465_M	0.565	0.77
183_D	188_E	0.565	0.77
201_A	204_D	0.565	0.77
61_V	67_A	0.563	0.77
131_M	134_T	0.562	0.77
416_D	420_A	0.562	0.77
81_P	399_K	0.559	0.76
153_G	162_A	0.559	0.76
126_A	130_E	0.559	0.76
172_C	184_E	0.559	0.76
235_P	259_N	0.558	0.76
59_T	63_R	0.558	0.76
174_G	181_G	0.558	0.76
168_L	176_K	0.557	0.76
291_Y	449_I	0.556	0.76
170_G	174_G	0.556	0.76
307_L	342_R	0.555	0.76
167_H	182_Q	0.555	0.76
262_A	266_S	0.553	0.76
158_P	165_A	0.553	0.76
179_L	187_T	0.552	0.75
194_D	204_D	0.552	0.75
188_E	192_R	0.552	0.75
166_D	174_G	0.552	0.75
64_A	69_E	0.551	0.75
289_P	294_T	0.550	0.75
200_I	209_D	0.550	0.75
66_C	74_C	0.550	0.75
199_L	209_D	0.550	0.75
172_C	178_E	0.549	0.75
297_K	302_N	0.549	0.75
53_L	57_E	0.548	0.75
195_R	204_D	0.545	0.75
99_L	329_H	0.544	0.74
101_Y	104_R	0.543	0.74
438_V	443_D	0.543	0.74
171_V	174_G	0.543	0.74
311_A	347_G	0.542	0.74
41_K	85_D	0.542	0.74
194_D	197_Q	0.542	0.74
40_F	92_R	0.542	0.74
163_D	170_G	0.541	0.74
32_A	40_F	0.539	0.74
121_E	435_G	0.537	0.73
303_R	308_P	0.537	0.73
172_C	179_L	0.537	0.73
156_G	302_N	0.536	0.73
66_C	71_G	0.535	0.73
160_R	167_H	0.535	0.73
403_L	414_L	0.535	0.73
209_D	212_D	0.534	0.73
32_A	42_L	0.534	0.73
81_P	382_E	0.533	0.73
179_L	189_A	0.533	0.73
232_P	235_P	0.532	0.73
183_D	191_A	0.532	0.73
46_K	105_T	0.531	0.73
28_L	33_A	0.531	0.73
184_E	189_A	0.531	0.73
175_V	183_D	0.526	0.72
166_D	186_T	0.526	0.72
181_G	191_A	0.526	0.72
116_V	251_A	0.526	0.72
389_H	392_G	0.524	0.72
308_P	338_K	0.524	0.72
174_G	186_T	0.523	0.72
439_R	443_D	0.523	0.72
176_K	185_L	0.520	0.71
414_L	418_Q	0.520	0.71
217_T	222_D	0.519	0.71
346_A	349_G	0.518	0.71
203_L	206_F	0.518	0.71
200_I	211_R	0.517	0.71
248_N	463_G	0.517	0.71
467_P	470_A	0.517	0.71
39_E	88_I	0.516	0.71
80_C	399_K	0.516	0.71
67_A	100_A	0.515	0.70
71_G	77_K	0.515	0.70
410_V	413_R	0.514	0.70
106_A	243_V	0.513	0.70
130_E	231_K	0.513	0.70
365_E	368_K	0.513	0.70
82_Y	86_R	0.512	0.70
26_S	33_A	0.511	0.70
126_A	244_W	0.511	0.70
99_L	105_T	0.511	0.70
156_G	161_T	0.511	0.70
285_V	288_R	0.510	0.70
162_A	169_Q	0.509	0.69
170_G	178_E	0.509	0.69
43_I	48_N	0.508	0.69
200_I	204_D	0.507	0.69
290_L	446_A	0.506	0.69
166_D	175_V	0.505	0.69
197_Q	202_E	0.505	0.69
85_D	426_A	0.503	0.69
83_F	86_R	0.502	0.68
353_R	366_R	0.502	0.68
367_W	373_P	0.502	0.68
140_Q	396_V	0.501	0.68
45_G	101_Y	0.500	0.68

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4a15A	1	0.8398	100	0.4	Contact Map
3crvA	1	0.8103	100	0.437	Contact Map
2vl7A	1	0.7201	100	0.471	Contact Map
1gkuB	1	0.6869	99.9	0.804	Contact Map
3fhoA	2	0.4954	99.9	0.817	Contact Map
4dduA	1	0.7182	99.8	0.834	Contact Map
4d25A	1	0.5764	99.8	0.838	Contact Map
4kbfA	2	0.558	99.8	0.84	Contact Map
3oiyA	1	0.639	99.8	0.841	Contact Map
2db3A	1	0.5691	99.8	0.841	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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