SYFB - HALSA - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

SYFB - Phenylalanine--tRNA ligase beta subunit

UniProt:	Q9HMK3	Sequences: MPVVDIDPDELRRLTGHRSKDDDELRQDLFGLGIEYEGETEDGDFKLEFEADRLDRLSVEGIARSLRYHAGDDRGVDIPDTNAPEWAIDVTDVPADRPYVTGAVIRGVDLDADALDSLIQLQEKLHATMGRKRAKGAIGIHDLAMLKGDTVDGDGTAARSLTYTGIDPDGDTFVPLDDDAERTPADVLTEHPTGETYADLLADHDTYPAIYDDIGLFSFPPVINGRRTEVTTDSRELFVELTGTDQWTIDRMCAIICYALDARGATIEDVTVDYPDRELHRPDFAVRTKHVSHDRIETLLGVEFTTEAVVDLAERAGLDATPTDDGYDVEIPPYRVDVRHPVDVVDDLGRAYDFNDLTPRYPDVNTIGGRTESSRLERSVRQALVGLGFEDLLNFNMTSEAENFDRMRLTPDHDAVGAAQPATIAEPYSQDFTILRTWALPSLAMVLETNTHHAYPQDLAEVGFAAHADGDTQTGVAERRTVAAVLARNDASYEDAKARLQALCDEFAVALETPPTTHPSFIDGRAATIEIDGQPAGVIGELHPGVIVEHDVEVPVAGFEFELDALR	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	567 (526)
Sequences:	4431 (3145)
Seq/√Len:	137.1

ECOLI - SYFB
BACSU - SYFB
HALSA - SYFB
SULSO - SYFB

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
164_T	236_E	5.725	1.00
484_A	559_F	5.138	1.00
186_D	194_G	4.415	1.00
186_D	196_T	3.936	1.00
447_L	485_V	3.735	1.00
102_G	238_F	3.575	1.00
161_L	218_S	3.377	1.00
104_V	163_Y	3.322	1.00
318_L	338_V	3.143	1.00
514_P	528_T	3.119	1.00
105_I	239_V	3.094	1.00
21_D	24_E	3.047	1.00
528_T	535_P	2.982	1.00
192_P	226_R	2.842	1.00
297_E	303_E	2.810	1.00
292_S	341_P	2.803	1.00
525_R	541_E	2.792	1.00
514_P	530_E	2.749	1.00
165_G	231_T	2.743	1.00
530_E	535_P	2.721	1.00
178_D	205_D	2.710	1.00
394_N	446_V	2.682	1.00
13_R	124_K	2.643	1.00
100_V	161_L	2.607	1.00
400_E	433_T	2.579	1.00
207_Y	255_I	2.574	1.00
167_D	214_I	2.533	1.00
141_H	160_S	2.498	1.00
290_H	328_D	2.482	1.00
295_R	341_P	2.478	1.00
106_R	236_E	2.457	1.00
312_L	351_A	2.394	1.00
37_E	48_E	2.376	1.00
440_L	558_G	2.358	1.00
479_R	562_E	2.347	1.00
189_T	195_E	2.292	1.00
117_S	121_L	2.292	1.00
305_T	308_A	2.290	1.00
296_I	309_V	2.203	1.00
389_F	499_R	2.201	1.00
293_H	309_V	2.188	1.00
176_L	197_Y	2.169	1.00
100_V	218_S	2.160	1.00
119_I	123_E	2.123	1.00
291_V	344_V	2.119	1.00
392_L	459_L	2.111	1.00
217_F	228_T	2.097	1.00
112_A	122_Q	2.096	1.00
400_E	423_T	2.075	1.00
311_D	315_R	2.070	1.00
16_G	74_R	2.045	1.00
204_H	255_I	2.036	1.00
534_Q	565_A	2.021	1.00
270_V	333_P	2.001	1.00
188_L	194_G	1.997	1.00
288_T	330_E	1.997	1.00
308_A	311_D	1.988	1.00
288_T	328_D	1.983	1.00
166_I	217_F	1.972	1.00
299_L	342_V	1.964	1.00
329_V	344_V	1.948	1.00
23_D	27_Q	1.932	1.00
99_Y	279_L	1.895	1.00
129_M	146_L	1.882	1.00
300_L	349_G	1.881	1.00
96_D	175_P	1.877	1.00
187_V	219_F	1.860	1.00
291_V	296_I	1.843	1.00
392_L	446_V	1.836	1.00
174_V	185_A	1.823	1.00
541_E	555_P	1.811	1.00
392_L	443_L	1.779	1.00
531_I	536_A	1.757	1.00
523_D	543_H	1.755	1.00
537_G	561_F	1.755	1.00
92_D	172_T	1.746	1.00
168_P	213_D	1.744	1.00
32_L	69_H	1.736	1.00
122_Q	133_R	1.722	1.00
297_E	302_V	1.716	1.00
310_V	314_E	1.692	1.00
26_R	39_E	1.691	1.00
319_D	330_E	1.687	1.00
174_V	211_Y	1.679	1.00
212_D	215_G	1.670	1.00
126_H	133_R	1.669	1.00
496_A	539_I	1.665	1.00
207_Y	256_I	1.647	1.00
331_I	338_V	1.642	1.00
207_Y	252_M	1.640	1.00
385_V	460_A	1.637	1.00
384_L	482_V	1.631	1.00
469_D	477_A	1.625	1.00
530_E	533_G	1.600	1.00
293_H	306_T	1.594	1.00
215_G	227_R	1.592	1.00
25_L	66_L	1.592	1.00
486_L	496_A	1.589	1.00
167_D	215_G	1.588	1.00
295_R	345_V	1.584	1.00
504_C	511_L	1.571	1.00
438_W	441_P	1.543	1.00
516_T	528_T	1.542	1.00
211_Y	216_L	1.538	1.00
500_L	504_C	1.532	1.00
268_E	333_P	1.529	1.00
101_T	273_D	1.521	1.00
163_Y	238_F	1.518	1.00
158_A	239_V	1.516	1.00
28_D	70_A	1.510	1.00
7_D	42_D	1.510	1.00
541_E	557_A	1.498	1.00
459_L	485_V	1.497	1.00
521_F	526_A	1.489	1.00
58_S	155_G	1.489	1.00
380_V	563_L	1.486	1.00
109_D	235_R	1.478	1.00
500_L	559_F	1.476	1.00
522_I	544_P	1.448	1.00
223_I	260_L	1.446	1.00
310_V	327_Y	1.443	1.00
47_L	62_I	1.442	1.00
292_S	295_R	1.437	1.00
289_K	338_V	1.434	1.00
446_V	459_L	1.429	1.00
222_V	252_M	1.427	1.00
64_R	334_Y	1.424	1.00
321_T	328_D	1.421	1.00
481_T	560_E	1.420	1.00
101_T	272_V	1.410	1.00
88_I	238_F	1.406	1.00
91_T	172_T	1.401	1.00
8_P	22_D	1.401	1.00
15_T	66_L	1.395	1.00
22_D	43_G	1.389	1.00
444_A	485_V	1.389	1.00
188_L	226_R	1.386	1.00
226_R	229_E	1.380	1.00
443_L	483_A	1.380	1.00
293_H	327_Y	1.380	1.00
521_F	538_V	1.374	1.00
448_E	452_H	1.374	1.00
93_V	175_P	1.373	1.00
308_A	356_D	1.372	1.00
168_P	212_D	1.367	1.00
295_R	298_T	1.366	1.00
122_Q	126_H	1.366	1.00
71_G	311_D	1.364	1.00
107_G	235_R	1.360	1.00
299_L	345_V	1.356	1.00
304_F	309_V	1.356	1.00
522_I	543_H	1.353	1.00
443_L	485_V	1.351	1.00
462_V	563_L	1.349	1.00
371_T	374_S	1.349	1.00
314_E	320_A	1.347	1.00
107_G	236_E	1.343	1.00
34_I	56_R	1.341	1.00
110_L	136_G	1.333	1.00
370_R	378_R	1.331	1.00
131_R	261_D	1.331	1.00
313_A	344_V	1.324	1.00
318_L	329_V	1.315	1.00
484_A	496_A	1.312	1.00
521_F	558_G	1.309	1.00
208_P	220_P	1.307	1.00
96_D	248_T	1.305	1.00
387_L	502_A	1.302	1.00
172_T	213_D	1.298	1.00
310_V	322_P	1.292	1.00
98_P	243_G	1.288	1.00
31_G	355_N	1.281	1.00
176_L	185_A	1.276	1.00
38_G	46_K	1.271	1.00
389_F	486_L	1.269	1.00
405_D	419_A	1.266	1.00
321_T	330_E	1.263	1.00
320_A	327_Y	1.254	1.00
219_F	256_I	1.251	1.00
22_D	26_R	1.249	1.00
287_R	331_I	1.249	1.00
8_P	12_R	1.246	1.00
288_T	331_I	1.244	1.00
49_F	57_L	1.243	1.00
423_T	434_I	1.241	1.00
175_P	206_T	1.240	1.00
121_L	143_L	1.239	1.00
512_E	533_G	1.237	1.00
383_A	502_A	1.232	1.00
35_E	48_E	1.232	1.00
352_Y	356_D	1.231	1.00
88_I	166_I	1.223	1.00
204_H	207_Y	1.223	1.00
296_I	348_L	1.223	1.00
67_R	73_D	1.214	1.00
451_T	554_V	1.202	1.00
28_D	69_H	1.200	1.00
318_L	331_I	1.196	1.00
465_A	481_T	1.193	1.00
291_V	345_V	1.191	1.00
100_V	171_D	1.188	1.00
90_V	102_G	1.185	1.00
480_R	564_D	1.176	0.99
123_E	126_H	1.174	0.99
26_R	45_F	1.171	0.99
71_G	315_R	1.171	0.99
144_A	147_K	1.170	0.99
110_L	137_A	1.168	0.99
481_T	562_E	1.167	0.99
141_H	158_A	1.161	0.99
389_F	484_A	1.158	0.99
119_I	122_Q	1.155	0.99
171_D	218_S	1.154	0.99
513_T	529_I	1.153	0.99
5_D	46_K	1.151	0.99
500_L	529_I	1.142	0.99
380_V	503_L	1.142	0.99
377_E	480_R	1.138	0.99
178_D	184_P	1.137	0.99
439_A	442_S	1.137	0.99
209_A	216_L	1.130	0.99
308_A	352_Y	1.129	0.99
404_F	407_M	1.129	0.99
141_H	239_V	1.127	0.99
24_E	27_Q	1.127	0.99
165_G	233_D	1.122	0.99
310_V	320_A	1.122	0.99
108_V	137_A	1.117	0.99
462_V	482_V	1.113	0.99
500_L	539_I	1.110	0.99
109_D	112_A	1.109	0.99
294_D	298_T	1.104	0.99
314_E	319_D	1.096	0.99
171_D	217_F	1.093	0.99
309_V	348_L	1.091	0.99
342_V	345_V	1.090	0.99
259_A	265_A	1.086	0.99
163_Y	236_E	1.084	0.99
248_T	252_M	1.084	0.99
34_I	47_L	1.082	0.99
160_S	239_V	1.075	0.99
295_R	299_L	1.074	0.99
341_P	345_V	1.074	0.99
467_H	479_R	1.072	0.99
287_R	339_R	1.067	0.99
529_I	537_G	1.065	0.99
222_V	249_I	1.062	0.99
164_T	235_R	1.060	0.99
545_G	549_E	1.060	0.99
546_V	549_E	1.051	0.99
245_D	248_T	1.051	0.99
54_L	336_V	1.049	0.99
562_E	565_A	1.045	0.99
308_A	312_L	1.043	0.99
444_A	542_L	1.042	0.99
496_A	559_F	1.038	0.99
484_A	500_L	1.036	0.99
408_R	545_G	1.032	0.99
302_V	358_T	1.031	0.99
523_D	544_P	1.026	0.99
191_H	195_E	1.024	0.99
210_I	244_T	1.023	0.99
184_P	196_T	1.023	0.99
525_R	557_A	1.022	0.99
178_D	196_T	1.017	0.98
19_S	25_L	1.009	0.98
312_L	352_Y	1.006	0.98
124_K	143_L	1.005	0.98
349_G	354_F	1.005	0.98
486_L	499_R	0.999	0.98
387_L	499_R	0.998	0.98
311_D	314_E	0.996	0.98
9_D	12_R	0.996	0.98
195_E	258_Y	0.995	0.98
12_R	17_H	0.991	0.98
383_A	506_E	0.988	0.98
144_A	236_E	0.987	0.98
389_F	458_D	0.987	0.98
19_S	70_A	0.983	0.98
100_V	244_T	0.979	0.98
159_R	224_N	0.972	0.98
33_G	56_R	0.968	0.98
405_D	410_T	0.967	0.98
174_V	187_V	0.965	0.98
349_G	357_L	0.964	0.98
406_R	549_E	0.963	0.98
14_L	147_K	0.963	0.98
401_A	405_D	0.960	0.98
7_D	59_V	0.959	0.98
307_E	311_D	0.958	0.98
381_R	462_V	0.955	0.98
294_D	325_D	0.955	0.98
19_S	72_D	0.954	0.98
68_Y	351_A	0.953	0.98
217_F	227_R	0.951	0.98
6_I	62_I	0.950	0.98
12_R	18_R	0.950	0.98
306_T	327_Y	0.945	0.98
494_E	497_K	0.945	0.98
322_P	325_D	0.945	0.98
178_D	204_H	0.943	0.98
96_D	245_D	0.943	0.98
206_T	255_I	0.941	0.97
318_L	347_D	0.937	0.97
243_G	246_Q	0.934	0.97
29_L	62_I	0.933	0.97
230_V	237_L	0.933	0.97
512_E	530_E	0.932	0.97
535_P	538_V	0.932	0.97
286_V	319_D	0.931	0.97
117_S	122_Q	0.931	0.97
397_M	435_L	0.928	0.97
306_T	322_P	0.927	0.97
518_H	538_V	0.925	0.97
32_L	351_A	0.924	0.97
504_C	509_V	0.923	0.97
456_P	489_N	0.922	0.97
290_H	326_G	0.921	0.97
421_P	437_T	0.917	0.97
547_I	552_V	0.913	0.97
207_Y	219_F	0.910	0.97
174_V	209_A	0.908	0.97
93_V	96_D	0.907	0.97
230_V	234_S	0.907	0.97
304_F	352_Y	0.905	0.97
516_T	526_A	0.904	0.97
518_H	521_F	0.897	0.97
9_D	42_D	0.896	0.97
27_Q	31_G	0.891	0.97
501_Q	513_T	0.891	0.97
60_E	148_G	0.890	0.96
485_V	558_G	0.888	0.96
171_D	238_F	0.887	0.96
542_L	558_G	0.877	0.96
542_L	547_I	0.877	0.96
284_F	333_P	0.874	0.96
464_F	478_E	0.868	0.96
209_A	219_F	0.861	0.96
528_T	538_V	0.860	0.96
497_K	501_Q	0.860	0.96
105_I	236_E	0.859	0.96
445_M	449_T	0.856	0.96
563_L	566_L	0.855	0.96
171_D	244_T	0.849	0.95
296_I	345_V	0.849	0.95
295_R	342_V	0.848	0.95
442_S	463_G	0.848	0.95
491_A	495_D	0.844	0.95
34_I	48_E	0.842	0.95
131_R	146_L	0.840	0.95
498_A	501_Q	0.839	0.95
34_I	49_F	0.838	0.95
187_V	209_A	0.837	0.95
444_A	550_H	0.837	0.95
89_D	169_D	0.832	0.95
306_T	310_V	0.829	0.95
36_Y	47_L	0.828	0.95
68_Y	316_A	0.827	0.95
226_R	231_T	0.827	0.95
106_R	163_Y	0.827	0.95
76_V	79_P	0.825	0.95
377_E	462_V	0.824	0.95
187_V	216_L	0.821	0.94
100_V	210_I	0.818	0.94
190_E	224_N	0.817	0.94
195_E	229_E	0.816	0.94
158_A	241_L	0.813	0.94
14_L	143_L	0.812	0.94
59_V	129_M	0.812	0.94
404_F	409_L	0.811	0.94
218_S	244_T	0.810	0.94
104_V	238_F	0.809	0.94
442_S	466_A	0.807	0.94
451_T	487_A	0.806	0.94
338_V	344_V	0.803	0.94
117_S	136_G	0.799	0.94
164_T	233_D	0.793	0.93
71_G	308_A	0.790	0.93
167_D	212_D	0.790	0.93
317_G	334_Y	0.787	0.93
100_V	241_L	0.787	0.93
512_E	532_D	0.786	0.93
401_A	406_R	0.784	0.93
384_L	503_L	0.784	0.93
26_R	36_Y	0.783	0.93
243_G	267_I	0.783	0.93
161_L	225_G	0.783	0.93
64_R	426_E	0.782	0.93
76_V	81_T	0.782	0.93
279_L	282_P	0.782	0.93
379_S	382_Q	0.781	0.93
160_S	218_S	0.781	0.93
37_E	49_F	0.779	0.93
92_D	177_D	0.779	0.93
108_V	236_E	0.776	0.93
165_G	227_R	0.775	0.93
405_D	418_A	0.769	0.92
277_R	280_H	0.768	0.92
547_I	555_P	0.768	0.92
6_I	59_V	0.767	0.92
16_G	72_D	0.765	0.92
88_I	102_G	0.762	0.92
380_V	482_V	0.761	0.92
309_V	345_V	0.759	0.92
56_R	65_S	0.758	0.92
185_A	211_Y	0.757	0.92
373_S	564_D	0.755	0.92
289_K	329_V	0.755	0.92
175_P	248_T	0.755	0.92
545_G	548_V	0.752	0.91
7_D	127_A	0.751	0.91
8_P	45_F	0.750	0.91
310_V	323_T	0.748	0.91
290_H	323_T	0.748	0.91
487_A	554_V	0.747	0.91
372_E	376_L	0.745	0.91
166_I	171_D	0.744	0.91
468_A	476_V	0.744	0.91
219_F	222_V	0.743	0.91
370_R	374_S	0.743	0.91
288_T	321_T	0.743	0.91
400_E	434_I	0.743	0.91
167_D	213_D	0.742	0.91
121_L	140_I	0.741	0.91
421_P	434_I	0.741	0.91
430_Q	433_T	0.738	0.91
138_I	224_N	0.737	0.91
210_I	225_G	0.735	0.91
293_H	297_E	0.735	0.91
482_V	559_F	0.733	0.90
17_H	72_D	0.733	0.90
112_A	121_L	0.731	0.90
436_R	463_G	0.730	0.90
552_V	556_V	0.727	0.90
172_T	175_P	0.727	0.90
137_A	140_I	0.726	0.90
189_T	223_I	0.723	0.90
39_E	43_G	0.721	0.90
297_E	306_T	0.720	0.90
95_A	245_D	0.720	0.90
407_M	441_P	0.719	0.90
447_L	487_A	0.719	0.90
323_T	326_G	0.717	0.89
24_E	28_D	0.717	0.89
404_F	421_P	0.716	0.89
110_L	232_T	0.715	0.89
87_A	106_R	0.714	0.89
232_T	235_R	0.711	0.89
76_V	80_D	0.711	0.89
185_A	209_A	0.708	0.89
486_L	491_A	0.707	0.89
9_D	41_E	0.706	0.89
276_D	279_L	0.706	0.89
381_R	391_D	0.705	0.89
197_Y	209_A	0.704	0.89
464_F	480_R	0.703	0.89
436_R	461_E	0.703	0.89
188_L	192_P	0.702	0.88
105_I	237_L	0.700	0.88
383_A	386_G	0.700	0.88
208_P	244_T	0.699	0.88
166_I	238_F	0.697	0.88
7_D	129_M	0.696	0.88
40_T	46_K	0.695	0.88
286_V	333_P	0.692	0.88
384_L	484_A	0.691	0.88
187_V	211_Y	0.691	0.88
270_V	286_V	0.689	0.88
534_Q	562_E	0.688	0.87
188_L	227_R	0.687	0.87
253_C	259_A	0.687	0.87
286_V	330_E	0.686	0.87
36_Y	45_F	0.683	0.87
138_I	159_R	0.683	0.87
161_L	228_T	0.683	0.87
28_D	31_G	0.683	0.87
442_S	446_V	0.682	0.87
148_G	275_P	0.682	0.87
398_T	442_S	0.681	0.87
400_E	405_D	0.681	0.87
159_R	190_E	0.681	0.87
398_T	432_F	0.680	0.87
174_V	177_D	0.680	0.87
291_V	327_Y	0.680	0.87
449_T	453_H	0.679	0.87
51_A	57_L	0.678	0.87
291_V	309_V	0.678	0.87
468_A	475_G	0.678	0.87
252_M	256_I	0.673	0.86
223_I	258_Y	0.671	0.86
35_E	47_L	0.668	0.86
304_F	312_L	0.665	0.86
468_A	477_A	0.664	0.86
493_Y	527_A	0.663	0.85
457_Q	487_A	0.662	0.85
525_R	555_P	0.662	0.85
156_T	275_P	0.661	0.85
42_D	127_A	0.660	0.85
60_E	75_G	0.660	0.85
61_G	64_R	0.660	0.85
137_A	237_L	0.660	0.85
407_M	520_S	0.660	0.85
220_P	241_L	0.659	0.85
405_D	409_L	0.659	0.85
259_A	264_G	0.659	0.85
148_G	274_Y	0.659	0.85
10_E	124_K	0.658	0.85
8_P	43_G	0.658	0.85
516_T	530_E	0.657	0.85
482_V	500_L	0.657	0.85
165_G	228_T	0.656	0.85
307_E	322_P	0.656	0.85
172_T	211_Y	0.655	0.85
516_T	535_P	0.654	0.85
447_L	556_V	0.653	0.85
88_I	169_D	0.651	0.84
292_S	326_G	0.651	0.84
291_V	313_A	0.651	0.84
144_A	275_P	0.650	0.84
52_D	55_D	0.646	0.84
392_L	485_V	0.646	0.84
422_A	476_V	0.644	0.84
81_T	84_P	0.643	0.84
196_T	205_D	0.642	0.84
316_A	351_A	0.641	0.83
511_L	536_A	0.639	0.83
553_E	556_V	0.639	0.83
420_Q	468_A	0.638	0.83
187_V	225_G	0.638	0.83
382_Q	385_V	0.637	0.83
423_T	433_T	0.637	0.83
88_I	163_Y	0.637	0.83
391_D	460_A	0.636	0.83
323_T	328_D	0.636	0.83
65_S	347_D	0.633	0.83
48_E	54_L	0.633	0.83
243_G	272_V	0.632	0.83
292_S	345_V	0.630	0.82
513_T	539_I	0.630	0.82
109_D	232_T	0.630	0.82
34_I	62_I	0.628	0.82
14_L	60_E	0.628	0.82
467_H	477_A	0.627	0.82
456_P	487_A	0.627	0.82
536_A	565_A	0.627	0.82
117_S	133_R	0.626	0.82
220_P	249_I	0.626	0.82
249_I	252_M	0.626	0.82
451_T	553_E	0.623	0.82
90_V	238_F	0.622	0.82
300_L	357_L	0.620	0.81
312_L	316_A	0.619	0.81
276_D	280_H	0.619	0.81
444_A	556_V	0.619	0.81
484_A	499_R	0.618	0.81
375_R	379_S	0.618	0.81
447_L	457_Q	0.618	0.81
511_L	537_G	0.617	0.81
522_I	527_A	0.617	0.81
395_F	432_F	0.616	0.81
541_E	547_I	0.614	0.81
96_D	208_P	0.614	0.81
75_G	80_D	0.613	0.81
49_F	56_R	0.613	0.81
22_D	45_F	0.612	0.81
166_I	169_D	0.612	0.81
424_I	435_L	0.612	0.81
426_E	432_F	0.612	0.81
62_I	65_S	0.611	0.80
177_D	186_D	0.611	0.80
306_T	325_D	0.611	0.80
268_E	271_T	0.611	0.80
293_H	296_I	0.611	0.80
56_R	62_I	0.611	0.80
331_I	339_R	0.610	0.80
462_V	480_R	0.610	0.80
220_P	242_T	0.609	0.80
29_L	34_I	0.608	0.80
164_T	231_T	0.608	0.80
292_S	342_V	0.608	0.80
469_D	475_G	0.608	0.80
494_E	501_Q	0.607	0.80
377_E	381_R	0.607	0.80
169_D	213_D	0.607	0.80
380_V	507_F	0.606	0.80
234_S	237_L	0.605	0.80
78_I	81_T	0.605	0.80
244_T	263_R	0.603	0.80
23_D	39_E	0.600	0.79
435_L	466_A	0.600	0.79
110_L	121_L	0.598	0.79
112_A	136_G	0.598	0.79
14_L	59_V	0.596	0.79
299_L	341_P	0.595	0.79
110_L	135_K	0.595	0.79
407_M	550_H	0.594	0.79
398_T	441_P	0.594	0.79
100_V	173_F	0.590	0.78
493_Y	496_A	0.589	0.78
224_N	242_T	0.588	0.78
102_G	171_D	0.588	0.78
189_T	229_E	0.588	0.78
521_F	540_G	0.586	0.78
502_A	506_E	0.586	0.78
529_I	561_F	0.585	0.78
220_P	240_E	0.585	0.78
33_G	50_E	0.585	0.78
169_D	185_A	0.585	0.78
379_S	383_A	0.584	0.77
482_V	503_L	0.584	0.77
87_A	104_V	0.584	0.77
219_F	248_T	0.584	0.77
374_S	378_R	0.583	0.77
86_W	104_V	0.583	0.77
518_H	528_T	0.582	0.77
243_G	269_D	0.582	0.77
195_E	256_I	0.582	0.77
176_L	209_A	0.582	0.77
30_F	35_E	0.582	0.77
29_L	47_L	0.582	0.77
526_A	538_V	0.581	0.77
379_S	506_E	0.580	0.77
511_L	531_I	0.579	0.77
212_D	217_F	0.579	0.77
34_I	65_S	0.579	0.77
26_R	30_F	0.579	0.77
79_P	83_A	0.579	0.77
285_A	288_T	0.579	0.77
134_A	138_I	0.578	0.77
18_R	24_E	0.576	0.76
141_H	224_N	0.574	0.76
487_A	556_V	0.572	0.76
18_R	72_D	0.572	0.76
137_A	160_S	0.572	0.76
394_N	442_S	0.572	0.76
529_I	539_I	0.570	0.76
406_R	409_L	0.568	0.75
517_T	526_A	0.568	0.75
396_N	466_A	0.567	0.75
527_A	544_P	0.566	0.75
214_I	227_R	0.565	0.75
401_A	549_E	0.564	0.75
302_V	357_L	0.564	0.75
59_V	62_I	0.562	0.75
177_D	205_D	0.560	0.74
424_I	432_F	0.558	0.74
241_L	272_V	0.558	0.74
300_L	345_V	0.558	0.74
265_A	268_E	0.558	0.74
409_L	419_A	0.558	0.74
492_S	495_D	0.558	0.74
440_L	521_F	0.557	0.74
173_F	218_S	0.557	0.74
432_F	445_M	0.554	0.74
125_L	131_R	0.553	0.74
25_L	45_F	0.553	0.74
97_R	134_A	0.552	0.73
17_H	66_L	0.552	0.73
148_G	271_T	0.552	0.73
524_G	543_H	0.551	0.73
15_T	67_R	0.551	0.73
262_A	265_A	0.551	0.73
100_V	158_A	0.549	0.73
541_E	554_V	0.549	0.73
121_L	144_A	0.548	0.73
23_D	26_R	0.548	0.73
11_L	35_E	0.548	0.73
429_S	433_T	0.547	0.73
66_L	70_A	0.547	0.73
160_S	230_V	0.547	0.73
67_R	71_G	0.546	0.73
399_S	431_D	0.545	0.72
389_F	496_A	0.545	0.72
397_M	428_Y	0.544	0.72
409_L	546_V	0.544	0.72
444_A	552_V	0.544	0.72
65_S	68_Y	0.544	0.72
511_L	529_I	0.544	0.72
486_L	495_D	0.543	0.72
142_D	145_M	0.542	0.72
492_S	557_A	0.542	0.72
33_G	49_F	0.541	0.72
141_H	159_R	0.541	0.72
49_F	54_L	0.541	0.72
136_G	140_I	0.540	0.72
486_L	557_A	0.540	0.72
37_E	254_A	0.540	0.72
297_E	304_F	0.539	0.72
48_E	51_A	0.539	0.72
500_L	561_F	0.538	0.72
112_A	117_S	0.538	0.72
185_A	197_Y	0.537	0.71
52_D	57_L	0.536	0.71
404_F	437_T	0.536	0.71
135_K	232_T	0.536	0.71
56_R	397_M	0.536	0.71
5_D	40_T	0.536	0.71
67_R	72_D	0.536	0.71
407_M	444_A	0.535	0.71
218_S	249_I	0.534	0.71
5_D	129_M	0.534	0.71
105_I	108_V	0.534	0.71
163_Y	169_D	0.533	0.71
86_W	163_Y	0.533	0.71
522_I	541_E	0.533	0.71
294_D	324_D	0.532	0.71
189_T	193_T	0.531	0.71
253_C	258_Y	0.531	0.71
447_L	552_V	0.530	0.70
133_R	136_G	0.530	0.70
313_A	348_L	0.530	0.70
79_P	82_N	0.530	0.70
405_D	408_R	0.529	0.70
71_G	314_E	0.529	0.70
175_P	208_P	0.529	0.70
75_G	81_T	0.528	0.70
396_N	435_L	0.527	0.70
78_I	84_P	0.527	0.70
406_R	410_T	0.527	0.70
195_E	219_F	0.526	0.70
88_I	100_V	0.526	0.70
33_G	57_L	0.526	0.70
32_L	66_L	0.525	0.70
58_S	145_M	0.524	0.70
271_T	274_Y	0.523	0.69
518_H	535_P	0.523	0.69
497_K	513_T	0.523	0.69
223_I	229_E	0.523	0.69
17_H	25_L	0.521	0.69
60_E	76_V	0.521	0.69
470_G	475_G	0.521	0.69
427_P	488_R	0.520	0.69
383_A	503_L	0.520	0.69
132_K	223_I	0.520	0.69
319_D	331_I	0.519	0.69
376_L	379_S	0.519	0.69
134_A	137_A	0.519	0.69
97_R	242_T	0.519	0.69
224_N	240_E	0.518	0.69
547_I	556_V	0.518	0.69
99_Y	281_R	0.517	0.69
97_R	173_F	0.517	0.69
159_R	223_I	0.517	0.69
161_L	244_T	0.517	0.69
145_M	156_T	0.517	0.69
22_D	39_E	0.517	0.69
292_S	296_I	0.517	0.69
521_F	539_I	0.516	0.68
83_A	326_G	0.515	0.68
241_L	275_P	0.514	0.68
90_V	100_V	0.513	0.68
494_E	498_A	0.513	0.68
184_P	197_Y	0.513	0.68
80_D	83_A	0.512	0.68
46_K	49_F	0.512	0.68
57_L	495_D	0.512	0.68
29_L	36_Y	0.512	0.68
74_R	78_I	0.512	0.68
34_I	51_A	0.512	0.68
357_L	360_R	0.512	0.68
305_T	311_D	0.511	0.68
6_I	129_M	0.511	0.68
404_F	408_R	0.510	0.68
312_L	315_R	0.509	0.67
11_L	63_A	0.509	0.67
161_L	171_D	0.509	0.67
522_I	525_R	0.508	0.67
190_E	240_E	0.508	0.67
161_L	173_F	0.508	0.67
86_W	106_R	0.507	0.67
174_V	216_L	0.507	0.67
100_V	160_S	0.507	0.67
141_H	225_G	0.507	0.67
192_P	229_E	0.507	0.67
38_G	48_E	0.507	0.67
25_L	29_L	0.506	0.67
509_V	531_I	0.505	0.67
86_W	95_A	0.505	0.67
50_E	265_A	0.505	0.67
105_I	140_I	0.504	0.67
253_C	260_L	0.503	0.66
195_E	261_D	0.503	0.66
206_T	256_I	0.503	0.66
33_G	51_A	0.503	0.66
270_V	284_F	0.503	0.66
99_Y	273_D	0.502	0.66
13_R	143_L	0.502	0.66
515_P	530_E	0.500	0.66
19_S	24_E	0.500	0.66

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2rhqB	2	0.9365	100	0.158	Contact Map
4p72A	2	0.9312	100	0.164	Contact Map
3pcoB	2	0.9383	100	0.167	Contact Map
1b7yB	2	0.9189	100	0.175	Contact Map
3l4gB	2	0.97	100	0.242	Contact Map
2cxiA	3	0.5714	100	0.564	Contact Map
2rhqA	2	0.3827	100	0.707	Contact Map
3icaA	2	0.3369	100	0.737	Contact Map
3ig2A	4	0.3333	100	0.738	Contact Map
4p72C	2	0.3651	100	0.761	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0145 seconds.