Q9HMI3 - HALSA - GREMLIN Contacts

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Q9HMI3 - Dipeptide ABC transporter ATP-binding

UniProt:	Q9HMI3	Sequences: MFKYAIVPYSRMSDDTVSRRGFLKAAGAATVVATSTAGCTDSGGGGDGGGDELVYSRGDHPQNYDPQQTTSGEVSKVTNQIFDTLIQFKPGTSGELTSGLADDWTLDGTTATLTLREDATFHSGADLTATDVKATIRRFIDDEYDYYLGSDRSGYASITFGDWVDSVEATGDYEVTIDLTQQYAPFLRNLAIFAAAILSRDQIESLGADAQPELGTDPVGTGPFEFDQLDNETQRVRLTAFDDYWGGAPSVSAVIFKTTGSNQTRAQGLINGDAHITDNLDAQSIQKVSSADSASVRQKNGINVGYMAFNHDRKPAFRDPLVKRAISMAINRDEIVDSIYQGFAASANQPLPPDVLGHNDDIDSYPHDPQQAESMLADAGVTDLSFELATFSNPRGYNPNPIQTATQVKSDLAEIGVDVEINQFSQFSAYLEYTYDGRHDACLSGWYTDNADPDNFMYVLLHPGTDIDDVPADQNYIAWEDKNNVSNVSAWVDTDYMEFVDKGQRTYDDAARQQYYHQASQIAHDQAPWVYLDYADLIRGVNEAVVAESYTPTSVGGPFLDRVELA	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	566 (486)
Sequences:	22748 (17262)
Seq/√Len:	783.0

ECOLI - OPPA DDPA SAPA DPPA YGIS MPPA GSIB NIKA YEJA YBAE SGRR
BACSU - APPA DPPE OPPA YHJP
HALSA - Q9HMI3 Q9HMW4
SULSO - Q97VF7 Q97VK5 Q97UG7 Q97UH5

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
227_D	239_T	4.133	1.00
170_T	176_T	3.198	1.00
168_E	176_T	3.180	1.00
321_L	378_D	3.093	1.00
371_Q	374_S	3.039	1.00
387_E	418_D	3.038	1.00
117_E	173_Y	2.969	1.00
133_K	137_R	2.898	1.00
498_E	502_K	2.827	1.00
171_G	174_E	2.790	1.00
333_D	337_D	2.720	1.00
225_E	239_T	2.720	1.00
463_P	492_V	2.685	1.00
506_T	511_A	2.629	1.00
387_E	420_E	2.541	1.00
133_K	169_A	2.520	1.00
328_M	371_Q	2.508	1.00
103_D	114_T	2.458	1.00
52_E	253_A	2.451	1.00
374_S	378_D	2.434	1.00
314_K	318_R	2.428	1.00
331_N	334_E	2.401	1.00
389_A	422_N	2.360	1.00
200_R	204_E	2.342	1.00
105_T	114_T	2.330	1.00
110_T	176_T	2.303	1.00
89_K	95_E	2.298	1.00
389_A	420_E	2.293	1.00
326_I	412_L	2.289	1.00
463_P	497_M	2.250	1.00
125_A	201_D	2.240	1.00
168_E	178_D	2.237	1.00
112_T	176_T	2.229	1.00
495_D	498_E	2.214	1.00
127_L	221_T	2.214	1.00
130_T	169_A	2.177	1.00
320_P	324_R	2.160	1.00
237_R	253_A	2.120	1.00
491_W	526_Q	2.111	1.00
120_T	126_D	2.108	1.00
86_I	104_W	2.105	1.00
120_T	243_D	2.099	1.00
122_H	241_F	2.098	1.00
511_A	514_Q	2.097	1.00
321_L	324_R	2.096	1.00
89_K	97_T	2.075	1.00
502_K	515_Y	2.074	1.00
413_A	418_D	2.066	1.00
110_T	178_D	2.052	1.00
321_L	375_M	2.034	1.00
493_D	522_I	1.969	1.00
268_G	273_D	1.962	1.00
83_D	99_G	1.940	1.00
130_T	200_R	1.936	1.00
114_T	174_E	1.924	1.00
493_D	526_Q	1.909	1.00
508_D	511_A	1.905	1.00
514_Q	518_Q	1.888	1.00
52_E	255_I	1.874	1.00
106_L	111_A	1.866	1.00
119_A	127_L	1.847	1.00
165_D	180_T	1.840	1.00
230_D	234_Q	1.831	1.00
102_D	117_E	1.808	1.00
228_Q	237_R	1.793	1.00
56_S	274_A	1.789	1.00
225_E	242_D	1.768	1.00
409_K	413_A	1.754	1.00
320_P	526_Q	1.743	1.00
65_D	138_R	1.741	1.00
136_I	177_I	1.737	1.00
239_T	253_A	1.736	1.00
462_H	501_D	1.734	1.00
496_Y	519_A	1.733	1.00
329_A	415_I	1.729	1.00
309_F	530_V	1.722	1.00
503_G	516_Y	1.717	1.00
499_F	518_Q	1.703	1.00
377_A	382_T	1.700	1.00
54_V	255_I	1.696	1.00
228_Q	235_R	1.694	1.00
132_V	175_V	1.691	1.00
89_K	93_S	1.683	1.00
166_S	178_D	1.677	1.00
128_T	131_D	1.670	1.00
495_D	522_I	1.668	1.00
521_Q	525_D	1.663	1.00
432_E	436_D	1.663	1.00
235_R	255_I	1.655	1.00
51_D	252_S	1.651	1.00
131_D	200_R	1.644	1.00
118_D	126_D	1.640	1.00
102_D	114_T	1.633	1.00
347_A	534_Y	1.632	1.00
227_D	253_A	1.609	1.00
494_T	498_E	1.605	1.00
130_T	172_D	1.599	1.00
230_D	235_R	1.596	1.00
495_D	518_Q	1.592	1.00
315_P	318_R	1.586	1.00
128_T	172_D	1.576	1.00
333_D	346_S	1.568	1.00
426_Q	429_A	1.567	1.00
503_G	515_Y	1.557	1.00
324_R	371_Q	1.556	1.00
102_D	116_R	1.555	1.00
130_T	133_K	1.553	1.00
240_A	252_S	1.552	1.00
123_S	199_S	1.549	1.00
368_D	371_Q	1.540	1.00
433_Y	438_R	1.539	1.00
270_I	287_K	1.534	1.00
125_A	199_S	1.517	1.00
518_Q	521_Q	1.515	1.00
309_F	441_A	1.512	1.00
324_R	527_A	1.487	1.00
330_I	408_V	1.482	1.00
90_P	93_S	1.470	1.00
499_F	515_Y	1.467	1.00
513_Q	517_H	1.457	1.00
313_R	440_D	1.446	1.00
312_D	490_A	1.438	1.00
237_R	255_I	1.437	1.00
402_I	406_T	1.435	1.00
506_T	515_Y	1.434	1.00
515_Y	518_Q	1.433	1.00
259_T	268_G	1.430	1.00
112_T	174_E	1.425	1.00
86_I	113_L	1.415	1.00
286_Q	289_S	1.399	1.00
320_P	525_D	1.397	1.00
129_A	169_A	1.393	1.00
370_Q	373_E	1.385	1.00
83_D	245_W	1.373	1.00
422_N	433_Y	1.368	1.00
327_S	527_A	1.361	1.00
514_Q	517_H	1.358	1.00
224_F	251_V	1.338	1.00
411_D	414_E	1.321	1.00
522_I	526_Q	1.319	1.00
373_E	377_A	1.318	1.00
120_T	241_F	1.307	1.00
492_V	497_M	1.301	1.00
317_F	388_L	1.299	1.00
227_D	237_R	1.298	1.00
83_D	221_T	1.296	1.00
133_K	167_V	1.295	1.00
71_S	74_V	1.288	1.00
511_A	515_Y	1.288	1.00
326_I	417_V	1.287	1.00
54_V	257_K	1.287	1.00
293_S	543_E	1.286	1.00
170_T	174_E	1.278	1.00
502_K	511_A	1.276	1.00
54_V	275_H	1.275	1.00
295_S	543_E	1.273	1.00
336_V	346_S	1.269	1.00
498_E	501_D	1.269	1.00
385_S	418_D	1.268	1.00
104_W	113_L	1.262	1.00
199_S	202_Q	1.255	1.00
126_D	173_Y	1.247	1.00
181_Q	505_R	1.246	1.00
122_H	225_E	1.236	1.00
410_S	414_E	1.236	1.00
499_F	522_I	1.232	1.00
53_L	276_I	1.230	1.00
123_S	201_D	1.229	1.00
114_T	173_Y	1.225	1.00
322_V	376_L	1.223	1.00
392_S	423_Q	1.205	1.00
268_G	274_A	1.204	1.00
510_A	513_Q	1.202	1.00
238_L	256_F	1.202	1.00
392_S	421_I	1.201	1.00
165_D	178_D	1.199	1.00
169_A	172_D	1.198	1.00
502_K	506_T	1.197	1.00
116_R	245_W	1.195	1.00
177_I	186_F	1.195	1.00
235_R	257_K	1.191	1.00
452_D	512_R	1.188	1.00
56_S	265_R	1.187	1.00
353_P	534_Y	1.186	1.00
407_Q	411_D	1.178	1.00
119_A	221_T	1.176	1.00
127_L	197_I	1.175	1.00
137_R	141_D	1.173	1.00
87_Q	99_G	1.171	1.00
390_T	419_V	1.168	1.00
36_T	39_C	1.167	1.00
31_V	34_T	1.165	1.00
98_S	104_W	1.160	1.00
270_I	291_A	1.160	1.00
269_L	540_G	1.159	1.00
375_M	378_D	1.158	1.00
334_E	411_D	1.153	1.00
427_F	431_L	1.149	1.00
336_V	344_A	1.139	1.00
437_G	490_A	1.138	1.00
374_S	377_A	1.137	1.00
298_Q	536_D	1.136	1.00
122_H	243_D	1.132	1.00
297_R	541_V	1.131	1.00
369_P	373_E	1.129	1.00
317_F	326_I	1.127	1.00
87_Q	97_T	1.126	1.00
275_H	544_A	1.123	1.00
111_A	186_F	1.121	1.00
308_A	442_C	1.120	1.00
167_V	175_V	1.119	1.00
495_D	499_F	1.119	1.00
116_R	119_A	1.118	1.00
135_T	197_I	1.117	1.00
412_L	419_V	1.115	1.00
388_L	419_V	1.113	1.00
491_W	496_Y	1.112	1.00
275_H	542_N	1.110	1.00
409_K	421_I	1.105	1.00
522_I	525_D	1.104	1.00
126_D	172_D	1.103	1.00
369_P	415_I	1.098	1.00
340_Y	533_D	1.095	1.00
314_K	440_D	1.095	1.00
320_P	527_A	1.095	1.00
286_Q	290_S	1.095	1.00
510_A	514_Q	1.091	1.00
295_S	541_V	1.088	1.00
32_V	35_S	1.076	1.00
382_T	385_S	1.073	1.00
225_E	241_F	1.069	1.00
201_D	205_S	1.067	1.00
100_L	221_T	1.067	1.00
499_F	519_A	1.066	1.00
107_D	110_T	1.058	1.00
105_T	112_T	1.049	1.00
329_A	412_L	1.048	1.00
113_L	177_I	1.045	1.00
388_L	441_A	1.043	1.00
122_H	219_V	1.041	1.00
50_G	252_S	1.037	1.00
100_L	119_A	1.035	1.00
134_A	200_R	1.035	1.00
359_N	517_H	1.035	1.00
202_Q	219_V	1.031	1.00
409_K	419_V	1.028	1.00
240_A	249_P	1.025	1.00
132_V	197_I	1.024	1.00
501_D	505_R	1.024	1.00
370_Q	374_S	1.019	1.00
102_D	173_Y	1.019	1.00
324_R	375_M	1.015	1.00
410_S	413_A	1.015	1.00
77_V	238_L	1.015	1.00
137_R	140_I	1.013	1.00
345_A	536_D	1.008	1.00
499_F	502_K	1.007	1.00
112_T	170_T	1.004	1.00
186_F	190_L	1.001	1.00
502_K	518_Q	1.000	1.00
408_V	412_L	0.992	1.00
53_L	251_V	0.985	1.00
100_L	132_V	0.978	1.00
337_D	342_G	0.977	1.00
214_L	218_P	0.975	1.00
359_N	521_Q	0.970	1.00
267_Q	270_I	0.963	1.00
130_T	134_A	0.962	1.00
324_R	328_M	0.962	1.00
322_V	379_A	0.958	1.00
491_W	528_P	0.958	1.00
458_Y	504_Q	0.956	1.00
454_D	504_Q	0.955	1.00
264_T	268_G	0.955	1.00
309_F	326_I	0.953	1.00
327_S	332_R	0.953	1.00
371_Q	375_M	0.951	1.00
161_G	164_V	0.948	1.00
334_E	338_S	0.947	1.00
424_F	433_Y	0.947	1.00
239_T	242_D	0.947	1.00
289_S	298_Q	0.946	1.00
274_A	277_T	0.945	1.00
114_T	117_E	0.945	1.00
240_A	248_A	0.944	1.00
131_D	134_A	0.944	1.00
496_Y	523_A	0.940	1.00
111_A	187_L	0.937	1.00
509_D	513_Q	0.935	1.00
335_I	404_T	0.933	1.00
336_V	533_D	0.931	1.00
321_L	379_A	0.930	1.00
503_G	519_A	0.930	1.00
129_A	175_V	0.925	1.00
111_A	179_L	0.922	1.00
403_Q	406_T	0.922	1.00
405_A	421_I	0.920	1.00
129_A	170_T	0.915	1.00
163_W	183_Y	0.912	1.00
183_Y	189_N	0.911	1.00
84_T	99_G	0.909	1.00
121_F	131_D	0.909	1.00
266_A	270_I	0.906	1.00
294_A	540_G	0.905	1.00
386_F	417_V	0.904	1.00
101_A	113_L	0.903	1.00
134_A	203_I	0.903	1.00
345_A	353_P	0.902	1.00
327_S	530_V	0.900	1.00
314_K	317_F	0.898	1.00
496_Y	500_V	0.898	1.00
83_D	244_Y	0.890	1.00
324_R	525_D	0.890	1.00
179_L	186_F	0.889	1.00
369_P	414_E	0.888	1.00
53_L	545_V	0.887	1.00
86_I	96_L	0.885	1.00
429_A	433_Y	0.884	1.00
117_E	126_D	0.884	1.00
284_S	287_K	0.883	1.00
392_S	405_A	0.883	1.00
114_T	171_G	0.881	1.00
60_H	229_L	0.880	1.00
269_L	294_A	0.880	1.00
391_F	433_Y	0.878	1.00
434_T	442_C	0.877	1.00
86_I	187_L	0.874	1.00
122_H	220_G	0.874	1.00
496_Y	522_I	0.873	1.00
81_I	238_L	0.866	1.00
340_Y	344_A	0.866	1.00
288_V	294_A	0.864	1.00
39_C	42_S	0.863	1.00
224_F	249_P	0.862	1.00
108_G	112_T	0.861	1.00
185_P	452_D	0.858	1.00
331_N	411_D	0.857	1.00
367_H	414_E	0.856	1.00
383_D	386_F	0.855	1.00
502_K	505_R	0.853	1.00
286_Q	341_Q	0.852	1.00
389_A	440_D	0.851	1.00
454_D	458_Y	0.849	1.00
49_G	250_S	0.849	1.00
229_L	236_V	0.848	1.00
517_H	521_Q	0.846	1.00
266_A	288_V	0.844	1.00
123_S	219_V	0.843	1.00
122_H	226_F	0.842	1.00
308_A	489_S	0.839	1.00
163_W	181_Q	0.834	1.00
332_R	346_S	0.830	1.00
372_A	415_I	0.825	1.00
303_N	447_Y	0.824	1.00
391_F	422_N	0.824	1.00
281_D	284_S	0.822	1.00
319_D	381_V	0.820	1.00
519_A	522_I	0.820	1.00
109_T	178_D	0.818	1.00
391_F	424_F	0.815	1.00
500_V	519_A	0.815	1.00
84_T	196_A	0.814	1.00
259_T	274_A	0.811	1.00
80_Q	238_L	0.810	1.00
169_A	175_V	0.809	1.00
133_K	175_V	0.808	1.00
381_V	384_L	0.804	1.00
398_N	401_P	0.803	1.00
322_V	381_V	0.803	1.00
328_M	375_M	0.801	1.00
86_I	101_A	0.798	1.00
462_H	500_V	0.798	1.00
458_Y	462_H	0.795	1.00
137_R	167_V	0.794	1.00
119_A	245_W	0.792	1.00
269_L	277_T	0.789	1.00
328_M	367_H	0.788	1.00
82_F	220_G	0.787	1.00
34_T	37_A	0.785	1.00
454_D	516_Y	0.783	1.00
307_M	408_V	0.782	1.00
60_H	258_T	0.782	1.00
265_R	277_T	0.778	1.00
33_A	36_T	0.776	1.00
518_Q	522_I	0.773	1.00
119_A	173_Y	0.772	1.00
267_Q	271_N	0.772	1.00
325_A	376_L	0.771	1.00
240_A	251_V	0.769	1.00
55_Y	276_I	0.769	1.00
39_C	43_G	0.767	1.00
81_I	226_F	0.764	1.00
402_I	423_Q	0.764	1.00
32_V	36_T	0.762	1.00
109_T	181_Q	0.761	1.00
350_P	531_Y	0.758	1.00
67_Q	138_R	0.756	1.00
242_D	252_S	0.756	1.00
201_D	204_E	0.756	1.00
331_N	367_H	0.754	1.00
113_L	187_L	0.754	1.00
381_V	386_F	0.753	1.00
48_G	51_D	0.752	1.00
298_Q	538_I	0.752	1.00
375_M	379_A	0.749	1.00
285_I	289_S	0.746	1.00
51_D	251_V	0.745	1.00
382_T	386_F	0.744	1.00
349_Q	520_S	0.744	1.00
319_D	379_A	0.743	1.00
298_Q	343_F	0.743	1.00
494_T	497_M	0.742	1.00
397_Y	402_I	0.742	1.00
100_L	127_L	0.741	1.00
99_G	245_W	0.739	1.00
329_A	369_P	0.737	1.00
390_T	405_A	0.737	1.00
312_D	437_G	0.736	1.00
359_N	362_I	0.736	1.00
213_E	217_D	0.735	1.00
429_A	432_E	0.734	1.00
313_R	318_R	0.734	1.00
461_L	529_W	0.732	1.00
300_N	536_D	0.731	1.00
141_D	144_Y	0.726	1.00
85_L	101_A	0.726	1.00
238_L	254_V	0.725	1.00
311_H	528_P	0.725	1.00
131_D	135_T	0.724	1.00
330_I	335_I	0.723	1.00
66_P	198_L	0.723	1.00
291_A	294_A	0.721	1.00
307_M	441_A	0.720	1.00
129_A	133_K	0.719	1.00
90_P	549_S	0.718	1.00
135_T	198_L	0.717	1.00
406_T	421_I	0.717	1.00
257_K	268_G	0.717	1.00
277_T	280_L	0.712	1.00
202_Q	206_L	0.712	1.00
330_I	412_L	0.712	1.00
109_T	165_D	0.711	1.00
461_L	523_A	0.709	1.00
335_I	407_Q	0.707	1.00
487_N	490_A	0.706	1.00
226_F	236_V	0.706	1.00
163_W	180_T	0.704	1.00
213_E	216_T	0.704	1.00
317_F	322_V	0.702	1.00
35_S	38_G	0.701	1.00
53_L	254_V	0.700	1.00
491_W	522_I	0.699	1.00
214_L	217_D	0.698	1.00
413_A	419_V	0.697	1.00
376_L	381_V	0.697	1.00
328_M	366_P	0.695	1.00
406_T	409_K	0.693	1.00
391_F	439_H	0.690	1.00
113_L	190_L	0.690	1.00
462_H	465_T	0.690	1.00
67_Q	139_F	0.689	1.00
29_A	33_A	0.689	1.00
239_T	252_S	0.689	1.00
288_V	540_G	0.689	1.00
81_I	220_G	0.688	1.00
413_A	417_V	0.687	1.00
412_L	441_A	0.685	1.00
424_F	429_A	0.683	1.00
28_A	34_T	0.683	1.00
60_H	231_N	0.681	1.00
305_G	401_P	0.681	1.00
184_A	512_R	0.680	1.00
309_F	317_F	0.679	1.00
326_I	530_V	0.679	1.00
356_L	509_D	0.678	1.00
462_H	497_M	0.677	1.00
28_A	31_V	0.677	1.00
167_V	177_I	0.677	1.00
512_R	516_Y	0.676	1.00
293_S	542_N	0.675	1.00
406_T	410_S	0.675	1.00
328_M	365_Y	0.675	1.00
326_I	441_A	0.675	1.00
115_L	127_L	0.672	1.00
541_V	548_E	0.672	1.00
259_T	265_R	0.671	1.00
225_E	243_D	0.670	1.00
134_A	204_E	0.669	1.00
230_D	233_T	0.669	1.00
128_T	173_Y	0.668	1.00
37_A	40_T	0.668	1.00
77_V	236_V	0.668	1.00
69_T	78_T	0.667	1.00
121_F	197_I	0.667	1.00
226_F	229_L	0.667	1.00
361_D	517_H	0.666	1.00
164_V	167_V	0.665	1.00
80_Q	254_V	0.665	1.00
246_G	249_P	0.665	1.00
82_F	218_P	0.665	1.00
381_V	385_S	0.664	1.00
56_S	259_T	0.660	1.00
322_V	386_F	0.659	1.00
501_D	504_Q	0.659	1.00
51_D	250_S	0.655	1.00
38_G	41_D	0.654	1.00
497_M	501_D	0.653	1.00
542_N	545_V	0.651	1.00
319_D	380_G	0.651	1.00
311_H	489_S	0.649	1.00
355_V	358_H	0.648	1.00
376_L	415_I	0.647	1.00
343_F	538_I	0.647	1.00
199_S	219_V	0.646	1.00
392_S	402_I	0.646	1.00
140_I	180_T	0.645	1.00
106_L	187_L	0.645	1.00
109_T	182_Q	0.645	1.00
357_G	513_Q	0.642	1.00
326_I	388_L	0.642	1.00
121_F	220_G	0.641	1.00
133_K	168_E	0.639	1.00
261_S	264_T	0.639	1.00
136_I	190_L	0.638	1.00
88_F	96_L	0.637	1.00
169_A	176_T	0.636	1.00
36_T	40_T	0.634	1.00
127_L	173_Y	0.633	1.00
62_Q	71_S	0.633	1.00
121_F	127_L	0.632	1.00
304_V	347_A	0.632	1.00
430_Y	442_C	0.631	1.00
50_G	250_S	0.631	1.00
393_N	401_P	0.631	1.00
412_L	417_V	0.630	1.00
276_I	545_V	0.627	1.00
312_D	318_R	0.627	1.00
236_V	258_T	0.626	1.00
399_P	403_Q	0.626	1.00
108_G	507_Y	0.625	1.00
118_D	173_Y	0.624	1.00
359_N	520_S	0.624	1.00
390_T	443_L	0.624	1.00
104_W	187_L	0.624	1.00
29_A	32_V	0.624	1.00
412_L	415_I	0.624	1.00
216_T	231_N	0.623	1.00
295_S	546_V	0.622	1.00
142_D	145_D	0.622	1.00
31_V	35_S	0.622	1.00
376_L	379_A	0.622	1.00
399_P	402_I	0.621	1.00
376_L	386_F	0.621	1.00
528_P	531_Y	0.621	1.00
329_A	367_H	0.620	1.00
44_G	47_D	0.619	1.00
134_A	138_R	0.619	1.00
82_F	221_T	0.616	1.00
319_D	322_V	0.615	1.00
75_S	193_F	0.613	1.00
96_L	187_L	0.612	1.00
269_L	542_N	0.612	1.00
335_I	408_V	0.611	1.00
125_A	131_D	0.611	1.00
69_T	74_V	0.610	1.00
496_Y	499_F	0.609	1.00
129_A	173_Y	0.609	1.00
333_D	336_V	0.609	1.00
88_F	191_A	0.608	1.00
393_N	398_N	0.607	1.00
515_Y	519_A	0.607	1.00
234_Q	257_K	0.607	1.00
34_T	39_C	0.606	1.00
404_T	408_V	0.605	1.00
509_D	512_R	0.605	1.00
247_G	250_S	0.605	1.00
115_L	173_Y	0.604	1.00
113_L	175_V	0.604	1.00
373_E	415_I	0.600	1.00
464_G	501_D	0.599	1.00
35_S	39_C	0.599	1.00
137_R	166_S	0.599	1.00
224_F	240_A	0.598	1.00
251_V	545_V	0.597	1.00
361_D	521_Q	0.597	1.00
121_F	201_D	0.595	1.00
457_M	519_A	0.592	1.00
262_N	265_R	0.592	1.00
330_I	530_V	0.590	1.00
121_F	221_T	0.589	1.00
404_T	533_D	0.588	1.00
266_A	284_S	0.588	1.00
137_R	200_R	0.587	1.00
311_H	318_R	0.586	1.00
336_V	340_Y	0.585	1.00
206_L	217_D	0.584	1.00
458_Y	501_D	0.583	1.00
240_A	247_G	0.582	1.00
128_T	200_R	0.580	1.00
242_D	248_A	0.580	1.00
115_L	119_A	0.580	1.00
84_T	221_T	0.580	1.00
62_Q	74_V	0.579	1.00
30_T	33_A	0.578	1.00
424_F	430_Y	0.577	1.00
241_F	244_Y	0.577	1.00
367_H	411_D	0.576	1.00
408_V	419_V	0.575	1.00
306_Y	529_W	0.574	1.00
381_V	417_V	0.574	1.00
26_A	29_A	0.573	1.00
127_L	135_T	0.573	1.00
269_L	274_A	0.573	1.00
364_S	524_H	0.573	1.00
292_D	543_E	0.572	1.00
361_D	364_S	0.570	1.00
129_A	171_G	0.570	1.00
43_G	46_G	0.569	1.00
27_G	30_T	0.568	1.00
212_P	218_P	0.566	1.00
356_L	513_Q	0.566	1.00
280_L	540_G	0.564	1.00
98_S	103_D	0.564	1.00
328_M	372_A	0.563	1.00
263_Q	284_S	0.563	1.00
322_V	380_G	0.562	1.00
393_N	430_Y	0.561	1.00
376_L	417_V	0.561	1.00
272_G	542_N	0.561	1.00
493_D	496_Y	0.559	1.00
330_I	532_L	0.557	1.00
446_W	460_L	0.557	1.00
285_I	296_V	0.556	1.00
64_Y	236_V	0.556	1.00
39_C	45_G	0.555	1.00
37_A	41_D	0.555	1.00
369_P	376_L	0.554	1.00
257_K	273_D	0.554	1.00
52_E	237_R	0.553	1.00
102_D	105_T	0.553	1.00
106_L	109_T	0.552	1.00
110_T	168_E	0.552	1.00
137_R	169_A	0.551	1.00
339_I	407_Q	0.551	1.00
30_T	34_T	0.550	1.00
309_F	327_S	0.549	1.00
503_G	512_R	0.549	1.00
224_F	253_A	0.549	1.00
276_I	541_V	0.548	1.00
218_P	226_F	0.547	1.00
64_Y	229_L	0.546	1.00
507_Y	511_A	0.546	1.00
305_G	535_A	0.546	1.00
368_D	374_S	0.546	1.00
263_Q	267_Q	0.546	1.00
71_S	427_F	0.545	1.00
327_S	365_Y	0.544	1.00
362_I	365_Y	0.544	1.00
164_V	177_I	0.544	1.00
226_F	238_L	0.544	1.00
87_Q	246_G	0.543	1.00
57_R	256_F	0.543	1.00
305_G	404_T	0.543	1.00
300_N	345_A	0.543	1.00
181_Q	501_D	0.540	1.00
411_D	415_I	0.539	1.00
42_S	45_G	0.539	1.00
419_V	441_A	0.538	1.00
295_S	542_N	0.538	1.00
527_A	530_V	0.537	1.00
80_Q	256_F	0.534	1.00
82_F	214_L	0.534	1.00
307_M	390_T	0.534	1.00
333_D	366_P	0.533	1.00
54_V	274_A	0.531	1.00
115_L	129_A	0.530	1.00
307_M	530_V	0.530	1.00
427_F	444_S	0.530	1.00
306_Y	444_S	0.529	1.00
363_D	366_P	0.528	1.00
33_A	37_A	0.528	1.00
289_S	343_F	0.528	1.00
328_M	368_D	0.526	1.00
104_W	114_T	0.524	1.00
343_F	346_S	0.523	1.00
322_V	326_I	0.522	1.00
86_I	191_A	0.522	1.00
525_D	528_P	0.522	1.00
268_G	271_N	0.522	1.00
405_A	443_L	0.520	1.00
50_G	253_A	0.518	1.00
487_N	491_W	0.518	1.00
121_F	128_T	0.518	1.00
28_A	32_V	0.518	1.00
123_S	202_Q	0.517	1.00
371_Q	378_D	0.517	1.00
506_T	512_R	0.516	1.00
499_F	503_G	0.515	1.00
126_D	131_D	0.515	1.00
343_F	536_D	0.514	1.00
334_E	407_Q	0.513	1.00
519_A	523_A	0.512	1.00
312_D	492_V	0.512	1.00
431_L	435_Y	0.512	1.00
85_L	132_V	0.512	1.00
353_P	360_D	0.512	1.00
539_R	548_E	0.511	1.00
127_L	131_D	0.511	1.00
129_A	172_D	0.511	1.00
285_I	538_I	0.510	1.00
81_I	218_P	0.510	1.00
520_S	524_H	0.510	1.00
63_N	215_G	0.510	1.00
495_D	525_D	0.508	1.00
139_F	194_A	0.508	1.00
83_D	246_G	0.508	1.00
506_T	509_D	0.506	1.00
307_M	532_L	0.506	1.00
317_F	321_L	0.505	1.00
122_H	221_T	0.505	1.00
134_A	198_L	0.505	1.00
541_V	545_V	0.505	1.00
78_T	81_I	0.504	1.00
432_E	435_Y	0.503	1.00
134_A	201_D	0.503	1.00
125_A	200_R	0.501	1.00
379_A	382_T	0.501	1.00
430_Y	434_T	0.501	1.00
348_N	364_S	0.500	1.00

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4qflA	1	0.871	100	0.193	Contact Map
4wedA	1	0.8198	100	0.214	Contact Map
4fajA	1	0.8516	100	0.216	Contact Map
3zs6A	1	0.864	100	0.216	Contact Map
4tozA	1	0.8781	100	0.223	Contact Map
3m8uA	1	0.8728	100	0.224	Contact Map
1xocA	2	0.8534	100	0.225	Contact Map
1dpeA	1	0.871	100	0.227	Contact Map
3tpaA	1	0.871	100	0.228	Contact Map
4gl8A	1	0.8534	100	0.23	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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