Q9HMF2 - HALSA - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

Q9HMF2 - Halolysin

UniProt:	Q9HMF2	Sequences: MADNTNVTRRSFLTATGAAAGSVALVGVSAGESDDPWNSDRSEYIVGVSNVEDDPQQHVEQYLQGQEQVGSVQERLNTAVVGLPADAPESVRKQFVDRLESRDTIKYVEQNVELQAQLVPNDPRFGDQYADQQVNAPEAWDTTTGDAGVTIGVVDQGVKYDHPDLDGNIDRSVSNGGRDFVDDDGDPYPDSLNEEIHGTHVAGIAAAEVNNGNGVTGIGNSSVIAGRALSERGSGSTADIADAITWAANEGADVINLSLGGGGYTNTMQNAVTYAANQGALVVAAAGNDGSGSVSYPAAYGGVLAVSALDPDESLASYSNYGPKIDLAAPGTNVLSTWTADDYESISGTSMATPVVAGVAGLTLAQWELSNAELRNHLKATAVDIGLSDRQQGAGRVDAANAVNTDPGSGGGGGGGGGGDSTSSSVSGSLRGRGDSNCWSFSYEYSNPSQVVIELDGPGNADFDLYANTSTNACPTTSSYEFRSWTTGSQESITIDNPDTSVDLNVLAYAYSGRGDLTVTVTEYK	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	525 (458)
Sequences:	5865 (4559)
Seq/√Len:	213.0

BACSU - SUBE SUBF SUBV WPRA SUBT APRX ISP1
HALSA - Q9HMF2 Q9HNT7

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
308_A	316_A	5.172	1.00
151_I	205_A	4.930	1.00
307_S	328_A	4.522	1.00
111_N	238_A	4.379	1.00
229_L	235_G	4.240	1.00
359_V	399_A	4.206	1.00
285_A	353_T	4.121	1.00
359_V	397_V	3.811	1.00
200_H	351_M	3.792	1.00
338_W	344_E	3.673	1.00
145_G	220_N	3.579	1.00
383_V	398_D	3.458	1.00
281_L	304_L	3.385	1.00
308_A	318_Y	3.119	1.00
154_V	228_A	3.021	1.00
316_A	332_T	2.989	1.00
298_A	305_A	2.948	1.00
147_A	220_N	2.937	1.00
338_W	346_I	2.779	1.00
117_Q	285_A	2.765	1.00
152_G	252_A	2.645	1.00
318_Y	332_T	2.625	1.00
203_G	336_S	2.613	1.00
313_E	396_R	2.597	1.00
153_V	205_A	2.592	1.00
193_N	196_I	2.566	1.00
256_N	353_T	2.409	1.00
202_A	225_A	2.388	1.00
356_V	397_V	2.364	1.00
207_A	337_T	2.330	1.00
381_T	402_A	2.307	1.00
353_T	357_A	2.296	1.00
170_D	174_S	2.277	1.00
308_A	332_T	2.272	1.00
327_L	397_V	2.223	1.00
114_L	237_T	2.211	1.00
370_S	373_E	2.211	1.00
200_H	336_S	2.187	1.00
281_L	360_A	2.134	1.00
285_A	352_A	2.130	1.00
248_A	280_A	2.128	1.00
206_A	221_S	2.096	1.00
203_G	337_T	2.057	1.00
185_G	188_Y	2.018	1.00
92_R	95_F	1.997	1.00
224_I	252_A	1.997	1.00
204_I	355_V	1.984	1.00
315_L	328_A	1.979	1.00
366_Q	369_L	1.954	1.00
398_D	401_N	1.934	1.00
417_G	420_D	1.927	1.00
228_A	259_L	1.917	1.00
43_E	111_N	1.872	1.00
204_I	351_M	1.870	1.00
284_A	303_V	1.867	1.00
240_I	259_L	1.838	1.00
369_L	377_H	1.830	1.00
200_H	204_I	1.823	1.00
150_T	222_S	1.817	1.00
364_L	374_L	1.813	1.00
256_N	357_A	1.806	1.00
226_G	243_A	1.781	1.00
151_I	361_G	1.777	1.00
201_V	256_N	1.777	1.00
310_D	332_T	1.769	1.00
400_A	404_N	1.765	1.00
327_L	378_L	1.730	1.00
154_V	243_A	1.728	1.00
170_D	175_N	1.717	1.00
335_L	345_S	1.715	1.00
375_R	379_K	1.714	1.00
158_V	223_V	1.699	1.00
273_T	302_G	1.689	1.00
135_N	398_D	1.667	1.00
359_V	378_L	1.654	1.00
151_I	221_S	1.652	1.00
336_S	351_M	1.644	1.00
139_A	403_V	1.639	1.00
206_A	223_V	1.632	1.00
309_L	328_A	1.628	1.00
149_V	364_L	1.604	1.00
218_I	358_G	1.603	1.00
283_V	353_T	1.601	1.00
244_I	275_A	1.600	1.00
228_A	243_A	1.599	1.00
376_N	380_A	1.577	1.00
330_P	334_V	1.554	1.00
174_S	177_G	1.553	1.00
266_N	270_N	1.553	1.00
254_V	281_L	1.538	1.00
248_A	275_A	1.532	1.00
307_S	325_I	1.524	1.00
47_G	106_K	1.523	1.00
179_D	184_D	1.517	1.00
116_A	229_L	1.510	1.00
124_R	127_D	1.504	1.00
428_G	432_G	1.497	1.00
417_G	421_S	1.491	1.00
236_S	239_D	1.487	1.00
150_T	224_I	1.467	1.00
153_V	201_V	1.462	1.00
244_I	257_L	1.457	1.00
315_L	319_S	1.453	1.00
363_T	402_A	1.446	1.00
275_A	282_V	1.435	1.00
177_G	180_F	1.423	1.00
200_H	346_I	1.408	1.00
152_G	247_A	1.407	1.00
283_V	357_A	1.404	1.00
360_A	374_L	1.392	1.00
144_T	365_A	1.389	1.00
306_V	327_L	1.386	1.00
283_V	356_V	1.380	1.00
180_F	183_D	1.373	1.00
346_I	351_M	1.358	1.00
226_G	246_W	1.353	1.00
253_D	364_L	1.352	1.00
184_D	187_P	1.344	1.00
273_T	301_G	1.331	1.00
417_G	422_T	1.330	1.00
416_G	420_D	1.330	1.00
272_V	303_V	1.329	1.00
194_E	231_E	1.310	1.00
148_G	222_S	1.306	1.00
149_V	361_G	1.302	1.00
159_K	339_T	1.279	1.00
153_V	202_A	1.270	1.00
255_I	275_A	1.270	1.00
309_L	396_R	1.266	1.00
363_T	369_L	1.264	1.00
176_G	180_F	1.263	1.00
179_D	182_D	1.260	1.00
219_G	361_G	1.257	1.00
174_S	178_R	1.257	1.00
281_L	371_N	1.253	1.00
360_A	363_T	1.250	1.00
363_T	374_L	1.243	1.00
451_V	455_L	1.239	1.00
418_G	421_S	1.237	1.00
49_S	106_K	1.233	1.00
456_D	459_G	1.227	1.00
165_L	337_T	1.221	1.00
112_V	237_T	1.220	1.00
164_D	337_T	1.219	1.00
291_S	321_Y	1.219	1.00
146_D	219_G	1.216	1.00
451_V	454_E	1.204	1.00
158_V	225_A	1.202	1.00
318_Y	347_S	1.194	1.00
379_K	394_A	1.191	1.00
468_N	501_S	1.190	1.00
109_E	267_T	1.186	1.00
455_L	459_G	1.185	1.00
109_E	265_T	1.184	1.00
105_I	108_V	1.168	1.00
134_V	218_I	1.159	1.00
179_D	187_P	1.152	1.00
156_Q	195_E	1.151	1.00
96_V	100_E	1.151	1.00
152_G	224_I	1.149	1.00
286_A	305_A	1.147	1.00
99_L	105_I	1.136	1.00
142_T	400_A	1.131	1.00
158_V	165_L	1.127	1.00
258_S	354_P	1.124	1.00
218_I	355_V	1.121	1.00
76_L	84_P	1.118	1.00
281_L	374_L	1.117	1.00
49_S	104_T	1.107	1.00
168_N	208_E	1.107	1.00
161_D	192_L	1.103	1.00
290_G	320_N	1.097	1.00
383_V	396_R	1.096	1.00
329_A	356_V	1.091	1.00
315_L	391_Q	1.086	1.00
300_Y	303_V	1.086	1.00
156_Q	193_N	1.082	1.00
451_V	463_F	1.080	1.00
226_G	250_E	1.078	1.00
266_N	269_Q	1.077	1.00
181_V	184_D	1.077	1.00
241_A	271_A	1.075	1.00
241_A	267_T	1.070	1.00
96_V	108_V	1.069	1.00
213_N	218_I	1.068	1.00
247_A	255_I	1.066	1.00
145_G	365_A	1.059	1.00
76_L	82_G	1.057	1.00
426_V	432_G	1.055	1.00
190_D	193_N	1.049	1.00
116_A	156_Q	1.047	1.00
426_V	430_L	1.045	1.00
421_S	427_S	1.042	1.00
306_V	356_V	1.040	1.00
418_G	422_T	1.040	1.00
180_F	185_G	1.038	1.00
381_T	405_T	1.037	1.00
205_A	358_G	1.030	1.00
273_T	277_N	1.027	1.00
182_D	185_G	1.027	1.00
201_V	354_P	1.026	1.00
256_N	283_V	1.020	1.00
240_I	257_L	1.016	1.00
269_Q	273_T	1.015	1.00
270_N	274_Y	1.014	1.00
133_Q	313_E	1.012	1.00
202_A	223_V	1.007	1.00
111_N	114_L	1.001	1.00
52_E	56_Q	1.000	1.00
196_I	346_I	0.996	1.00
445_Y	448_P	0.989	1.00
47_G	107_Y	0.987	1.00
159_K	342_D	0.986	1.00
382_A	395_G	0.984	1.00
271_A	275_A	0.980	1.00
321_Y	391_Q	0.979	1.00
369_L	373_E	0.978	1.00
364_L	369_L	0.974	1.00
74_E	242_D	0.970	1.00
113_E	236_S	0.966	1.00
498_P	502_V	0.964	1.00
496_D	500_T	0.964	1.00
283_V	360_A	0.963	1.00
308_A	347_S	0.963	1.00
117_Q	260_G	0.960	1.00
315_L	321_Y	0.958	1.00
179_D	183_D	0.957	1.00
148_G	219_G	0.953	1.00
207_A	215_V	0.952	1.00
215_V	218_I	0.952	1.00
254_V	357_A	0.949	1.00
475_P	478_S	0.948	1.00
493_I	498_P	0.948	1.00
439_W	443_Y	0.947	1.00
276_A	281_L	0.945	1.00
48_V	83_L	0.944	1.00
286_A	307_S	0.944	1.00
455_L	458_P	0.943	0.99
97_D	100_E	0.940	0.99
273_T	300_Y	0.938	0.99
170_D	176_G	0.935	0.99
213_N	216_T	0.934	0.99
309_L	313_E	0.934	0.99
143_T	146_D	0.930	0.99
328_A	352_A	0.928	0.99
175_N	178_R	0.927	0.99
159_K	192_L	0.927	0.99
184_D	188_Y	0.927	0.99
154_V	257_L	0.926	0.99
183_D	186_D	0.925	0.99
364_L	367_W	0.923	0.99
244_I	272_V	0.920	0.99
269_Q	300_Y	0.919	0.99
257_L	284_A	0.917	0.99
254_V	360_A	0.915	0.99
289_D	320_N	0.915	0.99
139_A	142_T	0.912	0.99
142_T	404_N	0.908	0.99
487_T	491_E	0.907	0.99
304_L	375_R	0.907	0.99
332_T	347_S	0.905	0.99
98_R	101_S	0.905	0.99
491_E	496_D	0.900	0.99
366_Q	377_H	0.900	0.99
274_Y	277_N	0.898	0.99
214_G	218_I	0.898	0.99
180_F	187_P	0.887	0.99
422_T	427_S	0.886	0.99
362_L	399_A	0.883	0.99
176_G	179_D	0.881	0.99
372_A	376_N	0.880	0.99
255_I	282_V	0.879	0.99
178_R	182_D	0.876	0.99
491_E	498_P	0.873	0.99
443_Y	446_S	0.872	0.99
451_V	457_G	0.871	0.99
245_T	249_N	0.870	0.99
245_T	274_Y	0.869	0.99
489_S	493_I	0.869	0.99
284_A	298_A	0.866	0.99
180_F	184_D	0.866	0.99
327_L	356_V	0.866	0.99
498_P	501_S	0.865	0.99
174_S	188_Y	0.864	0.99
218_I	359_V	0.861	0.99
136_A	140_W	0.857	0.99
229_L	239_D	0.857	0.99
248_A	274_Y	0.855	0.99
125_F	128_Q	0.852	0.99
488_G	491_E	0.851	0.99
162_H	343_Y	0.850	0.99
244_I	271_A	0.849	0.99
247_A	252_A	0.849	0.99
44_Y	48_V	0.848	0.99
182_D	187_P	0.847	0.99
356_V	378_L	0.846	0.99
134_V	355_V	0.842	0.99
53_D	56_Q	0.839	0.99
267_T	270_N	0.838	0.99
466_Y	501_S	0.837	0.99
493_I	500_T	0.837	0.99
183_D	187_P	0.837	0.99
165_L	169_I	0.830	0.99
502_V	505_N	0.830	0.99
276_A	375_R	0.830	0.99
196_I	338_W	0.829	0.99
477_T	480_Y	0.829	0.99
67_E	70_G	0.828	0.99
181_V	186_D	0.828	0.99
167_G	208_E	0.827	0.99
164_D	209_V	0.827	0.99
333_N	347_S	0.826	0.99
259_L	284_A	0.825	0.99
290_G	315_L	0.825	0.99
492_S	496_D	0.824	0.99
326_D	329_A	0.823	0.99
138_E	141_D	0.820	0.99
133_Q	309_L	0.820	0.99
493_I	496_D	0.818	0.99
174_S	181_V	0.814	0.99
458_P	461_A	0.813	0.99
493_I	497_N	0.813	0.99
381_T	401_N	0.813	0.99
296_Y	299_A	0.812	0.98
178_R	181_V	0.812	0.98
451_V	458_P	0.811	0.98
65_G	69_V	0.807	0.98
72_V	75_R	0.807	0.98
429_S	432_G	0.806	0.98
422_T	426_V	0.806	0.98
244_I	255_I	0.806	0.98
377_H	406_D	0.801	0.98
176_G	224_I	0.800	0.98
316_A	347_S	0.799	0.98
60_E	64_Q	0.799	0.98
164_D	343_Y	0.798	0.98
140_W	216_T	0.798	0.98
56_Q	59_V	0.797	0.98
174_S	186_D	0.796	0.98
135_N	400_A	0.795	0.98
497_N	500_T	0.794	0.98
490_Q	493_I	0.794	0.98
178_R	187_P	0.794	0.98
179_D	185_G	0.792	0.98
170_D	177_G	0.790	0.98
439_W	445_Y	0.786	0.98
360_A	378_L	0.785	0.98
478_S	482_F	0.783	0.98
246_W	249_N	0.782	0.98
494_T	498_P	0.780	0.98
181_V	185_G	0.779	0.98
197_H	288_N	0.779	0.98
182_D	186_D	0.778	0.98
257_L	282_V	0.778	0.98
286_A	325_I	0.778	0.98
246_W	250_E	0.778	0.98
351_M	354_P	0.777	0.98
176_G	187_P	0.776	0.98
419_G	422_T	0.775	0.98
226_G	247_A	0.775	0.98
469_T	473_A	0.773	0.98
426_V	429_S	0.771	0.98
153_V	225_A	0.771	0.98
209_V	216_T	0.769	0.98
295_S	320_N	0.769	0.98
179_D	227_R	0.762	0.98
351_M	355_V	0.762	0.98
423_S	426_V	0.760	0.98
175_N	180_F	0.759	0.98
476_T	480_Y	0.758	0.98
170_D	224_I	0.755	0.98
79_A	82_G	0.755	0.98
399_A	403_V	0.755	0.98
53_D	57_Q	0.754	0.98
229_L	259_L	0.754	0.98
325_I	328_A	0.753	0.98
165_L	203_G	0.753	0.98
326_D	331_G	0.752	0.98
494_T	497_N	0.751	0.97
310_D	314_S	0.747	0.97
135_N	138_E	0.746	0.97
111_N	236_S	0.745	0.97
377_H	405_T	0.744	0.97
122_D	125_F	0.744	0.97
74_E	84_P	0.743	0.97
200_H	334_V	0.741	0.97
160_Y	169_I	0.741	0.97
330_P	355_V	0.740	0.97
180_F	246_W	0.739	0.97
140_W	362_L	0.736	0.97
421_S	426_V	0.735	0.97
276_A	282_V	0.732	0.97
176_G	182_D	0.731	0.97
491_E	501_S	0.731	0.97
175_N	179_D	0.729	0.97
488_G	496_D	0.727	0.97
237_T	268_M	0.727	0.97
178_R	185_G	0.724	0.97
228_A	257_L	0.723	0.97
227_R	231_E	0.721	0.97
255_I	280_A	0.721	0.97
281_L	364_L	0.719	0.97
146_D	221_S	0.716	0.97
416_G	419_G	0.716	0.97
326_D	330_P	0.716	0.97
76_L	80_V	0.715	0.97
204_I	336_S	0.715	0.97
51_V	54_D	0.715	0.97
498_P	504_L	0.714	0.97
420_D	430_L	0.712	0.97
454_E	457_G	0.711	0.97
43_E	46_V	0.711	0.97
441_F	445_Y	0.707	0.96
44_Y	108_V	0.707	0.96
420_D	423_S	0.707	0.96
400_A	403_V	0.706	0.96
138_E	142_T	0.705	0.96
438_C	443_Y	0.704	0.96
502_V	506_V	0.704	0.96
422_T	425_S	0.704	0.96
170_D	222_S	0.704	0.96
95_F	98_R	0.703	0.96
300_Y	305_A	0.701	0.96
461_A	469_T	0.701	0.96
423_S	432_G	0.700	0.96
489_S	505_N	0.698	0.96
131_D	134_V	0.697	0.96
288_N	350_S	0.695	0.96
489_S	497_N	0.695	0.96
455_L	465_L	0.695	0.96
442_S	445_Y	0.695	0.96
385_I	396_R	0.694	0.96
138_E	400_A	0.693	0.96
166_D	169_I	0.693	0.96
416_G	421_S	0.691	0.96
276_A	372_A	0.688	0.96
336_S	339_T	0.687	0.96
40_D	43_E	0.686	0.96
180_F	226_G	0.686	0.96
457_G	461_A	0.686	0.96
73_Q	84_P	0.686	0.96
100_E	108_V	0.685	0.96
160_Y	192_L	0.685	0.96
42_S	110_Q	0.681	0.96
137_P	141_D	0.681	0.96
114_L	240_I	0.680	0.96
285_A	295_S	0.679	0.95
430_L	434_G	0.678	0.95
487_T	494_T	0.677	0.95
174_S	183_D	0.677	0.95
420_D	424_S	0.676	0.95
419_G	425_S	0.676	0.95
164_D	207_A	0.675	0.95
247_A	275_A	0.674	0.95
488_G	493_I	0.670	0.95
180_F	188_Y	0.670	0.95
116_A	235_G	0.670	0.95
417_G	427_S	0.669	0.95
326_D	379_K	0.669	0.95
294_V	324_K	0.666	0.95
334_V	355_V	0.665	0.95
455_L	461_A	0.663	0.95
228_A	240_I	0.662	0.95
488_G	492_S	0.660	0.95
150_T	252_A	0.660	0.95
489_S	498_P	0.660	0.95
453_I	461_A	0.658	0.95
155_D	197_H	0.657	0.95
112_V	265_T	0.656	0.95
69_V	72_V	0.655	0.95
156_Q	196_I	0.653	0.94
152_G	226_G	0.652	0.94
493_I	502_V	0.651	0.94
162_H	203_G	0.650	0.94
441_F	448_P	0.648	0.94
492_S	498_P	0.648	0.94
205_A	221_S	0.647	0.94
177_G	182_D	0.646	0.94
451_V	456_D	0.643	0.94
305_A	324_K	0.642	0.94
123_P	128_Q	0.642	0.94
488_G	495_I	0.642	0.94
489_S	496_D	0.641	0.94
158_V	202_A	0.640	0.94
311_P	333_N	0.640	0.94
284_A	300_Y	0.638	0.94
350_S	354_P	0.638	0.94
155_D	198_G	0.638	0.94
476_T	479_S	0.638	0.94
444_E	447_N	0.637	0.94
57_Q	61_Q	0.632	0.93
154_V	226_G	0.632	0.93
327_L	359_V	0.631	0.93
320_N	325_I	0.631	0.93
417_G	426_V	0.628	0.93
227_R	230_S	0.627	0.93
242_D	245_T	0.625	0.93
490_Q	495_I	0.624	0.93
140_W	143_T	0.624	0.93
493_I	499_D	0.624	0.93
464_D	491_E	0.624	0.93
251_G	280_A	0.622	0.93
308_A	331_G	0.621	0.93
325_I	393_G	0.619	0.93
254_V	364_L	0.619	0.93
324_K	327_L	0.619	0.93
495_I	499_D	0.618	0.93
488_G	498_P	0.618	0.93
422_T	430_L	0.614	0.92
352_A	355_V	0.614	0.92
252_A	280_A	0.614	0.92
175_N	182_D	0.614	0.92
462_D	466_Y	0.613	0.92
389_D	392_Q	0.613	0.92
262_G	289_D	0.613	0.92
391_Q	395_G	0.612	0.92
197_H	350_S	0.611	0.92
373_E	408_G	0.610	0.92
120_P	123_P	0.610	0.92
495_I	498_P	0.610	0.92
230_S	233_G	0.610	0.92
120_P	125_F	0.609	0.92
174_S	180_F	0.608	0.92
449_S	452_V	0.605	0.92
247_A	251_G	0.605	0.92
423_S	427_S	0.605	0.92
175_N	222_S	0.604	0.92
149_V	365_A	0.603	0.92
294_V	299_A	0.602	0.92
177_G	184_D	0.601	0.92
176_G	181_V	0.601	0.92
304_L	356_V	0.600	0.92
235_G	239_D	0.599	0.91
57_Q	60_E	0.596	0.91
131_D	136_A	0.595	0.91
54_D	57_Q	0.594	0.91
182_D	188_Y	0.594	0.91
293_S	296_Y	0.593	0.91
82_G	85_A	0.593	0.91
54_D	58_H	0.592	0.91
491_E	497_N	0.591	0.91
279_G	371_N	0.591	0.91
462_D	465_L	0.591	0.91
170_D	178_R	0.590	0.91
476_T	485_W	0.589	0.91
137_P	140_W	0.587	0.91
149_V	254_V	0.587	0.91
67_E	72_V	0.587	0.91
501_S	504_L	0.586	0.91
152_G	255_I	0.586	0.91
194_E	230_S	0.586	0.91
498_P	506_V	0.585	0.91
441_F	444_E	0.585	0.91
333_N	345_S	0.583	0.90
492_S	497_N	0.583	0.90
420_D	427_S	0.581	0.90
304_L	360_A	0.581	0.90
55_P	58_H	0.581	0.90
260_G	297_P	0.581	0.90
255_I	259_L	0.580	0.90
377_H	381_T	0.580	0.90
418_G	426_V	0.580	0.90
194_E	227_R	0.579	0.90
309_L	385_I	0.579	0.90
174_S	184_D	0.578	0.90
501_S	506_V	0.576	0.90
174_S	185_G	0.576	0.90
486_T	494_T	0.575	0.90
364_L	371_N	0.575	0.90
70_G	74_E	0.574	0.90
395_G	398_D	0.572	0.90
382_A	394_A	0.572	0.90
130_A	133_Q	0.571	0.89
146_D	365_A	0.571	0.89
56_Q	60_E	0.571	0.89
457_G	463_F	0.568	0.89
84_P	238_A	0.568	0.89
237_T	265_T	0.567	0.89
247_A	282_V	0.566	0.89
428_G	434_G	0.566	0.89
165_L	202_A	0.566	0.89
460_N	463_F	0.565	0.89
92_R	96_V	0.564	0.89
497_N	502_V	0.563	0.89
176_G	185_G	0.563	0.89
443_Y	447_N	0.563	0.89
465_L	478_S	0.560	0.89
210_N	214_G	0.558	0.88
482_F	485_W	0.558	0.88
151_I	206_A	0.557	0.88
178_R	186_D	0.557	0.88
363_T	399_A	0.556	0.88
384_D	389_D	0.556	0.88
421_S	431_R	0.556	0.88
471_T	475_P	0.556	0.88
480_Y	483_R	0.556	0.88
495_I	500_T	0.555	0.88
496_D	499_D	0.555	0.88
435_D	438_C	0.551	0.88
472_N	476_T	0.551	0.88
480_Y	506_V	0.551	0.88
432_G	436_S	0.551	0.88
177_G	181_V	0.550	0.88
481_E	484_S	0.550	0.88
177_G	187_P	0.549	0.88
58_H	62_Y	0.549	0.88
139_A	400_A	0.548	0.87
205_A	256_N	0.548	0.87
101_S	104_T	0.547	0.87
204_I	346_I	0.547	0.87
52_E	60_E	0.546	0.87
93_K	97_D	0.545	0.87
439_W	444_E	0.545	0.87
81_V	85_A	0.544	0.87
237_T	240_I	0.543	0.87
230_S	239_D	0.543	0.87
453_I	463_F	0.541	0.87
399_A	402_A	0.541	0.87
290_G	321_Y	0.541	0.87
42_S	46_V	0.539	0.87
428_G	431_R	0.538	0.87
473_A	476_T	0.537	0.86
52_E	55_P	0.535	0.86
121_N	124_R	0.533	0.86
336_S	352_A	0.533	0.86
276_A	371_N	0.533	0.86
145_G	148_G	0.533	0.86
170_D	185_G	0.533	0.86
215_V	220_N	0.533	0.86
47_G	50_N	0.532	0.86
452_V	455_L	0.531	0.86
118_L	121_N	0.530	0.86
427_S	431_R	0.527	0.85
156_Q	227_R	0.527	0.85
254_V	374_L	0.527	0.85
135_N	383_V	0.527	0.85
500_T	504_L	0.527	0.85
78_T	81_V	0.526	0.85
331_G	351_M	0.526	0.85
177_G	183_D	0.526	0.85
170_D	186_D	0.525	0.85
416_G	422_T	0.525	0.85
149_V	152_G	0.524	0.85
420_D	426_V	0.523	0.85
130_A	355_V	0.523	0.85
494_T	499_D	0.523	0.85
159_K	340_A	0.522	0.85
471_T	476_T	0.521	0.85
491_E	505_N	0.521	0.85
59_V	64_Q	0.520	0.85
99_L	102_R	0.520	0.85
417_G	429_S	0.519	0.85
377_H	380_A	0.518	0.84
469_T	504_L	0.517	0.84
54_D	61_Q	0.516	0.84
216_T	219_G	0.516	0.84
215_V	337_T	0.515	0.84
107_Y	270_N	0.513	0.84
424_S	432_G	0.513	0.84
496_D	501_S	0.512	0.84
424_S	428_G	0.512	0.84
467_A	506_V	0.511	0.84
244_I	282_V	0.510	0.83
148_G	221_S	0.510	0.83
159_K	338_W	0.509	0.83
193_N	227_R	0.509	0.83
421_S	425_S	0.508	0.83
149_V	362_L	0.508	0.83
421_S	429_S	0.508	0.83
200_H	338_W	0.508	0.83
237_T	261_G	0.508	0.83
175_N	181_V	0.508	0.83
423_S	428_G	0.507	0.83
425_S	428_G	0.507	0.83
432_G	435_D	0.506	0.83
272_V	284_A	0.506	0.83
492_S	495_I	0.506	0.83
382_A	393_G	0.505	0.83
140_W	145_G	0.504	0.83
491_E	494_T	0.503	0.83
220_N	365_A	0.502	0.83
240_I	268_M	0.501	0.82
174_S	187_P	0.501	0.82
241_A	268_M	0.501	0.82
54_D	60_E	0.501	0.82
317_S	347_S	0.500	0.82
460_N	465_L	0.500	0.82

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3afgA	1	0.8895	100	0.326	Contact Map
3whiA	2	0.661	100	0.346	Contact Map
3wiuA	2	0.6648	100	0.37	Contact Map
1r6vA	1	0.8762	100	0.372	Contact Map
2id4A	1	0.7752	100	0.388	Contact Map
4tr2A	2	0.6762	100	0.399	Contact Map
3t41A	1	0.659	100	0.405	Contact Map
1wmdA	1	0.7105	100	0.41	Contact Map
4rydA	4	0.7638	100	0.415	Contact Map
1dbiA	1	0.5124	100	0.416	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.013 seconds.