Q9HHV3 - HALSA - GREMLIN Contacts

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Q9HHV3 - L-2,4-diaminobutyrate decarboxylase

UniProt:	Q9HHV3	Sequences: MEAACDAVLDVIGGAHGPYSGASYDRLRDRLADTTALPAEGHPLEDVLAAVREDVLANAVHPSDETCVAHLQCPPMVPALAAEALLTASNQSLDSFDQAPAATVVEERLIADLTALYELGPAADGVVTGGGTESNHQALLLARDDYVETVFGQSVREHGLPPAAQDLRILCSADAHFTAAQSAALLGLGEDAVVTIPTDGRHRMDATALRETVERLNDAGKHPFAVVGTAGTTDFGSIDPLSAVADVAATHDLWVHVDAAFGGALAVSDQHSERLSGIDRADSVAVDFHKLFFQPIACGALLVADGESFELMSRNAAYLNPAGDAVPNLVAKSTRTTRRFDALKPYVAFRTLGRDGLGALVDRTLALADDVAGLLRADPAFELACEPTLNAVTFRYRPVREHAHCDPGPWADHVTEAAREQLFDAGTAVVARTTVDDRAHVKFTLMNPRTTVADIQSVLVAFKGHAATIEAADRTAPITTAAGGDQ	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	486 (415)
Sequences:	4828 (3036)
Seq/√Len:	149.0

ECOLI - DCEA DCEB
HALSA - Q9HHV3

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
210_R	250_T	6.224	1.00
240_P	243_A	5.297	1.00
199_D	203_R	4.100	1.00
246_D	280_R	4.087	1.00
226_V	248_A	3.874	1.00
370_D	456_Q	3.533	1.00
259_A	263_G	3.504	1.00
40_E	355_D	3.378	1.00
249_A	280_R	3.374	1.00
228_G	244_V	3.324	1.00
374_L	456_Q	3.181	1.00
242_S	276_S	3.145	1.00
196_I	212_T	3.122	1.00
382_E	395_R	3.075	1.00
382_E	397_R	3.060	1.00
228_G	255_V	2.852	1.00
173_A	197_P	2.818	1.00
208_A	211_E	2.754	1.00
370_D	452_V	2.573	1.00
378_D	463_K	2.549	1.00
169_I	183_A	2.470	1.00
197_P	208_A	2.450	1.00
245_A	280_R	2.433	1.00
372_A	387_P	2.364	1.00
208_A	212_T	2.362	1.00
210_R	214_E	2.349	1.00
210_R	251_H	2.312	1.00
374_L	459_L	2.303	1.00
372_A	383_L	2.283	1.00
245_A	255_V	2.275	1.00
50_A	350_R	2.265	1.00
242_S	246_D	2.253	1.00
83_E	87_T	2.222	1.00
228_G	241_L	2.169	1.00
206_A	247_V	2.133	1.00
173_A	198_T	2.122	1.00
372_A	376_R	2.120	1.00
375_L	381_F	2.111	1.00
374_L	377_A	2.070	1.00
248_A	253_L	2.066	1.00
136_H	185_L	2.045	1.00
270_Q	362_D	2.008	1.00
46_D	49_A	1.991	1.00
183_A	193_V	1.988	1.00
206_A	243_A	1.986	1.00
196_I	204_M	1.968	1.00
268_S	362_D	1.944	1.00
303_V	309_F	1.942	1.00
226_V	244_V	1.938	1.00
39_A	358_G	1.910	1.00
140_L	186_L	1.901	1.00
142_A	225_A	1.874	1.00
421_Q	468_T	1.872	1.00
355_D	359_A	1.867	1.00
373_G	377_A	1.827	1.00
196_I	208_A	1.822	1.00
43_P	46_D	1.822	1.00
180_A	195_T	1.821	1.00
39_A	354_R	1.814	1.00
66_T	454_D	1.796	1.00
241_L	255_V	1.792	1.00
117_Y	284_V	1.783	1.00
161_P	165_Q	1.772	1.00
366_A	452_V	1.760	1.00
242_S	280_R	1.758	1.00
354_R	358_G	1.745	1.00
116_L	354_R	1.726	1.00
305_D	308_S	1.706	1.00
138_A	301_L	1.685	1.00
39_A	355_D	1.667	1.00
113_L	300_A	1.662	1.00
42_H	350_R	1.658	1.00
214_E	251_H	1.648	1.00
460_V	464_G	1.627	1.00
139_L	225_A	1.625	1.00
375_L	383_L	1.608	1.00
168_R	194_V	1.603	1.00
209_L	244_V	1.562	1.00
420_E	424_D	1.556	1.00
79_A	295_P	1.556	1.00
270_Q	366_A	1.550	1.00
248_A	255_V	1.549	1.00
212_T	215_R	1.543	1.00
210_R	247_V	1.533	1.00
117_Y	266_A	1.530	1.00
370_D	374_L	1.523	1.00
416_E	439_A	1.514	1.00
171_C	193_V	1.499	1.00
425_A	461_A	1.498	1.00
425_A	464_G	1.493	1.00
135_N	178_T	1.486	1.00
211_E	215_R	1.472	1.00
358_G	362_D	1.472	1.00
417_A	421_Q	1.470	1.00
49_A	53_E	1.465	1.00
298_C	345_P	1.447	1.00
213_V	253_L	1.427	1.00
359_A	363_R	1.427	1.00
246_D	249_A	1.427	1.00
139_L	169_I	1.425	1.00
355_D	358_G	1.416	1.00
245_A	278_I	1.414	1.00
199_D	205_D	1.404	1.00
456_Q	460_V	1.404	1.00
461_A	464_G	1.399	1.00
376_R	386_E	1.389	1.00
205_D	208_A	1.375	1.00
243_A	246_D	1.374	1.00
210_R	243_A	1.373	1.00
171_C	175_A	1.365	1.00
234_D	433_T	1.365	1.00
384_A	440_H	1.350	1.00
374_L	378_D	1.349	1.00
244_V	255_V	1.344	1.00
368_A	392_V	1.341	1.00
257_V	281_A	1.340	1.00
213_V	251_H	1.336	1.00
380_A	463_K	1.311	1.00
245_A	249_A	1.301	1.00
203_R	388_T	1.299	1.00
362_D	366_A	1.296	1.00
42_H	46_D	1.285	1.00
206_A	240_P	1.277	1.00
173_A	195_T	1.275	1.00
452_V	456_Q	1.270	1.00
179_A	227_V	1.263	1.00
265_L	361_V	1.257	1.00
36_A	115_A	1.255	1.00
297_A	341_D	1.244	1.00
213_V	247_V	1.243	1.00
145_D	308_S	1.238	1.00
371_V	455_I	1.236	1.00
257_V	278_I	1.235	1.00
247_V	251_H	1.225	1.00
378_D	381_F	1.221	1.00
117_Y	286_V	1.217	1.00
80_L	84_A	1.216	1.00
451_T	454_D	1.205	1.00
288_F	300_A	1.197	1.00
139_L	186_L	1.194	1.00
307_E	310_E	1.194	1.00
297_A	339_R	1.192	1.00
169_I	225_A	1.191	1.00
114_T	123_A	1.173	1.00
76_M	348_A	1.163	1.00
282_D	308_S	1.161	1.00
271_H	365_L	1.156	1.00
380_A	397_R	1.150	1.00
380_A	467_A	1.147	1.00
159_G	189_G	1.145	1.00
169_I	188_L	1.136	1.00
398_P	401_E	1.132	0.99
196_I	209_L	1.131	0.99
427_T	461_A	1.125	0.99
244_V	248_A	1.124	0.99
170_L	212_T	1.123	0.99
428_A	458_V	1.119	0.99
268_S	271_H	1.118	0.99
204_M	244_V	1.113	0.99
241_L	244_V	1.111	0.99
155_V	160_L	1.110	0.99
204_M	209_L	1.110	0.99
271_H	362_D	1.110	0.99
119_L	281_A	1.109	0.99
418_A	465_H	1.108	0.99
421_Q	424_D	1.103	0.99
291_L	361_V	1.098	0.99
413_H	417_A	1.097	0.99
421_Q	465_H	1.093	0.99
174_D	198_T	1.092	0.99
363_R	367_L	1.086	0.99
124_D	332_K	1.086	0.99
136_H	186_L	1.085	0.99
47_V	351_T	1.085	0.99
261_F	390_N	1.083	0.99
348_A	357_L	1.082	0.99
43_P	47_V	1.081	0.99
140_L	144_D	1.080	0.99
209_L	247_V	1.077	0.99
454_D	457_S	1.074	0.99
415_T	418_A	1.067	0.99
170_L	194_V	1.060	0.99
138_A	225_A	1.056	0.99
82_A	86_L	1.055	0.99
188_L	224_F	1.055	0.99
373_G	376_R	1.055	0.99
185_L	334_T	1.053	0.99
378_D	459_L	1.046	0.99
367_L	455_I	1.044	0.99
55_V	343_L	1.042	0.99
230_A	241_L	1.041	0.99
66_T	457_S	1.032	0.99
38_P	41_G	1.027	0.99
367_L	452_V	1.027	0.99
171_C	195_T	1.021	0.99
79_A	83_E	1.018	0.99
48_L	51_V	1.016	0.99
294_Q	348_A	1.011	0.99
124_D	309_F	1.007	0.99
269_D	272_S	1.002	0.99
288_F	345_P	0.995	0.99
375_L	394_F	0.990	0.99
134_S	299_G	0.985	0.99
194_V	212_T	0.983	0.99
371_V	443_F	0.980	0.99
296_I	337_T	0.980	0.99
293_F	360_L	0.973	0.98
433_T	440_H	0.973	0.98
371_V	458_V	0.972	0.98
419_R	441_V	0.971	0.98
110_I	125_G	0.970	0.98
291_L	364_T	0.969	0.98
317_A	433_T	0.968	0.98
269_D	273_E	0.964	0.98
396_Y	414_V	0.962	0.98
42_H	50_A	0.957	0.98
92_S	337_T	0.956	0.98
241_L	257_V	0.954	0.98
461_A	465_H	0.948	0.98
147_V	187_G	0.943	0.98
230_A	257_V	0.942	0.98
264_A	286_V	0.940	0.98
226_V	253_L	0.937	0.98
133_E	335_R	0.937	0.98
462_F	466_A	0.934	0.98
168_R	214_E	0.932	0.98
170_L	196_I	0.931	0.98
129_G	133_E	0.928	0.98
170_L	223_P	0.926	0.98
415_T	441_V	0.920	0.98
140_L	185_L	0.915	0.98
142_A	254_W	0.914	0.98
209_L	226_V	0.913	0.98
417_A	420_E	0.911	0.98
110_I	300_A	0.909	0.98
135_N	285_A	0.909	0.98
49_A	52_R	0.908	0.98
169_I	224_F	0.908	0.98
176_H	290_K	0.906	0.98
247_V	253_L	0.906	0.98
422_L	462_F	0.906	0.98
42_H	47_V	0.906	0.98
146_Y	224_F	0.903	0.98
458_V	462_F	0.899	0.97
370_D	373_G	0.899	0.97
104_V	108_R	0.898	0.97
371_V	445_L	0.897	0.97
155_V	158_H	0.896	0.97
369_D	372_A	0.896	0.97
156_R	159_G	0.895	0.97
111_A	115_A	0.894	0.97
363_R	366_A	0.891	0.97
115_A	121_P	0.891	0.97
450_T	454_D	0.890	0.97
463_K	467_A	0.889	0.97
52_R	87_T	0.883	0.97
360_L	364_T	0.879	0.97
47_V	347_V	0.879	0.97
374_L	460_V	0.878	0.97
235_F	393_T	0.877	0.97
168_R	189_G	0.877	0.97
368_A	372_A	0.873	0.97
172_S	175_A	0.869	0.97
465_H	468_T	0.860	0.97
197_P	212_T	0.857	0.97
120_G	123_A	0.854	0.97
235_F	435_V	0.852	0.96
170_L	209_L	0.848	0.96
178_T	285_A	0.845	0.96
265_L	389_L	0.845	0.96
51_V	85_L	0.843	0.96
26_R	30_R	0.836	0.96
80_L	87_T	0.829	0.96
375_L	459_L	0.828	0.96
82_A	347_V	0.824	0.96
430_V	441_V	0.823	0.96
203_R	240_P	0.822	0.96
372_A	392_V	0.822	0.96
174_D	237_S	0.820	0.96
129_G	335_R	0.819	0.96
464_G	468_T	0.819	0.96
139_L	182_S	0.811	0.95
115_A	354_R	0.810	0.95
425_A	465_H	0.808	0.95
242_S	272_S	0.808	0.95
83_E	86_L	0.806	0.95
340_F	343_L	0.806	0.95
50_A	54_D	0.806	0.95
396_Y	466_A	0.803	0.95
224_F	253_L	0.803	0.95
260_A	285_A	0.802	0.95
132_T	181_Q	0.802	0.95
226_V	255_V	0.802	0.95
371_V	392_V	0.801	0.95
273_E	276_S	0.798	0.95
367_L	370_D	0.795	0.95
38_P	112_D	0.795	0.95
374_L	463_K	0.795	0.95
127_V	300_A	0.793	0.95
167_L	224_F	0.792	0.95
112_D	349_F	0.792	0.95
395_R	415_T	0.788	0.95
237_S	388_T	0.787	0.95
378_D	460_V	0.787	0.95
135_N	179_A	0.787	0.95
269_D	358_G	0.787	0.95
372_A	375_L	0.785	0.94
169_I	193_V	0.782	0.94
376_R	383_L	0.781	0.94
138_A	142_A	0.781	0.94
161_P	164_A	0.779	0.94
233_T	318_Y	0.778	0.94
425_A	468_T	0.777	0.94
166_D	222_H	0.776	0.94
77_V	295_P	0.774	0.94
416_E	420_E	0.771	0.94
207_T	243_A	0.770	0.94
51_V	347_V	0.768	0.94
136_H	334_T	0.768	0.94
131_G	135_N	0.767	0.94
249_A	282_D	0.766	0.94
205_D	243_A	0.764	0.94
415_T	439_A	0.760	0.93
372_A	386_E	0.759	0.93
377_A	463_K	0.759	0.93
381_F	462_F	0.758	0.93
107_E	329_L	0.755	0.93
168_R	223_P	0.751	0.93
229_T	232_T	0.750	0.93
68_V	445_L	0.750	0.93
419_R	432_R	0.745	0.93
105_V	343_L	0.742	0.93
271_H	274_R	0.740	0.93
155_V	161_P	0.740	0.93
106_E	338_R	0.739	0.92
264_A	292_F	0.738	0.92
447_N	450_T	0.735	0.92
102_A	340_F	0.731	0.92
122_A	304_A	0.731	0.92
172_S	204_M	0.730	0.92
26_R	29_D	0.728	0.92
396_Y	415_T	0.727	0.92
170_L	213_V	0.726	0.92
111_A	114_T	0.725	0.92
284_V	302_L	0.724	0.92
337_T	446_M	0.721	0.92
445_L	455_I	0.718	0.91
381_F	463_K	0.718	0.91
385_C	393_T	0.716	0.91
282_D	304_A	0.715	0.91
171_C	227_V	0.714	0.91
230_A	238_I	0.714	0.91
274_R	277_G	0.714	0.91
457_S	460_V	0.711	0.91
432_R	439_A	0.709	0.91
119_L	123_A	0.709	0.91
109_L	127_V	0.707	0.91
443_F	458_V	0.704	0.91
356_G	360_L	0.703	0.90
112_D	267_V	0.703	0.90
197_P	205_D	0.700	0.90
457_S	461_A	0.700	0.90
427_T	457_S	0.700	0.90
204_M	228_G	0.699	0.90
200_G	205_D	0.697	0.90
99_A	103_T	0.693	0.90
232_T	235_F	0.691	0.90
78_P	82_A	0.690	0.90
117_Y	267_V	0.688	0.90
247_V	250_T	0.688	0.90
330_V	336_T	0.687	0.89
105_V	342_A	0.686	0.89
108_R	346_Y	0.685	0.89
144_D	310_E	0.685	0.89
287_D	299_G	0.683	0.89
173_A	204_M	0.682	0.89
246_D	250_T	0.681	0.89
267_V	292_F	0.680	0.89
202_H	235_F	0.680	0.89
114_T	302_L	0.679	0.89
396_Y	401_E	0.678	0.89
177_F	336_T	0.677	0.89
276_S	279_D	0.677	0.89
459_L	463_K	0.676	0.89
95_S	330_V	0.676	0.89
46_D	50_A	0.675	0.89
423_F	429_V	0.674	0.89
138_A	141_L	0.674	0.89
418_A	466_A	0.674	0.89
94_D	330_V	0.672	0.88
422_L	465_H	0.671	0.88
137_Q	301_L	0.671	0.88
141_L	303_V	0.670	0.88
48_L	52_R	0.670	0.88
94_D	98_Q	0.667	0.88
40_E	211_E	0.666	0.88
365_L	369_D	0.665	0.88
265_L	275_L	0.664	0.88
238_I	266_A	0.663	0.88
125_G	302_L	0.663	0.88
207_T	211_E	0.663	0.88
48_L	83_E	0.662	0.88
230_A	266_A	0.661	0.88
364_T	367_L	0.657	0.87
128_T	287_D	0.657	0.87
202_H	237_S	0.656	0.87
366_A	373_G	0.655	0.87
396_Y	418_A	0.654	0.87
53_E	57_A	0.654	0.87
285_A	299_G	0.653	0.87
76_M	352_L	0.653	0.87
369_D	373_G	0.653	0.87
265_L	291_L	0.652	0.87
56_L	59_A	0.651	0.87
66_T	427_T	0.651	0.87
296_I	335_R	0.650	0.87
131_G	287_D	0.649	0.87
249_A	279_D	0.648	0.87
363_R	451_T	0.648	0.87
264_A	267_V	0.647	0.86
434_T	439_A	0.647	0.86
363_R	452_V	0.644	0.86
178_T	318_Y	0.643	0.86
69_A	390_N	0.642	0.86
233_T	290_K	0.641	0.86
223_P	253_L	0.640	0.86
144_D	184_A	0.638	0.86
103_T	329_L	0.638	0.86
204_M	226_V	0.637	0.86
107_E	327_P	0.634	0.85
144_D	147_V	0.633	0.85
131_G	285_A	0.633	0.85
86_L	344_K	0.633	0.85
171_C	179_A	0.632	0.85
203_R	237_S	0.632	0.85
274_R	388_T	0.631	0.85
395_R	398_P	0.631	0.85
136_H	182_S	0.630	0.85
263_G	286_V	0.630	0.85
148_E	310_E	0.628	0.85
232_T	237_S	0.627	0.85
70_H	98_Q	0.626	0.85
72_Q	92_S	0.626	0.85
319_L	433_T	0.626	0.85
256_H	283_S	0.625	0.85
36_A	39_A	0.623	0.84
229_T	234_D	0.623	0.84
83_E	344_K	0.622	0.84
395_R	438_R	0.621	0.84
113_L	288_F	0.620	0.84
272_S	279_D	0.615	0.84
416_E	434_T	0.612	0.83
129_G	339_R	0.611	0.83
147_V	167_L	0.610	0.83
41_G	351_T	0.610	0.83
265_L	365_L	0.609	0.83
126_V	333_S	0.609	0.83
141_L	145_D	0.608	0.83
254_W	283_S	0.608	0.83
199_D	240_P	0.606	0.83
145_D	254_W	0.604	0.83
157_E	160_L	0.602	0.82
248_A	251_H	0.602	0.82
370_D	377_A	0.601	0.82
128_T	134_S	0.601	0.82
419_R	430_V	0.601	0.82
47_V	52_R	0.599	0.82
146_Y	222_H	0.598	0.82
120_G	304_A	0.598	0.82
134_S	260_A	0.598	0.82
425_A	428_A	0.597	0.82
201_R	386_E	0.597	0.82
44_L	78_P	0.596	0.82
68_V	458_V	0.595	0.82
317_A	434_T	0.594	0.81
78_P	351_T	0.593	0.81
316_A	320_N	0.593	0.81
205_D	209_L	0.592	0.81
341_D	344_K	0.591	0.81
206_A	210_R	0.590	0.81
291_L	389_L	0.588	0.81
130_G	289_H	0.588	0.81
210_R	213_V	0.587	0.81
292_F	357_L	0.587	0.81
82_A	88_A	0.587	0.81
128_T	299_G	0.587	0.81
213_V	223_P	0.587	0.81
144_D	224_F	0.586	0.81
109_L	345_P	0.586	0.81
130_G	290_K	0.586	0.81
352_L	360_L	0.586	0.81
453_A	457_S	0.584	0.80
299_G	337_T	0.583	0.80
47_V	350_R	0.581	0.80
67_C	73_C	0.579	0.80
134_S	285_A	0.577	0.80
291_L	390_N	0.577	0.80
394_F	441_V	0.576	0.79
207_T	210_R	0.576	0.79
116_L	349_F	0.575	0.79
328_N	331_A	0.575	0.79
365_L	389_L	0.575	0.79
148_E	311_L	0.574	0.79
67_C	70_H	0.572	0.79
398_P	466_A	0.572	0.79
450_T	455_I	0.571	0.79
117_Y	302_L	0.570	0.79
172_S	229_T	0.570	0.79
105_V	298_C	0.570	0.79
352_L	357_L	0.568	0.79
229_T	233_T	0.568	0.79
393_T	440_H	0.568	0.79
174_D	232_T	0.568	0.79
460_V	468_T	0.567	0.78
294_Q	298_C	0.567	0.78
155_V	159_G	0.566	0.78
364_T	390_N	0.566	0.78
144_D	311_L	0.566	0.78
69_A	429_V	0.565	0.78
67_C	337_T	0.565	0.78
38_P	42_H	0.564	0.78
268_S	361_V	0.564	0.78
113_L	292_F	0.563	0.78
127_V	340_F	0.562	0.78
421_Q	425_A	0.561	0.78
71_L	234_D	0.560	0.78
94_D	336_T	0.560	0.78
418_A	422_L	0.559	0.77
40_E	158_H	0.558	0.77
119_L	304_A	0.557	0.77
127_V	342_A	0.557	0.77
112_D	346_Y	0.557	0.77
141_L	309_F	0.556	0.77
303_V	308_S	0.554	0.77
241_L	245_A	0.554	0.77
303_V	317_A	0.554	0.77
242_S	245_A	0.553	0.77
245_A	279_D	0.553	0.77
272_S	276_S	0.552	0.77
72_Q	94_D	0.552	0.77
70_H	97_D	0.552	0.77
132_T	135_N	0.552	0.77
427_T	464_G	0.551	0.76
55_V	59_A	0.551	0.76
45_E	49_A	0.550	0.76
204_M	229_T	0.550	0.76
226_V	247_V	0.548	0.76
453_A	456_Q	0.547	0.76
419_R	428_A	0.546	0.76
146_Y	252_D	0.546	0.76
266_A	284_V	0.545	0.76
428_A	461_A	0.545	0.76
259_A	262_G	0.544	0.76
71_L	261_F	0.544	0.76
37_L	349_F	0.543	0.75
95_S	98_Q	0.543	0.75
189_G	194_V	0.541	0.75
261_F	391_A	0.540	0.75
40_E	46_D	0.540	0.75
418_A	461_A	0.540	0.75
287_D	335_R	0.540	0.75
172_S	198_T	0.539	0.75
206_A	244_V	0.537	0.75
319_L	336_T	0.536	0.74
83_E	339_R	0.536	0.74
313_S	331_A	0.535	0.74
296_I	336_T	0.535	0.74
130_G	287_D	0.535	0.74
234_D	317_A	0.534	0.74
77_V	81_A	0.534	0.74
145_D	310_E	0.534	0.74
104_V	107_E	0.532	0.74
310_E	313_S	0.532	0.74
230_A	275_L	0.532	0.74
371_V	381_F	0.532	0.74
228_G	245_A	0.532	0.74
316_A	319_L	0.531	0.74
320_N	336_T	0.531	0.74
120_G	279_D	0.527	0.73
259_A	284_V	0.527	0.73
171_C	183_A	0.527	0.73
40_E	250_T	0.527	0.73
458_V	461_A	0.527	0.73
336_T	341_D	0.527	0.73
127_V	298_C	0.527	0.73
143_R	187_G	0.526	0.73
286_V	292_F	0.524	0.73
131_G	299_G	0.524	0.73
94_D	299_G	0.524	0.73
382_E	398_P	0.523	0.73
246_D	255_V	0.523	0.73
201_R	388_T	0.523	0.73
373_G	386_E	0.522	0.73
108_R	111_A	0.521	0.72
366_A	369_D	0.519	0.72
66_T	458_V	0.518	0.72
275_L	278_I	0.517	0.72
37_L	112_D	0.517	0.72
241_L	278_I	0.516	0.72
299_G	429_V	0.516	0.72
387_P	390_N	0.515	0.72
134_S	442_K	0.515	0.72
62_P	67_C	0.513	0.71
261_F	444_T	0.513	0.71
45_E	460_V	0.511	0.71
356_G	359_A	0.511	0.71
366_A	370_D	0.511	0.71
215_R	247_V	0.510	0.71
43_P	351_T	0.510	0.71
118_E	276_S	0.509	0.71
70_H	336_T	0.508	0.71
45_E	80_L	0.508	0.71
27_L	104_V	0.508	0.71
234_D	393_T	0.507	0.70
415_T	433_T	0.507	0.70
107_E	111_A	0.506	0.70
245_A	277_G	0.506	0.70
67_C	98_Q	0.504	0.70
27_L	31_L	0.504	0.70
177_F	330_V	0.503	0.70
258_D	290_K	0.502	0.70
54_D	57_A	0.500	0.69

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4ritB	2	0.9156	100	0.392	Contact Map
2qmaA	2	0.9033	100	0.394	Contact Map
4e1oA	2	0.93	100	0.404	Contact Map
3vp6A	2	0.9424	100	0.423	Contact Map
2jisA	2	0.9444	100	0.424	Contact Map
4obuE	2	0.9177	100	0.43	Contact Map
1js3A	2	0.9053	100	0.434	Contact Map
3k40A	2	0.8786	100	0.451	Contact Map
3mc6A	2	0.8189	100	0.599	Contact Map
3hbxA	5	0.856	100	0.607	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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