Q9HHQ5 - HALSA - GREMLIN Contacts

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Q9HHQ5 - sn-glycerol-3-phosphate transport system ATP-binding

UniProt:	Q9HHQ5	Sequences: MSTITLTDLTKHYDSIAAVDGIDLDVLDEEFLVVVGPSGCGKSTTLRLIAGLEDATAGTIRIGGTDVTDSPPEDRDIAMVFQNYALYPHMTAAENMTFGMQSVTDYSSAEIEDRVADAAATLGITELLDRTPDALSGGERQRVAIGRALVREPSVFLLDEPLSNLDAKLRVHMRAELSKLHRELDTTTVYVTHDQTEAMTLGDRVAVLNDGTVQQVAPPQQLYDFPANQFVAGFIGEPAMNLVPVRVRDRPRGLVADHEGFAHPLPDGGSNSALVDRRLTFGVRPEDVLLAGRSATGHEESFEARVTVREPLGEQLLLHCTIGDDELQVKVQPRRDVSTGDTIRLCFDQQRLHLFDPETGDAIYHAASEDQPAKPTPSQ	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	379 (323)
Sequences:	18255 (13150)
Seq/√Len:	731.7

ECOLI - MALK YCJV UGPC CYSA POTA FBPC POTG PROV MODC RBSA YDCT METN ARAG DPPD SAPD MACB YEHX DPPF OPPD YADG DDPD OPPF YHES DDPF GSIA UUP YTFR YECC LSRA TAUB MLAF LPTB HISP CYDC FEPC NIKE MDLA SAPF SSUB MDLB MSBA FHUC GLNQ FECE YOJI PHNC CYDD YPHE YHDZ GLTL ALSA ETTA ZNUC THIQ XYLG ARTP SUFC LIVG PHNK PSTB MODF FTSE MGLA LIVF BTUD NIKD LOLD YEJF CCMA FETA YBBA YDDA PHNL YNJD YBHF YBIT YHIH
BACSU - MSMX YURJ YVRA OPUAA OPUCA OPUBA TAGH METN OPPD YFIL YXLF RBSA YKFD DPPD APPF YHCH APPD YHAQ YDBJ YFMM YVFR YCBN YTRB OPPF YKPA FHUC YFMF YDIF YFMR SKFE ECFA1 YHEH ECSA YUSV SUNT TCYN YVCR YTLC BCEA YFIC YCLP YFIB YGAD YKNV YKNU YLMA BMRA MNTB CYDD YXDL ALBC YHEI NATA SUFC YKOD TCYC YXEO GLNQ YWJA ECFA2 ARTM CYDC FTSE PSTB1 SSUB ZNUC YVRO YCLH PSTB2 YJKB YTHP EXPZ YKNY YYBJ YHCG YUFO YYDI YTRE
HALSA - Q9HHQ5 Q9HR06 Q9HMX3 Q9HNZ9 BTUDA Q9HMW0 Q9HMT3 Q9HMX2 Q9HMU8 Q9HRJ6 PHNC Q9HRH8 Q9HMG1 PSTB2 Q9HHM2 Q9HSQ7 Q9HMG6 Q9HNY3 Q9HRV7 Q9HRZ9 Y2317 Y1631 PSTB1 Q9HHR7 Q9HR96 Q9HR21 Q9HT03 Q9HQA8 Q9HS04 Q9HMC1 Q9HMW1
SULSO - Q97YY4 Q97UF2 Q97UY8 Q97ZC0 Q97VC1 Q7LX64 Q97VF5 Q97UH3 Q97VH6 Q97YP3 Q97UD4 Q97VK8 Q97VK9 Q97UJ9 Q97YK2 Q97X18 Q97VF4 Q97YP7 Q97Z03 Q97YQ7 Q97YP8 Q980W0 Q97U54 Y2030 Y1893 Q97V01 Q97UH4 PSTB Q97W42 Q97V00 Q7LY07 Q7LXM4 Q97VM2 Q97VY4 Q7LX80 Q97Z56 Q97UG5 Q97Z96 Q97UC2 Q97YP4 Q97ZU0 Q980K5 Q980E6

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
217_A	221_Q	4.094	1.00
59_T	66_D	3.806	1.00
33_V	202_G	3.654	1.00
120_A	125_T	3.612	1.00
304_A	320_C	3.512	1.00
30_E	204_R	3.416	1.00
5_T	25_D	3.398	1.00
8_D	21_G	3.389	1.00
7_T	59_T	3.289	1.00
17_A	20_D	3.090	1.00
112_E	116_A	3.060	1.00
307_T	321_T	2.833	1.00
214_Q	228_N	2.762	1.00
32_L	206_A	2.531	1.00
107_S	110_E	2.507	1.00
7_T	61_R	2.488	1.00
218_P	221_Q	2.470	1.00
10_T	17_A	2.468	1.00
20_D	212_T	2.452	1.00
127_L	130_R	2.423	1.00
12_H	17_A	2.393	1.00
10_T	57_A	2.390	1.00
5_T	61_R	2.360	1.00
93_A	129_D	2.358	1.00
93_A	97_T	2.335	1.00
114_R	152_E	2.328	1.00
93_A	116_A	2.298	1.00
93_A	112_E	2.271	1.00
6_L	9_L	2.269	1.00
27_L	30_E	2.235	1.00
8_D	23_D	2.170	1.00
229_Q	280_T	2.163	1.00
61_R	66_D	2.132	1.00
123_G	172_H	2.130	1.00
63_G	154_S	2.099	1.00
179_K	183_E	2.095	1.00
315_Q	330_K	2.037	1.00
76_D	154_S	2.029	1.00
11_K	48_L	2.011	1.00
10_T	21_G	1.951	1.00
4_I	155_V	1.941	1.00
206_A	216_V	1.887	1.00
119_A	128_L	1.880	1.00
114_R	117_D	1.861	1.00
209_N	214_Q	1.845	1.00
206_A	213_V	1.841	1.00
19_V	48_L	1.828	1.00
110_E	113_D	1.822	1.00
113_D	117_D	1.792	1.00
48_L	55_A	1.778	1.00
49_I	189_V	1.766	1.00
9_L	55_A	1.719	1.00
11_K	56_T	1.688	1.00
65_T	154_S	1.679	1.00
109_A	113_D	1.651	1.00
97_T	115_V	1.648	1.00
65_T	70_S	1.635	1.00
66_D	69_D	1.591	1.00
305_R	321_T	1.584	1.00
47_R	53_E	1.574	1.00
158_L	188_T	1.571	1.00
11_K	53_E	1.558	1.00
321_T	324_D	1.556	1.00
106_Y	110_E	1.548	1.00
93_A	115_V	1.542	1.00
199_M	220_Q	1.542	1.00
259_E	262_A	1.535	1.00
62_I	67_V	1.528	1.00
118_A	150_V	1.516	1.00
116_A	120_A	1.508	1.00
110_E	114_R	1.495	1.00
67_V	70_S	1.491	1.00
46_L	191_V	1.491	1.00
229_Q	242_L	1.482	1.00
263_H	266_P	1.482	1.00
122_L	146_G	1.471	1.00
48_L	60_I	1.468	1.00
32_L	216_V	1.464	1.00
6_L	49_I	1.459	1.00
220_Q	224_D	1.435	1.00
97_T	111_I	1.426	1.00
22_I	45_T	1.419	1.00
246_R	278_R	1.411	1.00
320_C	329_V	1.409	1.00
6_L	24_L	1.393	1.00
91_T	94_E	1.379	1.00
274_L	277_R	1.366	1.00
106_Y	111_I	1.365	1.00
12_H	56_T	1.365	1.00
90_M	98_F	1.349	1.00
55_A	60_I	1.336	1.00
256_A	259_E	1.325	1.00
117_D	152_E	1.323	1.00
10_T	20_D	1.321	1.00
117_D	120_A	1.321	1.00
317_L	330_K	1.310	1.00
229_Q	233_G	1.308	1.00
6_L	45_T	1.302	1.00
309_R	318_L	1.298	1.00
91_T	131_T	1.292	1.00
242_L	280_T	1.282	1.00
233_G	242_L	1.281	1.00
260_G	263_H	1.280	1.00
94_E	101_Q	1.274	1.00
116_A	128_L	1.256	1.00
19_V	45_T	1.245	1.00
181_H	188_T	1.230	1.00
89_H	133_D	1.226	1.00
221_Q	225_F	1.218	1.00
7_T	23_D	1.215	1.00
111_I	115_V	1.210	1.00
59_T	68_T	1.207	1.00
244_P	278_R	1.206	1.00
26_V	32_L	1.199	1.00
12_H	57_A	1.193	1.00
259_E	263_H	1.186	1.00
178_S	201_L	1.182	1.00
108_S	112_E	1.181	1.00
99_G	151_R	1.180	1.00
24_L	206_A	1.168	1.00
104_T	151_R	1.163	1.00
32_L	204_R	1.161	1.00
19_V	22_I	1.156	1.00
252_R	256_A	1.155	1.00
61_R	64_G	1.145	1.00
12_H	15_S	1.135	1.00
181_H	186_T	1.122	1.00
94_E	97_T	1.117	1.00
319_H	328_Q	1.102	1.00
209_N	230_F	1.100	1.00
307_T	326_E	1.097	1.00
241_N	245_V	1.091	1.00
255_V	259_E	1.087	1.00
249_D	252_R	1.086	1.00
117_D	183_E	1.086	1.00
257_D	260_G	1.084	1.00
258_H	261_F	1.081	1.00
273_A	277_R	1.079	1.00
28_D	63_G	1.077	1.00
252_R	255_V	1.071	1.00
321_T	326_E	1.071	1.00
27_L	204_R	1.065	1.00
46_L	157_L	1.065	1.00
207_V	231_V	1.065	1.00
207_V	222_L	1.060	1.00
40_C	208_L	1.059	1.00
55_A	68_T	1.055	1.00
12_H	18_A	1.053	1.00
116_A	125_T	1.042	1.00
92_A	135_L	1.041	1.00
9_L	48_L	1.041	1.00
117_D	121_T	1.038	1.00
70_S	74_D	1.037	1.00
255_V	258_H	1.033	1.00
101_Q	108_S	1.024	1.00
118_A	149_L	1.021	1.00
50_A	157_L	1.021	1.00
220_Q	311_P	1.018	1.00
204_R	216_V	1.006	1.00
162_L	190_Y	1.004	1.00
283_V	288_V	1.001	1.00
29_E	185_D	0.993	1.00
244_P	280_T	0.993	1.00
298_H	301_S	0.992	1.00
47_R	52_L	0.990	1.00
96_M	146_G	0.989	1.00
240_M	282_G	0.988	1.00
213_V	216_V	0.984	1.00
178_S	182_R	0.983	1.00
319_H	326_E	0.979	1.00
78_A	148_A	0.979	1.00
24_L	216_V	0.978	1.00
121_T	183_E	0.978	1.00
273_A	276_D	0.978	1.00
97_T	101_Q	0.974	1.00
87_Y	90_M	0.969	1.00
253_G	256_A	0.966	1.00
31_F	181_H	0.959	1.00
152_E	183_E	0.952	1.00
93_A	128_L	0.945	1.00
86_L	132_P	0.942	1.00
98_F	103_V	0.941	1.00
60_I	67_V	0.938	1.00
244_P	325_D	0.936	1.00
87_Y	99_G	0.929	1.00
45_T	208_L	0.928	1.00
131_T	134_A	0.927	1.00
291_A	294_S	0.924	1.00
106_Y	114_R	0.922	1.00
254_L	257_D	0.922	1.00
34_V	206_A	0.916	1.00
35_V	207_V	0.913	1.00
250_R	253_G	0.912	1.00
224_D	311_P	0.909	1.00
8_D	57_A	0.904	1.00
311_P	316_L	0.893	1.00
240_M	243_V	0.892	1.00
304_A	322_I	0.890	1.00
31_F	201_L	0.888	1.00
264_P	267_D	0.885	1.00
28_D	154_S	0.884	1.00
71_P	74_D	0.882	1.00
162_L	177_L	0.880	1.00
95_N	147_R	0.880	1.00
78_A	153_P	0.878	1.00
62_I	77_I	0.877	1.00
13_Y	18_A	0.873	1.00
317_L	328_Q	0.871	1.00
245_V	279_L	0.869	1.00
108_S	111_I	0.868	1.00
306_V	318_L	0.866	1.00
78_A	151_R	0.864	1.00
29_E	187_T	0.856	1.00
9_L	60_I	0.853	1.00
261_F	264_P	0.852	1.00
5_T	64_G	0.851	1.00
322_I	325_D	0.842	1.00
130_R	134_A	0.835	1.00
171_V	175_A	0.833	1.00
192_T	198_A	0.827	1.00
243_V	247_V	0.825	1.00
30_E	203_D	0.825	1.00
256_A	260_G	0.812	1.00
33_V	198_A	0.811	1.00
298_H	306_V	0.809	1.00
96_M	150_V	0.808	1.00
325_D	329_V	0.807	1.00
6_L	60_I	0.803	1.00
168_K	233_G	0.800	1.00
48_L	56_T	0.797	1.00
77_I	155_V	0.797	1.00
240_M	244_P	0.795	1.00
257_D	261_F	0.792	1.00
96_M	99_G	0.790	1.00
179_K	308_V	0.779	1.00
31_F	188_T	0.778	1.00
96_M	119_A	0.774	1.00
26_V	187_T	0.773	1.00
40_C	45_T	0.770	1.00
153_P	156_F	0.768	1.00
176_E	179_K	0.764	1.00
37_P	40_C	0.764	1.00
239_A	242_L	0.760	1.00
325_D	330_K	0.757	1.00
257_D	262_A	0.756	1.00
325_D	328_Q	0.752	1.00
34_V	45_T	0.747	1.00
178_S	200_T	0.745	1.00
175_A	308_V	0.744	1.00
156_F	188_T	0.743	1.00
21_G	57_A	0.742	1.00
271_N	275_V	0.739	1.00
119_A	124_I	0.739	1.00
241_N	244_P	0.739	1.00
76_D	104_T	0.738	1.00
93_A	111_I	0.737	1.00
152_E	186_T	0.736	1.00
243_V	327_L	0.735	1.00
43_S	47_R	0.734	1.00
173_M	176_E	0.734	1.00
196_T	312_L	0.733	1.00
254_L	258_H	0.732	1.00
320_C	327_L	0.732	1.00
90_M	94_E	0.729	1.00
156_F	186_T	0.728	1.00
242_L	245_V	0.727	1.00
13_Y	53_E	0.725	1.00
223_Y	226_P	0.722	1.00
91_T	129_D	0.722	1.00
262_A	265_L	0.720	1.00
22_I	213_V	0.717	1.00
314_E	330_K	0.717	1.00
167_A	171_V	0.715	1.00
48_L	53_E	0.714	1.00
306_V	309_R	0.711	1.00
107_S	111_I	0.710	1.00
223_Y	286_E	0.704	1.00
7_T	25_D	0.704	1.00
170_R	194_D	0.701	1.00
286_E	290_L	0.700	1.00
158_L	190_Y	0.696	1.00
54_D	69_D	0.695	1.00
196_T	200_T	0.692	1.00
247_V	250_R	0.692	1.00
248_R	251_P	0.686	1.00
171_V	196_T	0.684	1.00
269_G	273_A	0.683	1.00
209_N	212_T	0.681	1.00
160_E	193_H	0.681	1.00
154_S	186_T	0.676	1.00
118_A	121_T	0.675	1.00
119_A	125_T	0.674	1.00
208_L	213_V	0.673	1.00
101_Q	111_I	0.672	1.00
258_H	262_A	0.672	1.00
257_D	263_H	0.671	1.00
190_Y	202_G	0.669	1.00
99_G	147_R	0.666	1.00
262_A	267_D	0.665	1.00
312_L	317_L	0.663	1.00
167_A	174_R	0.663	1.00
300_E	303_E	0.662	1.00
262_A	266_P	0.662	1.00
112_E	115_V	0.657	1.00
175_A	319_H	0.657	1.00
124_I	127_L	0.652	1.00
245_V	248_R	0.651	1.00
92_A	143_V	0.649	1.00
90_M	95_N	0.648	1.00
276_D	279_L	0.647	1.00
84_Y	164_N	0.647	1.00
283_V	287_D	0.646	1.00
145_I	158_L	0.646	1.00
126_E	139_E	0.646	1.00
280_T	284_R	0.645	1.00
308_V	311_P	0.644	1.00
284_R	287_D	0.644	1.00
215_Q	231_V	0.643	1.00
32_L	189_V	0.641	1.00
278_R	282_G	0.639	1.00
248_R	275_V	0.639	1.00
230_F	234_F	0.637	1.00
270_S	273_A	0.637	1.00
267_D	270_S	0.637	1.00
78_A	188_T	0.637	1.00
306_V	320_C	0.633	1.00
34_V	189_V	0.632	1.00
179_K	307_T	0.632	1.00
238_P	241_N	0.628	1.00
307_T	319_H	0.627	1.00
30_E	216_V	0.625	1.00
95_N	132_P	0.624	1.00
309_R	313_G	0.623	1.00
322_I	327_L	0.622	1.00
321_T	325_D	0.622	1.00
239_A	243_V	0.622	1.00
132_P	143_V	0.621	1.00
12_H	20_D	0.620	1.00
31_F	177_L	0.620	1.00
109_A	112_E	0.619	1.00
177_L	188_T	0.618	1.00
238_P	242_L	0.618	1.00
272_S	276_D	0.617	1.00
4_I	26_V	0.615	1.00
172_H	176_E	0.614	1.00
157_L	189_V	0.613	1.00
123_G	126_E	0.611	1.00
20_D	210_D	0.611	1.00
288_V	329_V	0.610	1.00
86_L	95_N	0.610	1.00
302_F	306_V	0.610	1.00
248_R	253_G	0.610	1.00
243_V	246_R	0.608	1.00
171_V	237_E	0.607	1.00
263_H	269_G	0.606	1.00
240_M	245_V	0.606	1.00
191_V	195_Q	0.605	1.00
258_H	263_H	0.603	1.00
198_A	202_G	0.603	1.00
6_L	22_I	0.599	1.00
98_F	101_Q	0.599	1.00
178_S	203_D	0.597	1.00
164_N	174_R	0.597	1.00
241_N	246_R	0.596	1.00
14_D	17_A	0.596	1.00
286_E	330_K	0.594	1.00
290_L	293_R	0.591	1.00
96_M	118_A	0.591	1.00
118_A	122_L	0.589	1.00
220_Q	316_L	0.589	1.00
255_V	262_A	0.588	1.00
59_T	69_D	0.588	1.00
283_V	286_E	0.587	1.00
50_A	79_M	0.584	1.00
76_D	151_R	0.582	1.00
163_S	167_A	0.580	1.00
68_T	72_P	0.577	1.00
20_D	23_D	0.576	1.00
281_F	284_R	0.575	1.00
253_G	257_D	0.575	1.00
99_G	104_T	0.575	1.00
34_V	208_L	0.575	1.00
11_K	19_V	0.573	1.00
256_A	261_F	0.572	1.00
259_E	265_L	0.570	1.00
180_L	184_L	0.568	1.00
113_D	120_A	0.568	1.00
282_G	285_P	0.568	1.00
82_Q	164_N	0.567	1.00
290_L	294_S	0.566	1.00
27_L	32_L	0.566	1.00
245_V	252_R	0.565	1.00
304_A	307_T	0.565	1.00
13_Y	55_A	0.564	1.00
298_H	305_R	0.563	1.00
87_Y	95_N	0.563	1.00
195_Q	234_F	0.562	1.00
126_E	210_D	0.561	1.00
247_V	279_L	0.561	1.00
145_I	201_L	0.560	1.00
111_I	114_R	0.558	1.00
119_A	122_L	0.557	1.00
113_D	116_A	0.555	1.00
272_S	275_V	0.554	1.00
250_R	255_V	0.553	1.00
245_V	281_F	0.553	1.00
87_Y	151_R	0.553	1.00
80_V	148_A	0.552	1.00
181_H	184_L	0.552	1.00
260_G	266_P	0.552	1.00
24_L	213_V	0.550	1.00
190_Y	198_A	0.548	1.00
217_A	222_L	0.545	1.00
114_R	118_A	0.545	1.00
249_D	253_G	0.543	1.00
285_P	288_V	0.543	1.00
122_L	173_M	0.543	1.00
106_Y	109_A	0.542	1.00
125_T	128_L	0.542	1.00
175_A	179_K	0.542	1.00
306_V	313_G	0.542	1.00
11_K	44_T	0.541	1.00
249_D	256_A	0.541	1.00
230_F	233_G	0.540	1.00
149_L	184_L	0.538	1.00
262_A	269_G	0.538	1.00
17_A	21_G	0.538	1.00
204_R	215_Q	0.537	1.00
285_P	289_L	0.536	1.00
26_V	189_V	0.535	1.00
238_P	244_P	0.535	1.00
170_R	197_E	0.535	1.00
254_L	262_A	0.534	1.00
308_V	319_H	0.533	1.00
121_T	179_K	0.533	1.00
256_A	263_H	0.533	1.00
287_D	290_L	0.533	1.00
248_R	257_D	0.531	1.00
115_V	118_A	0.530	1.00
281_F	285_P	0.529	1.00
123_G	176_E	0.528	1.00
241_N	247_V	0.528	1.00
290_L	329_V	0.528	1.00
304_A	308_V	0.527	1.00
291_A	300_E	0.527	1.00
252_R	257_D	0.527	1.00
91_T	132_P	0.526	1.00
67_V	77_I	0.526	1.00
221_Q	224_D	0.525	1.00
127_L	139_E	0.524	1.00
274_L	279_L	0.524	1.00
207_V	226_P	0.523	1.00
305_R	308_V	0.523	1.00
11_K	18_A	0.522	1.00
93_A	96_M	0.522	1.00
312_L	315_Q	0.521	1.00
61_R	68_T	0.521	1.00
284_R	288_V	0.520	1.00
263_H	267_D	0.519	1.00
219_P	223_Y	0.519	1.00
83_N	140_R	0.518	1.00
17_A	57_A	0.518	1.00
300_E	304_A	0.517	1.00
288_V	327_L	0.515	1.00
286_E	289_L	0.515	1.00
91_T	95_N	0.515	1.00
288_V	291_A	0.514	1.00
259_E	264_P	0.514	1.00
259_E	266_P	0.514	1.00
66_D	70_S	0.513	1.00
316_L	319_H	0.513	1.00
314_E	317_L	0.512	1.00
177_L	201_L	0.510	1.00
231_V	234_F	0.510	1.00
80_V	144_A	0.508	1.00
260_G	264_P	0.507	1.00
276_D	280_T	0.505	1.00
298_H	313_G	0.502	0.99
251_P	254_L	0.502	0.99
14_D	18_A	0.502	0.99
299_E	305_R	0.501	0.99
181_H	203_D	0.500	0.99
301_S	305_R	0.500	0.99
232_A	236_G	0.500	0.99

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1v43A	2	0.9156	100	0.165	Contact Map
2it1A	1	0.9499	100	0.171	Contact Map
2yyzA	1	0.9393	100	0.178	Contact Map
1g291	4	0.9472	100	0.179	Contact Map
1oxxK	1	0.9024	100	0.185	Contact Map
3rlfA	2	0.9631	100	0.186	Contact Map
3fvqA	2	0.9103	100	0.205	Contact Map
4tquS	2	0.9525	100	0.212	Contact Map
3d31A	2	0.9024	100	0.215	Contact Map
1z47A	2	0.8971	100	0.219	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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