Q9HHP2 - HALSA - GREMLIN Contacts

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Q9HHP2 - Vng6298c

UniProt:	Q9HHP2	Sequences: MVTQQSRREAVACVESGDTVGIGGFVATGIPEAVLAALGDRYERTRAPQDLTLYQPAAEGDRQGHGVSHLVQEGMLERTIASHWGFTPDLMAAVVNNEIEAYNLPFGVLDHLLRDTAAGKPGTITHVGLDTFVDPRRDGGKANAVTSEDLVERVTLNGTEYLFYHAVPIDVAVIRGTTADEHGNVTMEREALASNMLALAQAAHNTGGRVIAQVERVTSAGTLAPHDVAVPGVVVDSVVEASPEDHPQTYGSAYDPAHSGTVKPPTPSTDPLPIDERTIIARRAAMELDAGAVINLGVGIPELVSTAAAEGGVGDAITETVESGPVGGAASGGIEFGTAVNHDALVSSPQQFDFYDGGGLDVGFLGMAQVDAQGNVNVSRFGSQFPGCGGFINITQNAAAVVFCGTLTTGGLSVAVADGTITVTSEGAHSKFVEDVEHVTFSADHALETDQSVVYVTERAVFELTPDGLTLTEVAPGIDPGAVIAQLGFDPAVADPLGVMPARLFADAPPDLTDVV	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	516 (463)
Sequences:	1033 (668)
Seq/√Len:	31.1

ECOLI - YDIF
HALSA - Q9HHP2

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
481_G	485_A	5.993	1.00
176_G	185_V	5.637	1.00
185_V	212_A	4.761	1.00
474_V	480_P	4.667	1.00
34_V	173_V	4.644	1.00
73_E	98_E	4.490	1.00
15_E	18_D	4.391	1.00
181_E	219_S	3.901	1.00
126_H	159_T	3.857	1.00
136_R	153_R	3.816	1.00
372_A	434_E	3.468	1.00
39_G	72_Q	3.434	1.00
16_S	47_A	3.416	1.00
371_D	375_N	3.371	1.00
494_A	497_L	3.369	1.00
77_E	100_E	3.170	1.00
189_R	215_E	3.143	1.00
223_L	228_V	3.093	1.00
70_L	75_M	3.082	1.00
92_A	96_N	3.064	1.00
174_I	230_V	3.012	1.00
115_D	123_T	2.993	1.00
8_R	40_D	2.969	1.00
152_E	157_N	2.930	1.00
174_I	212_A	2.893	1.00
434_E	488_G	2.868	1.00
178_T	218_T	2.846	1.00
33_A	245_D	2.764	1.00
136_R	160_E	2.759	1.00
369_Q	437_E	2.631	1.00
5_Q	237_S	2.627	1.00
356_D	393_N	2.621	1.00
54_Y	167_V	2.567	1.00
212_A	230_V	2.554	1.00
127_V	397_N	2.537	1.00
182_H	220_A	2.506	0.99
185_V	230_V	2.425	0.99
463_E	472_T	2.407	0.99
465_T	470_T	2.401	0.99
124_I	154_V	2.398	0.99
20_V	173_V	2.384	0.99
252_S	335_E	2.368	0.99
470_T	494_A	2.338	0.99
30_I	35_L	2.327	0.99
78_R	100_E	2.314	0.99
6_S	9_E	2.304	0.99
141_K	149_D	2.276	0.99
17_G	50_D	2.261	0.99
430_S	488_G	2.245	0.99
14_V	38_L	2.210	0.99
172_A	203_A	2.176	0.98
93_A	98_E	2.131	0.98
153_R	160_E	2.130	0.98
115_D	120_K	2.099	0.98
5_Q	11_V	2.064	0.98
7_R	37_A	2.052	0.98
122_G	163_F	2.029	0.98
178_T	188_E	2.019	0.98
108_V	125_T	1.993	0.97
454_V	472_T	1.971	0.97
178_T	216_R	1.952	0.97
493_V	497_L	1.940	0.97
224_A	227_D	1.931	0.97
370_V	432_F	1.928	0.97
52_T	80_I	1.915	0.97
487_L	491_P	1.911	0.97
116_T	167_V	1.877	0.96
38_L	173_V	1.871	0.96
36_A	245_D	1.863	0.96
155_T	160_E	1.855	0.96
186_T	223_L	1.817	0.95
11_V	14_V	1.802	0.95
463_E	470_T	1.792	0.95
209_R	212_A	1.788	0.95
430_S	486_Q	1.778	0.95
130_D	445_H	1.770	0.95
209_R	237_S	1.753	0.94
320_T	355_Y	1.751	0.94
18_D	170_D	1.748	0.94
182_H	343_D	1.723	0.94
104_L	150_L	1.656	0.92
97_N	144_A	1.632	0.92
4_Q	217_V	1.626	0.92
9_E	12_A	1.624	0.92
470_T	492_A	1.615	0.91
480_P	483_V	1.610	0.91
219_S	222_T	1.596	0.91
163_F	166_A	1.576	0.90
187_M	196_M	1.570	0.90
481_G	490_D	1.569	0.90
18_D	171_V	1.566	0.90
130_D	448_E	1.559	0.90
50_D	77_E	1.544	0.89
462_F	471_L	1.536	0.89
157_N	165_H	1.513	0.88
480_P	484_I	1.508	0.88
176_G	212_A	1.500	0.88
347_S	350_Q	1.497	0.88
21_G	199_L	1.493	0.88
124_I	163_F	1.486	0.88
175_R	241_A	1.472	0.87
73_E	96_N	1.458	0.86
76_L	90_L	1.451	0.86
199_L	203_A	1.449	0.86
468_G	492_A	1.448	0.86
137_R	439_V	1.443	0.86
301_P	366_G	1.442	0.86
11_V	38_L	1.422	0.85
465_T	468_G	1.412	0.85
16_S	49_Q	1.405	0.84
388_C	440_T	1.399	0.84
465_T	494_A	1.398	0.84
115_D	118_A	1.398	0.84
476_P	499_V	1.363	0.82
368_A	381_F	1.360	0.82
139_G	143_N	1.354	0.82
169_I	203_A	1.351	0.82
467_D	492_A	1.347	0.82
370_V	376_V	1.331	0.81
89_D	92_A	1.321	0.80
22_I	59_E	1.319	0.80
432_F	469_L	1.318	0.80
278_T	311_G	1.309	0.80
370_V	469_L	1.306	0.80
278_T	310_E	1.290	0.79
173_V	211_I	1.286	0.79
233_V	326_V	1.284	0.78
482_A	486_Q	1.282	0.78
461_V	473_E	1.281	0.78
409_T	426_E	1.276	0.78
111_H	120_K	1.269	0.78
14_V	173_V	1.264	0.77
21_G	169_I	1.259	0.77
409_T	428_A	1.258	0.77
121_P	161_Y	1.246	0.76
483_V	493_V	1.242	0.76
38_L	75_M	1.241	0.76
474_V	497_L	1.237	0.76
171_V	203_A	1.234	0.76
288_L	294_I	1.232	0.75
367_M	376_V	1.228	0.75
181_E	222_T	1.226	0.75
52_T	78_R	1.224	0.75
151_V	162_L	1.223	0.75
130_D	444_D	1.218	0.75
277_R	300_I	1.218	0.75
211_I	239_V	1.217	0.75
62_R	298_V	1.215	0.74
235_V	238_V	1.209	0.74
124_I	156_L	1.207	0.74
172_A	212_A	1.204	0.74
171_V	209_R	1.199	0.73
33_A	36_A	1.193	0.73
490_D	493_V	1.193	0.73
258_H	335_E	1.193	0.73
14_V	18_D	1.188	0.73
426_E	486_Q	1.183	0.72
408_T	458_E	1.176	0.72
402_V	456_V	1.170	0.72
367_M	370_V	1.165	0.71
110_D	348_S	1.157	0.71
25_F	323_S	1.154	0.71
280_I	300_I	1.150	0.70
289_D	292_A	1.136	0.69
369_Q	433_V	1.135	0.69
449_T	463_E	1.132	0.69
13_C	18_D	1.131	0.69
21_G	113_L	1.128	0.69
367_M	405_G	1.128	0.69
34_V	38_L	1.122	0.68
26_V	57_A	1.119	0.68
39_G	69_H	1.115	0.68
460_A	497_L	1.114	0.68
13_C	237_S	1.110	0.68
11_V	211_I	1.103	0.67
480_P	497_L	1.102	0.67
373_Q	444_D	1.100	0.67
459_R	486_Q	1.092	0.66
187_M	230_V	1.085	0.66
84_W	94_V	1.084	0.66
78_R	150_L	1.077	0.65
179_A	235_V	1.070	0.65
474_V	483_V	1.069	0.65
153_R	162_L	1.066	0.64
116_T	168_P	1.060	0.64
304_V	364_F	1.059	0.64
33_A	242_S	1.056	0.64
54_Y	80_I	1.056	0.64
25_F	298_V	1.052	0.63
287_E	454_V	1.042	0.63
81_A	86_F	1.038	0.62
283_R	473_E	1.037	0.62
5_Q	13_C	1.035	0.62
97_N	145_V	1.030	0.62
86_F	298_V	1.029	0.62
475_A	500_M	1.022	0.61
241_A	246_H	1.018	0.61
130_D	449_T	1.016	0.61
104_L	109_L	1.015	0.60
219_S	263_K	0.997	0.59
31_P	34_V	0.995	0.59
81_A	84_W	0.995	0.59
284_A	364_F	0.994	0.59
133_V	392_I	0.989	0.58
25_F	301_P	0.987	0.58
455_Y	464_L	0.975	0.57
103_N	388_C	0.972	0.57
155_T	158_G	0.967	0.57
277_R	303_L	0.964	0.56
434_E	490_D	0.964	0.56
278_T	282_R	0.958	0.56
229_A	347_S	0.957	0.56
354_F	359_G	0.957	0.56
52_T	77_E	0.955	0.56
255_D	258_H	0.953	0.56
445_H	449_T	0.950	0.55
281_A	304_V	0.940	0.55
33_A	241_A	0.939	0.54
181_E	220_A	0.939	0.54
175_R	246_H	0.938	0.54
71_V	93_A	0.938	0.54
16_S	50_D	0.936	0.54
313_V	316_A	0.935	0.54
364_F	404_C	0.918	0.53
282_R	311_G	0.916	0.53
53_L	76_L	0.915	0.53
459_R	482_A	0.915	0.53
157_N	163_F	0.912	0.52
178_T	186_T	0.909	0.52
26_V	55_Q	0.906	0.52
373_Q	435_D	0.905	0.52
492_A	495_D	0.905	0.52
188_E	216_R	0.902	0.51
6_S	10_A	0.898	0.51
193_A	347_S	0.897	0.51
48_P	228_V	0.892	0.51
282_R	456_V	0.881	0.50
68_S	298_V	0.881	0.50
195_N	349_P	0.877	0.49
364_F	395_T	0.877	0.49
113_L	199_L	0.875	0.49
426_E	430_S	0.874	0.49
252_S	258_H	0.874	0.49
272_L	303_L	0.874	0.49
325_P	339_A	0.871	0.49
129_L	134_D	0.870	0.49
29_G	194_S	0.870	0.49
82_S	103_N	0.865	0.48
492_A	496_P	0.859	0.48
185_V	235_V	0.858	0.48
470_T	495_D	0.858	0.48
482_A	485_A	0.857	0.48
59_E	106_F	0.857	0.48
465_T	492_A	0.856	0.48
68_S	86_F	0.854	0.48
483_V	496_P	0.854	0.48
26_V	302_E	0.852	0.47
172_A	199_L	0.851	0.47
263_K	341_N	0.851	0.47
11_V	37_A	0.850	0.47
408_T	426_E	0.849	0.47
111_H	123_T	0.849	0.47
292_A	362_V	0.847	0.47
298_V	302_E	0.844	0.47
25_F	57_A	0.843	0.47
478_I	482_A	0.843	0.47
218_T	265_P	0.842	0.47
363_G	401_V	0.840	0.46
21_G	53_L	0.840	0.46
376_V	388_C	0.835	0.46
319_E	330_A	0.835	0.46
169_I	172_A	0.835	0.46
346_V	351_Q	0.834	0.46
73_E	93_A	0.832	0.46
249_T	335_E	0.832	0.46
35_L	59_E	0.831	0.46
298_V	348_S	0.830	0.46
112_L	166_A	0.829	0.46
134_D	162_L	0.828	0.46
19_T	168_P	0.827	0.45
129_L	160_E	0.823	0.45
426_E	478_I	0.823	0.45
114_R	353_D	0.820	0.45
117_A	388_C	0.819	0.45
8_R	12_A	0.817	0.45
369_Q	435_D	0.812	0.44
301_P	404_C	0.812	0.44
252_S	255_D	0.812	0.44
200_A	230_V	0.810	0.44
218_T	221_G	0.808	0.44
31_P	35_L	0.807	0.44
298_V	323_S	0.806	0.44
274_I	311_G	0.804	0.44
425_S	428_A	0.804	0.44
276_E	458_E	0.803	0.44
270_D	273_P	0.803	0.44
460_A	483_V	0.799	0.43
106_F	348_S	0.798	0.43
57_A	86_F	0.796	0.43
177_T	188_E	0.792	0.43
13_C	209_R	0.791	0.43
305_S	308_A	0.791	0.43
104_L	140_G	0.790	0.42
302_E	305_S	0.787	0.42
135_P	138_D	0.787	0.42
56_P	113_L	0.783	0.42
32_E	69_H	0.783	0.42
284_A	456_V	0.782	0.42
68_S	81_A	0.781	0.42
454_V	463_E	0.779	0.42
112_L	167_V	0.779	0.42
37_A	40_D	0.778	0.42
106_F	110_D	0.776	0.41
459_R	478_I	0.774	0.41
185_V	214_V	0.770	0.41
55_Q	59_E	0.769	0.41
192_L	323_S	0.769	0.41
445_H	448_E	0.769	0.41
12_A	16_S	0.769	0.41
308_A	319_E	0.768	0.41
481_G	486_Q	0.768	0.41
466_P	494_A	0.767	0.41
321_V	325_P	0.766	0.41
179_A	217_V	0.766	0.41
217_V	240_E	0.766	0.41
29_G	66_G	0.765	0.41
100_E	146_T	0.763	0.40
254_Y	259_S	0.763	0.40
369_Q	458_E	0.759	0.40
4_Q	308_A	0.759	0.40
408_T	427_G	0.758	0.40
147_S	425_S	0.757	0.40
475_A	478_I	0.756	0.40
156_L	163_F	0.753	0.40
103_N	386_P	0.750	0.39
497_L	501_P	0.749	0.39
474_V	499_V	0.749	0.39
266_T	269_T	0.748	0.39
22_I	53_L	0.743	0.39
29_G	85_G	0.743	0.39
126_H	161_Y	0.741	0.39
362_V	402_V	0.740	0.39
34_V	45_T	0.740	0.39
400_A	454_V	0.740	0.39
106_F	195_N	0.740	0.39
441_F	464_L	0.740	0.39
61_D	68_S	0.739	0.39
120_K	125_T	0.739	0.39
93_A	96_N	0.734	0.38
35_L	55_Q	0.734	0.38
104_L	151_V	0.733	0.38
62_R	92_A	0.730	0.38
432_F	489_F	0.728	0.38
362_V	400_A	0.728	0.38
135_P	162_L	0.727	0.38
25_F	366_G	0.727	0.38
20_V	70_L	0.721	0.37
15_E	96_N	0.721	0.37
402_V	493_V	0.721	0.37
87_T	91_M	0.720	0.37
11_V	237_S	0.719	0.37
21_G	335_E	0.719	0.37
154_V	157_N	0.716	0.37
288_L	307_A	0.714	0.37
342_H	345_L	0.712	0.36
366_G	404_C	0.711	0.36
27_A	250_Y	0.711	0.36
5_Q	9_E	0.711	0.36
30_I	55_Q	0.710	0.36
456_V	472_T	0.710	0.36
83_H	302_E	0.709	0.36
258_H	331_S	0.708	0.36
149_D	165_H	0.707	0.36
101_A	339_A	0.706	0.36
106_F	310_E	0.706	0.36
30_I	250_Y	0.703	0.36
274_I	278_T	0.702	0.36
54_Y	116_T	0.702	0.36
28_T	191_A	0.700	0.36
50_D	53_L	0.700	0.36
179_A	214_V	0.698	0.35
392_I	440_T	0.698	0.35
305_S	319_E	0.698	0.35
56_P	109_L	0.696	0.35
10_A	239_V	0.696	0.35
185_V	238_V	0.696	0.35
114_R	118_A	0.695	0.35
23_G	85_G	0.695	0.35
471_L	493_V	0.695	0.35
435_D	481_G	0.694	0.35
38_L	70_L	0.691	0.35
29_G	215_E	0.691	0.35
26_V	59_E	0.691	0.35
312_G	316_A	0.690	0.35
213_Q	228_V	0.690	0.35
83_H	386_P	0.689	0.35
449_T	472_T	0.688	0.35
22_I	35_L	0.688	0.35
4_Q	488_G	0.687	0.35
20_V	199_L	0.684	0.34
193_A	350_Q	0.683	0.34
23_G	194_S	0.682	0.34
407_L	487_L	0.682	0.34
94_V	101_A	0.682	0.34
141_K	146_T	0.681	0.34
110_D	169_I	0.681	0.34
191_A	351_Q	0.681	0.34
302_E	368_A	0.680	0.34
216_R	240_E	0.678	0.34
12_A	289_D	0.678	0.34
331_S	338_T	0.677	0.34
80_I	109_L	0.676	0.34
146_T	149_D	0.675	0.34
140_G	150_L	0.675	0.34
378_V	440_T	0.675	0.34
125_T	167_V	0.672	0.34
378_V	381_F	0.671	0.33
27_A	61_D	0.668	0.33
492_A	497_L	0.667	0.33
152_E	155_T	0.667	0.33
55_Q	67_V	0.666	0.33
485_A	490_D	0.665	0.33
27_A	82_S	0.665	0.33
122_G	166_A	0.665	0.33
402_V	454_V	0.665	0.33
201_Q	350_Q	0.664	0.33
230_V	235_V	0.660	0.33
40_D	72_Q	0.659	0.33
301_P	332_G	0.656	0.32
404_C	439_V	0.654	0.32
467_D	483_V	0.653	0.32
112_L	116_T	0.652	0.32
287_E	400_A	0.651	0.32
288_L	304_V	0.650	0.32
483_V	497_L	0.650	0.32
311_G	341_N	0.649	0.32
215_E	243_P	0.647	0.32
79_T	99_I	0.647	0.32
304_V	456_V	0.647	0.32
179_A	223_L	0.644	0.32
185_V	209_R	0.643	0.31
239_V	347_S	0.643	0.31
45_T	467_D	0.641	0.31
442_S	449_T	0.640	0.31
62_R	257_A	0.638	0.31
79_T	94_V	0.636	0.31
230_V	270_D	0.634	0.31
348_S	393_N	0.633	0.31
101_A	202_A	0.631	0.31
379_S	440_T	0.631	0.31
495_D	498_G	0.630	0.31
447_L	465_T	0.627	0.30
69_H	250_Y	0.627	0.30
136_R	139_G	0.626	0.30
177_T	189_R	0.625	0.30
302_E	332_G	0.625	0.30
189_R	243_P	0.624	0.30
320_T	331_S	0.622	0.30
55_Q	250_Y	0.621	0.30
179_A	185_V	0.620	0.30
462_F	491_P	0.620	0.30
392_I	396_Q	0.618	0.30
441_F	446_A	0.617	0.30
484_I	491_P	0.617	0.30
138_D	385_F	0.616	0.30
156_L	435_D	0.615	0.30
32_E	39_G	0.615	0.30
34_V	203_A	0.614	0.29
319_E	325_P	0.614	0.29
195_N	348_S	0.613	0.29
29_G	192_L	0.613	0.29
444_D	467_D	0.612	0.29
460_A	474_V	0.611	0.29
25_F	59_E	0.610	0.29
460_A	478_I	0.609	0.29
472_T	494_A	0.609	0.29
56_P	348_S	0.608	0.29
117_A	202_A	0.607	0.29
112_L	168_P	0.607	0.29
444_D	447_L	0.605	0.29
186_T	218_T	0.605	0.29
288_L	476_P	0.605	0.29
108_V	376_V	0.604	0.29
87_T	111_H	0.604	0.29
59_E	67_V	0.603	0.29
242_S	245_D	0.601	0.29
33_A	214_V	0.601	0.29
74_G	93_A	0.600	0.29
388_C	392_I	0.599	0.28
85_G	166_A	0.598	0.28
308_A	393_N	0.598	0.28
104_L	113_L	0.597	0.28
19_T	52_T	0.597	0.28
373_Q	434_E	0.596	0.28
23_G	31_P	0.596	0.28
296_L	308_A	0.595	0.28
26_V	87_T	0.594	0.28
120_K	123_T	0.592	0.28
434_E	498_G	0.592	0.28
170_D	499_V	0.591	0.28
46_R	49_Q	0.589	0.28
62_R	68_S	0.589	0.28
77_E	428_A	0.589	0.28
77_E	498_G	0.588	0.28
17_G	20_V	0.586	0.28
179_A	212_A	0.586	0.28
55_Q	334_I	0.586	0.28
464_L	469_L	0.586	0.28
76_L	110_D	0.585	0.28
10_A	237_S	0.585	0.28
165_H	278_T	0.584	0.28
225_P	310_E	0.584	0.28
283_R	287_E	0.584	0.28
100_E	117_A	0.582	0.27
293_V	354_F	0.581	0.27
276_E	406_T	0.580	0.27
218_T	222_T	0.580	0.27
36_A	69_H	0.579	0.27
494_A	498_G	0.578	0.27
181_E	221_G	0.578	0.27
54_Y	113_L	0.577	0.27
106_F	331_S	0.576	0.27
113_L	350_Q	0.576	0.27
27_A	62_R	0.575	0.27
23_G	199_L	0.574	0.27
31_P	173_V	0.573	0.27
494_A	499_V	0.573	0.27
334_I	338_T	0.573	0.27
369_Q	471_L	0.572	0.27
133_V	172_A	0.572	0.27
38_L	78_R	0.572	0.27
152_E	312_G	0.571	0.27
10_A	38_L	0.571	0.27
19_T	54_Y	0.570	0.27
243_P	246_H	0.567	0.26
265_P	269_T	0.567	0.26
15_E	171_V	0.565	0.26
108_V	365_L	0.565	0.26
447_L	467_D	0.565	0.26
217_V	326_V	0.565	0.26
68_S	334_I	0.563	0.26
83_H	368_A	0.563	0.26
286_M	437_E	0.563	0.26
175_R	215_E	0.563	0.26
132_F	322_E	0.563	0.26
428_A	486_Q	0.563	0.26
174_I	182_H	0.563	0.26
11_V	47_A	0.562	0.26
8_R	37_A	0.562	0.26
478_I	486_Q	0.562	0.26
48_P	322_E	0.561	0.26
35_L	70_L	0.561	0.26
432_F	455_Y	0.559	0.26
320_T	456_V	0.559	0.26
190_E	313_V	0.559	0.26
300_I	303_L	0.557	0.26
119_G	266_T	0.556	0.26
48_P	477_G	0.556	0.26
196_M	230_V	0.555	0.26
69_H	293_V	0.555	0.26
56_P	110_D	0.553	0.26
331_S	393_N	0.553	0.26
29_G	87_T	0.552	0.25
93_A	285_A	0.552	0.25
138_D	142_A	0.551	0.25
55_Q	90_L	0.551	0.25
201_Q	326_V	0.549	0.25
138_D	141_K	0.549	0.25
67_V	121_P	0.548	0.25
425_S	448_E	0.548	0.25
373_Q	467_D	0.547	0.25
24_G	462_F	0.547	0.25
31_P	306_T	0.546	0.25
116_T	169_I	0.546	0.25
432_F	464_L	0.546	0.25
472_T	478_I	0.545	0.25
250_Y	334_I	0.545	0.25
326_V	346_V	0.545	0.25
294_I	362_V	0.545	0.25
56_P	82_S	0.545	0.25
447_L	466_P	0.545	0.25
98_E	291_G	0.544	0.25
295_N	352_F	0.544	0.25
23_G	339_A	0.543	0.25
14_V	197_L	0.543	0.25
275_D	278_T	0.542	0.25
32_E	106_F	0.542	0.25
85_G	386_P	0.541	0.25
20_V	50_D	0.541	0.25
442_S	445_H	0.540	0.25
181_E	483_V	0.539	0.25
126_H	204_H	0.539	0.25
38_L	238_V	0.539	0.25
85_G	384_Q	0.538	0.25
19_T	167_V	0.538	0.25
376_V	383_S	0.537	0.25
95_V	383_S	0.537	0.25
134_D	153_R	0.537	0.25
85_G	195_N	0.537	0.25
170_D	326_V	0.536	0.25
285_A	307_A	0.536	0.25
383_S	437_E	0.536	0.25
144_A	147_S	0.534	0.24
465_T	472_T	0.533	0.24
59_E	250_Y	0.533	0.24
58_A	61_D	0.533	0.24
174_I	209_R	0.532	0.24
50_D	145_V	0.532	0.24
141_K	440_T	0.531	0.24
85_G	197_L	0.531	0.24
479_D	483_V	0.531	0.24
29_G	338_T	0.531	0.24
263_K	343_D	0.530	0.24
368_A	440_T	0.530	0.24
6_S	373_Q	0.529	0.24
84_W	194_S	0.529	0.24
121_P	225_P	0.528	0.24
203_A	486_Q	0.528	0.24
57_A	85_G	0.528	0.24
249_T	258_H	0.528	0.24
364_F	401_V	0.527	0.24
159_T	400_A	0.527	0.24
17_G	49_Q	0.526	0.24
246_H	323_S	0.526	0.24
218_T	223_L	0.526	0.24
178_T	187_M	0.525	0.24
9_E	34_V	0.525	0.24
291_G	309_A	0.525	0.24
87_T	460_A	0.523	0.24
242_S	481_G	0.523	0.24
23_G	348_S	0.522	0.24
40_D	425_S	0.522	0.24
102_Y	141_K	0.522	0.24
364_F	402_V	0.521	0.24
319_E	335_E	0.521	0.24
11_V	444_D	0.521	0.24
30_I	241_A	0.520	0.24
353_D	458_E	0.520	0.24
305_S	339_A	0.520	0.24
71_V	82_S	0.520	0.24
8_R	76_L	0.520	0.24
48_P	484_I	0.519	0.24
46_R	435_D	0.518	0.23
283_R	461_V	0.518	0.23
428_A	444_D	0.518	0.23
80_I	202_A	0.518	0.23
77_E	160_E	0.517	0.23
460_A	472_T	0.517	0.23
100_E	202_A	0.516	0.23
134_D	190_E	0.516	0.23
164_Y	328_G	0.516	0.23
20_V	373_Q	0.513	0.23
20_V	433_V	0.513	0.23
89_D	93_A	0.512	0.23
163_F	298_V	0.512	0.23
25_F	246_H	0.512	0.23
134_D	160_E	0.512	0.23
111_H	356_D	0.512	0.23
49_Q	490_D	0.511	0.23
305_S	369_Q	0.511	0.23
22_I	70_L	0.511	0.23
55_Q	87_T	0.510	0.23
24_G	51_L	0.510	0.23
25_F	30_I	0.510	0.23
248_Q	254_Y	0.510	0.23
319_E	368_A	0.509	0.23
215_E	241_A	0.508	0.23
80_I	228_V	0.508	0.23
439_V	442_S	0.507	0.23
257_A	495_D	0.507	0.23
247_P	253_A	0.507	0.23
31_P	358_G	0.507	0.23
32_E	241_A	0.507	0.23
408_T	486_Q	0.506	0.23
435_D	490_D	0.505	0.23
102_Y	112_L	0.505	0.23
166_A	369_Q	0.505	0.23
85_G	108_V	0.505	0.23
25_F	32_E	0.505	0.23
118_A	305_S	0.504	0.23
30_I	59_E	0.504	0.23
320_T	462_F	0.503	0.23
137_R	442_S	0.503	0.23
204_H	469_L	0.503	0.23
358_G	365_L	0.502	0.23
372_A	435_D	0.502	0.23
464_L	477_G	0.502	0.23
131_T	310_E	0.502	0.23
20_V	34_V	0.502	0.23
28_T	388_C	0.501	0.22
11_V	15_E	0.500	0.22
34_V	211_I	0.500	0.22
20_V	148_E	0.500	0.22
70_L	333_G	0.500	0.22

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2ahuA	3	0.9767	100	0.316	Contact Map
4kgbA	2	0.8605	100	0.434	Contact Map
3k6mA	2	0.8643	100	0.441	Contact Map
3qliA	2	0.7733	100	0.603	Contact Map
2hj0A	2	0.7965	100	0.605	Contact Map
4eu9A	2	0.8217	100	0.612	Contact Map
1xr4A	2	0.814	100	0.612	Contact Map
2nvvA	2	0.7849	100	0.614	Contact Map
2g39A	2	0.7888	100	0.615	Contact Map
3gk7A	2	0.7713	100	0.619	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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