Q9HHN5 - HALSA - GREMLIN Contacts

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Q9HHN5 - Proton/sodium-glutamate symport protein

UniProt:	Q9HHN5	Sequences: MARFSGISKQELYSWEFKRVLSSRRSHSECDENATDTKQSSCVFETTPAYGIVSFTASISECCAMLNRLRDAWAAYRSVAIIYRIAVAFVLGSVCGLAVGAPAAQLEPLGTLFVRLLKMIIIPVVVFTLLMGARQLSPTRIGKIGGEVIALYLGTTAVAIAIGLLAGNLINPGVGLEVADAAVETTQAPDLGTVLMNVVPTNPIGAMANGDVLPTIFFTIALGISFAILQDEFEPGTPVHDGAQAVFKIAEAGSEAMFNVVWGVMEYGVIGVFALMATTFGEAGVDAILPFAKLIGALALAVVLHIGVTYLFVIQWGLLRESPRAFLAGAKEAMVTALSIRSSSGTLPVTMNNADENFGIDEEVYSFSLPLGATINMDGTAMYQGVAAIFAANLVGQTLTLAEQATVIVTALLASVGTAGVPGSGLIMLTLVLTQLGLPLEVVGMVAGVDPILDRLRTMNNVTGDLAVTTLVADWNDRIDRENTVWERTDD	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	491 (393)
Sequences:	6141 (3701)
Seq/√Len:	186.7

ECOLI - YDJN SSTT GLTP DCTA
BACSU - GLTT TCYP GLTP DCTA
HALSA - Q9HHN5

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
205_G	209_N	4.430	1.00
168_N	404_Q	3.089	1.00
198_V	217_F	3.039	1.00
244_Q	248_K	3.024	1.00
147_E	476_N	2.987	1.00
166_A	301_A	2.986	1.00
91_L	273_F	2.915	1.00
126_V	219_T	2.884	1.00
259_N	262_W	2.883	1.00
231_D	244_Q	2.800	1.00
130_L	250_A	2.740	1.00
107_E	111_T	2.712	1.00
352_N	356_E	2.643	1.00
95_C	273_F	2.629	1.00
347_L	369_L	2.619	1.00
112_L	199_V	2.616	1.00
84_R	266_E	2.604	1.00
361_D	478_R	2.574	1.00
245_A	252_A	2.536	1.00
126_V	130_L	2.487	1.00
109_L	274_A	2.463	1.00
356_E	362_E	2.433	1.00
127_F	253_G	2.430	1.00
474_D	481_R	2.399	1.00
400_T	403_E	2.385	1.00
171_N	174_V	2.335	1.00
222_L	256_A	2.253	1.00
361_D	473_A	2.239	1.00
299_A	456_L	2.234	1.00
334_M	463_T	2.214	1.00
80_A	83_Y	2.181	1.00
166_A	304_L	2.105	1.00
151_L	468_V	2.095	1.00
193_T	197_N	2.073	1.00
296_G	300_L	2.065	1.00
170_I	297_A	2.058	1.00
333_A	353_N	2.048	1.00
147_E	475_W	2.023	1.00
230_Q	243_A	1.991	1.00
94_V	98_A	1.971	1.00
246_V	249_I	1.960	1.00
201_T	205_G	1.946	1.00
86_A	90_V	1.939	1.00
88_A	273_F	1.888	1.00
391_A	442_V	1.864	1.00
146_G	150_A	1.863	1.00
135_Q	251_E	1.861	1.00
246_V	252_A	1.855	1.00
165_L	169_L	1.855	1.00
302_V	456_L	1.848	1.00
360_I	470_T	1.845	1.00
167_G	389_I	1.839	1.00
352_N	357_N	1.816	1.00
245_A	248_K	1.809	1.00
161_A	165_L	1.800	1.00
211_D	214_P	1.782	1.00
172_P	393_N	1.776	1.00
127_F	257_M	1.774	1.00
155_T	314_I	1.768	1.00
120_I	264_V	1.749	1.00
354_A	466_L	1.742	1.00
450_D	457_R	1.727	1.00
228_I	259_N	1.720	1.00
226_F	256_A	1.718	1.00
204_I	207_M	1.708	1.00
88_A	92_G	1.697	1.00
203_P	218_F	1.690	1.00
368_S	469_T	1.686	1.00
170_I	300_L	1.671	1.00
79_V	83_Y	1.659	1.00
289_L	293_K	1.635	1.00
325_A	328_A	1.618	1.00
246_V	256_A	1.616	1.00
315_Q	467_A	1.610	1.00
360_I	473_A	1.609	1.00
167_G	386_V	1.602	1.00
319_L	474_D	1.602	1.00
204_I	208_A	1.596	1.00
398_T	402_A	1.584	1.00
143_K	476_N	1.583	1.00
350_T	466_L	1.574	1.00
329_G	358_F	1.564	1.00
330_A	466_L	1.545	1.00
316_W	320_R	1.527	1.00
395_V	442_V	1.517	1.00
292_A	296_G	1.515	1.00
112_L	196_M	1.501	1.00
304_L	308_V	1.500	1.00
302_V	460_N	1.497	1.00
166_A	297_A	1.491	1.00
134_R	247_F	1.488	1.00
391_A	438_L	1.485	1.00
118_K	201_T	1.464	1.00
301_A	382_M	1.438	1.00
251_E	255_E	1.417	1.00
249_I	252_A	1.409	1.00
228_I	263_G	1.401	1.00
329_G	357_N	1.397	1.00
334_M	459_M	1.395	1.00
454_D	458_T	1.395	1.00
344_S	420_G	1.375	1.00
126_V	207_M	1.374	1.00
199_V	217_F	1.368	1.00
351_M	365_Y	1.360	1.00
225_S	260_V	1.359	1.00
95_C	99_V	1.348	1.00
111_T	115_R	1.346	1.00
401_L	405_A	1.344	1.00
119_M	218_F	1.341	1.00
177_E	396_G	1.339	1.00
83_Y	87_V	1.339	1.00
131_M	250_A	1.336	1.00
222_L	253_G	1.335	1.00
115_R	201_T	1.330	1.00
133_A	220_I	1.322	1.00
125_V	212_V	1.302	1.00
361_D	364_V	1.299	1.00
197_N	211_D	1.298	1.00
330_A	463_T	1.273	1.00
263_G	267_Y	1.270	1.00
164_L	404_Q	1.259	1.00
317_G	320_R	1.256	1.00
374_T	377_M	1.255	1.00
324_R	328_A	1.255	1.00
99_V	102_P	1.253	1.00
148_V	368_S	1.245	1.00
89_F	276_M	1.244	1.00
226_F	246_V	1.240	1.00
473_A	479_I	1.228	1.00
306_I	460_N	1.225	1.00
295_I	449_V	1.225	1.00
326_F	330_A	1.223	1.00
165_L	168_N	1.222	1.00
79_V	87_V	1.204	1.00
398_T	403_E	1.203	1.00
297_A	386_V	1.195	1.00
120_I	261_V	1.195	1.00
143_K	147_E	1.194	1.00
290_P	293_K	1.194	1.00
337_A	458_T	1.190	1.00
221_A	260_V	1.188	1.00
350_T	369_L	1.186	1.00
150_A	154_G	1.179	1.00
364_V	473_A	1.176	1.00
313_V	317_G	1.173	1.00
190_D	193_T	1.170	1.00
278_T	282_E	1.168	1.00
289_L	292_A	1.168	1.00
388_A	407_V	1.164	1.00
473_A	477_D	1.161	1.00
232_E	248_K	1.160	1.00
177_E	180_D	1.156	1.00
107_E	278_T	1.154	1.00
100_G	281_G	1.144	1.00
322_S	325_A	1.144	1.00
229_L	243_A	1.136	1.00
407_V	436_L	1.125	1.00
122_I	215_T	1.123	1.00
186_T	189_P	1.119	1.00
225_S	263_G	1.114	1.00
140_R	363_E	1.113	1.00
305_H	309_T	1.111	1.00
293_K	296_G	1.106	1.00
332_E	357_N	1.102	1.00
220_I	224_I	1.101	1.00
205_G	208_A	1.097	1.00
79_V	84_R	1.097	1.00
245_A	249_I	1.092	1.00
378_D	415_S	1.091	1.00
246_V	250_A	1.091	1.00
383_Y	450_D	1.090	1.00
262_W	352_N	1.087	1.00
473_A	478_R	1.086	1.00
229_L	252_A	1.085	1.00
347_L	373_A	1.085	1.00
257_M	261_V	1.082	1.00
109_L	267_Y	1.081	1.00
426_L	447_A	1.076	1.00
152_Y	368_S	1.073	1.00
161_A	408_I	1.069	1.00
80_A	84_R	1.064	1.00
474_D	477_D	1.064	1.00
321_E	479_I	1.060	1.00
248_K	251_E	1.060	1.00
350_T	462_V	1.055	1.00
346_T	350_T	1.053	1.00
112_L	116_L	1.052	1.00
94_V	97_L	1.050	1.00
161_A	405_A	1.048	1.00
144_I	364_V	1.047	1.00
405_A	409_V	1.043	1.00
173_G	393_N	1.033	1.00
341_R	451_P	1.032	1.00
295_I	452_I	1.024	1.00
380_T	425_G	1.022	1.00
229_L	256_A	1.022	1.00
383_Y	457_R	1.019	1.00
243_A	252_A	1.017	1.00
354_A	369_L	1.016	1.00
90_V	94_V	1.012	1.00
199_V	202_N	1.011	1.00
95_C	277_A	1.005	0.99
155_T	378_D	1.002	0.99
203_P	208_A	0.999	0.99
286_D	289_L	0.999	0.99
248_K	252_A	0.991	0.99
110_G	275_L	0.990	0.99
127_F	131_M	0.985	0.99
154_G	158_V	0.983	0.99
259_N	263_G	0.983	0.99
354_A	360_I	0.981	0.99
320_R	474_D	0.980	0.99
129_L	216_I	0.978	0.99
311_L	315_Q	0.969	0.99
267_Y	270_I	0.969	0.99
300_L	303_V	0.956	0.99
153_L	157_A	0.952	0.99
203_P	206_A	0.951	0.99
360_I	365_Y	0.949	0.99
300_L	304_L	0.949	0.99
196_M	199_V	0.943	0.99
163_G	385_G	0.943	0.99
84_R	88_A	0.942	0.99
346_T	349_V	0.941	0.99
321_E	325_A	0.940	0.99
166_A	170_I	0.938	0.99
187_Q	190_D	0.933	0.99
389_I	404_Q	0.932	0.99
384_Q	429_L	0.929	0.99
328_A	331_K	0.924	0.99
422_P	454_D	0.921	0.99
329_G	353_N	0.919	0.99
315_Q	321_E	0.915	0.99
101_A	104_A	0.914	0.99
343_S	461_N	0.912	0.99
224_I	228_I	0.909	0.99
110_G	271_G	0.908	0.99
298_L	386_V	0.904	0.99
333_A	346_T	0.903	0.99
376_N	465_D	0.902	0.99
414_A	432_V	0.901	0.99
102_P	105_Q	0.901	0.99
217_F	221_A	0.900	0.99
243_A	247_F	0.900	0.99
353_N	357_N	0.897	0.99
231_D	243_A	0.894	0.99
305_H	382_M	0.888	0.99
189_P	193_T	0.888	0.99
293_K	393_N	0.884	0.99
430_T	443_V	0.882	0.99
221_A	263_G	0.882	0.99
91_L	95_C	0.880	0.99
95_C	106_L	0.879	0.99
307_G	312_F	0.878	0.99
338_L	455_R	0.877	0.99
277_A	281_G	0.877	0.99
329_G	333_A	0.872	0.99
127_F	250_A	0.872	0.99
162_I	304_L	0.871	0.99
226_F	250_A	0.871	0.99
219_T	223_G	0.869	0.98
333_A	350_T	0.868	0.98
192_G	196_M	0.868	0.98
308_V	312_F	0.865	0.98
232_E	255_E	0.865	0.98
401_L	404_Q	0.865	0.98
383_Y	453_L	0.864	0.98
191_L	195_L	0.863	0.98
326_F	466_L	0.861	0.98
354_A	365_Y	0.861	0.98
157_A	161_A	0.860	0.98
115_R	118_K	0.860	0.98
196_M	200_P	0.859	0.98
99_V	106_L	0.859	0.98
106_L	277_A	0.858	0.98
299_A	303_V	0.854	0.98
164_L	168_N	0.849	0.98
314_I	471_L	0.848	0.98
331_K	335_V	0.848	0.98
120_I	260_V	0.845	0.98
298_L	453_L	0.845	0.98
202_N	206_A	0.845	0.98
303_V	307_G	0.845	0.98
312_F	327_L	0.845	0.98
130_L	226_F	0.845	0.98
195_L	199_V	0.844	0.98
106_L	274_A	0.842	0.98
222_L	260_V	0.838	0.98
377_M	465_D	0.837	0.98
249_I	253_G	0.837	0.98
295_I	453_L	0.835	0.98
326_F	470_T	0.832	0.98
100_G	103_A	0.828	0.98
131_M	251_E	0.828	0.98
336_T	346_T	0.825	0.98
474_D	479_I	0.823	0.98
294_L	446_V	0.817	0.98
193_T	196_M	0.816	0.98
426_L	443_V	0.815	0.98
336_T	349_V	0.812	0.98
308_V	313_V	0.808	0.98
230_Q	247_F	0.806	0.98
113_F	268_G	0.804	0.98
387_A	446_V	0.804	0.98
373_A	465_D	0.803	0.97
254_S	258_F	0.797	0.97
399_L	403_E	0.796	0.97
218_F	222_L	0.795	0.97
207_M	218_F	0.793	0.97
375_I	416_V	0.792	0.97
257_M	264_V	0.792	0.97
337_A	462_V	0.791	0.97
273_F	277_A	0.790	0.97
206_A	218_F	0.790	0.97
163_G	386_V	0.790	0.97
364_V	368_S	0.789	0.97
95_C	102_P	0.789	0.97
207_M	214_P	0.788	0.97
111_T	196_M	0.788	0.97
105_Q	108_P	0.786	0.97
194_V	200_P	0.784	0.97
309_T	312_F	0.784	0.97
130_L	219_T	0.783	0.97
384_Q	426_L	0.779	0.97
262_W	266_E	0.779	0.97
128_T	254_S	0.779	0.97
388_A	432_V	0.778	0.97
175_G	178_V	0.776	0.97
291_F	294_L	0.772	0.97
473_A	480_D	0.772	0.97
144_I	472_V	0.771	0.97
294_L	383_Y	0.767	0.97
113_F	267_Y	0.766	0.97
197_N	200_P	0.766	0.97
102_P	106_L	0.765	0.97
189_P	197_N	0.756	0.96
298_L	302_V	0.756	0.96
341_R	454_D	0.754	0.96
116_L	199_V	0.753	0.96
244_Q	247_F	0.752	0.96
190_D	194_V	0.751	0.96
395_V	441_E	0.750	0.96
268_G	271_G	0.749	0.96
99_V	277_A	0.749	0.96
261_V	338_L	0.747	0.96
294_L	453_L	0.741	0.96
430_T	434_T	0.740	0.96
159_A	305_H	0.740	0.96
134_R	227_A	0.735	0.96
380_T	418_T	0.734	0.96
380_T	384_Q	0.734	0.96
150_A	153_L	0.733	0.96
85_I	268_G	0.729	0.96
171_N	393_N	0.727	0.95
202_N	218_F	0.726	0.95
157_A	412_L	0.726	0.95
255_E	259_N	0.726	0.95
243_A	256_A	0.726	0.95
315_Q	319_L	0.726	0.95
136_L	144_I	0.723	0.95
297_A	300_L	0.717	0.95
336_T	340_I	0.716	0.95
229_L	255_E	0.713	0.95
139_T	142_G	0.713	0.95
333_A	349_V	0.711	0.95
104_A	281_G	0.709	0.95
426_L	453_L	0.706	0.95
406_T	436_L	0.706	0.95
81_I	84_R	0.706	0.95
130_L	222_L	0.704	0.95
294_L	386_V	0.704	0.95
301_A	386_V	0.703	0.95
325_A	329_G	0.701	0.95
131_M	247_F	0.700	0.94
130_L	253_G	0.700	0.94
78_S	83_Y	0.699	0.94
420_G	423_G	0.692	0.94
116_L	221_A	0.690	0.94
272_V	422_P	0.688	0.94
371_L	375_I	0.688	0.94
182_A	185_T	0.688	0.94
194_V	197_N	0.685	0.94
87_V	91_L	0.684	0.94
369_L	469_T	0.684	0.94
402_A	406_T	0.684	0.94
92_G	277_A	0.682	0.94
350_T	465_D	0.681	0.94
217_F	267_Y	0.679	0.94
175_G	293_K	0.678	0.94
222_L	246_V	0.677	0.93
294_L	302_V	0.676	0.93
168_N	401_L	0.675	0.93
162_I	301_A	0.674	0.93
166_A	300_L	0.673	0.93
384_Q	418_T	0.673	0.93
115_R	197_N	0.673	0.93
101_A	281_G	0.672	0.93
155_T	159_A	0.668	0.93
404_Q	408_I	0.668	0.93
408_I	411_A	0.667	0.93
232_E	243_A	0.666	0.93
166_A	169_L	0.665	0.93
140_R	145_G	0.663	0.93
411_A	428_M	0.662	0.93
295_I	299_A	0.660	0.93
410_T	435_Q	0.660	0.93
166_A	296_G	0.659	0.93
112_L	217_F	0.657	0.92
252_A	255_E	0.657	0.92
203_P	210_G	0.656	0.92
373_A	377_M	0.655	0.92
152_Y	305_H	0.654	0.92
230_Q	244_Q	0.654	0.92
105_Q	109_L	0.653	0.92
377_M	418_T	0.653	0.92
153_L	416_V	0.653	0.92
140_R	478_R	0.650	0.92
385_G	411_A	0.648	0.92
478_R	481_R	0.647	0.92
318_L	471_L	0.644	0.92
416_V	465_D	0.643	0.92
146_G	149_I	0.642	0.92
100_G	104_A	0.641	0.91
271_G	275_L	0.640	0.91
388_A	392_A	0.638	0.91
321_E	329_G	0.637	0.91
148_V	472_V	0.632	0.91
152_Y	468_V	0.631	0.91
206_A	210_G	0.631	0.91
194_V	199_V	0.631	0.91
152_Y	465_D	0.630	0.91
307_G	313_V	0.629	0.91
143_K	146_G	0.626	0.91
362_E	366_S	0.625	0.90
259_N	266_E	0.625	0.90
89_F	272_V	0.625	0.90
229_L	232_E	0.624	0.90
158_V	162_I	0.622	0.90
316_W	323_P	0.622	0.90
291_F	295_I	0.621	0.90
202_N	205_G	0.621	0.90
399_L	407_V	0.620	0.90
425_G	432_V	0.620	0.90
124_V	216_I	0.618	0.90
337_A	454_D	0.617	0.90
268_G	340_I	0.616	0.90
270_I	274_A	0.616	0.90
116_L	267_Y	0.615	0.90
251_E	254_S	0.615	0.90
349_V	352_N	0.612	0.90
380_T	457_R	0.612	0.90
351_M	369_L	0.609	0.89
420_G	424_S	0.608	0.89
252_A	256_A	0.608	0.89
392_A	397_Q	0.607	0.89
103_A	281_G	0.606	0.89
100_G	105_Q	0.606	0.89
293_K	297_A	0.605	0.89
418_T	428_M	0.604	0.89
196_M	202_N	0.604	0.89
361_D	365_Y	0.604	0.89
164_L	408_I	0.603	0.89
163_G	382_M	0.603	0.89
138_P	145_G	0.602	0.89
92_G	96_G	0.602	0.89
321_E	480_D	0.601	0.89
344_S	373_A	0.600	0.89
437_G	441_E	0.599	0.88
155_T	375_I	0.596	0.88
294_L	387_A	0.593	0.88
95_C	98_A	0.593	0.88
156_T	381_A	0.593	0.88
226_F	247_F	0.593	0.88
317_G	322_S	0.591	0.88
246_V	253_G	0.590	0.88
305_H	378_D	0.589	0.88
337_A	459_M	0.588	0.88
84_R	270_I	0.585	0.87
247_F	251_E	0.584	0.87
358_F	470_T	0.584	0.87
326_F	467_A	0.584	0.87
387_A	450_D	0.583	0.87
384_Q	388_A	0.582	0.87
378_D	464_G	0.582	0.87
119_M	260_V	0.582	0.87
207_M	215_T	0.582	0.87
388_A	391_A	0.581	0.87
311_L	314_I	0.581	0.87
346_T	373_A	0.581	0.87
330_A	350_T	0.580	0.87
403_E	406_T	0.579	0.87
163_G	383_Y	0.579	0.87
363_E	478_R	0.578	0.87
477_D	482_E	0.576	0.87
289_L	295_I	0.575	0.86
442_V	445_M	0.574	0.86
402_A	405_A	0.574	0.86
418_T	425_G	0.574	0.86
116_L	264_V	0.574	0.86
360_I	469_T	0.573	0.86
326_F	463_T	0.572	0.86
249_I	256_A	0.571	0.86
89_F	455_R	0.570	0.86
439_P	442_V	0.570	0.86
266_E	270_I	0.569	0.86
158_V	161_A	0.569	0.86
97_L	280_F	0.567	0.86
109_L	270_I	0.566	0.86
341_R	345_G	0.564	0.85
159_A	382_M	0.564	0.85
140_R	143_K	0.564	0.85
398_T	401_L	0.562	0.85
313_V	316_W	0.560	0.85
81_I	96_G	0.557	0.85
117_L	336_T	0.556	0.85
364_V	478_R	0.556	0.85
194_V	198_V	0.554	0.84
346_T	462_V	0.552	0.84
104_A	282_E	0.549	0.84
208_A	211_D	0.547	0.84
162_I	309_T	0.544	0.83
120_I	124_V	0.544	0.83
170_I	293_K	0.543	0.83
103_A	278_T	0.543	0.83
326_F	358_F	0.542	0.83
160_I	412_L	0.542	0.83
381_A	412_L	0.542	0.83
425_G	429_L	0.541	0.83
468_V	471_L	0.540	0.83
328_A	332_E	0.540	0.83
341_R	459_M	0.540	0.83
379_G	460_N	0.539	0.83
391_A	428_M	0.536	0.82
121_I	424_S	0.536	0.82
121_I	445_M	0.536	0.82
95_C	103_A	0.536	0.82
391_A	433_L	0.535	0.82
94_V	101_A	0.535	0.82
441_E	444_G	0.535	0.82
380_T	454_D	0.535	0.82
139_T	228_I	0.534	0.82
406_T	410_T	0.533	0.82
395_V	439_P	0.532	0.82
244_Q	249_I	0.531	0.82
144_I	476_N	0.531	0.82
115_R	196_M	0.529	0.82
330_A	334_M	0.529	0.82
299_A	302_V	0.529	0.82
470_T	479_I	0.528	0.81
212_V	380_T	0.528	0.81
131_M	135_Q	0.527	0.81
225_S	229_L	0.527	0.81
301_A	305_H	0.526	0.81
185_T	188_A	0.526	0.81
301_A	309_T	0.526	0.81
97_L	285_V	0.525	0.81
380_T	453_L	0.525	0.81
179_A	182_A	0.524	0.81
469_T	473_A	0.524	0.81
136_L	469_T	0.524	0.81
122_I	207_M	0.524	0.81
384_Q	415_S	0.523	0.81
415_S	427_I	0.523	0.81
423_G	427_I	0.521	0.81
112_L	267_Y	0.520	0.80
354_A	465_D	0.519	0.80
108_P	192_G	0.519	0.80
312_F	315_Q	0.517	0.80
229_L	259_N	0.514	0.80
122_I	212_V	0.513	0.80
273_F	284_G	0.513	0.80
403_E	437_G	0.512	0.79
461_N	465_D	0.510	0.79
471_L	475_W	0.509	0.79
356_E	365_Y	0.509	0.79
187_Q	191_L	0.509	0.79
190_D	198_V	0.506	0.79
324_R	327_L	0.505	0.79
93_S	280_F	0.505	0.79
311_L	467_A	0.504	0.78
428_M	438_L	0.503	0.78
407_V	411_A	0.503	0.78
121_I	218_F	0.503	0.78
124_V	257_M	0.502	0.78
475_W	479_I	0.502	0.78
394_L	445_M	0.501	0.78
82_I	86_A	0.501	0.78
312_F	333_A	0.501	0.78
463_T	467_A	0.500	0.78
295_I	425_G	0.500	0.78

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2nwlA	3	0.7943	100	0.241	Contact Map
3zuxA	1	0.5967	52.1	0.97	Contact Map
3wdoA	1	0.1446	39	0.972	Contact Map
2kogA	1	0.1955	27.7	0.974	Contact Map
2m8rA	1	0.1976	23.4	0.975	Contact Map
3hzqA	3	0.1405	22.9	0.975	Contact Map
4xt1A	1	0.0387	20.1	0.976	Contact Map
4tkrA	2	0.3544	19.5	0.976	Contact Map
3ne5A	3	0.5193	18.9	0.976	Contact Map
4czbA	2	0.5418	18.2	0.976	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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