FDRA - ECOLI - GREMLIN Contacts

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FDRA - Protein FdrA

UniProt:	Q47208	Sequences: MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTGFWHDDFNNATPNDICVAIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQALTQVRRWDSACQKLPDANLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMIAGTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAIAPVSSGFICGLYTGGTLAAEAAGLLAGHLGVEADDTHQHGMMLDADSHQIIDLGDDFYTVGRPHPMIDPTLRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIHPLSPAAQQHTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG13399
Length:	555 (439)
Sequences:	1855 (1445)
Seq/√Len:	69.0

ECOLI - FDRA YAHF PKA
SULSO - Q97XD9

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
107_R	110_S	4.677	1.00
332_F	411_R	4.566	1.00
138_L	166_K	4.247	1.00
106_R	110_S	4.175	1.00
307_E	323_N	3.921	1.00
74_D	78_A	3.625	1.00
195_N	254_E	3.562	1.00
135_N	158_Q	3.541	1.00
388_P	392_I	3.524	1.00
114_K	118_A	3.452	1.00
111_A	118_A	3.377	1.00
125_V	133_L	3.375	1.00
311_L	323_N	3.214	1.00
169_L	237_G	3.199	1.00
109_D	136_Q	3.081	1.00
78_A	81_I	2.967	1.00
121_A	137_A	2.731	1.00
125_V	129_Y	2.727	1.00
74_D	80_A	2.716	1.00
135_N	139_D	2.660	1.00
265_E	268_R	2.609	1.00
157_I	161_T	2.576	1.00
262_P	268_R	2.548	1.00
152_T	156_E	2.481	1.00
137_A	142_L	2.394	1.00
135_N	162_R	2.374	1.00
92_L	111_A	2.354	1.00
146_M	159_L	2.307	1.00
310_R	316_S	2.265	1.00
135_N	165_E	2.250	1.00
197_G	221_T	2.223	1.00
221_T	253_S	2.192	1.00
388_P	393_D	2.176	1.00
372_S	376_I	2.152	1.00
433_S	437_K	2.137	1.00
78_A	82_M	2.130	1.00
262_P	265_E	2.129	1.00
401_I	413_L	2.114	1.00
123_I	133_L	2.112	1.00
367_M	406_A	2.100	1.00
364_H	407_K	2.098	1.00
171_M	178_S	2.071	1.00
298_N	301_F	2.056	1.00
250_D	253_S	2.037	1.00
268_R	273_N	2.007	1.00
469_A	473_D	1.993	1.00
269_L	273_N	1.991	1.00
121_A	142_L	1.990	1.00
74_D	81_I	1.971	1.00
76_G	79_Q	1.967	1.00
330_S	411_R	1.946	1.00
134_A	144_V	1.927	1.00
66_V	69_R	1.927	1.00
337_Y	343_A	1.916	1.00
134_A	162_R	1.906	1.00
361_T	409_Q	1.899	1.00
127_G	148_S	1.842	1.00
96_S	104_Q	1.835	1.00
265_E	269_L	1.828	1.00
334_C	410_V	1.821	1.00
510_N	514_I	1.818	1.00
245_E	274_A	1.810	1.00
350_L	355_G	1.809	1.00
331_G	497_S	1.808	1.00
331_G	356_V	1.805	1.00
436_Q	470_T	1.800	1.00
510_N	517_G	1.799	1.00
99_S	104_Q	1.773	1.00
263_P	269_L	1.751	1.00
75_A	78_A	1.744	1.00
262_P	269_L	1.708	1.00
263_P	268_R	1.701	1.00
66_V	70_S	1.700	1.00
414_L	485_A	1.693	1.00
206_I	223_A	1.685	1.00
316_S	321_R	1.666	0.99
238_I	243_A	1.658	0.99
422_G	425_A	1.636	0.99
109_D	139_D	1.628	0.99
98_S	101_A	1.621	0.99
358_A	410_V	1.585	0.99
307_E	311_L	1.583	0.99
105_V	112_C	1.555	0.99
361_T	407_K	1.553	0.99
514_I	518_L	1.542	0.99
108_W	137_A	1.534	0.99
412_V	489_A	1.531	0.99
265_E	270_K	1.512	0.99
296_D	340_G	1.511	0.99
132_E	136_Q	1.496	0.99
74_D	79_Q	1.487	0.99
369_D	378_L	1.478	0.99
263_P	270_K	1.478	0.99
65_C	69_R	1.471	0.99
75_A	79_Q	1.471	0.99
333_I	350_L	1.449	0.99
375_I	385_V	1.432	0.98
84_Q	87_E	1.425	0.98
262_P	273_N	1.424	0.98
421_F	426_D	1.410	0.98
262_P	266_A	1.407	0.98
163_A	170_V	1.405	0.98
78_A	83_Q	1.404	0.98
402_A	406_A	1.398	0.98
198_V	220_I	1.393	0.98
333_I	489_A	1.386	0.98
192_P	214_A	1.385	0.98
346_A	414_L	1.383	0.98
517_G	520_S	1.370	0.98
77_I	81_I	1.367	0.98
196_I	255_V	1.365	0.98
197_G	253_S	1.365	0.98
264_A	268_R	1.359	0.98
76_G	81_I	1.357	0.98
422_G	426_D	1.345	0.98
270_K	273_N	1.344	0.98
138_L	162_R	1.343	0.98
224_I	247_L	1.341	0.98
67_A	70_S	1.339	0.97
342_L	455_T	1.339	0.97
171_M	238_I	1.337	0.97
418_V	422_G	1.335	0.97
258_F	284_A	1.330	0.97
111_A	114_K	1.326	0.97
266_A	269_L	1.322	0.97
248_S	282_T	1.316	0.97
158_Q	161_T	1.304	0.97
114_K	140_R	1.303	0.97
510_N	520_S	1.303	0.97
85_L	88_A	1.301	0.97
432_V	436_Q	1.299	0.97
134_A	168_L	1.297	0.97
514_I	517_G	1.295	0.97
513_V	517_G	1.293	0.97
65_C	70_S	1.288	0.97
266_A	273_N	1.286	0.97
108_W	140_R	1.272	0.97
131_A	158_Q	1.271	0.97
256_L	276_K	1.270	0.97
516_I	520_S	1.268	0.97
107_R	136_Q	1.267	0.96
509_E	512_A	1.264	0.96
194_G	219_G	1.261	0.96
198_V	209_L	1.260	0.96
336_L	404_L	1.246	0.96
417_V	422_G	1.228	0.96
112_C	140_R	1.227	0.96
398_N	437_K	1.221	0.96
151_V	228_G	1.211	0.95
199_I	247_L	1.210	0.95
417_V	421_F	1.207	0.95
161_T	165_E	1.205	0.95
282_T	321_R	1.199	0.95
77_I	80_A	1.193	0.95
265_E	273_N	1.192	0.95
131_A	155_D	1.190	0.95
210_C	223_A	1.183	0.95
268_R	271_I	1.175	0.95
263_P	266_A	1.173	0.95
76_G	80_A	1.166	0.94
197_G	247_L	1.162	0.94
405_G	413_L	1.162	0.94
64_I	70_S	1.160	0.94
200_G	204_T	1.156	0.94
422_G	427_P	1.154	0.94
262_P	270_K	1.145	0.94
175_C	340_G	1.143	0.94
205_G	327_P	1.135	0.94
222_H	247_L	1.134	0.94
362_H	366_M	1.127	0.93
109_D	140_R	1.126	0.93
66_V	71_E	1.121	0.93
517_G	521_F	1.109	0.93
297_E	344_A	1.108	0.93
380_D	383_Y	1.107	0.93
298_N	303_S	1.106	0.93
423_A	426_D	1.101	0.93
175_C	225_G	1.099	0.92
510_N	513_V	1.098	0.92
426_D	429_A	1.095	0.92
263_P	273_N	1.088	0.92
298_N	304_S	1.088	0.92
266_A	271_I	1.088	0.92
434_A	438_A	1.086	0.92
371_D	403_D	1.086	0.92
156_E	228_G	1.081	0.92
452_A	478_V	1.080	0.92
420_G	423_A	1.080	0.92
290_T	352_G	1.079	0.92
387_R	396_L	1.078	0.92
88_A	113_Q	1.073	0.92
153_L	156_E	1.063	0.91
149_D	385_V	1.062	0.91
180_I	222_H	1.053	0.91
399_Q	402_A	1.053	0.91
248_S	276_K	1.050	0.91
75_A	80_A	1.045	0.90
412_V	449_Y	1.045	0.90
123_I	130_A	1.044	0.90
369_D	376_I	1.041	0.90
127_G	151_V	1.033	0.90
353_H	490_A	1.027	0.90
74_D	77_I	1.025	0.90
91_Q	102_L	1.023	0.89
325_I	352_G	1.017	0.89
248_S	275_M	1.015	0.89
423_A	427_P	1.012	0.89
272_V	282_T	1.006	0.89
90_K	105_V	1.000	0.88
240_A	260_S	0.994	0.88
129_Y	133_L	0.994	0.88
138_L	168_L	0.990	0.88
517_G	522_A	0.984	0.88
296_D	301_F	0.984	0.88
108_W	112_C	0.983	0.88
293_V	297_E	0.981	0.87
64_I	69_R	0.980	0.87
418_V	421_F	0.979	0.87
326_A	483_P	0.976	0.87
160_K	236_G	0.976	0.87
512_A	517_G	0.974	0.87
187_F	203_G	0.973	0.87
158_Q	162_R	0.971	0.87
156_E	236_G	0.968	0.87
153_L	228_G	0.968	0.87
108_W	111_A	0.968	0.87
112_C	118_A	0.963	0.86
284_A	321_R	0.954	0.86
395_T	399_Q	0.953	0.86
149_D	204_T	0.951	0.86
262_P	271_I	0.949	0.86
199_I	243_A	0.948	0.86
131_A	138_L	0.946	0.85
405_G	448_L	0.944	0.85
98_S	102_L	0.944	0.85
155_D	159_L	0.942	0.85
265_E	271_I	0.941	0.85
419_I	422_G	0.941	0.85
74_D	82_M	0.941	0.85
517_G	526_Q	0.940	0.85
296_D	299_V	0.939	0.85
290_T	293_V	0.932	0.85
294_A	297_E	0.931	0.84
97_G	104_Q	0.929	0.84
331_G	493_I	0.928	0.84
336_L	401_I	0.925	0.84
97_G	106_R	0.925	0.84
366_M	370_A	0.925	0.84
235_V	240_A	0.925	0.84
421_F	427_P	0.924	0.84
361_T	364_H	0.922	0.84
244_L	260_S	0.919	0.84
347_A	350_L	0.918	0.84
366_M	369_D	0.917	0.84
132_E	135_N	0.910	0.83
200_G	259_V	0.909	0.83
220_I	223_A	0.907	0.83
98_S	103_T	0.904	0.83
144_V	163_A	0.901	0.83
421_F	424_T	0.895	0.82
174_D	302_A	0.893	0.82
289_Y	352_G	0.892	0.82
267_V	271_I	0.887	0.82
283_V	324_A	0.884	0.81
340_G	344_A	0.884	0.81
367_M	370_A	0.884	0.81
518_L	521_F	0.880	0.81
67_A	71_E	0.878	0.81
85_L	89_L	0.876	0.81
199_I	258_F	0.875	0.81
146_M	170_V	0.874	0.81
108_W	121_A	0.873	0.80
268_R	272_V	0.871	0.80
495_P	499_A	0.871	0.80
293_V	300_W	0.869	0.80
360_D	364_H	0.868	0.80
111_A	137_A	0.868	0.80
94_Q	104_Q	0.866	0.80
245_E	275_M	0.865	0.80
433_S	470_T	0.864	0.80
118_A	142_L	0.864	0.80
135_N	166_K	0.863	0.80
433_S	436_Q	0.861	0.80
240_A	258_F	0.861	0.80
360_D	410_V	0.860	0.79
510_N	523_L	0.852	0.79
430_S	433_S	0.851	0.79
111_A	140_R	0.848	0.79
66_V	91_Q	0.844	0.78
64_I	71_E	0.843	0.78
371_D	399_Q	0.842	0.78
293_V	299_V	0.842	0.78
245_E	271_I	0.842	0.78
367_M	403_D	0.841	0.78
494_H	497_S	0.839	0.78
420_G	425_A	0.838	0.78
134_A	170_V	0.837	0.78
513_V	526_Q	0.836	0.78
157_I	235_V	0.833	0.77
398_N	402_A	0.831	0.77
522_A	526_Q	0.830	0.77
364_H	408_P	0.830	0.77
226_L	243_A	0.826	0.77
174_D	296_D	0.825	0.77
334_C	358_A	0.825	0.77
466_Q	469_A	0.823	0.76
174_D	340_G	0.823	0.76
124_S	147_F	0.823	0.76
284_A	316_S	0.823	0.76
96_S	106_R	0.822	0.76
122_L	185_L	0.820	0.76
130_A	146_M	0.820	0.76
510_N	518_L	0.819	0.76
241_L	271_I	0.819	0.76
126_A	148_S	0.818	0.76
244_L	256_L	0.814	0.76
421_F	425_A	0.803	0.75
145_M	178_S	0.803	0.75
407_K	448_L	0.802	0.75
174_D	187_F	0.800	0.74
451_I	489_A	0.796	0.74
377_D	382_F	0.793	0.74
508_L	511_V	0.791	0.74
359_D	362_H	0.791	0.74
402_A	445_N	0.783	0.73
269_L	274_A	0.780	0.72
393_D	396_L	0.779	0.72
138_L	141_N	0.778	0.72
510_N	526_Q	0.778	0.72
293_V	296_D	0.774	0.72
299_V	303_S	0.772	0.72
114_K	142_L	0.771	0.72
248_S	279_G	0.770	0.72
424_T	427_P	0.769	0.71
131_A	135_N	0.769	0.71
111_A	142_L	0.767	0.71
400_L	404_L	0.766	0.71
435_W	450_A	0.766	0.71
418_V	423_A	0.766	0.71
299_V	305_L	0.766	0.71
160_K	164_R	0.765	0.71
426_D	430_S	0.763	0.71
293_V	340_G	0.762	0.71
436_Q	474_A	0.761	0.71
286_F	323_N	0.761	0.71
151_V	156_E	0.761	0.71
134_A	159_L	0.760	0.71
309_A	312_A	0.759	0.70
300_W	305_L	0.759	0.70
130_A	148_S	0.758	0.70
333_I	355_G	0.757	0.70
197_G	226_L	0.755	0.70
174_D	300_W	0.751	0.70
371_D	400_L	0.747	0.69
332_F	356_V	0.746	0.69
510_N	525_L	0.745	0.69
266_A	270_K	0.745	0.69
365_G	379_G	0.744	0.69
65_C	68_I	0.741	0.69
270_K	274_A	0.741	0.69
86_E	89_L	0.739	0.68
510_N	521_F	0.739	0.68
64_I	67_A	0.738	0.68
76_G	82_M	0.734	0.68
508_L	517_G	0.733	0.68
510_N	516_I	0.731	0.68
452_A	471_L	0.728	0.67
376_I	385_V	0.728	0.67
108_W	168_L	0.726	0.67
299_V	302_A	0.725	0.67
175_C	316_S	0.723	0.67
159_L	170_V	0.721	0.66
126_A	129_Y	0.719	0.66
75_A	81_I	0.718	0.66
339_G	344_A	0.718	0.66
508_L	516_I	0.717	0.66
298_N	305_L	0.716	0.66
299_V	340_G	0.716	0.66
93_A	96_S	0.715	0.66
87_E	91_Q	0.714	0.66
184_P	338_T	0.711	0.65
200_G	206_I	0.710	0.65
420_G	424_T	0.709	0.65
90_K	111_A	0.708	0.65
126_A	203_G	0.708	0.65
151_V	155_D	0.708	0.65
141_N	166_K	0.707	0.65
144_V	168_L	0.707	0.65
511_V	515_N	0.707	0.65
368_L	400_L	0.706	0.65
510_N	519_R	0.706	0.65
91_Q	104_Q	0.705	0.65
68_I	71_E	0.704	0.65
328_V	484_E	0.703	0.65
289_Y	307_E	0.703	0.65
134_A	163_A	0.702	0.64
309_A	315_L	0.702	0.64
198_V	257_A	0.701	0.64
150_N	153_L	0.700	0.64
361_T	408_P	0.700	0.64
289_Y	325_I	0.698	0.64
198_V	223_A	0.697	0.64
267_V	270_K	0.695	0.64
67_A	85_L	0.694	0.64
360_D	377_D	0.693	0.63
89_L	102_L	0.692	0.63
133_L	136_Q	0.691	0.63
263_P	271_I	0.691	0.63
138_L	144_V	0.690	0.63
364_H	368_L	0.689	0.63
407_K	410_V	0.689	0.63
70_S	78_A	0.688	0.63
490_A	494_H	0.688	0.63
376_I	384_T	0.686	0.63
486_T	490_A	0.684	0.62
358_A	400_L	0.684	0.62
296_D	300_W	0.679	0.62
213_I	220_I	0.678	0.62
355_G	490_A	0.678	0.62
296_D	305_L	0.677	0.62
365_G	378_L	0.676	0.61
131_A	162_R	0.674	0.61
360_D	382_F	0.673	0.61
125_V	130_A	0.673	0.61
162_R	166_K	0.672	0.61
113_Q	140_R	0.671	0.61
70_S	91_Q	0.669	0.61
288_G	305_L	0.667	0.60
131_A	159_L	0.667	0.60
270_K	315_L	0.666	0.60
171_M	243_A	0.666	0.60
357_E	380_D	0.664	0.60
517_G	527_S	0.662	0.60
509_E	521_F	0.662	0.60
206_I	225_G	0.662	0.60
507_L	511_V	0.660	0.60
290_T	351_A	0.660	0.60
398_N	438_A	0.659	0.60
523_L	528_A	0.658	0.59
65_C	71_E	0.658	0.59
513_V	519_R	0.658	0.59
272_V	276_K	0.658	0.59
198_V	210_C	0.657	0.59
93_A	126_A	0.657	0.59
480_S	484_E	0.657	0.59
353_H	494_H	0.657	0.59
514_I	519_R	0.655	0.59
264_A	269_L	0.655	0.59
508_L	512_A	0.655	0.59
196_I	213_I	0.655	0.59
71_E	78_A	0.654	0.59
94_Q	106_R	0.652	0.59
512_A	516_I	0.649	0.58
148_S	175_C	0.649	0.58
113_Q	118_A	0.644	0.58
354_L	490_A	0.642	0.58
75_A	82_M	0.640	0.57
510_N	527_S	0.640	0.57
516_I	523_L	0.640	0.57
431_L	481_S	0.637	0.57
69_R	87_E	0.637	0.57
408_P	448_L	0.637	0.57
514_I	528_A	0.636	0.57
66_V	76_G	0.636	0.57
160_K	167_G	0.636	0.57
90_K	113_Q	0.635	0.57
509_E	516_I	0.632	0.56
174_D	301_F	0.630	0.56
180_I	246_M	0.628	0.56
509_E	520_S	0.628	0.56
468_I	480_S	0.627	0.56
513_V	520_S	0.627	0.56
244_L	271_I	0.625	0.56
349_L	353_H	0.623	0.55
93_A	104_Q	0.623	0.55
268_R	274_A	0.619	0.55
174_D	383_Y	0.619	0.55
77_I	82_M	0.619	0.55
469_A	472_E	0.617	0.55
339_G	346_A	0.617	0.55
432_V	439_C	0.616	0.54
498_P	502_Q	0.615	0.54
204_T	386_G	0.614	0.54
112_C	137_A	0.613	0.54
329_S	475_G	0.612	0.54
100_Q	104_Q	0.611	0.54
74_D	83_Q	0.610	0.54
368_L	404_L	0.607	0.53
206_I	386_G	0.606	0.53
138_L	165_E	0.606	0.53
509_E	519_R	0.606	0.53
517_G	525_L	0.603	0.53
457_T	480_S	0.603	0.53
247_L	498_P	0.603	0.53
203_G	383_Y	0.602	0.53
346_A	485_A	0.602	0.53
449_Y	492_L	0.602	0.53
196_I	429_A	0.600	0.53
363_Q	366_M	0.600	0.53
69_R	78_A	0.600	0.53
358_A	364_H	0.598	0.52
333_I	412_V	0.596	0.52
85_L	91_Q	0.596	0.52
468_I	472_E	0.593	0.52
151_V	261_K	0.592	0.52
472_E	478_V	0.591	0.51
295_R	379_G	0.591	0.51
339_G	385_V	0.590	0.51
135_N	138_L	0.587	0.51
149_D	174_D	0.586	0.51
164_R	237_G	0.586	0.51
171_M	450_A	0.585	0.51
82_M	88_A	0.584	0.51
199_I	226_L	0.584	0.51
84_Q	89_L	0.583	0.50
76_G	83_Q	0.582	0.50
244_L	258_F	0.582	0.50
260_S	284_A	0.582	0.50
511_V	514_I	0.581	0.50
149_D	225_G	0.581	0.50
103_T	469_A	0.577	0.50
91_Q	105_V	0.577	0.50
271_I	274_A	0.577	0.50
518_L	523_L	0.576	0.50
92_L	108_W	0.576	0.50
507_L	510_N	0.575	0.50
68_I	121_A	0.574	0.49
401_I	438_A	0.573	0.49
247_L	280_K	0.573	0.49
297_E	301_F	0.571	0.49
338_T	456_G	0.570	0.49
141_N	182_G	0.570	0.49
359_D	379_G	0.569	0.49
364_H	409_Q	0.568	0.49
417_V	423_A	0.568	0.49
123_I	134_A	0.567	0.49
502_Q	506_S	0.564	0.48
179_M	186_A	0.563	0.48
67_A	91_Q	0.563	0.48
156_E	205_G	0.562	0.48
514_I	526_Q	0.561	0.48
66_V	78_A	0.560	0.48
516_I	519_R	0.560	0.48
206_I	342_L	0.559	0.48
513_V	516_I	0.558	0.47
512_A	515_N	0.557	0.47
235_V	339_G	0.557	0.47
211_S	338_T	0.556	0.47
405_G	450_A	0.555	0.47
285_L	345_E	0.554	0.47
96_S	100_Q	0.554	0.47
235_V	263_P	0.554	0.47
69_R	85_L	0.553	0.47
209_L	333_I	0.553	0.47
120_L	183_T	0.552	0.47
370_A	399_Q	0.552	0.47
341_T	348_G	0.551	0.47
250_D	280_K	0.551	0.47
336_L	400_L	0.551	0.47
79_Q	83_Q	0.550	0.47
339_G	350_L	0.550	0.47
509_E	513_V	0.550	0.47
206_I	337_Y	0.549	0.46
346_A	368_L	0.548	0.46
517_G	528_A	0.548	0.46
417_V	420_G	0.548	0.46
420_G	426_D	0.547	0.46
148_S	189_N	0.547	0.46
321_R	498_P	0.545	0.46
150_N	261_K	0.545	0.46
133_L	164_R	0.542	0.46
253_S	256_L	0.542	0.46
221_T	280_K	0.541	0.45
451_I	458_E	0.541	0.45
373_H	383_Y	0.539	0.45
334_C	404_L	0.539	0.45
498_P	501_Q	0.539	0.45
132_E	406_A	0.539	0.45
90_K	103_T	0.538	0.45
520_S	526_Q	0.538	0.45
386_G	456_G	0.537	0.45
427_P	430_S	0.537	0.45
174_D	293_V	0.537	0.45
418_V	435_W	0.536	0.45
248_S	271_I	0.536	0.45
436_Q	473_D	0.534	0.45
253_S	280_K	0.533	0.44
288_G	348_G	0.533	0.44
300_W	340_G	0.532	0.44
452_A	476_I	0.532	0.44
150_N	299_V	0.531	0.44
335_G	346_A	0.531	0.44
149_D	175_C	0.531	0.44
333_I	414_L	0.530	0.44
225_G	259_V	0.529	0.44
221_T	246_M	0.529	0.44
70_S	87_E	0.528	0.44
176_G	207_Q	0.528	0.44
136_Q	139_D	0.527	0.44
224_I	243_A	0.526	0.44
64_I	90_K	0.526	0.44
490_A	493_I	0.526	0.44
184_P	456_G	0.525	0.44
174_D	380_D	0.525	0.44
67_A	77_I	0.524	0.43
185_L	482_L	0.524	0.43
66_V	85_L	0.524	0.43
514_I	521_F	0.524	0.43
247_L	253_S	0.524	0.43
509_E	515_N	0.523	0.43
301_F	305_L	0.523	0.43
130_A	134_A	0.523	0.43
333_I	485_A	0.522	0.43
134_A	252_K	0.522	0.43
153_L	300_W	0.521	0.43
296_D	344_A	0.521	0.43
90_K	137_A	0.520	0.43
384_T	400_L	0.519	0.43
194_G	253_S	0.519	0.43
418_V	427_P	0.519	0.43
187_F	286_F	0.519	0.43
81_I	452_A	0.518	0.43
161_T	167_G	0.518	0.43
334_C	407_K	0.518	0.43
496_L	500_A	0.517	0.43
69_R	76_G	0.517	0.43
515_N	518_L	0.517	0.43
508_L	518_L	0.517	0.43
114_K	136_Q	0.516	0.42
515_N	528_A	0.516	0.42
150_N	174_D	0.515	0.42
121_A	199_I	0.514	0.42
123_I	377_D	0.513	0.42
214_A	459_R	0.513	0.42
165_E	473_D	0.513	0.42
206_I	237_G	0.513	0.42
66_V	77_I	0.513	0.42
243_A	247_L	0.512	0.42
337_Y	340_G	0.512	0.42
509_E	517_G	0.510	0.42
71_E	84_Q	0.510	0.42
187_F	373_H	0.510	0.42
92_L	291_P	0.510	0.42
342_L	483_P	0.509	0.42
99_S	132_E	0.508	0.42
156_E	160_K	0.507	0.41
339_G	420_G	0.507	0.41
108_W	142_L	0.506	0.41
139_D	166_K	0.506	0.41
142_L	168_L	0.505	0.41
322_R	495_P	0.504	0.41
520_S	528_A	0.504	0.41
120_L	185_L	0.504	0.41
512_A	519_R	0.503	0.41
471_L	475_G	0.502	0.41
301_F	364_H	0.501	0.41
428_A	467_Q	0.500	0.41
213_I	486_T	0.500	0.41

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2csuA	2	0.7351	100	0.431	Contact Map
3dmyA	2	0.7784	100	0.44	Contact Map
3pffA	2	0.5441	100	0.631	Contact Map
3mwdB	1	0.4991	100	0.649	Contact Map
2fp4A	1	0.5135	100	0.681	Contact Map
2yv1A	1	0.4595	100	0.687	Contact Map
2nu8A	1	0.4865	100	0.694	Contact Map
1oi7A	1	0.4559	100	0.698	Contact Map
2yv2A	1	0.4613	100	0.699	Contact Map
3ff4A	1	0.2126	99.9	0.86	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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