GREMLIN Database
GLCA - Glycolate permease GlcA
UniProt: Q46839 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG12995
Length: 560 (502)
Sequences: 1564 (973)
Seq/√Len: 43.4

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
524_R527_E6.3931.00
52_L56_F5.1881.00
27_F49_L4.6041.00
450_F454_S4.3171.00
496_A547_T4.3121.00
264_L268_V4.0891.00
237_T257_V3.8421.00
411_I414_K3.8361.00
55_I65_A3.8321.00
51_I65_A3.6621.00
229_V265_F3.5151.00
389_I393_F3.3251.00
456_F540_A3.2521.00
549_L553_V3.1761.00
407_A411_I3.1041.00
111_T116_L3.0811.00
97_S397_V3.0201.00
30_V35_L3.0071.00
162_I213_M2.9851.00
124_S258_S2.9831.00
51_I429_V2.9561.00
96_A408_E2.9141.00
540_A544_G2.8941.00
47_L69_A2.8251.00
180_A476_G2.8041.00
27_F31_A2.7681.00
53_I57_A2.6951.00
92_K412_S2.6061.00
320_L386_I2.6031.00
197_R243_N2.5871.00
488_V493_L2.5531.00
73_F421_G2.4781.00
391_S395_L2.4681.00
215_D219_G2.3211.00
96_A401_K2.2871.00
20_V57_A2.2761.00
302_Y306_Q2.2611.00
400_K404_G2.2201.00
37_L41_V2.1781.00
403_I407_A2.1771.00
253_T257_V2.1761.00
387_A391_S2.1661.00
233_S261_S2.1521.00
392_I402_G2.1381.00
308_I312_S2.1200.99
305_G309_R2.1170.99
48_I52_L2.1160.99
236_V240_F2.1120.99
222_E273_N2.1070.99
197_R239_F2.1000.99
147_V519_T2.0970.99
177_I195_A2.0810.99
545_I549_L2.0750.99
70_G356_L2.0650.99
312_S394_I2.0450.99
157_A515_A2.0060.99
398_G401_K2.0000.99
541_S545_I1.9890.99
480_S494_V1.9870.99
204_V235_A1.9820.99
194_M491_T1.9680.99
456_F544_G1.9440.99
309_R396_G1.9390.99
225_P269_W1.8730.99
324_W383_A1.8350.98
101_D104_R1.8260.98
399_I403_I1.8210.98
469_T504_G1.8110.98
332_L335_P1.7980.98
180_A494_V1.7940.98
329_F332_L1.7930.98
308_I315_L1.7900.98
30_V34_V1.7670.98
81_A417_I1.7550.98
205_L208_F1.7510.98
476_G494_V1.7470.98
18_A442_V1.7350.98
233_S258_S1.7200.98
208_F227_A1.6990.98
430_T436_S1.6920.97
116_L226_A1.6910.97
168_V468_D1.6830.97
169_A195_A1.6730.97
240_F244_Y1.6710.97
330_K334_A1.6500.97
122_G210_L1.6350.97
239_F244_Y1.6330.97
96_A404_G1.6250.97
90_L388_A1.6180.97
241_T253_T1.6140.97
345_N373_K1.6130.97
45_I48_I1.6110.97
178_L247_P1.6060.96
233_S257_V1.6010.96
204_V231_G1.6010.96
260_V264_L1.5830.96
44_A422_M1.5660.96
195_A499_S1.5640.96
303_S306_Q1.5610.96
31_A37_L1.5600.96
31_A45_I1.5580.96
306_Q309_R1.5510.96
459_W536_S1.5440.96
129_L137_A1.5410.96
196_G242_S1.5400.96
211_V223_T1.5360.95
118_V159_L1.5290.95
505_K511_S1.5210.95
344_I377_L1.5180.95
181_G186_I1.5140.95
468_D501_G1.4880.95
106_S311_W1.4660.94
180_A191_I1.4350.93
198_Q546_I1.4330.93
42_A128_L1.4300.93
147_V521_M1.4220.93
71_Y432_Y1.4170.93
38_K42_A1.4130.93
226_A265_F1.3920.92
89_F388_A1.3890.92
355_V370_A1.3810.92
224_W227_A1.3800.92
265_F269_W1.3800.92
548_L552_Y1.3690.92
187_D190_H1.3680.92
198_Q550_Q1.3610.91
68_A71_Y1.3590.91
137_A526_S1.3570.91
186_I491_T1.3470.91
122_G126_G1.3440.91
386_I390_I1.3290.90
230_A262_L1.3280.90
20_V23_I1.3260.90
92_K409_T1.3240.90
114_Q277_A1.3230.90
225_P271_P1.3200.90
181_G188_P1.3160.90
452_F541_S1.3080.90
165_T506_M1.2980.89
119_L230_A1.2880.89
237_T254_S1.2880.89
172_A175_V1.2770.89
55_I62_I1.2750.89
193_A243_N1.2650.88
56_F62_I1.2640.88
122_G163_A1.2630.88
154_L315_L1.2570.88
126_G163_A1.2500.88
201_F546_I1.2440.87
179_V182_Q1.2420.87
198_Q499_S1.2400.87
229_V261_S1.2350.87
105_S302_Y1.2340.87
158_G531_Y1.2330.87
512_I529_F1.2310.87
127_A167_P1.2300.87
67_A348_I1.2280.87
95_V101_D1.2250.86
397_V401_K1.2240.86
239_F243_N1.2220.86
56_F59_K1.2110.86
97_S173_L1.2090.86
122_G195_A1.2060.86
463_F532_T1.2030.85
234_F251_D1.2020.85
237_T253_T1.1900.85
534_K538_I1.1900.85
503_T539_F1.1750.84
154_L531_Y1.1740.84
392_I396_G1.1730.84
205_L538_I1.1690.84
332_L344_I1.1690.84
476_G480_S1.1680.84
90_L317_L1.1670.84
446_T449_M1.1580.83
199_L238_Q1.1540.83
212_A220_V1.1530.83
277_A280_M1.1500.83
202_L542_V1.1470.83
158_G528_L1.1470.83
320_L387_A1.1450.82
175_V178_L1.1440.82
449_M452_F1.1430.82
316_I394_I1.1420.82
507_I533_V1.1340.82
312_S315_L1.1330.82
114_Q276_T1.1310.82
74_I372_F1.1230.81
69_A429_V1.1210.81
452_F548_L1.1150.81
208_F228_L1.1140.81
208_F224_W1.1100.80
209_W535_H1.1080.80
114_Q151_F1.1060.80
347_Q371_V1.1020.80
116_L223_T1.0980.80
44_A418_L1.0960.80
541_S544_G1.0920.79
102_I302_Y1.0900.79
184_T494_V1.0870.79
83_I172_A1.0850.79
46_T426_F1.0830.79
92_K408_E1.0790.79
119_L227_A1.0730.78
376_P379_A1.0720.78
118_V214_M1.0700.78
265_F268_V1.0640.78
98_G156_A1.0610.77
117_Q149_L1.0600.77
328_P332_L1.0600.77
66_F69_A1.0580.77
405_V408_E1.0520.77
75_Y428_F1.0480.76
86_A406_F1.0460.76
196_G243_N1.0450.76
375_D378_S1.0390.76
55_I260_V1.0380.76
67_A70_G1.0360.76
47_L133_A1.0350.76
169_A468_D1.0340.75
516_C528_L1.0300.75
119_L262_L1.0300.75
329_F333_F1.0300.75
89_F402_G1.0290.75
400_K541_S1.0290.75
232_G389_I1.0230.75
112_D274_T1.0170.74
534_K537_L1.0140.74
19_L23_I1.0120.74
73_F77_L1.0120.74
16_L57_A1.0060.73
121_I142_T1.0050.73
446_T453_F1.0020.73
93_L405_V0.9990.73
437_T481_T0.9960.73
73_F425_A0.9950.73
388_A402_G0.9910.72
51_I55_I0.9870.72
83_I175_V0.9830.72
190_H491_T0.9800.71
37_L45_I0.9770.71
185_G425_A0.9750.71
312_S316_I0.9700.71
81_A420_I0.9690.71
179_V439_L0.9690.71
116_L485_Q0.9680.70
472_N498_T0.9670.70
260_V272_K0.9630.70
227_A232_G0.9620.70
406_F410_L0.9610.70
23_I49_L0.9590.70
68_A456_F0.9590.70
177_I191_I0.9590.70
144_A442_V0.9580.70
71_Y428_F0.9580.70
451_P544_G0.9560.70
424_L478_L0.9560.70
323_I329_F0.9510.69
27_F46_T0.9490.69
458_G475_F0.9470.69
225_P268_V0.9470.69
483_A506_M0.9460.69
244_Y489_S0.9430.68
97_S395_L0.9430.68
68_A432_Y0.9390.68
76_G419_S0.9370.68
53_I58_F0.9350.68
204_V232_G0.9340.68
36_R527_E0.9320.68
303_S541_S0.9310.67
80_I170_F0.9290.67
477_S480_S0.9280.67
82_W382_T0.9280.67
325_T378_S0.9260.67
216_G438_T0.9250.67
169_A502_V0.9220.67
430_T435_M0.9170.66
129_L141_I0.9160.66
232_G236_V0.9150.66
200_P239_F0.9140.66
52_L59_K0.9120.66
136_G171_G0.9110.66
66_F545_I0.9100.66
58_F438_T0.9090.66
225_P265_F0.9050.65
457_L478_L0.9030.65
20_V53_I0.9000.65
26_I30_V0.8990.65
124_S259_I0.8970.65
117_Q151_F0.8940.64
167_P468_D0.8940.64
398_G484_Q0.8940.64
309_R312_S0.8940.64
163_A210_L0.8940.64
191_I494_V0.8910.64
527_E530_R0.8900.64
408_E411_I0.8900.64
32_L36_R0.8900.64
179_V473_A0.8880.64
85_V410_L0.8850.64
412_S416_P0.8840.63
248_E325_T0.8800.63
456_F537_L0.8770.63
441_L485_Q0.8760.63
92_K405_V0.8740.63
459_W540_A0.8710.62
541_S549_L0.8710.62
45_I477_S0.8700.62
102_I306_Q0.8680.62
166_A251_D0.8670.62
165_T468_D0.8650.62
165_T502_V0.8630.62
350_H369_D0.8620.61
316_I390_I0.8620.61
227_A231_G0.8610.61
128_L384_I0.8590.61
215_D220_V0.8570.61
505_K510_Q0.8550.61
31_A314_F0.8550.61
238_Q468_D0.8490.60
146_L213_M0.8480.60
514_V526_S0.8450.60
440_A481_T0.8440.60
192_G419_S0.8440.60
135_F172_A0.8360.59
193_A239_F0.8340.59
514_V535_H0.8340.59
240_F542_V0.8320.59
241_T257_V0.8320.59
62_I268_V0.8310.59
419_S501_G0.8280.58
156_A311_W0.8260.58
149_L495_A0.8250.58
191_I480_S0.8250.58
197_R550_Q0.8220.58
80_I135_F0.8190.57
128_L318_T0.8190.57
500_G504_G0.8180.57
247_P250_P0.8170.57
299_P524_R0.8160.57
233_S237_T0.8160.57
146_L228_L0.8120.57
167_P195_A0.8100.57
348_I495_A0.8090.57
384_I509_P0.8080.56
215_D221_K0.8080.56
128_L132_A0.8040.56
187_D327_K0.8040.56
486_I493_L0.8030.56
188_P192_G0.8020.56
168_V506_M0.8010.56
335_P390_I0.8010.56
25_I131_G0.7990.56
401_K404_G0.7980.56
123_F254_S0.7970.55
122_G231_G0.7960.55
135_F469_T0.7960.55
127_A163_A0.7960.55
317_L382_T0.7950.55
54_A429_V0.7950.55
200_P235_A0.7910.55
198_Q201_F0.7870.54
468_D499_S0.7870.54
17_S57_A0.7860.54
121_I125_F0.7850.54
26_I346_F0.7840.54
151_F451_P0.7840.54
443_L446_T0.7830.54
300_S304_L0.7830.54
135_F467_S0.7810.54
247_P262_L0.7800.54
275_E278_I0.7790.54
189_F192_G0.7790.54
316_I387_A0.7780.54
399_I404_G0.7760.53
130_E171_G0.7750.53
542_V546_I0.7710.53
230_A233_S0.7710.53
121_I149_L0.7680.53
280_M456_F0.7650.52
411_I541_S0.7640.52
163_A167_P0.7620.52
173_L325_T0.7620.52
28_F46_T0.7620.52
132_A172_A0.7620.52
38_K41_V0.7610.52
36_R42_A0.7590.52
114_Q275_E0.7560.52
179_V183_V0.7560.52
314_F348_I0.7560.52
260_V315_L0.7550.51
107_V504_G0.7510.51
301_E390_I0.7480.51
204_V491_T0.7480.51
442_V445_G0.7470.51
177_I472_N0.7460.51
317_L426_F0.7450.50
49_L442_V0.7430.50
233_S507_I0.7410.50
179_V464_L0.7410.50
59_K389_I0.7410.50
393_F399_I0.7390.50
68_A356_L0.7380.50
461_G471_S0.7370.50
69_A425_A0.7360.50
431_N470_S0.7340.49
447_G453_F0.7320.49
158_G532_T0.7310.49
350_H440_A0.7310.49
76_G201_F0.7300.49
527_E531_Y0.7300.49
49_L52_L0.7300.49
239_F251_D0.7280.49
95_V104_R0.7280.49
505_K514_V0.7260.49
415_W418_L0.7240.48
232_G237_T0.7240.48
88_V105_S0.7230.48
297_P300_S0.7210.48
48_I347_Q0.7210.48
165_T168_V0.7200.48
32_L39_G0.7190.48
102_I307_I0.7180.48
257_V261_S0.7180.48
46_T88_V0.7170.48
66_F484_Q0.7160.48
174_G246_G0.7160.48
48_I51_I0.7130.47
334_A375_D0.7100.47
483_A488_V0.7090.47
45_I49_L0.7090.47
267_K394_I0.7050.47
169_A238_Q0.7040.47
439_L464_L0.7020.46
128_L247_P0.7000.46
266_L269_W0.6990.46
301_E545_I0.6990.46
315_L541_S0.6990.46
126_G210_L0.6980.46
23_I53_I0.6950.46
345_N389_I0.6940.46
451_P486_I0.6930.46
418_L422_M0.6920.45
104_R145_L0.6920.45
331_A373_K0.6910.45
276_T280_M0.6900.45
319_V403_I0.6880.45
273_N276_T0.6870.45
130_E136_G0.6870.45
65_A74_I0.6860.45
321_V384_I0.6850.45
124_S230_A0.6850.45
52_L63_D0.6830.45
199_L203_S0.6830.45
118_V453_F0.6830.45
29_F196_G0.6820.44
133_A137_A0.6810.44
225_P229_V0.6810.44
506_M521_M0.6800.44
264_L299_P0.6800.44
201_F499_S0.6790.44
33_A118_V0.6790.44
157_A478_L0.6780.44
327_K330_K0.6750.44
110_I154_L0.6740.44
132_A175_V0.6730.44
99_Q307_I0.6730.44
238_Q502_V0.6720.44
86_A180_A0.6720.44
61_P224_W0.6720.44
128_L512_I0.6710.43
399_I452_F0.6700.43
328_P331_A0.6690.43
201_F240_F0.6690.43
208_F486_I0.6690.43
180_A473_A0.6680.43
502_V510_Q0.6650.43
47_L51_I0.6640.43
403_I411_I0.6640.43
122_G139_V0.6630.43
29_F527_E0.6610.43
200_P251_D0.6610.43
450_F486_I0.6610.43
321_V324_W0.6600.42
391_S397_V0.6580.42
497_N505_K0.6580.42
56_F297_P0.6580.42
231_G235_A0.6570.42
194_M492_L0.6570.42
439_L514_V0.6540.42
207_P497_N0.6510.42
192_G247_P0.6500.41
154_L216_G0.6500.41
298_V369_D0.6450.41
141_I474_L0.6440.41
500_G507_I0.6430.41
498_T502_V0.6430.41
77_L355_V0.6420.41
85_V89_F0.6420.41
117_Q416_P0.6410.41
533_V538_I0.6400.41
190_H194_M0.6400.41
320_L390_I0.6400.41
298_V389_I0.6360.40
508_S513_A0.6360.40
314_F427_A0.6350.40
67_A350_H0.6350.40
218_K273_N0.6340.40
77_L81_A0.6340.40
400_K403_I0.6340.40
436_S464_L0.6330.40
174_G199_L0.6330.40
209_W487_N0.6320.40
22_L26_I0.6310.40
196_G238_Q0.6310.40
257_V329_F0.6310.40
211_V227_A0.6290.40
154_L385_F0.6270.39
129_L427_A0.6260.39
22_L439_L0.6260.39
432_Y440_A0.6250.39
43_G162_I0.6240.39
57_A70_G0.6230.39
199_L468_D0.6230.39
28_F145_L0.6230.39
88_V137_A0.6230.39
46_T50_S0.6230.39
499_S550_Q0.6210.39
120_L266_L0.6200.39
300_S407_A0.6180.39
446_T528_L0.6180.39
97_S457_L0.6160.38
305_G319_V0.6160.38
26_I228_L0.6140.38
302_Y307_I0.6140.38
86_A385_F0.6130.38
169_A498_T0.6130.38
219_G433_S0.6130.38
51_I66_F0.6120.38
186_I494_V0.6120.38
170_F250_P0.6110.38
64_M68_A0.6110.38
468_D505_K0.6090.38
128_L317_L0.6070.38
315_L319_V0.6050.37
414_K418_L0.6050.37
451_P548_L0.6050.37
48_I190_H0.6050.37
308_I323_I0.6040.37
63_D319_V0.6020.37
19_L346_F0.6020.37
152_K155_Y0.6020.37
126_G166_A0.6000.37
178_L242_S0.5990.37
155_Y218_K0.5990.37
19_L26_I0.5980.37
19_L403_I0.5970.37
509_P513_A0.5970.37
25_I463_F0.5960.37
533_V537_L0.5960.37
117_Q444_A0.5960.37
254_S316_I0.5950.36
239_F546_I0.5950.36
117_Q317_L0.5940.36
200_P203_S0.5940.36
31_A233_S0.5930.36
434_G549_L0.5930.36
314_F384_I0.5920.36
83_I256_L0.5920.36
59_K62_I0.5920.36
128_L160_C0.5920.36
389_I548_L0.5910.36
82_W326_M0.5900.36
486_I548_L0.5900.36
215_D515_A0.5880.36
437_T441_L0.5880.36
470_S473_A0.5870.36
85_V116_L0.5870.36
20_V177_I0.5860.36
398_G452_F0.5850.36
15_G308_I0.5830.35
245_I253_T0.5830.35
309_R390_I0.5830.35
86_A384_I0.5820.35
323_I334_A0.5810.35
122_G503_T0.5800.35
112_D255_A0.5800.35
19_L57_A0.5800.35
172_A177_I0.5790.35
48_I146_L0.5780.35
212_A223_T0.5770.35
427_A509_P0.5760.35
39_G104_R0.5760.35
36_R101_D0.5760.35
189_F193_A0.5760.35
58_F412_S0.5750.35
122_G208_F0.5740.35
267_K301_E0.5740.35
154_L158_G0.5740.35
109_S265_F0.5730.35
183_V473_A0.5730.35
518_A528_L0.5720.34
420_I511_S0.5720.34
267_K548_L0.5720.34
91_Y95_V0.5720.34
114_Q155_Y0.5710.34
220_V373_K0.5710.34
430_T509_P0.5710.34
21_A489_S0.5700.34
444_A478_L0.5700.34
70_G316_I0.5700.34
128_L209_W0.5690.34
468_D472_N0.5690.34
427_A470_S0.5690.34
63_D394_I0.5680.34
102_I225_P0.5680.34
120_L323_I0.5680.34
450_F532_T0.5680.34
131_G311_W0.5680.34
55_I66_F0.5680.34
493_L496_A0.5670.34
36_R95_V0.5670.34
37_L42_A0.5660.34
104_R500_G0.5650.34
396_G529_F0.5650.34
169_A177_I0.5640.34
167_P234_F0.5630.34
181_G191_I0.5630.34
404_G407_A0.5620.34
166_A502_V0.5610.34
329_F355_V0.5610.34
487_N490_D0.5600.33
88_V103_I0.5600.33
103_I311_W0.5600.33
457_L473_A0.5590.33
439_L540_A0.5580.33
141_I213_M0.5580.33
197_R242_S0.5570.33
188_P323_I0.5570.33
123_F250_P0.5560.33
89_F406_F0.5560.33
15_G22_L0.5560.33
480_S484_Q0.5560.33
82_W385_F0.5560.33
192_G499_S0.5560.33
88_V173_L0.5540.33
83_I90_L0.5540.33
193_A196_G0.5540.33
139_V515_A0.5540.33
237_T241_T0.5530.33
70_G393_F0.5530.33
23_I394_I0.5520.33
323_I333_F0.5520.33
62_I398_G0.5520.33
329_F489_S0.5500.33
304_L398_G0.5490.33
240_F257_V0.5490.33
177_I498_T0.5480.32
26_I66_F0.5460.32
537_L541_S0.5450.32
501_G536_S0.5450.32
224_W303_S0.5450.32
220_V323_I0.5450.32
241_T245_I0.5440.32
455_P548_L0.5420.32
301_E344_I0.5420.32
21_A39_G0.5420.32
221_K263_A0.5410.32
54_A389_I0.5410.32
307_I315_L0.5400.32
226_A235_A0.5400.32
99_Q306_Q0.5400.32
186_I348_I0.5400.32
267_K304_L0.5380.32
85_V409_T0.5380.32
452_F455_P0.5380.32
132_A159_L0.5360.31
117_Q314_F0.5350.31
276_T279_S0.5350.31
232_G408_E0.5350.31
198_Q495_A0.5350.31
211_V355_V0.5340.31
183_V476_G0.5340.31
22_L443_L0.5330.31
327_K331_A0.5330.31
93_L397_V0.5330.31
114_Q278_I0.5310.31
201_F241_T0.5310.31
260_V369_D0.5300.31
250_P254_S0.5300.31
110_I319_V0.5300.31
127_A462_V0.5290.31
192_G236_V0.5290.31
164_N510_Q0.5290.31
403_I449_M0.5280.31
398_G403_I0.5280.31
137_A469_T0.5280.31
301_E488_V0.5270.31
127_A164_N0.5270.31
455_P509_P0.5270.31
162_I518_A0.5260.31
118_V122_G0.5250.31
16_L25_I0.5240.30
21_A234_F0.5240.30
510_Q514_V0.5230.30
242_S250_P0.5230.30
304_L308_I0.5230.30
347_Q390_I0.5220.30
119_L219_G0.5220.30
159_L376_P0.5200.30
87_A133_A0.5200.30
387_A480_S0.5200.30
419_S440_A0.5190.30
41_V256_L0.5180.30
178_L182_Q0.5180.30
49_L244_Y0.5180.30
47_L422_M0.5180.30
147_V202_L0.5180.30
468_D502_V0.5170.30
441_L478_L0.5170.30
368_M464_L0.5160.30
280_M386_I0.5150.30
358_A439_L0.5150.30
254_S320_L0.5130.30
344_I376_P0.5120.29
196_G251_D0.5120.29
29_F470_S0.5120.29
429_V440_A0.5100.29
514_V519_T0.5100.29
252_I452_F0.5090.29
334_A454_S0.5090.29
88_V314_F0.5090.29
31_A309_R0.5080.29
416_P501_G0.5080.29
138_P444_A0.5080.29
124_S127_A0.5080.29
161_L506_M0.5060.29
543_I553_V0.5060.29
159_L214_M0.5050.29
53_I56_F0.5040.29
414_K504_G0.5040.29
84_I542_V0.5030.29
428_F432_Y0.5030.29
183_V229_V0.5020.29
110_I265_F0.5010.29
213_M386_I0.5010.29
512_I547_T0.5010.29
209_W550_Q0.5010.29
40_H415_W0.5010.29
31_A34_V0.5010.29
372_F517_A0.5000.29
463_F512_I0.5000.29
468_D506_M0.5000.29
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
4r0cA 3 0.8 99.8 0.88 Contact Map
4r1iA 2 0.8214 99.7 0.886 Contact Map
4f35D 2 0.7179 99.6 0.891 Contact Map
3qe7A 2 0.4536 12.9 0.982 Contact Map
1j4nA 4 0.3696 8.6 0.984 Contact Map
3qnqA 2 0.4982 8.3 0.984 Contact Map
2i68A 2 0.1304 6.6 0.985 Contact Map
4x5mA 2 0.1607 6.2 0.985 Contact Map
5a63B 1 0.1518 5.3 0.985 Contact Map
4u9nA 2 0.2071 4.9 0.986 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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