GREMLIN Database
YGEV - Uncharacterized sigma-54-dependent transcriptional regulator YgeV
UniProt: Q46802 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG13052
Length: 592 (535)
Sequences: 1533 (1275)
Seq/√Len: 55.1

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
346_K355_N4.7001.00
301_E445_R4.6811.00
420_F425_K4.5031.00
330_A383_A4.0871.00
563_H572_E3.7721.00
419_Q423_E3.6111.00
362_Q396_P3.5941.00
552_E583_K3.4161.00
416_N419_Q3.4151.00
346_K353_S3.3941.00
559_A569_V3.3621.00
319_R406_D3.2761.00
477_V481_L3.2091.00
461_L494_S3.1581.00
575_I580_L3.0741.00
141_S144_F2.9371.00
345_V399_A2.9291.00
452_E482_R2.9271.00
141_S145_V2.7991.00
338_E384_K2.6891.00
553_K557_R2.6711.00
334_E380_M2.6311.00
456_H478_V2.6301.00
370_F412_A2.5451.00
269_I312_A2.4991.00
474_A511_D2.4961.00
393_E402_P2.4381.00
344_Y356_G2.4381.00
563_H569_V2.4291.00
133_F136_Y2.3941.00
549_E586_K2.3761.00
477_V510_I2.3151.00
395_L402_P2.3091.00
59_N64_R2.3071.00
307_E387_R2.3041.00
177_D181_R2.3031.00
236_G239_H2.2981.00
282_L309_V2.2691.00
130_L141_S2.2681.00
64_R68_E2.2641.00
562_R572_E2.2601.00
137_V140_I2.2601.00
98_F114_S2.2431.00
393_E404_Q2.2261.00
282_L439_I2.2201.00
415_Q420_F2.2151.00
394_I405_V2.1521.00
476_D512_S2.0981.00
346_K354_A2.0661.00
59_N68_E2.0271.00
137_V145_V2.0081.00
130_L145_V1.9681.00
360_L363_A1.9391.00
474_A477_V1.9361.00
311_R315_K1.9331.00
480_I512_S1.9241.00
73_K80_F1.9141.00
132_E140_I1.9121.00
140_I145_V1.9101.00
130_L137_V1.8961.00
584_I589_L1.8941.00
105_L108_R1.8780.99
74_V81_D1.8500.99
452_E478_V1.8380.99
454_L458_F1.8140.99
136_Y141_S1.8000.99
129_N133_F1.7970.99
422_A428_E1.7930.99
130_L140_I1.7890.99
361_I369_L1.7820.99
140_I144_F1.7730.99
473_I478_V1.7690.99
361_I405_V1.7360.99
142_T145_V1.7300.99
59_N62_L1.7270.99
286_I309_V1.7240.99
330_A376_D1.7190.99
556_I580_L1.7130.99
126_I129_N1.7120.99
369_L409_I1.7110.99
555_M559_A1.7020.99
291_P318_G1.7000.99
73_K76_T1.6980.99
420_F423_E1.6970.99
48_Y51_F1.6960.99
566_K577_I1.6780.99
451_I455_V1.6730.99
337_L381_L1.6710.99
274_G279_M1.6610.99
556_I569_V1.6530.99
97_A117_A1.6450.99
70_K73_K1.6330.99
272_L279_M1.6230.98
348_A397_I1.6170.98
68_E71_T1.6070.98
399_A403_I1.6060.98
500_L510_I1.5970.98
552_E556_I1.5960.98
74_V80_F1.5830.98
319_R407_I1.5800.98
64_R69_T1.5740.98
421_I424_G1.5730.98
159_S162_F1.5630.98
98_F116_I1.5460.98
62_L70_K1.5460.98
353_S357_K1.5330.98
267_P311_R1.5190.98
389_I409_I1.5110.98
128_D131_R1.5100.98
376_D414_N1.5080.98
296_V313_I1.5070.98
136_Y140_I1.5060.98
390_E494_S1.5030.98
129_N132_E1.4990.97
478_V482_R1.4910.97
137_V144_F1.4800.97
275_E453_L1.4800.97
473_I497_M1.4790.97
73_K81_D1.4760.97
136_Y145_V1.4690.97
307_E391_A1.4640.97
583_K587_Y1.4640.97
143_I146_S1.4570.97
548_L555_M1.4560.97
388_A391_A1.4560.97
417_L426_F1.4550.97
294_S502_N1.4430.97
136_Y144_F1.4330.97
366_T406_D1.4310.97
224_I227_W1.4310.97
59_N70_K1.4240.97
62_L73_K1.4160.96
551_M555_M1.4120.96
496_L500_L1.4060.96
299_V438_P1.4030.96
484_H487_P1.3920.96
294_S498_E1.3890.96
59_N71_T1.3840.96
131_R136_Y1.3780.96
548_L583_K1.3740.96
361_I407_I1.3670.96
64_R70_K1.3660.96
459_L501_V1.3570.95
132_E141_S1.3570.95
135_D144_F1.3570.95
554_Q558_E1.3550.95
568_Q571_D1.3550.95
132_E135_D1.3540.95
566_K581_Y1.3520.95
474_A509_V1.3500.95
418_A518_N1.3490.95
136_Y143_I1.3400.95
74_V78_S1.3260.95
310_A324_F1.3230.95
304_T441_L1.3220.95
129_N136_Y1.3190.95
444_L493_L1.3160.95
477_V519_L1.3150.95
224_I233_L1.3090.94
557_R589_L1.3070.94
62_L68_E1.3050.94
556_I583_K1.3040.94
64_R71_T1.3010.94
188_T191_K1.2950.94
132_E136_Y1.2920.94
172_G186_N1.2910.94
298_V309_V1.2890.94
557_R561_S1.2830.94
289_I437_I1.2820.94
279_M282_L1.2800.94
568_Q572_E1.2710.93
477_V512_S1.2670.93
283_K309_V1.2650.93
360_L395_L1.2590.93
130_L134_S1.2580.93
559_A563_H1.2540.93
375_G413_T1.2450.93
455_V473_I1.2450.93
75_V80_F1.2430.93
440_T446_E1.2430.93
299_V413_T1.2400.93
59_N69_T1.2350.92
283_K287_S1.2320.92
387_R391_A1.2320.92
185_V189_A1.2310.92
452_E455_V1.2300.92
476_D511_D1.2300.92
68_E88_D1.2290.92
130_L144_F1.2270.92
73_K83_L1.2270.92
134_S144_F1.2210.92
579_T582_R1.2200.92
134_S140_I1.2190.92
429_D433_R1.2180.92
128_D136_Y1.2160.92
458_F497_M1.2120.92
455_V497_M1.2090.92
132_E143_I1.2010.91
128_D140_I1.1890.91
75_V78_S1.1890.91
567_K577_I1.1760.91
75_V83_L1.1750.90
472_G509_V1.1710.90
270_E287_S1.1710.90
334_E338_E1.1680.90
392_R404_Q1.1670.90
369_L405_V1.1640.90
39_L43_A1.1610.90
41_R44_G1.1560.90
516_P519_L1.1550.90
78_S104_I1.1530.90
479_E483_K1.1510.90
386_L429_D1.1490.89
292_S502_N1.1430.89
361_I388_A1.1410.89
307_E390_E1.1390.89
507_G514_L1.1380.89
136_Y146_S1.1370.89
142_T146_S1.1350.89
290_A408_R1.1330.89
365_N406_D1.1290.89
73_K78_S1.1180.88
288_R506_S1.1180.88
548_L551_M1.1160.88
473_I510_I1.1160.88
40_C61_R1.1150.88
104_I109_C1.1060.88
43_A47_A1.1010.87
174_L189_A1.1010.87
62_L72_E1.0980.87
373_E412_A1.0960.87
71_T100_G1.0950.87
411_S434_L1.0920.87
471_P501_V1.0900.87
61_R67_L1.0900.87
448_Q451_I1.0850.87
132_E139_H1.0800.86
433_R491_R1.0790.86
229_D232_E1.0780.86
348_A352_A1.0750.86
560_L569_V1.0700.86
63_L66_V1.0680.86
93_C116_I1.0660.86
339_S349_F1.0660.86
335_Q338_E1.0630.85
333_P338_E1.0630.85
372_D491_R1.0620.85
62_L71_T1.0610.85
375_G414_N1.0600.85
350_T433_R1.0570.85
301_E443_P1.0570.85
129_N143_I1.0560.85
244_R247_F1.0520.85
309_V441_L1.0500.85
365_N405_V1.0500.85
443_P446_E1.0420.84
516_P520_L1.0420.84
88_D98_F1.0410.84
386_L427_R1.0410.84
36_D39_L1.0360.84
271_Q315_K1.0310.84
475_P479_E1.0310.84
278_V446_E1.0290.84
90_K93_C1.0270.83
134_S145_V1.0270.83
304_T409_I1.0230.83
374_I377_M1.0170.83
427_R491_R1.0170.83
312_A316_L1.0120.82
298_V441_L1.0100.82
140_I143_I1.0090.82
196_V199_N1.0080.82
137_V141_S1.0010.82
352_A375_G0.9960.81
337_L384_K0.9960.81
71_T74_V0.9930.81
67_L90_K0.9880.81
93_C96_K0.9860.81
189_A193_L0.9840.81
190_L197_Q0.9790.80
462_H497_M0.9770.80
577_I581_Y0.9730.80
279_M283_K0.9660.79
174_L182_V0.9640.79
576_G581_Y0.9620.79
419_Q422_A0.9560.79
373_E429_D0.9550.79
448_Q485_R0.9550.79
326_A387_R0.9520.78
143_I147_K0.9490.78
387_R429_D0.9490.78
59_N63_L0.9490.78
560_L584_I0.9470.78
295_S411_S0.9460.78
344_Y349_F0.9440.78
126_I130_L0.9440.78
48_Y52_L0.9390.77
132_E146_S0.9390.77
409_I434_L0.9380.77
352_A433_R0.9370.77
74_V77_Q0.9370.77
126_I135_D0.9320.77
268_H271_Q0.9310.77
185_V200_I0.9290.77
269_I272_L0.9280.77
275_E280_R0.9280.77
70_K88_D0.9260.76
547_A550_E0.9250.76
126_I133_F0.9250.76
484_H519_L0.9230.76
333_P336_L0.9220.76
59_N88_D0.9210.76
394_I404_Q0.9180.76
334_E384_K0.9160.76
363_A399_A0.9160.76
128_D133_F0.9110.75
62_L69_T0.9110.75
427_R433_R0.9080.75
307_E326_A0.9060.75
499_Y502_N0.9060.75
548_L552_E0.9040.75
372_D412_A0.9030.75
241_I248_L0.9010.75
272_L312_A0.8960.74
569_V578_A0.8950.74
235_I241_I0.8940.74
500_L514_L0.8900.74
477_V516_P0.8900.74
160_K163_A0.8890.74
504_V514_L0.8890.74
130_L136_Y0.8880.73
78_S81_D0.8860.73
229_D233_L0.8750.72
135_D141_S0.8660.72
307_E414_N0.8650.71
364_A407_I0.8650.71
60_S64_R0.8640.71
75_V81_D0.8640.71
500_L504_V0.8610.71
578_A582_R0.8610.71
466_L502_N0.8580.71
459_L473_I0.8560.71
567_K578_A0.8560.71
133_F140_I0.8560.71
552_E587_Y0.8520.70
484_H518_N0.8500.70
80_F83_L0.8500.70
128_D132_E0.8490.70
63_L70_K0.8480.70
350_T429_D0.8450.70
64_R73_K0.8440.70
550_E554_Q0.8440.70
209_P215_N0.8440.70
78_S82_P0.8440.70
567_K571_D0.8430.69
477_V511_D0.8400.69
134_S141_S0.8380.69
132_E147_K0.8370.69
130_L133_F0.8350.69
575_I583_K0.8330.69
234_I237_Q0.8320.68
338_E380_M0.8310.68
68_E89_S0.8310.68
576_G582_R0.8300.68
161_I492_E0.8280.68
569_V572_E0.8260.68
39_L42_V0.8250.68
578_A581_Y0.8250.68
74_V82_P0.8230.68
313_I360_L0.8220.68
290_A313_I0.8210.67
131_R143_I0.8200.67
336_L427_R0.8200.67
134_S142_T0.8200.67
56_L96_K0.8180.67
269_I283_K0.8150.67
273_V457_Y0.8140.67
173_V285_L0.8130.67
328_N386_L0.8090.66
418_A422_A0.8090.66
463_T471_P0.8090.66
236_G240_N0.8090.66
484_H492_E0.8090.66
224_I229_D0.8080.66
375_G415_Q0.8080.66
77_Q80_F0.8060.66
75_V86_G0.8050.66
559_A575_I0.8030.66
68_E72_E0.8020.66
441_L490_L0.8010.66
49_G52_L0.7990.65
135_D143_I0.7980.65
349_F352_A0.7970.65
61_R66_V0.7970.65
376_D415_Q0.7950.65
242_Q245_Q0.7950.65
479_E482_R0.7940.65
226_S229_D0.7940.65
362_Q403_I0.7930.65
330_A338_E0.7880.64
41_R70_K0.7860.64
80_F84_C0.7860.64
344_Y429_D0.7850.64
287_S316_L0.7840.64
84_C87_C0.7840.64
333_P337_L0.7820.64
344_Y353_S0.7820.64
399_A402_P0.7810.64
228_D233_L0.7790.63
71_T88_D0.7780.63
265_D311_R0.7780.63
135_D142_T0.7780.63
176_V182_V0.7770.63
272_L441_L0.7770.63
74_V83_L0.7760.63
426_F430_L0.7760.63
373_E433_R0.7750.63
387_R427_R0.7720.63
375_G412_A0.7710.63
377_M548_L0.7670.62
471_P508_E0.7670.62
510_I515_L0.7660.62
429_D491_R0.7630.62
328_N350_T0.7620.62
210_L215_N0.7600.61
64_R72_E0.7580.61
417_L424_G0.7580.61
223_H227_W0.7560.61
76_T80_F0.7560.61
74_V85_E0.7550.61
159_S163_A0.7520.61
554_Q557_R0.7490.60
133_F146_S0.7460.60
152_Q155_G0.7460.60
272_L308_V0.7440.60
41_R45_T0.7440.60
339_S433_R0.7430.60
269_I286_I0.7430.60
88_D96_K0.7420.60
336_L348_A0.7420.60
558_E562_R0.7410.59
75_V112_V0.7400.59
97_A116_I0.7390.59
421_I428_E0.7380.59
81_D86_G0.7360.59
140_I146_S0.7350.59
404_Q434_L0.7340.59
507_G511_D0.7340.59
169_M302_S0.7270.58
339_S429_D0.7270.58
64_R88_D0.7250.58
398_G433_R0.7240.58
132_E145_V0.7230.58
330_A384_K0.7210.57
36_D43_A0.7210.57
375_G433_R0.7210.57
128_D144_F0.7200.57
40_C43_A0.7190.57
563_H568_Q0.7190.57
339_S491_R0.7180.57
411_S492_E0.7160.57
249_M252_H0.7150.57
294_S436_V0.7150.57
83_L86_G0.7150.57
82_P99_L0.7150.57
265_D315_K0.7120.56
289_I361_I0.7100.56
137_V146_S0.7100.56
545_G559_A0.7090.56
336_L339_S0.7070.56
328_N356_G0.7070.56
36_D46_G0.7070.56
182_V207_F0.7050.56
556_I589_L0.7050.56
289_I577_I0.7040.56
350_T373_E0.7030.55
386_L433_R0.7000.55
131_R134_S0.6990.55
80_F85_E0.6980.55
113_I337_L0.6980.55
455_V482_R0.6980.55
286_I439_I0.6970.55
72_E93_C0.6970.55
59_N73_K0.6970.55
344_Y350_T0.6960.55
41_R72_E0.6950.55
249_M254_S0.6940.55
387_R414_N0.6900.54
302_S411_S0.6900.54
222_Q227_W0.6890.54
129_N145_V0.6880.54
144_F147_K0.6870.54
68_E80_F0.6860.54
418_A521_N0.6860.54
356_G394_I0.6850.54
545_G550_E0.6850.54
276_C436_V0.6830.53
73_K82_P0.6820.53
350_T368_T0.6810.53
314_H368_T0.6790.53
248_L258_F0.6750.52
186_N319_R0.6750.52
359_G373_E0.6750.52
70_K74_V0.6750.52
282_L286_I0.6740.52
100_G114_S0.6710.52
398_G429_D0.6710.52
44_G53_G0.6690.52
336_L398_G0.6680.52
566_K571_D0.6650.51
336_L350_T0.6640.51
99_L492_E0.6640.51
344_Y375_G0.6630.51
500_L515_L0.6630.51
462_H501_V0.6630.51
299_V440_T0.6620.51
269_I273_V0.6620.51
135_D138_R0.6620.51
365_N394_I0.6610.51
352_A429_D0.6600.51
90_K94_R0.6600.51
84_C93_C0.6600.51
358_T400_S0.6560.50
307_E427_R0.6560.50
322_K366_T0.6560.50
246_L249_M0.6550.50
55_Q67_L0.6550.50
267_P271_Q0.6540.50
88_D114_S0.6540.50
498_E502_N0.6530.50
352_A427_R0.6530.50
290_A492_E0.6520.50
126_I136_Y0.6520.50
138_R142_T0.6510.50
345_V413_T0.6510.50
36_D41_R0.6500.50
462_H498_E0.6500.50
240_N247_F0.6500.50
267_P270_E0.6490.50
375_G429_D0.6470.49
67_L93_C0.6470.49
289_I439_I0.6430.49
454_L457_Y0.6430.49
349_F373_E0.6430.49
46_G56_L0.6420.49
373_E427_R0.6400.49
373_E398_G0.6390.49
407_I435_N0.6390.49
338_E582_R0.6380.48
452_E456_H0.6380.48
196_V526_E0.6350.48
387_R491_R0.6350.48
169_M173_V0.6350.48
54_R67_L0.6350.48
54_R96_K0.6350.48
135_D145_V0.6340.48
128_D143_I0.6340.48
342_F359_G0.6340.48
565_S584_I0.6330.48
129_N142_T0.6330.48
506_S514_L0.6320.48
73_K77_Q0.6320.48
77_Q85_E0.6270.47
37_E78_S0.6270.47
132_E144_F0.6270.47
307_E373_E0.6270.47
363_A400_S0.6260.47
359_G433_R0.6260.47
101_T137_V0.6260.47
333_P376_D0.6240.47
439_I570_A0.6230.47
346_K356_G0.6220.47
336_L491_R0.6220.47
339_S344_Y0.6220.47
84_C97_A0.6210.47
398_G427_R0.6180.46
350_T386_L0.6180.46
349_F414_N0.6180.46
100_G112_V0.6170.46
547_A551_M0.6160.46
70_K89_S0.6160.46
328_N432_Y0.6140.46
274_G283_K0.6130.46
250_A253_Q0.6130.46
248_L252_H0.6130.46
267_P315_K0.6130.46
376_D427_R0.6120.46
415_Q431_F0.6120.46
64_R89_S0.6120.46
336_L344_Y0.6110.46
155_G158_I0.6110.46
42_V58_G0.6100.45
360_L396_P0.6080.45
250_A254_S0.6060.45
158_I173_V0.6050.45
78_S83_L0.6040.45
302_S433_R0.6040.45
157_N160_K0.6040.45
368_T500_L0.6040.45
312_A500_L0.6030.45
41_R47_A0.6030.45
276_C279_M0.6020.45
336_L373_E0.6020.45
63_L68_E0.6020.45
476_D480_I0.6020.45
36_D42_V0.6010.45
299_V414_N0.6000.44
294_S466_L0.5990.44
93_C118_V0.5990.44
126_I141_S0.5990.44
238_L241_I0.5980.44
136_Y142_T0.5980.44
51_F60_S0.5980.44
243_G246_L0.5980.44
383_A409_I0.5970.44
349_F375_G0.5960.44
85_E94_R0.5960.44
339_S350_T0.5960.44
556_I575_I0.5960.44
580_L583_K0.5940.44
359_G398_G0.5930.44
59_N80_F0.5930.44
499_Y503_V0.5920.44
128_D134_S0.5910.43
331_A338_E0.5910.43
141_S146_S0.5910.43
59_N89_S0.5900.43
351_G372_D0.5900.43
332_I339_S0.5900.43
548_L556_I0.5890.43
69_T77_Q0.5890.43
336_L387_R0.5890.43
342_F398_G0.5880.43
222_Q225_V0.5870.43
350_T375_G0.5870.43
82_P86_G0.5870.43
553_K583_K0.5850.43
344_Y351_G0.5850.43
372_D387_R0.5840.43
283_K286_I0.5830.43
377_M383_A0.5830.43
93_C113_I0.5820.43
129_N140_I0.5810.42
344_Y373_E0.5810.42
555_M558_E0.5810.42
398_G491_R0.5800.42
435_N495_N0.5800.42
351_G433_R0.5800.42
319_R322_K0.5790.42
349_F433_R0.5790.42
252_H255_H0.5790.42
336_L375_G0.5780.42
289_I360_L0.5780.42
41_R51_F0.5750.42
251_F256_T0.5750.42
477_V500_L0.5750.42
235_I238_L0.5740.42
378_P383_A0.5740.42
359_G429_D0.5730.42
60_S63_L0.5730.42
342_F433_R0.5730.42
135_D140_I0.5720.41
111_G575_I0.5710.41
208_R211_T0.5700.41
340_E344_Y0.5690.41
336_L349_F0.5690.41
173_V186_N0.5690.41
70_K83_L0.5680.41
336_L429_D0.5680.41
342_F373_E0.5670.41
56_L62_L0.5670.41
166_I565_S0.5670.41
336_L414_N0.5660.41
454_L573_L0.5650.41
414_N433_R0.5650.41
328_N429_D0.5650.41
307_E491_R0.5650.41
134_S137_V0.5640.41
193_L315_K0.5640.41
345_V400_S0.5640.41
243_G248_L0.5630.41
223_H247_F0.5620.40
274_G298_V0.5610.40
352_A373_E0.5590.40
358_T399_A0.5590.40
328_N336_L0.5580.40
392_R406_D0.5580.40
279_M309_V0.5570.40
333_P375_G0.5560.40
210_L216_F0.5560.40
352_A397_I0.5560.40
342_F429_D0.5550.40
44_G48_Y0.5550.40
351_G491_R0.5540.40
130_L143_I0.5540.40
285_L571_D0.5530.40
333_P399_A0.5530.40
286_I316_L0.5530.40
344_Y433_R0.5530.40
129_N135_D0.5520.39
103_V111_G0.5520.39
556_I573_L0.5510.39
59_N74_V0.5510.39
386_L491_R0.5510.39
370_F388_A0.5500.39
56_L59_N0.5500.39
336_L351_G0.5500.39
339_S386_L0.5500.39
68_E74_V0.5500.39
389_I584_I0.5490.39
349_F429_D0.5490.39
443_P460_H0.5480.39
39_L46_G0.5480.39
307_E429_D0.5470.39
40_C56_L0.5470.39
73_K85_E0.5450.39
374_I405_V0.5450.39
62_L67_L0.5430.38
372_D427_R0.5430.38
372_D433_R0.5420.38
68_E73_K0.5420.38
268_H311_R0.5420.38
347_G373_E0.5410.38
294_S437_I0.5400.38
574_G577_I0.5400.38
38_N52_L0.5400.38
55_Q90_K0.5400.38
254_S257_S0.5400.38
292_S498_E0.5400.38
481_L519_L0.5390.38
319_R441_L0.5390.38
126_I140_I0.5390.38
412_A429_D0.5390.38
46_G71_T0.5390.38
134_S146_S0.5380.38
68_E87_C0.5370.38
390_E411_S0.5360.38
322_K362_Q0.5360.38
235_I247_F0.5360.38
277_R431_F0.5350.38
326_A394_I0.5330.37
60_S73_K0.5330.37
47_A51_F0.5320.37
129_N137_V0.5320.37
240_N248_L0.5320.37
59_N72_E0.5310.37
217_T220_H0.5310.37
339_S398_G0.5300.37
175_V366_T0.5300.37
357_K413_T0.5280.37
373_E414_N0.5280.37
458_F494_S0.5270.37
304_T324_F0.5260.37
326_A356_G0.5250.37
302_S376_D0.5250.37
56_L73_K0.5240.37
336_L433_R0.5240.37
361_I492_E0.5240.37
387_R433_R0.5230.36
344_Y412_A0.5220.36
237_Q241_I0.5200.36
336_L352_A0.5200.36
370_F491_R0.5180.36
234_I327_I0.5180.36
39_L70_K0.5180.36
132_E137_V0.5180.36
477_V514_L0.5180.36
62_L88_D0.5170.36
376_D433_R0.5170.36
77_Q335_Q0.5170.36
412_A427_R0.5160.36
347_G350_T0.5150.36
245_Q248_L0.5150.36
133_F137_V0.5150.36
248_L251_F0.5140.36
68_E114_S0.5140.36
126_I145_V0.5130.35
307_E386_L0.5130.35
436_V498_E0.5130.35
281_Q285_L0.5120.35
298_V439_I0.5110.35
448_Q452_E0.5110.35
272_L309_V0.5110.35
273_V436_V0.5110.35
302_S427_R0.5110.35
289_I378_P0.5100.35
243_G365_N0.5100.35
363_A396_P0.5080.35
83_L88_D0.5070.35
213_E219_G0.5070.35
208_R212_F0.5070.35
232_E589_L0.5060.35
307_E433_R0.5060.35
334_E582_R0.5060.35
333_P384_K0.5050.35
496_L571_D0.5050.35
328_N388_A0.5040.35
267_P287_S0.5020.34
458_F462_H0.5020.34
350_T356_G0.5010.34
328_N331_A0.5000.34
436_V495_N0.5000.34
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
4l4uA 2 0.6182 100 0.434 Contact Map
1ojlA 3 0.5068 100 0.558 Contact Map
3dzdA 2 0.5929 100 0.567 Contact Map
4fwgA 3 0.6199 100 0.697 Contact Map
4qhsA 3 0.4122 100 0.732 Contact Map
4qosA 1 0.4054 100 0.737 Contact Map
1r6bX 1 0.7635 100 0.754 Contact Map
1qvrA 3 0.8176 100 0.763 Contact Map
4ciuA 1 0.8159 100 0.765 Contact Map
1in4A 1 0.4443 100 0.766 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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