GREMLIN Database
XDHA - Xanthine dehydrogenase molybdenum-binding subunit
UniProt: Q46799 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG13049
Length: 752 (718)
Sequences: 5374 (3511)
Seq/√Len: 131.0

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
50_L117_L4.7401.00
30_V118_V4.3071.00
171_Q285_Q4.2501.00
25_C54_L4.0331.00
107_D110_T3.7951.00
381_L408_E3.6671.00
46_Q119_S3.6641.00
34_I37_G3.5621.00
173_H283_D3.5581.00
415_E418_K3.4631.00
289_N293_T3.4111.00
288_V368_A3.4021.00
486_V527_L3.3321.00
298_S333_A3.3111.00
167_D289_N3.2281.00
40_V121_E3.1691.00
374_I382_R3.1301.00
167_D290_R3.1161.00
38_Y123_Q3.1061.00
50_L110_T3.0851.00
465_I492_V3.0741.00
294_L365_L3.0201.00
30_V115_A3.0141.00
161_Q165_A2.9591.00
37_G122_W2.9421.00
158_N161_Q2.8871.00
171_Q283_D2.8481.00
54_L106_R2.8431.00
489_T532_L2.7981.00
34_I124_E2.7651.00
300_D335_S2.7321.00
378_E382_R2.6751.00
36_H125_L2.6531.00
104_V253_T2.6371.00
285_Q298_S2.6201.00
41_S121_E2.6131.00
201_I215_V2.5761.00
328_P389_D2.4451.00
106_R110_T2.4311.00
625_R690_E2.4291.00
430_L613_T2.3921.00
528_R532_L2.3901.00
200_T229_I2.3801.00
293_T382_R2.3781.00
721_R737_L2.3751.00
27_A263_V2.3301.00
40_V123_Q2.3231.00
374_I379_I2.2781.00
44_D48_R2.2681.00
559_H570_L2.2661.00
106_R259_I2.2571.00
734_T741_R2.2461.00
132_E281_T2.2441.00
192_W202_V2.2331.00
163_I287_G2.2271.00
227_R504_D2.2151.00
300_D337_K2.2021.00
414_F609_F2.1911.00
198_R506_D2.1721.00
304_N343_L2.1691.00
368_A379_I2.1611.00
613_T624_N2.1591.00
133_A136_A2.1351.00
724_V737_L2.1331.00
286_M364_M2.0561.00
27_A102_I2.0441.00
29_Y249_A2.0431.00
155_S333_A2.0421.00
409_K412_K2.0421.00
33_P100_V2.0331.00
664_D667_S2.0291.00
464_T496_D2.0031.00
166_A287_G2.0031.00
409_K692_A1.9821.00
649_M689_L1.9821.00
410_G609_F1.9741.00
378_E381_L1.9591.00
168_Y288_V1.9501.00
44_D56_I1.9401.00
408_E412_K1.9401.00
459_M534_L1.9351.00
381_L411_R1.9331.00
175_Q734_T1.9311.00
293_T328_P1.9221.00
457_L467_V1.9061.00
650_G686_L1.8991.00
168_Y290_R1.8851.00
535_K539_I1.8741.00
284_G364_M1.8401.00
17_D262_K1.8371.00
549_S552_N1.8321.00
43_N119_S1.8221.00
45_E48_R1.8161.00
483_S499_V1.8131.00
38_Y91_R1.8101.00
377_V411_R1.8091.00
47_A118_V1.8071.00
464_T498_R1.8051.00
130_T133_A1.7991.00
485_M524_A1.7841.00
38_Y92_H1.7801.00
493_P496_D1.7801.00
386_R404_P1.7731.00
520_S636_L1.7671.00
54_L259_I1.7581.00
198_R225_C1.7491.00
34_I122_W1.7421.00
46_Q117_L1.7401.00
188_T264_S1.7341.00
105_A111_A1.7191.00
460_N466_N1.7181.00
104_V257_G1.7061.00
432_R613_T1.7051.00
27_A261_V1.7011.00
610_V719_A1.6981.00
641_A708_L1.6771.00
460_N464_T1.6731.00
102_I253_T1.6691.00
413_I690_E1.6691.00
289_N295_K1.6631.00
621_V742_L1.6621.00
182_C675_L1.6471.00
21_M24_M1.6471.00
608_T626_I1.6101.00
183_H239_N1.6091.00
286_M368_A1.6081.00
455_A527_L1.6071.00
409_K413_I1.6051.00
286_M294_L1.5971.00
738_T741_R1.5951.00
50_L114_A1.5941.00
465_I490_V1.5941.00
572_S575_D1.5901.00
439_F606_G1.5871.00
55_A256_L1.5821.00
163_I285_Q1.5751.00
634_H695_E1.5731.00
102_I249_A1.5701.00
173_H281_T1.5621.00
115_A118_V1.5541.00
431_R616_I1.5471.00
467_V486_V1.5461.00
166_A295_K1.5421.00
626_I649_M1.5411.00
36_H92_H1.5411.00
429_N615_D1.5401.00
53_V105_A1.5351.00
370_T725_K1.5341.00
635_I693_F1.5321.00
168_Y371_A1.5291.00
457_L531_A1.5291.00
46_Q49_S1.5271.00
610_V626_I1.5251.00
402_G405_E1.5241.00
200_T227_R1.4951.00
283_D300_D1.4951.00
160_Q164_D1.4941.00
16_T188_T1.4911.00
489_T703_Y1.4781.00
404_P408_E1.4761.00
155_S158_N1.4751.00
641_A693_F1.4741.00
429_N616_I1.4731.00
60_E91_R1.4681.00
160_Q333_A1.4681.00
48_R55_A1.4631.00
539_I553_L1.4541.00
21_M192_W1.4391.00
29_Y263_V1.4381.00
411_R417_E1.4341.00
24_M262_K1.4281.00
632_S635_I1.4251.00
381_L404_P1.4241.00
215_V226_V1.4121.00
652_G716_V1.4101.00
410_G607_C1.4091.00
168_Y368_A1.4061.00
553_L560_I1.4061.00
370_T726_M1.4061.00
169_Q285_Q1.4031.00
168_Y289_N1.4021.00
221_I226_V1.4011.00
556_I561_V1.3981.00
413_I692_A1.3961.00
625_R688_Q1.3901.00
17_D264_S1.3871.00
487_A497_V1.3861.00
168_Y372_L1.3791.00
623_I653_I1.3751.00
366_D722_N1.3731.00
291_D382_R1.3721.00
163_I296_G1.3681.00
151_Q335_S1.3591.00
294_L329_R1.3551.00
406_C607_C1.3531.00
489_T528_R1.3531.00
533_L536_E1.3511.00
39_A42_I1.3431.00
222_P225_C1.3391.00
430_L622_T1.3391.00
621_V724_V1.3361.00
482_F527_L1.3321.00
529_S533_L1.3231.00
199_I221_I1.3181.00
654_G681_P1.3171.00
413_I629_V1.3161.00
481_V520_S1.3141.00
39_A120_I1.3141.00
305_T312_G1.3101.00
175_Q281_T1.3101.00
485_M520_S1.3091.00
386_R389_D1.3061.00
25_C259_I1.3011.00
172_G367_D1.2981.00
216_G226_V1.2951.00
362_E380_R1.2881.00
113_K117_L1.2861.00
627_L690_E1.2781.00
429_N617_A1.2771.00
349_M651_M1.2761.00
57_F257_G1.2751.00
288_V372_L1.2741.00
191_A201_I1.2741.00
372_L379_I1.2721.00
612_L724_V1.2711.00
540_A550_A1.2711.00
13_A232_F1.2561.00
635_I641_A1.2561.00
554_T561_V1.2551.00
162_T296_G1.2551.00
100_V120_I1.2501.00
614_V621_V1.2491.00
92_H125_L1.2471.00
253_T261_V1.2421.00
162_T331_A1.2351.00
562_L565_R1.2331.00
282_I360_A1.2281.00
279_A304_N1.2281.00
28_K115_A1.2281.00
94_R98_D1.2241.00
159_V163_I1.2241.00
430_L615_D1.2231.00
619_C742_L1.2211.00
484_Q637_N1.2201.00
151_Q337_K1.2121.00
410_G629_V1.2090.99
57_F253_T1.2060.99
414_F627_L1.2040.99
135_L148_L1.2040.99
275_R347_G1.2030.99
21_M190_L1.2020.99
153_T335_S1.1980.99
213_R223_W1.1980.99
36_H126_P1.1970.99
31_R269_E1.1960.99
629_V692_A1.1940.99
33_P122_W1.1880.99
28_K108_E1.1830.99
191_A254_S1.1820.99
163_I169_Q1.1740.99
662_I672_N1.1720.99
38_Y125_L1.1720.99
366_D376_P1.1650.99
182_C680_M1.1630.99
533_L537_K1.1600.99
645_V649_M1.1580.99
412_K417_E1.1520.99
367_D733_N1.1510.99
159_V162_T1.1500.99
302_L337_K1.1500.99
88_L249_A1.1480.99
36_H342_N1.1430.99
359_F721_R1.1400.99
483_S494_V1.1390.99
110_T114_A1.1370.99
552_N563_V1.1350.99
172_G371_A1.1340.99
199_I251_F1.1340.99
538_I576_L1.1310.99
59_W90_T1.1290.99
161_Q164_D1.1290.99
160_Q298_S1.1280.99
191_A250_A1.1270.99
621_V657_L1.1260.99
384_A407_L1.1260.99
525_P528_R1.1250.99
456_R468_Q1.1240.99
136_A139_A1.1230.99
202_V229_I1.1230.99
406_C629_V1.1220.99
114_A117_L1.1210.99
552_N564_E1.1210.99
377_V436_V1.1190.99
432_R611_D1.1180.99
28_K112_E1.1180.99
24_M190_L1.1170.99
219_L251_F1.1130.99
288_V379_I1.1110.99
20_V24_M1.1100.99
7_A12_R1.1100.99
420_R423_C1.1060.99
53_V111_A1.1050.99
6_I10_T1.1040.99
432_R624_N1.1040.99
288_V294_L1.0970.99
28_K111_A1.0940.99
320_G334_Y1.0910.99
3_V483_S1.0900.99
555_L560_I1.0850.99
41_S119_S1.0830.99
3_V480_T1.0820.99
183_H270_C1.0810.99
42_I120_I1.0810.99
57_F256_L1.0780.99
25_C257_G1.0770.99
484_Q638_P1.0750.99
100_V122_W1.0730.99
409_K629_V1.0700.99
496_D558_G1.0690.99
365_L379_I1.0690.99
286_M297_Y1.0660.99
740_K744_E1.0650.99
732_I737_L1.0650.99
54_L110_T1.0630.99
165_A295_K1.0630.99
405_E409_K1.0600.99
170_V371_A1.0590.99
29_Y102_I1.0590.99
378_E417_E1.0580.99
37_G125_L1.0580.99
53_V114_A1.0570.99
610_V623_I1.0570.99
631_D696_I1.0550.99
143_H340_Y1.0490.99
287_G295_K1.0480.99
50_L113_K1.0470.99
419_R611_D1.0460.99
23_G259_I1.0460.99
233_V474_I1.0450.99
480_T484_Q1.0430.99
174_Y364_M1.0420.98
466_N500_I1.0410.98
153_T333_A1.0390.98
58_T88_L1.0370.98
561_V570_L1.0370.98
162_T287_G1.0310.98
132_E175_Q1.0310.98
539_I555_L1.0310.98
37_G120_I1.0250.98
92_H144_N1.0230.98
54_L104_V1.0230.98
657_L720_I1.0220.98
467_V497_V1.0210.98
170_V288_V1.0170.98
39_A100_V1.0150.98
486_V531_A1.0140.98
135_L339_C1.0130.98
468_Q500_I1.0130.98
194_E200_T1.0130.98
194_E198_R1.0120.98
663_I670_V1.0110.98
193_M255_K1.0070.98
236_G474_I1.0060.98
93_V122_W1.0000.98
163_I298_S0.9990.98
204_S240_K0.9970.98
108_E112_E0.9970.98
131_P302_L0.9950.98
167_D295_K0.9940.98
658_F685_D0.9850.98
287_G296_G0.9850.98
653_I686_L0.9830.98
193_M254_S0.9800.98
101_A118_V0.9740.98
536_E540_A0.9740.98
55_A257_G0.9740.98
57_F104_V0.9690.98
147_N150_K0.9680.98
664_D669_V0.9670.98
420_R726_M0.9660.98
192_W200_T0.9650.98
384_A404_P0.9640.98
165_A289_N0.9640.98
532_L536_E0.9640.98
582_Y585_E0.9590.97
405_E694_V0.9580.97
660_E741_R0.9560.97
62_V252_L0.9560.97
737_L742_L0.9540.97
737_L741_R0.9530.97
366_D380_R0.9520.97
42_I118_V0.9510.97
489_T531_A0.9510.97
181_H239_N0.9490.97
212_R223_W0.9490.97
541_H576_L0.9480.97
159_V298_S0.9460.97
552_N562_L0.9430.97
36_H127_V0.9420.97
98_D308_Y0.9390.97
180_Q661_M0.9360.97
101_A120_I0.9350.97
674_N677_D0.9340.97
421_A424_Q0.9330.97
132_E173_H0.9330.97
51_P106_R0.9330.97
59_W91_R0.9290.97
170_V286_M0.9270.97
44_D118_V0.9270.97
103_V115_A0.9250.97
135_L302_L0.9220.97
489_T535_K0.9210.97
278_H356_Q0.9210.97
162_T295_K0.9200.97
612_L623_I0.9200.97
486_V497_V0.9180.97
407_L436_V0.9160.97
221_I225_C0.9160.97
189_S250_A0.9160.97
535_K555_L0.9130.97
458_L468_Q0.9130.97
128_I134_A0.9120.97
610_V720_I0.9110.96
159_V296_G0.9110.96
302_L339_C0.9100.96
377_V407_L0.9090.96
548_Q562_L0.9070.96
485_M636_L0.9060.96
608_T716_V0.9060.96
545_M548_Q0.9050.96
192_W254_S0.9010.96
7_A479_D0.9010.96
206_Q236_G0.8980.96
56_I101_A0.8970.96
227_R506_D0.8950.96
642_E693_F0.8940.96
8_K15_Y0.8900.96
538_I573_L0.8900.96
250_A263_V0.8890.96
280_F319_G0.8880.96
425_N428_G0.8860.96
268_E673_P0.8850.96
477_G640_L0.8850.96
642_E646_H0.8850.96
193_M197_S0.8850.96
159_V333_A0.8840.96
159_V331_A0.8830.96
57_F252_L0.8820.96
221_I255_K0.8820.96
591_S594_S0.8800.96
559_H572_S0.8750.96
471_A519_Q0.8750.96
111_A115_A0.8730.96
30_V101_A0.8730.96
430_L616_I0.8710.95
241_Q515_F0.8700.95
166_A296_G0.8690.95
253_T257_G0.8680.95
554_T563_V0.8670.95
285_Q333_A0.8650.95
29_Y99_A0.8650.95
453_A523_A0.8640.95
543_A548_Q0.8630.95
27_A253_T0.8590.95
327_Y362_E0.8580.95
37_G93_V0.8540.95
628_N649_M0.8530.95
576_L580_A0.8530.95
298_S335_S0.8520.95
26_Y262_K0.8520.95
174_Y367_D0.8500.95
204_S233_V0.8490.95
416_W436_V0.8470.95
471_A478_A0.8460.95
476_Q514_A0.8450.95
541_H580_A0.8450.95
405_E408_E0.8420.95
39_A122_W0.8420.95
7_A232_F0.8410.95
632_S641_A0.8390.94
547_H552_N0.8390.94
169_Q287_G0.8380.94
174_Y733_N0.8380.94
316_A336_S0.8360.94
327_Y380_R0.8350.94
611_D625_R0.8350.94
466_N498_R0.8330.94
288_V364_M0.8330.94
670_V673_P0.8310.94
34_I93_V0.8300.94
664_D671_R0.8290.94
171_Q298_S0.8260.94
457_L534_L0.8250.94
407_L438_C0.8250.94
30_V120_I0.8250.94
661_M670_V0.8230.94
31_R273_A0.8220.94
652_G713_I0.8190.94
481_V640_L0.8180.94
44_D47_A0.8180.94
548_Q552_N0.8180.94
42_I100_V0.8160.94
363_S721_R0.8160.94
163_I295_K0.8150.94
438_C607_C0.8150.94
295_K331_A0.8150.94
16_T19_Y0.8110.93
131_P281_T0.8070.93
52_G114_A0.8070.93
112_E266_S0.8060.93
280_F303_S0.8060.93
89_L93_V0.8050.93
47_A53_V0.8040.93
728_T745_E0.8020.93
187_V270_C0.8020.93
675_L680_M0.7990.93
199_I226_V0.7980.93
529_S532_L0.7980.93
48_R60_E0.7970.93
44_D58_T0.7970.93
64_D68_A0.7960.93
265_L270_C0.7930.93
226_V251_F0.7930.93
130_T281_T0.7920.93
428_G431_R0.7920.93
26_Y108_E0.7910.93
45_E49_S0.7900.92
701_S705_H0.7890.92
128_I342_N0.7880.92
626_I689_L0.7880.92
282_I299_L0.7860.92
614_V742_L0.7860.92
465_I534_L0.7860.92
367_D731_A0.7850.92
292_G374_I0.7840.92
547_H562_L0.7840.92
725_K728_T0.7820.92
359_F363_S0.7820.92
575_D578_M0.7810.92
467_V527_L0.7790.92
492_V496_D0.7790.92
457_L530_A0.7770.92
364_M368_A0.7770.92
536_E550_A0.7770.92
208_P505_T0.7760.92
174_Y363_S0.7750.92
725_K731_A0.7740.92
686_L689_L0.7730.92
36_H142_I0.7730.92
227_R505_T0.7720.92
203_S211_V0.7710.92
186_S264_S0.7680.91
573_L577_A0.7680.91
361_V364_M0.7680.91
158_N331_A0.7670.91
61_D256_L0.7660.91
379_I382_R0.7660.91
542_A576_L0.7650.91
212_R505_T0.7640.91
60_E90_T0.7610.91
129_T668_G0.7610.91
443_S602_P0.7600.91
105_A114_A0.7600.91
722_N731_A0.7590.91
156_T332_Y0.7590.91
134_A139_A0.7580.91
538_I560_I0.7570.91
324_A332_Y0.7570.91
486_V489_T0.7570.91
199_I255_K0.7560.91
612_L621_V0.7550.91
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255_K258_G0.6250.80
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519_Q523_A0.6240.80
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542_A545_M0.5530.72
297_Y323_V0.5530.72
193_M226_V0.5520.72
202_V231_P0.5520.72
229_I504_D0.5520.72
591_S595_S0.5520.72
133_A138_D0.5520.72
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279_A343_L0.5510.72
369_A379_I0.5510.72
295_K330_C0.5500.71
39_A59_W0.5490.71
303_S319_G0.5490.71
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127_V342_N0.5480.71
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417_E420_R0.5480.71
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365_L372_L0.5460.71
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482_F485_M0.5450.71
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151_Q155_S0.5400.70
473_E478_A0.5400.70
39_A47_A0.5400.70
168_Y379_I0.5390.70
309_A340_Y0.5380.70
543_A549_S0.5370.70
645_V712_P0.5370.70
658_F680_M0.5360.69
474_I478_A0.5350.69
541_H545_M0.5350.69
716_V720_I0.5340.69
33_P93_V0.5340.69
413_I627_L0.5340.69
547_H553_L0.5330.69
163_I167_D0.5330.69
541_H544_V0.5330.69
204_S236_G0.5320.69
571_M575_D0.5310.69
420_R434_V0.5310.69
115_A119_S0.5310.69
121_E124_E0.5310.69
311_H352_Y0.5300.69
14_R20_V0.5300.69
707_S712_P0.5300.69
553_L562_L0.5300.69
288_V371_A0.5290.68
554_T564_E0.5290.68
292_G379_I0.5290.68
741_R745_E0.5280.68
561_V565_R0.5280.68
619_C743_Y0.5280.68
236_G357_V0.5280.68
352_Y516_A0.5280.68
552_N565_R0.5280.68
211_V247_P0.5280.68
62_V88_L0.5270.68
381_L407_L0.5270.68
490_V538_I0.5260.68
414_F417_E0.5250.68
179_I349_M0.5240.68
214_V243_V0.5240.68
574_K577_A0.5230.68
722_N725_K0.5230.68
479_D501_S0.5220.67
86_R91_R0.5220.67
187_V274_T0.5220.67
534_L592_A0.5210.67
130_T339_C0.5210.67
717_A720_I0.5210.67
241_Q348_A0.5200.67
547_H565_R0.5200.67
544_V576_L0.5190.67
406_C438_C0.5190.67
500_I508_T0.5190.67
556_I559_H0.5190.67
35_A664_D0.5180.67
103_V111_A0.5170.67
303_S316_A0.5170.67
67_F70_A0.5170.67
139_A143_H0.5170.67
455_A469_S0.5160.67
286_M365_L0.5150.66
650_G653_I0.5150.66
61_D64_D0.5150.66
479_D499_V0.5150.66
180_Q183_H0.5140.66
103_V114_A0.5140.66
437_A722_N0.5140.66
189_S247_P0.5140.66
30_V47_A0.5130.66
181_H276_T0.5130.66
608_T628_N0.5130.66
280_F356_Q0.5120.66
453_A522_V0.5120.66
646_H689_L0.5120.66
402_G696_I0.5120.66
185_E240_K0.5120.66
29_Y104_V0.5110.66
457_L497_V0.5100.66
293_T378_E0.5090.66
297_Y332_Y0.5090.66
457_L527_L0.5090.66
318_A322_K0.5090.66
377_V416_W0.5080.65
437_A718_A0.5070.65
471_A514_A0.5060.65
182_C271_F0.5060.65
36_H93_V0.5060.65
385_A398_I0.5060.65
425_N431_R0.5050.65
182_C270_C0.5050.65
154_M157_G0.5040.65
25_C261_V0.5040.65
55_A253_T0.5030.65
157_G331_A0.5030.65
33_P37_G0.5030.65
143_H147_N0.5030.65
611_D624_N0.5020.65
88_L99_A0.5020.65
305_T346_A0.5020.65
48_R256_L0.5020.65
534_L590_L0.5010.64
458_L466_N0.5010.64
189_S201_I0.5010.64
131_P339_C0.5000.64
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
1rm6A 2 0.9694 100 0.102 Contact Map
1t3qB 2 0.9867 100 0.11 Contact Map
1ffvB 2 0.9787 100 0.118 Contact Map
1n62B 2 0.9814 100 0.121 Contact Map
2w3sB 2 0.9668 100 0.124 Contact Map
3uncA 2 0.9548 100 0.134 Contact Map
3nvzC 2 0.9548 100 0.146 Contact Map
3zyvA 3 0.9468 100 0.147 Contact Map
4usaA 2 0.9441 100 0.149 Contact Map
1dgjA 1 0.9402 100 0.153 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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