PUUA - ECOLI - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

PUUA - Gamma-glutamylputrescine synthetase PuuA

UniProt:	P78061	Sequences: METNIVEVENFVQQSEERRGSAFTQEVKRYLERYPNTQYVDVLLTDLNGCFRGKRIPVSSLKKLEKGCYFPASVFAMDILGNVVEEAGLGQEMGEPDRTCVPVLGSLTPSAADPEFIGQMLLTMVDEDGAPFDVEPRNVLNRLWQQLRQRGLFPVVAVELEFYLLDRQRDAEGYLQPPCAPGTDDRNTQSQVYSVDNLNHFADVLNDIDELAQLQLIPADGAVAEASPGQFEINLYHTDNVLEACDDALALKRLVRLMAEKHKMHATFMAKPYEEHAGSGMHIHISMQNNRGENVLSDAEGEDSPLLKKMLAGMIDLMPSSMALLAPNVNSYRRFQPGMYVPTQASWGHNNRTVALRIPCGDRHNHRVEYRVAGADANPYLVMAAIFAGILHGLDNELPLQEEVEGNGLEQEGLPFPIRQSDALGEFIENDHLRRYLGERFCHVYHACKNDELLQFERLITETEIEWMLKNA	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG13908
Length:	472 (422)
Sequences:	6375 (3279)
Seq/√Len:	159.6

ECOLI - PUUA GLNA
BACSU - GLNA
HALSA - GLNA
SULSO - GLNA Q97VQ9 Q97W07

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
428_I	450_N	5.126	1.00
312_A	398_L	4.795	1.00
207_D	262_H	3.962	1.00
285_I	310_M	3.933	1.00
150_R	395_D	3.875	1.00
392_H	396_N	3.785	1.00
310_M	390_I	3.763	1.00
123_T	141_N	3.511	1.00
146_Q	395_D	3.506	1.00
145_Q	149_Q	3.361	1.00
309_K	397_E	3.360	1.00
126_D	130_A	3.045	1.00
316_D	396_N	2.903	1.00
29_R	33_R	2.829	1.00
439_E	443_H	2.805	1.00
143_L	388_A	2.746	1.00
204_V	208_I	2.742	1.00
139_V	441_F	2.695	1.00
320_S	430_N	2.690	1.00
434_R	439_E	2.669	1.00
462_E	466_E	2.610	1.00
320_S	433_L	2.565	1.00
238_T	247_D	2.528	1.00
145_Q	148_R	2.519	1.00
255_V	266_A	2.506	1.00
289_N	293_E	2.486	1.00
295_V	306_L	2.481	1.00
156_V	383_M	2.465	1.00
207_D	261_K	2.440	1.00
305_P	397_E	2.377	1.00
317_L	430_N	2.364	1.00
163_Y	227_S	2.353	1.00
285_I	386_I	2.343	1.00
317_L	392_H	2.274	1.00
238_T	243_E	2.263	1.00
425_G	450_N	2.255	1.00
324_L	385_A	2.245	1.00
419_R	422_D	2.218	1.00
308_K	399_P	2.204	1.00
243_E	247_D	2.199	1.00
309_K	312_A	2.165	1.00
148_R	153_F	2.156	1.00
144_W	242_L	2.127	1.00
421_S	457_E	2.121	1.00
30_Y	35_P	2.052	1.00
325_L	382_V	2.050	1.00
323_A	427_F	2.038	1.00
239_D	243_E	2.012	1.00
59_S	213_Q	1.997	1.00
164_L	204_V	1.988	1.00
144_W	241_V	1.986	1.00
212_A	254_L	1.980	1.00
208_I	255_V	1.954	1.00
418_I	422_D	1.940	1.00
215_Q	254_L	1.912	1.00
42_V	122_L	1.869	1.00
165_L	273_Y	1.867	1.00
427_F	442_C	1.857	1.00
426_E	429_E	1.851	1.00
147_L	154_P	1.830	1.00
38_Q	210_E	1.829	1.00
133_D	440_R	1.829	1.00
218_P	236_Y	1.818	1.00
455_Q	467_W	1.816	1.00
25_Q	29_R	1.785	1.00
377_A	382_V	1.778	1.00
309_K	398_L	1.775	1.00
306_L	394_L	1.770	1.00
312_A	400_L	1.739	1.00
163_Y	279_S	1.690	1.00
305_P	309_K	1.689	1.00
424_L	446_H	1.684	1.00
144_W	239_D	1.675	1.00
245_C	383_M	1.657	1.00
301_G	308_K	1.650	1.00
251_L	255_V	1.646	1.00
211_L	258_M	1.637	1.00
64_L	104_L	1.636	1.00
317_L	389_G	1.628	1.00
421_S	425_G	1.627	1.00
324_L	427_F	1.623	1.00
422_D	425_G	1.599	1.00
141_N	242_L	1.598	1.00
319_P	426_E	1.594	1.00
155_V	237_H	1.594	1.00
106_S	121_L	1.588	1.00
155_V	288_Q	1.581	1.00
147_L	391_L	1.579	1.00
160_L	248_A	1.567	1.00
428_I	446_H	1.560	1.00
139_V	384_A	1.552	1.00
154_P	387_F	1.546	1.00
316_D	398_L	1.541	1.00
101_V	125_V	1.539	1.00
31_L	58_V	1.530	1.00
388_A	436_Y	1.529	1.00
432_H	436_Y	1.529	1.00
211_L	214_L	1.502	1.00
37_T	109_P	1.488	1.00
43_L	119_Q	1.447	1.00
143_L	384_A	1.432	1.00
164_L	259_A	1.420	1.00
212_A	217_I	1.414	1.00
152_L	295_V	1.410	1.00
309_K	399_P	1.381	1.00
143_L	146_Q	1.381	1.00
119_Q	250_A	1.379	1.00
235_L	244_A	1.379	1.00
244_A	247_D	1.375	1.00
323_A	424_L	1.367	1.00
45_T	249_L	1.356	1.00
431_D	435_R	1.344	1.00
26_E	29_R	1.334	1.00
308_K	400_L	1.330	1.00
305_P	399_P	1.326	1.00
31_L	61_L	1.321	1.00
454_L	457_E	1.307	1.00
425_G	429_E	1.306	1.00
370_Y	386_I	1.304	1.00
285_I	390_I	1.288	1.00
141_N	145_Q	1.270	1.00
38_Q	213_Q	1.268	1.00
321_S	325_L	1.266	1.00
238_T	244_A	1.261	1.00
305_P	308_K	1.254	1.00
135_E	138_N	1.252	1.00
166_D	264_M	1.249	1.00
290_N	293_E	1.248	1.00
167_R	260_E	1.248	1.00
425_G	428_I	1.246	1.00
310_M	391_L	1.244	1.00
356_L	368_V	1.238	1.00
29_R	32_E	1.231	1.00
311_L	368_V	1.231	1.00
306_L	309_K	1.229	1.00
27_V	107_L	1.227	1.00
225_E	232_E	1.222	1.00
449_K	452_E	1.218	1.00
126_D	133_D	1.218	1.00
434_R	442_C	1.210	1.00
319_P	322_M	1.209	1.00
320_S	426_E	1.209	1.00
428_I	443_H	1.203	1.00
312_A	401_Q	1.202	1.00
434_R	443_H	1.198	1.00
146_Q	388_A	1.195	1.00
201_F	231_F	1.188	1.00
51_F	121_L	1.186	1.00
321_S	385_A	1.185	1.00
227_S	277_A	1.185	1.00
411_Q	414_L	1.181	1.00
298_D	301_G	1.167	1.00
207_D	211_L	1.167	1.00
37_T	118_G	1.158	1.00
456_F	463_T	1.152	1.00
164_L	266_A	1.152	1.00
147_L	150_R	1.148	1.00
326_A	331_S	1.147	1.00
221_G	234_N	1.146	1.00
322_M	372_V	1.145	1.00
100_C	124_M	1.141	1.00
283_I	386_I	1.141	1.00
258_M	262_H	1.138	1.00
430_N	433_L	1.138	1.00
319_P	422_D	1.132	1.00
317_L	396_N	1.132	1.00
321_S	389_G	1.129	1.00
298_D	302_E	1.118	1.00
107_L	118_G	1.118	1.00
254_L	258_M	1.118	1.00
311_L	356_L	1.116	1.00
28_K	62_K	1.112	1.00
228_P	276_H	1.112	1.00
454_L	458_R	1.104	1.00
318_M	355_A	1.102	1.00
269_M	330_N	1.101	1.00
100_C	122_L	1.101	1.00
310_M	386_I	1.090	0.99
451_D	455_Q	1.081	0.99
289_N	295_V	1.081	0.99
131_P	138_N	1.080	0.99
165_L	267_T	1.069	0.99
163_Y	277_A	1.067	0.99
331_S	374_G	1.065	0.99
103_V	123_T	1.060	0.99
211_L	261_K	1.060	0.99
315_I	356_L	1.046	0.99
332_Y	420_Q	1.041	0.99
446_H	450_N	1.038	0.99
152_L	306_L	1.038	0.99
427_F	433_L	1.026	0.99
140_L	241_V	1.025	0.99
312_A	399_P	1.021	0.99
220_D	236_Y	1.019	0.99
232_E	282_H	1.018	0.99
283_I	382_V	1.017	0.99
274_E	460_I	1.015	0.99
211_L	254_L	1.008	0.99
319_P	345_A	1.008	0.99
226_A	277_A	1.007	0.99
309_K	394_L	1.004	0.99
40_V	61_L	1.001	0.99
259_A	266_A	1.000	0.99
153_F	239_D	0.997	0.99
453_L	457_E	0.997	0.99
443_H	447_A	0.990	0.99
323_A	445_Y	0.990	0.99
354_V	408_G	0.989	0.99
333_R	464_E	0.976	0.99
108_T	119_Q	0.974	0.99
460_I	464_E	0.972	0.99
94_G	407_N	0.968	0.99
427_F	446_H	0.966	0.99
225_E	282_H	0.965	0.99
27_V	120_M	0.964	0.99
430_N	434_R	0.962	0.99
51_F	249_L	0.949	0.99
321_S	433_L	0.946	0.99
215_Q	250_A	0.941	0.98
355_A	372_V	0.939	0.98
296_L	307_L	0.936	0.98
456_F	461_T	0.936	0.98
46_D	52_R	0.932	0.98
248_A	281_M	0.932	0.98
235_L	251_L	0.932	0.98
270_A	376_D	0.930	0.98
204_V	258_M	0.930	0.98
113_D	117_I	0.927	0.98
62_K	65_E	0.924	0.98
324_L	442_C	0.923	0.98
428_I	439_E	0.921	0.98
38_Q	115_E	0.921	0.98
314_M	356_L	0.918	0.98
450_N	454_L	0.914	0.98
270_A	374_G	0.912	0.98
204_V	264_M	0.911	0.98
27_V	104_L	0.907	0.98
424_L	450_N	0.897	0.98
26_E	30_Y	0.896	0.98
35_P	109_P	0.896	0.98
139_V	143_L	0.895	0.98
433_L	437_L	0.895	0.98
24_T	65_E	0.895	0.98
233_I	251_L	0.892	0.98
349_H	403_E	0.892	0.98
24_T	28_K	0.889	0.98
392_H	435_R	0.884	0.98
209_D	222_A	0.883	0.98
428_I	431_D	0.882	0.98
308_K	312_A	0.882	0.98
135_E	139_V	0.881	0.98
424_L	453_L	0.880	0.98
147_L	287_M	0.877	0.98
159_E	232_E	0.875	0.98
40_V	58_V	0.874	0.98
156_V	310_M	0.874	0.98
459_L	463_T	0.873	0.98
204_V	262_H	0.873	0.98
156_V	244_A	0.873	0.98
445_Y	449_K	0.872	0.98
105_G	243_E	0.871	0.97
287_M	295_V	0.870	0.97
134_V	440_R	0.869	0.97
150_R	391_L	0.868	0.97
28_K	32_E	0.863	0.97
159_E	225_E	0.861	0.97
461_T	464_E	0.857	0.97
342_P	371_R	0.857	0.97
200_H	260_E	0.856	0.97
346_S	408_G	0.853	0.97
143_L	436_Y	0.850	0.97
310_M	314_M	0.848	0.97
362_D	365_N	0.847	0.97
433_L	442_C	0.845	0.97
421_S	453_L	0.845	0.97
421_S	450_N	0.842	0.97
285_I	370_Y	0.834	0.97
318_M	356_L	0.831	0.97
92_E	95_E	0.829	0.97
329_V	420_Q	0.829	0.97
328_N	376_D	0.829	0.97
353_T	408_G	0.829	0.97
346_S	354_V	0.828	0.97
158_V	248_A	0.826	0.97
202_A	206_N	0.824	0.97
324_L	437_L	0.823	0.96
314_M	368_V	0.818	0.96
147_L	152_L	0.817	0.96
431_D	439_E	0.816	0.96
351_N	409_L	0.813	0.96
125_V	138_N	0.811	0.96
144_W	154_P	0.808	0.96
442_C	446_H	0.808	0.96
384_A	437_L	0.795	0.96
207_D	258_M	0.793	0.96
338_G	341_V	0.793	0.96
152_L	287_M	0.792	0.96
59_S	218_P	0.790	0.96
125_V	131_P	0.786	0.95
426_E	430_N	0.785	0.95
460_I	463_T	0.783	0.95
353_T	409_L	0.783	0.95
192_V	223_V	0.783	0.95
424_L	449_K	0.783	0.95
359_P	367_R	0.782	0.95
322_M	416_F	0.782	0.95
156_V	245_C	0.780	0.95
388_A	433_L	0.780	0.95
138_N	142_R	0.777	0.95
154_P	285_I	0.777	0.95
265_H	469_L	0.776	0.95
320_S	432_H	0.773	0.95
131_P	141_N	0.772	0.95
143_L	147_L	0.772	0.95
154_P	287_M	0.772	0.95
52_R	194_S	0.768	0.95
325_L	430_N	0.768	0.95
210_E	214_L	0.767	0.95
203_D	262_H	0.765	0.95
162_F	208_I	0.763	0.95
288_Q	295_V	0.760	0.95
39_Y	209_D	0.760	0.95
402_E	405_E	0.757	0.94
455_Q	458_R	0.756	0.94
351_N	407_N	0.756	0.94
217_I	235_L	0.752	0.94
159_E	284_H	0.750	0.94
336_Q	343_T	0.749	0.94
161_E	225_E	0.749	0.94
60_S	63_K	0.748	0.94
286_S	367_R	0.748	0.94
274_E	459_L	0.748	0.94
123_T	135_E	0.743	0.94
133_D	138_N	0.742	0.94
337_P	343_T	0.740	0.94
168_Q	174_Y	0.740	0.94
210_E	213_Q	0.738	0.94
303_D	349_H	0.737	0.94
385_A	437_L	0.736	0.94
451_D	454_L	0.731	0.93
317_L	320_S	0.730	0.93
61_L	120_M	0.724	0.93
153_F	290_N	0.723	0.93
392_H	398_L	0.723	0.93
35_P	107_L	0.721	0.93
269_M	333_R	0.721	0.93
31_L	37_T	0.720	0.93
133_D	438_G	0.719	0.93
283_I	383_M	0.719	0.93
317_L	321_S	0.718	0.93
150_R	295_V	0.716	0.93
317_L	398_L	0.716	0.93
164_L	208_I	0.714	0.92
324_L	445_Y	0.713	0.92
212_A	251_L	0.713	0.92
69_Y	99_T	0.712	0.92
444_V	447_A	0.712	0.92
55_R	113_D	0.711	0.92
205_L	222_A	0.710	0.92
218_P	247_D	0.709	0.92
456_F	467_W	0.709	0.92
217_I	250_A	0.708	0.92
219_A	233_I	0.706	0.92
226_A	340_Y	0.704	0.92
31_L	40_V	0.702	0.92
39_Y	210_E	0.700	0.92
456_F	459_L	0.697	0.92
138_N	141_N	0.697	0.92
54_K	193_Y	0.697	0.92
392_H	432_H	0.695	0.91
139_V	142_R	0.693	0.91
439_E	442_C	0.692	0.91
113_D	203_D	0.688	0.91
329_V	461_T	0.688	0.91
187_N	190_S	0.685	0.91
270_A	331_S	0.685	0.91
209_D	219_A	0.685	0.91
285_I	314_M	0.685	0.91
199_N	257_L	0.683	0.91
48_N	448_C	0.682	0.91
225_E	284_H	0.682	0.91
382_V	385_A	0.681	0.91
329_V	456_F	0.680	0.91
153_F	288_Q	0.680	0.91
327_P	331_S	0.678	0.90
108_T	250_A	0.674	0.90
103_V	141_N	0.674	0.90
406_G	409_L	0.673	0.90
367_R	371_R	0.671	0.90
348_G	354_V	0.668	0.90
114_P	203_D	0.668	0.90
299_A	303_D	0.666	0.90
191_Q	194_S	0.665	0.90
144_W	148_R	0.663	0.89
130_A	133_D	0.661	0.89
154_P	241_V	0.660	0.89
161_E	282_H	0.659	0.89
43_L	51_F	0.659	0.89
437_L	442_C	0.659	0.89
465_I	469_L	0.655	0.89
322_M	326_A	0.654	0.89
352_R	371_R	0.653	0.89
191_Q	197_N	0.653	0.89
314_M	370_Y	0.653	0.89
103_V	106_S	0.650	0.89
373_A	382_V	0.649	0.88
110_S	119_Q	0.649	0.88
270_A	328_N	0.649	0.88
47_L	441_F	0.648	0.88
25_Q	28_K	0.647	0.88
287_M	387_F	0.645	0.88
156_V	285_I	0.645	0.88
309_K	400_L	0.644	0.88
156_V	241_V	0.643	0.88
333_R	456_F	0.643	0.88
157_A	234_N	0.642	0.88
161_E	232_E	0.642	0.88
160_L	235_L	0.642	0.88
395_D	398_L	0.642	0.88
248_A	383_M	0.642	0.88
41_D	53_G	0.638	0.88
304_S	307_L	0.637	0.88
320_S	431_D	0.637	0.88
147_L	387_F	0.637	0.88
56_I	68_C	0.637	0.88
303_D	308_K	0.636	0.87
320_S	427_F	0.636	0.87
314_M	386_I	0.634	0.87
44_L	100_C	0.633	0.87
71_P	340_Y	0.632	0.87
342_P	353_T	0.632	0.87
159_E	282_H	0.630	0.87
347_W	358_I	0.628	0.87
119_Q	215_Q	0.627	0.87
327_P	377_A	0.626	0.87
391_L	395_D	0.625	0.87
160_L	251_L	0.624	0.86
126_D	132_F	0.623	0.86
153_F	289_N	0.622	0.86
341_V	409_L	0.621	0.86
373_A	377_A	0.621	0.86
208_I	233_I	0.620	0.86
201_F	264_M	0.619	0.86
345_A	355_A	0.615	0.86
324_L	381_L	0.615	0.86
316_D	320_S	0.614	0.86
112_A	254_L	0.613	0.85
427_F	430_N	0.613	0.85
273_Y	276_H	0.613	0.85
252_K	256_R	0.612	0.85
223_V	226_A	0.611	0.85
287_M	306_L	0.610	0.85
322_M	417_P	0.610	0.85
245_C	379_P	0.610	0.85
441_F	445_Y	0.610	0.85
140_L	384_A	0.609	0.85
463_T	467_W	0.608	0.85
164_L	201_F	0.607	0.85
142_R	145_Q	0.606	0.85
351_N	404_V	0.605	0.85
271_K	278_G	0.604	0.85
296_L	387_F	0.604	0.85
329_V	464_E	0.604	0.85
438_G	441_F	0.604	0.85
289_N	292_G	0.602	0.84
278_G	334_R	0.601	0.84
313_G	394_L	0.600	0.84
239_D	242_L	0.599	0.84
157_A	223_V	0.599	0.84
299_A	302_E	0.597	0.84
390_I	393_G	0.596	0.84
50_C	256_R	0.596	0.84
220_D	237_H	0.596	0.84
104_L	120_M	0.595	0.84
284_H	367_R	0.593	0.84
232_E	369_E	0.593	0.84
399_P	402_E	0.592	0.83
237_H	286_S	0.592	0.83
114_P	117_I	0.586	0.83
460_I	465_I	0.585	0.83
435_R	439_E	0.585	0.83
403_E	406_G	0.585	0.83
148_R	290_N	0.584	0.83
441_F	444_V	0.584	0.83
208_I	254_L	0.583	0.83
404_V	408_G	0.582	0.82
61_L	104_L	0.582	0.82
298_D	303_D	0.581	0.82
307_L	311_L	0.579	0.82
70_F	100_C	0.579	0.82
322_M	345_A	0.578	0.82
163_Y	276_H	0.577	0.82
253_R	257_L	0.576	0.82
455_Q	463_T	0.576	0.82
257_L	260_E	0.575	0.82
318_M	372_V	0.573	0.81
237_H	241_V	0.572	0.81
336_Q	339_M	0.572	0.81
117_I	206_N	0.572	0.81
41_D	253_R	0.571	0.81
387_F	391_L	0.570	0.81
30_Y	109_P	0.570	0.81
121_L	250_A	0.570	0.81
429_E	432_H	0.570	0.81
38_Q	214_L	0.569	0.81
289_N	306_L	0.569	0.81
427_F	437_L	0.569	0.81
425_G	446_H	0.568	0.81
30_Y	107_L	0.568	0.81
164_L	264_M	0.568	0.81
219_A	222_A	0.567	0.81
102_P	120_M	0.567	0.81
289_N	294_N	0.567	0.81
456_F	464_E	0.567	0.81
142_R	146_Q	0.566	0.81
279_S	375_A	0.565	0.81
60_S	218_P	0.565	0.81
42_V	68_C	0.564	0.80
168_Q	173_G	0.564	0.80
93_M	340_Y	0.562	0.80
115_E	210_E	0.562	0.80
220_D	234_N	0.562	0.80
163_Y	271_K	0.562	0.80
330_N	464_E	0.562	0.80
325_L	370_Y	0.560	0.80
25_Q	32_E	0.560	0.80
159_E	369_E	0.559	0.80
217_I	247_D	0.559	0.80
167_R	265_H	0.558	0.80
303_D	403_E	0.557	0.80
352_R	369_E	0.555	0.79
300_E	303_D	0.555	0.79
308_K	347_W	0.555	0.79
212_A	219_A	0.554	0.79
430_N	439_E	0.554	0.79
30_Y	36_N	0.553	0.79
420_Q	424_L	0.553	0.79
298_D	308_K	0.553	0.79
48_N	445_Y	0.552	0.79
39_Y	55_R	0.552	0.79
274_E	458_R	0.552	0.79
155_V	286_S	0.552	0.79
93_M	96_P	0.551	0.79
220_D	286_S	0.551	0.79
448_C	451_D	0.551	0.79
44_L	124_M	0.551	0.79
217_I	251_L	0.550	0.79
408_G	415_P	0.550	0.79
333_R	461_T	0.548	0.79
419_R	457_E	0.548	0.79
159_E	352_R	0.548	0.79
339_M	458_R	0.548	0.79
217_I	248_A	0.545	0.78
226_A	339_M	0.545	0.78
410_E	414_L	0.545	0.78
321_S	324_L	0.544	0.78
322_M	423_A	0.544	0.78
206_N	210_E	0.543	0.78
284_H	352_R	0.543	0.78
44_L	75_F	0.543	0.78
155_V	239_D	0.543	0.78
389_G	393_G	0.542	0.78
24_T	104_L	0.541	0.78
349_H	405_E	0.541	0.78
230_Q	279_S	0.540	0.78
73_S	340_Y	0.536	0.77
150_R	397_E	0.536	0.77
146_Q	150_R	0.535	0.77
192_V	226_A	0.535	0.77
431_D	434_R	0.534	0.77
142_R	438_G	0.534	0.77
71_P	74_V	0.534	0.77
162_F	233_I	0.534	0.77
158_V	281_M	0.533	0.77
225_E	280_G	0.533	0.77
329_V	453_L	0.533	0.77
182_G	260_E	0.532	0.76
60_S	236_Y	0.531	0.76
60_S	220_D	0.530	0.76
41_D	55_R	0.530	0.76
325_L	389_G	0.529	0.76
275_E	458_R	0.529	0.76
346_S	414_L	0.529	0.76
293_E	364_H	0.528	0.76
157_A	237_H	0.527	0.76
43_L	250_A	0.527	0.76
91_Q	132_F	0.526	0.76
33_R	36_N	0.525	0.76
269_M	464_E	0.525	0.76
195_V	253_R	0.524	0.75
419_R	453_L	0.524	0.75
258_M	261_K	0.523	0.75
431_D	443_H	0.522	0.75
421_S	428_I	0.522	0.75
186_R	190_S	0.521	0.75
455_Q	459_L	0.521	0.75
435_R	438_G	0.520	0.75
53_G	195_V	0.520	0.75
47_L	448_C	0.517	0.74
64_L	120_M	0.516	0.74
157_A	272_P	0.516	0.74
165_L	272_P	0.516	0.74
327_P	381_L	0.515	0.74
205_L	231_F	0.514	0.74
45_T	51_F	0.514	0.74
329_V	463_T	0.514	0.74
349_H	358_I	0.513	0.74
56_I	61_L	0.513	0.74
166_D	184_D	0.512	0.74
234_N	367_R	0.512	0.74
29_R	35_P	0.512	0.74
94_G	350_N	0.512	0.74
287_M	390_I	0.511	0.74
111_A	211_L	0.510	0.73
325_L	385_A	0.510	0.73
194_S	197_N	0.509	0.73
111_A	215_Q	0.509	0.73
39_Y	206_N	0.508	0.73
39_Y	113_D	0.508	0.73
282_H	369_E	0.508	0.73
318_M	321_S	0.508	0.73
396_N	399_P	0.505	0.73
47_L	381_L	0.505	0.73
38_Q	58_V	0.505	0.73
232_E	280_G	0.504	0.73
320_S	323_A	0.504	0.73
157_A	286_S	0.503	0.72
318_M	345_A	0.503	0.72
293_E	306_L	0.503	0.72
158_V	383_M	0.502	0.72
336_Q	458_R	0.501	0.72
456_F	460_I	0.501	0.72
107_L	120_M	0.500	0.72

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4lniA	5	0.9089	100	0.148	Contact Map
4s17A	5	0.8898	100	0.157	Contact Map
4acfA	5	0.9216	100	0.158	Contact Map
3ng0A	5	0.9131	100	0.166	Contact Map
1f52A	5	0.9195	100	0.166	Contact Map
4hppA	3	0.8686	100	0.17	Contact Map
2j9iA	5	0.8708	100	0.208	Contact Map
3o6xA	3	0.8326	100	0.358	Contact Map
3fkyA	8	0.6886	100	0.373	Contact Map
4baxA	5	0.6992	100	0.38	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0124 seconds.