GREMLIN Database
YAGF - Uncharacterized protein YagF
UniProt: P77596 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG13345
Length: 655 (547)
Sequences: 4805 (1913)
Seq/√Len: 81.8

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
470_T568_E4.5641.00
560_K589_P4.3201.00
291_L296_I3.9711.00
294_K379_H3.7081.00
470_T579_S3.5861.00
446_P557_P3.5361.00
568_E579_S3.5191.00
297_E379_H3.4411.00
560_K585_T3.4331.00
493_Q527_T3.3271.00
470_T566_I3.2851.00
286_T289_D3.2151.00
570_A573_R3.2021.00
562_R591_T3.1581.00
155_A281_D3.0571.00
380_L391_G2.9841.00
214_S217_E2.8911.00
561_L578_G2.8891.00
373_R380_L2.8431.00
566_I579_S2.7461.00
178_D288_R2.7311.00
76_G155_A2.6961.00
178_D289_D2.6891.00
447_E615_P2.6491.00
423_L427_K2.6361.00
474_R495_D2.6281.00
207_R212_E2.5911.00
568_E577_T2.5631.00
474_R563_D2.4811.00
472_R566_I2.4701.00
562_R584_G2.4521.00
291_L295_A2.4181.00
331_E441_T2.4021.00
505_S554_A2.3981.00
386_T393_N2.3911.00
581_N584_G2.3751.00
184_V273_S2.3601.00
251_L291_L2.3531.00
276_A279_E2.3521.00
478_S481_Q2.3241.00
302_I369_M2.3061.00
182_I277_V2.2991.00
443_N577_T2.2931.00
170_M251_L2.2781.00
301_V339_K2.2781.00
202_Q539_V2.2721.00
334_T338_R2.2061.00
531_I548_V2.1951.00
468_H570_A2.1931.00
584_G587_D2.1771.00
294_K381_D2.1741.00
175_A291_L2.1701.00
62_K223_C2.1641.00
300_M333_W2.1401.00
449_S576_L2.1401.00
170_M319_I2.1241.00
62_K68_G2.1171.00
301_V340_V2.1141.00
477_V500_I2.0751.00
388_Q392_E2.0751.00
582_F586_A2.0651.00
304_A336_I2.0581.00
580_V585_T2.0561.00
382_A390_V1.9891.00
190_L262_G1.9461.00
293_D297_E1.9361.00
329_D332_H1.9221.00
76_G281_D1.9221.00
208_F213_L1.9031.00
587_D590_L1.8941.00
276_A283_R1.8881.00
444_I561_L1.8861.00
272_Q275_R1.8861.00
108_G278_S1.8691.00
208_F215_L1.8531.00
158_G181_T1.8471.00
596_A600_A1.8461.00
467_Y572_D1.8351.00
246_A252_A1.8341.00
578_G585_T1.8241.00
587_D591_T1.8241.00
182_I276_A1.8171.00
334_T574_L1.8171.00
477_V481_Q1.7991.00
369_M390_V1.7901.00
561_L567_I1.7781.00
297_E335_R1.7661.00
438_C574_L1.7611.00
389_T392_E1.7581.00
265_V360_F1.7541.00
155_A277_V1.7531.00
369_M394_L1.7111.00
592_P595_G1.7051.00
561_L580_V1.6841.00
252_A256_S1.6801.00
585_T589_P1.6691.00
468_H572_D1.6561.00
279_E282_S1.6561.00
105_R275_R1.6561.00
605_H609_H1.6531.00
173_L181_T1.6451.00
301_V336_I1.6321.00
484_K488_R1.6311.00
103_I108_G1.6291.00
300_M327_I1.6161.00
94_M267_L1.6111.00
182_I385_V1.6061.00
586_A590_L1.5911.00
241_T308_G1.5891.00
213_L217_E1.5891.00
468_H568_E1.5731.00
279_E283_R1.5661.00
557_P585_T1.5210.99
104_T110_P1.5210.99
248_A302_I1.5180.99
477_V501_G1.5170.99
469_H472_R1.5170.99
78_G103_I1.5150.99
549_S615_P1.5060.99
475_V561_L1.5030.99
338_R434_T1.4980.99
476_F485_A1.4870.99
280_L285_I1.4830.99
586_A589_P1.4790.99
472_R495_D1.4780.99
335_R339_K1.4780.99
485_A491_I1.4720.99
476_F490_E1.4690.99
332_H335_R1.4660.99
175_A323_A1.4620.99
191_P356_T1.4590.99
298_N382_A1.4580.99
86_H117_D1.4550.99
147_I156_V1.4470.99
46_M50_A1.4450.99
293_D332_H1.4430.99
80_P111_F1.4330.99
80_P112_A1.4300.99
256_S269_I1.4280.99
98_A271_R1.4240.99
580_V584_G1.4030.99
171_I322_A1.3980.99
97_Q101_K1.3940.99
99_A157_I1.3910.99
194_V217_E1.3910.99
199_G221_L1.3790.99
172_A287_T1.3760.99
96_M159_V1.3700.99
489_E522_I1.3700.99
473_V567_I1.3640.99
559_G592_P1.3600.99
294_K297_E1.3510.99
359_A368_V1.3440.99
101_K104_T1.3420.99
68_G219_A1.3390.99
321_H616_D1.3380.99
92_I161_T1.3360.99
577_T582_F1.3360.99
251_L287_T1.3280.99
388_Q393_N1.3260.98
313_L317_P1.3120.98
70_Q73_I1.3110.98
102_E274_A1.3050.98
352_D420_D1.3020.98
473_V561_L1.3010.98
98_A267_L1.2980.98
345_S351_P1.2960.98
76_G103_I1.2940.98
103_I274_A1.2910.98
79_R147_I1.2890.98
241_T312_L1.2880.98
291_L323_A1.2840.98
84_G100_A1.2790.98
481_Q484_K1.2770.98
493_Q524_W1.2750.98
394_L397_W1.2710.98
316_I327_I1.2630.98
290_I295_A1.2600.98
375_L425_P1.2560.98
118_P149_S1.2560.98
258_L354_H1.2420.98
331_E335_R1.2380.98
296_I319_I1.2340.98
93_G97_Q1.2290.98
170_M246_A1.2230.97
475_V563_D1.2230.97
293_D335_R1.2210.97
419_D427_K1.2210.97
371_H374_D1.2190.97
79_R156_V1.2120.97
220_E224_R1.2010.97
498_V567_I1.1950.97
443_N582_F1.1920.97
248_A369_M1.1910.97
371_H419_D1.1900.97
560_K580_V1.1880.97
66_I111_F1.1840.97
378_L390_V1.1820.97
447_E549_S1.1820.97
326_T616_D1.1790.97
474_R492_V1.1760.97
157_I274_A1.1740.97
498_V561_L1.1740.97
178_D286_T1.1710.97
451_I569_I1.1660.97
172_A177_H1.1630.97
520_K525_G1.1630.97
85_Y153_R1.1630.97
558_I561_L1.1620.97
157_I277_V1.1610.96
597_R600_A1.1590.96
468_H573_R1.1580.96
480_A484_K1.1570.96
102_E105_R1.1570.96
200_K353_Y1.1550.96
549_S613_F1.1500.96
585_T588_N1.1500.96
497_M519_L1.1450.96
105_R271_R1.1440.96
373_R378_L1.1360.96
61_G64_V1.1350.96
98_A101_K1.1300.96
424_P427_K1.1220.96
158_G183_L1.1090.95
75_A111_F1.1070.95
185_P256_S1.1060.95
46_M49_N1.1050.95
116_S142_V1.1040.95
82_A93_G1.1030.95
480_A510_E1.0980.95
457_D526_K1.0960.95
48_Q61_G1.0940.95
66_I109_I1.0940.95
195_G217_E1.0910.95
373_R391_G1.0890.95
389_T393_N1.0880.95
293_D326_T1.0870.95
68_G223_C1.0870.95
342_R430_A1.0840.95
439_F450_V1.0830.95
612_D616_D1.0820.95
258_L360_F1.0790.95
560_K592_P1.0750.95
143_F172_A1.0730.95
474_R485_A1.0690.94
219_A223_C1.0660.94
77_D156_V1.0620.94
529_S569_I1.0580.94
297_E332_H1.0570.94
472_R492_V1.0540.94
130_F510_E1.0530.94
77_D147_I1.0510.94
289_D383_M1.0450.94
160_A166_L1.0390.94
495_D563_D1.0380.94
447_E616_D1.0370.93
280_L283_R1.0360.93
375_L426_E1.0350.93
101_K271_R1.0340.93
198_A356_T1.0310.93
399_A419_D1.0230.93
373_R394_L1.0220.93
443_N578_G1.0200.93
259_A263_Q1.0180.93
356_T361_L1.0180.93
474_R491_I1.0160.93
254_P393_N1.0140.93
199_G203_T1.0130.93
94_M97_Q1.0110.93
392_E395_E1.0100.93
447_E613_F1.0100.93
370_L397_W1.0070.92
613_F616_D1.0040.92
557_P578_G0.9930.92
491_I497_M0.9900.92
249_L296_I0.9890.92
492_V495_D0.9890.92
276_A280_L0.9850.92
502_G510_E0.9810.91
370_L396_W0.9760.91
190_L228_S0.9760.91
190_L263_Q0.9730.91
459_S526_K0.9720.91
314_L317_P0.9720.91
199_G202_Q0.9720.91
444_I557_P0.9700.91
55_D204_I0.9690.91
81_I169_T0.9610.91
158_G173_L0.9600.91
374_D425_P0.9550.90
303_H312_L0.9510.90
285_I383_M0.9440.90
580_V589_P0.9440.90
516_T536_F0.9420.90
597_R605_H0.9420.90
390_V393_N0.9410.90
370_L373_R0.9400.90
438_C572_D0.9390.90
477_V562_R0.9360.89
293_D325_C0.9350.89
343_L425_P0.9270.89
228_S264_A0.9220.89
249_L299_A0.9220.89
492_V524_W0.9160.88
306_F368_V0.9160.88
498_V578_G0.9160.88
172_A175_A0.9140.88
493_Q526_K0.9120.88
557_P589_P0.9080.88
595_G598_E0.9070.88
126_T151_P0.9070.88
71_G109_I0.9060.88
141_I606_P0.9050.88
139_A168_A0.9030.88
182_I273_S0.9030.88
374_D399_A0.9020.88
259_A269_I0.9010.88
194_V221_L0.8950.87
175_A251_L0.8940.87
90_W229_P0.8930.87
253_L276_A0.8920.87
603_Q620_L0.8910.87
496_I567_I0.8890.87
373_R395_E0.8890.87
419_D424_P0.8870.87
101_K105_R0.8840.87
607_D611_H0.8830.86
91_E186_G0.8820.86
268_E272_Q0.8810.86
131_D148_R0.8810.86
545_F569_I0.8770.86
201_V205_G0.8740.86
108_G274_A0.8710.86
75_A109_I0.8710.86
589_P592_P0.8670.85
264_A268_E0.8650.85
440_P449_S0.8620.85
451_I571_V0.8590.85
555_G592_P0.8590.85
338_R574_L0.8570.85
351_P420_D0.8570.85
276_A285_I0.8550.85
63_E87_T0.8510.84
190_L260_P0.8460.84
290_I383_M0.8440.84
474_R490_E0.8420.84
340_V377_L0.8420.84
391_G395_E0.8410.84
520_K544_C0.8410.84
138_D603_Q0.8390.84
96_M112_A0.8390.84
252_A273_S0.8390.84
614_L617_D0.8360.83
251_L290_I0.8360.83
470_T577_T0.8350.83
284_G287_T0.8340.83
204_I221_L0.8330.83
102_E271_R0.8300.83
92_I186_G0.8300.83
48_Q152_T0.8300.83
578_G581_N0.8290.83
371_H426_E0.8250.83
362_A419_D0.8200.82
302_I365_V0.8200.82
186_G232_G0.8180.82
288_R324_G0.8170.82
601_R605_H0.8160.82
499_V502_G0.8150.82
58_K222_G0.8150.82
127_H599_L0.8140.82
295_A383_M0.8130.82
285_I289_D0.8120.82
79_R143_F0.8120.82
100_A112_A0.8100.81
160_A183_L0.8090.81
383_M388_Q0.8090.81
438_C453_A0.8090.81
193_T198_A0.8080.81
73_I109_I0.8080.81
62_K71_G0.8060.81
265_V268_E0.8040.81
118_P145_R0.8030.81
491_I563_D0.8000.81
181_T287_T0.7970.80
44_F148_R0.7960.80
274_A277_V0.7950.80
143_F169_T0.7930.80
195_G220_E0.7920.80
336_I339_K0.7910.80
345_S423_L0.7910.80
157_I184_V0.7900.80
339_K377_L0.7900.80
460_V469_H0.7880.80
568_E575_T0.7880.80
103_I157_I0.7880.80
383_M393_N0.7880.80
280_L385_V0.7860.79
548_V558_I0.7860.79
52_M208_F0.7850.79
431_K434_T0.7850.79
345_S352_D0.7820.79
215_L219_A0.7800.79
506_G510_E0.7790.79
606_P610_A0.7790.79
477_V595_G0.7780.79
469_H496_I0.7770.79
583_I587_D0.7770.79
245_V303_H0.7760.79
73_I105_R0.7760.79
326_T329_D0.7740.78
106_N274_A0.7740.78
296_I325_C0.7730.78
486_I515_L0.7730.78
334_T438_C0.7700.78
582_F585_T0.7690.78
391_G394_L0.7670.78
321_H326_T0.7640.77
207_R217_E0.7610.77
80_P92_I0.7590.77
580_V586_A0.7570.77
255_H360_F0.7550.77
359_A422_I0.7540.77
383_M386_T0.7540.77
301_V377_L0.7530.76
175_A296_I0.7520.76
390_V394_L0.7510.76
294_K382_A0.7480.76
380_L394_L0.7450.76
313_L450_V0.7440.76
498_V548_V0.7430.75
118_P132_S0.7420.75
197_D351_P0.7410.75
78_G100_A0.7390.75
77_D153_R0.7370.75
370_L374_D0.7370.75
285_I393_N0.7360.75
195_G198_A0.7350.75
545_F548_V0.7350.75
119_C123_S0.7340.75
580_V588_N0.7320.74
244_V306_F0.7310.74
477_V563_D0.7310.74
369_M378_L0.7300.74
444_I500_I0.7290.74
78_G99_A0.7280.74
117_D165_G0.7280.74
292_S295_A0.7280.74
584_G588_N0.7270.74
62_K65_L0.7260.74
379_H382_A0.7260.74
444_I577_T0.7260.74
81_I160_A0.7260.74
78_G156_V0.7260.74
145_R603_Q0.7260.74
170_M291_L0.7250.74
54_W57_N0.7250.74
531_I561_L0.7230.73
156_V181_T0.7230.73
612_D619_R0.7200.73
175_A295_A0.7190.73
244_V257_A0.7180.73
81_I115_V0.7180.73
160_A169_T0.7160.73
457_D460_V0.7150.73
185_P266_W0.7130.72
50_A72_G0.7130.72
236_L306_F0.7120.72
267_L271_R0.7100.72
483_I514_Q0.7090.72
203_T206_A0.7070.72
540_S544_C0.7070.72
185_P243_Q0.7070.72
481_Q485_A0.7060.72
138_D145_R0.7050.72
491_I495_D0.7040.71
280_L290_I0.7010.71
501_G559_G0.7010.71
207_R213_L0.7000.71
300_M316_I0.6980.71
313_L333_W0.6980.71
600_A605_H0.6970.71
381_D391_G0.6970.71
350_G354_H0.6970.71
251_L292_S0.6960.71
48_Q126_T0.6930.70
441_T447_E0.6930.70
208_F214_S0.6930.70
99_A159_V0.6930.70
47_T152_T0.6930.70
61_G65_L0.6910.70
582_F588_N0.6910.70
194_V220_E0.6900.70
124_Q235_F0.6890.70
330_V615_P0.6890.70
296_I327_I0.6890.70
471_G496_I0.6830.69
581_N587_D0.6820.69
55_D218_A0.6780.69
200_K203_T0.6770.68
273_S277_V0.6770.68
496_I529_S0.6750.68
88_G119_C0.6750.68
490_E495_D0.6740.68
53_G152_T0.6740.68
509_M614_L0.6740.68
189_T226_C0.6730.68
295_A325_C0.6710.68
606_P620_L0.6700.68
197_D217_E0.6690.68
270_A273_S0.6680.67
366_P393_N0.6680.67
106_N278_S0.6670.67
382_A391_G0.6640.67
115_V142_V0.6640.67
305_A343_L0.6640.67
102_E275_R0.6640.67
102_E106_N0.6630.67
570_A575_T0.6630.67
67_I71_G0.6620.67
79_R113_A0.6620.67
300_M336_I0.6610.67
92_I96_M0.6600.67
251_L295_A0.6590.66
93_G112_A0.6590.66
297_E381_D0.6580.66
472_R496_I0.6570.66
490_E563_D0.6570.66
259_A360_F0.6570.66
377_L425_P0.6570.66
371_H425_P0.6550.66
350_G353_Y0.6550.66
76_G277_V0.6540.66
295_A323_A0.6540.66
301_V372_L0.6540.66
376_G380_L0.6540.66
86_H146_L0.6520.66
483_I518_A0.6520.66
334_T337_N0.6510.65
83_L146_L0.6500.65
182_I280_L0.6490.65
367_E422_I0.6480.65
598_E602_R0.6480.65
456_I571_V0.6470.65
338_R438_C0.6470.65
103_I277_V0.6470.65
482_A497_M0.6470.65
178_D287_T0.6460.65
344_V368_V0.6430.65
193_T196_E0.6430.65
194_V213_L0.6430.65
49_N75_A0.6430.65
98_A102_E0.6420.64
288_R601_R0.6420.64
268_E271_R0.6410.64
472_R568_E0.6410.64
476_F491_I0.6400.64
248_A365_V0.6400.64
61_G66_I0.6380.64
62_K222_G0.6380.64
487_K539_V0.6370.64
320_A325_C0.6360.64
571_V574_L0.6350.64
271_R275_R0.6320.63
246_A319_I0.6320.63
349_N455_A0.6310.63
176_M322_A0.6310.63
81_I117_D0.6300.63
161_T186_G0.6290.63
77_D113_A0.6280.63
89_H189_T0.6280.63
457_D467_Y0.6260.62
229_P262_G0.6260.62
245_V316_I0.6260.62
370_L394_L0.6260.62
248_A378_L0.6240.62
288_R323_A0.6240.62
276_A385_V0.6230.62
93_G100_A0.6230.62
290_I384_T0.6220.62
291_L327_I0.6220.62
206_A541_T0.6210.62
590_L593_E0.6180.61
434_T467_Y0.6180.61
245_V249_L0.6180.61
246_A251_L0.6170.61
553_L611_H0.6170.61
475_V578_G0.6160.61
134_P603_Q0.6160.61
138_D142_V0.6150.61
572_D575_T0.6150.61
324_G601_R0.6150.61
346_V359_A0.6140.61
300_M329_D0.6130.61
208_F218_A0.6130.61
349_N454_T0.6110.61
438_C451_I0.6100.60
64_V109_I0.6090.60
374_D426_E0.6090.60
580_V587_D0.6080.60
485_A563_D0.6070.60
334_T434_T0.6070.60
209_A487_K0.6060.60
83_L117_D0.6060.60
200_K204_I0.6060.60
228_S262_G0.6050.60
420_D423_L0.6040.60
104_T109_I0.6030.60
74_R108_G0.6030.60
78_G96_M0.6030.60
260_P360_F0.6030.60
602_R605_H0.6020.59
200_K205_G0.6020.59
567_I578_G0.6020.59
115_V169_T0.6020.59
191_P234_Q0.6010.59
278_S281_D0.6010.59
342_R429_K0.6010.59
382_A389_T0.6010.59
370_L398_Q0.5990.59
70_Q275_R0.5990.59
553_L594_E0.5990.59
255_H366_P0.5990.59
327_I333_W0.5980.59
386_T389_T0.5970.59
306_F359_A0.5960.59
399_A418_P0.5960.59
142_V146_L0.5960.59
444_I578_G0.5950.59
84_G112_A0.5950.59
342_R454_T0.5940.58
179_L287_T0.5940.58
334_T441_T0.5940.58
44_F152_T0.5930.58
343_L371_H0.5920.58
292_S325_C0.5910.58
97_Q100_A0.5900.58
207_R210_N0.5890.58
205_G235_F0.5890.58
581_N585_T0.5870.58
484_K490_E0.5870.58
292_S382_A0.5870.58
301_V379_H0.5850.57
204_I218_A0.5840.57
304_A435_S0.5830.57
597_R602_R0.5830.57
67_I70_Q0.5830.57
554_A592_P0.5820.57
469_H543_A0.5820.57
66_I71_G0.5810.57
342_R435_S0.5800.57
248_A382_A0.5800.57
386_T392_E0.5800.57
57_N125_G0.5790.57
577_T580_V0.5790.57
555_G560_K0.5790.57
472_R578_G0.5780.56
95_Q98_A0.5780.56
51_G54_W0.5780.56
304_A337_N0.5770.56
78_G112_A0.5760.56
380_L395_E0.5760.56
193_T361_L0.5750.56
80_P237_G0.5730.56
59_L204_I0.5730.56
481_Q490_E0.5720.56
88_G165_G0.5720.56
62_K219_A0.5720.56
589_P593_E0.5700.55
244_V354_H0.5690.55
143_F158_G0.5690.55
583_I586_A0.5690.55
388_Q396_W0.5690.55
473_V496_I0.5660.55
330_V448_G0.5660.55
216_Q220_E0.5660.55
243_Q257_A0.5650.55
125_G514_Q0.5630.54
234_Q347_L0.5630.54
362_A422_I0.5620.54
554_A613_F0.5620.54
266_W269_I0.5620.54
499_V540_S0.5620.54
313_L439_F0.5610.54
451_I456_I0.5600.54
269_I273_S0.5590.54
156_V177_H0.5590.54
384_T393_N0.5590.54
272_Q276_A0.5580.54
148_R152_T0.5580.54
469_H529_S0.5570.54
371_H424_P0.5570.54
444_I558_I0.5560.54
103_I278_S0.5560.54
204_I225_A0.5550.53
56_A205_G0.5540.53
278_S282_S0.5520.53
438_C571_V0.5510.53
85_Y146_L0.5500.53
310_T547_H0.5500.53
457_D543_A0.5490.53
472_R579_S0.5490.53
502_G506_G0.5480.52
486_I518_A0.5480.52
343_L368_V0.5470.52
420_D427_K0.5470.52
343_L423_L0.5460.52
283_R289_D0.5460.52
79_R117_D0.5450.52
519_L523_S0.5450.52
607_D617_D0.5440.52
53_G209_A0.5430.52
202_Q347_L0.5430.52
307_G454_T0.5420.52
95_Q159_V0.5420.52
45_G48_Q0.5400.51
372_L378_L0.5390.51
586_A591_T0.5380.51
245_V257_A0.5380.51
185_P252_A0.5380.51
82_A96_M0.5380.51
451_I545_F0.5370.51
228_S263_Q0.5360.51
352_D421_V0.5360.51
552_A558_I0.5360.51
293_D379_H0.5350.51
62_K268_E0.5350.51
203_T347_L0.5340.51
69_T272_Q0.5340.51
472_R563_D0.5340.51
183_L256_S0.5340.51
400_S418_P0.5340.51
263_Q360_F0.5340.51
456_I460_V0.5340.51
345_S429_K0.5330.51
175_A288_R0.5330.51
277_V281_D0.5330.51
217_E220_E0.5320.50
482_A516_T0.5320.50
374_D391_G0.5320.50
327_I331_E0.5310.50
213_L221_L0.5310.50
193_T197_D0.5300.50
191_P358_R0.5300.50
172_A179_L0.5300.50
485_A490_E0.5300.50
554_A615_P0.5300.50
196_E206_A0.5290.50
123_S126_T0.5280.50
60_T63_E0.5280.50
194_V199_G0.5280.50
173_L183_L0.5280.50
114_F159_V0.5280.50
474_R493_Q0.5280.50
181_T251_L0.5280.50
193_T221_L0.5280.50
61_G71_G0.5270.50
99_A277_V0.5270.50
566_I578_G0.5270.50
291_L382_A0.5270.50
483_I487_K0.5260.50
329_D335_R0.5260.50
443_N557_P0.5240.49
560_K593_E0.5240.49
291_L319_I0.5240.49
123_S132_S0.5230.49
243_Q266_W0.5220.49
202_Q205_G0.5220.49
272_Q279_E0.5210.49
124_Q237_G0.5210.49
89_H119_C0.5210.49
124_Q513_Y0.5210.49
127_H148_R0.5200.49
141_I536_F0.5200.49
175_A287_T0.5200.49
172_A181_T0.5190.49
256_S266_W0.5180.49
79_R114_F0.5180.49
345_S420_D0.5180.49
434_T453_A0.5180.49
458_P467_Y0.5180.49
83_L114_F0.5170.48
539_V544_C0.5170.48
555_G589_P0.5170.48
91_E261_S0.5160.48
116_S146_L0.5160.48
280_L289_D0.5160.48
303_H308_G0.5160.48
235_F513_Y0.5160.48
559_G590_L0.5150.48
343_L372_L0.5150.48
456_I543_A0.5140.48
74_R278_S0.5140.48
460_V467_Y0.5140.48
279_E285_I0.5130.48
437_V467_Y0.5130.48
447_E554_A0.5120.48
77_D111_F0.5120.48
177_H510_E0.5120.48
520_K541_T0.5100.48
95_Q102_E0.5100.48
534_A618_T0.5100.48
124_Q205_G0.5090.47
499_V515_L0.5090.47
529_S543_A0.5090.47
132_S515_L0.5080.47
260_P263_Q0.5080.47
160_A226_C0.5060.47
519_L528_V0.5060.47
280_L393_N0.5050.47
294_K335_R0.5030.47
185_P269_I0.5030.47
200_K539_V0.5030.47
451_I543_A0.5020.46
53_G108_G0.5020.46
257_A260_P0.5020.46
569_I576_L0.5010.46
337_N436_T0.5010.46
127_H130_F0.5010.46
260_P356_T0.5000.46
605_H610_A0.5000.46
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
2gp4A 2 0.7863 100 0.138 Contact Map
3nojA 5 0.3084 71.6 0.983 Contact Map
1q5xA 3 0.2107 70.9 0.983 Contact Map
3rfqA 5 0.2 69.8 0.984 Contact Map
1nxjA 3 0.1969 68.5 0.984 Contact Map
1j3lA 3 0.2183 68 0.984 Contact Map
2pcnA 3 0.2137 64.6 0.984 Contact Map
1vi4A 1 0.2137 57.5 0.985 Contact Map
3c8oA 4 0.2107 51.4 0.985 Contact Map
1di6A 3 0.2244 47.1 0.986 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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