YAGF - ECOLI - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

YAGF - Uncharacterized protein YagF

UniProt:	P77596	Sequences: MTIEKIFTPQDDAFYAVITHAAGPQGALPLTPQMLMESPSGNLFGMTQNAGMGWDANKLTGKEVLIIGTQGGIRAGDGRPIALGYHTGHWEIGMQMQAAAKEITRNGGIPFAAFVSDPCDGRSQGTHGMFDSLPYRNDAAIVFRRLIRSLPTRRAVIGVATCDKGLPATMIALAAMHDLPTILVPGGATLPPTVGEDAGKVQTIGARFANHELSLQEAAELGCRACASPGGGCQFLGTAGTSQVVAEALGLALPHSALAPSGQAVWLEIARQSARAVSELDSRGITTRDILSDKAIENAMVIHAAFGGSTNLLLHIPAIAHAAGCTIPDVEHWTRINRKVPRLVSVLPNGPDYHPTVRAFLAGGVPEVMLHLRDLGLLHLDAMTVTGQTVGENLEWWQASERRARFRQCLREQDGVEPDDVILPPEKAKAKGLTSTVCFPTGNIAPEGSVIKATAIDPSVVGEDGVYHHTGRVRVFVSEAQAIKAIKREEIVQGDIMVVIGGGPSGTGMEETYQLTSALKHISWGKTVSLITDARFSGVSTGACFGHVSPEALAGGPIGKLRDNDIIEIAVDRLTLTGSVNFIGTADNPLTPEEGARELARRQTHPDLHAHDFLPDDTRLWAALQSVSGGTWKGCIYDTDKIIEVINAGKKALGI	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG13345
Length:	655 (547)
Sequences:	4805 (1913)
Seq/√Len:	81.8

ECOLI - YAGF YJHG EDD ILVD
BACSU - ILVD
SULSO - ILVD

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
470_T	568_E	4.564	1.00
560_K	589_P	4.320	1.00
291_L	296_I	3.971	1.00
294_K	379_H	3.708	1.00
470_T	579_S	3.586	1.00
446_P	557_P	3.536	1.00
568_E	579_S	3.519	1.00
297_E	379_H	3.441	1.00
560_K	585_T	3.433	1.00
493_Q	527_T	3.327	1.00
470_T	566_I	3.285	1.00
286_T	289_D	3.215	1.00
570_A	573_R	3.202	1.00
562_R	591_T	3.158	1.00
155_A	281_D	3.057	1.00
380_L	391_G	2.984	1.00
214_S	217_E	2.891	1.00
561_L	578_G	2.889	1.00
373_R	380_L	2.843	1.00
566_I	579_S	2.746	1.00
178_D	288_R	2.731	1.00
76_G	155_A	2.696	1.00
178_D	289_D	2.689	1.00
447_E	615_P	2.649	1.00
423_L	427_K	2.636	1.00
474_R	495_D	2.628	1.00
207_R	212_E	2.591	1.00
568_E	577_T	2.563	1.00
474_R	563_D	2.481	1.00
472_R	566_I	2.470	1.00
562_R	584_G	2.452	1.00
291_L	295_A	2.418	1.00
331_E	441_T	2.402	1.00
505_S	554_A	2.398	1.00
386_T	393_N	2.391	1.00
581_N	584_G	2.375	1.00
184_V	273_S	2.360	1.00
251_L	291_L	2.353	1.00
276_A	279_E	2.352	1.00
478_S	481_Q	2.324	1.00
302_I	369_M	2.306	1.00
182_I	277_V	2.299	1.00
443_N	577_T	2.293	1.00
170_M	251_L	2.278	1.00
301_V	339_K	2.278	1.00
202_Q	539_V	2.272	1.00
334_T	338_R	2.206	1.00
531_I	548_V	2.195	1.00
468_H	570_A	2.193	1.00
584_G	587_D	2.177	1.00
294_K	381_D	2.174	1.00
175_A	291_L	2.170	1.00
62_K	223_C	2.164	1.00
300_M	333_W	2.140	1.00
449_S	576_L	2.140	1.00
170_M	319_I	2.124	1.00
62_K	68_G	2.117	1.00
301_V	340_V	2.114	1.00
477_V	500_I	2.075	1.00
388_Q	392_E	2.075	1.00
582_F	586_A	2.065	1.00
304_A	336_I	2.058	1.00
580_V	585_T	2.056	1.00
382_A	390_V	1.989	1.00
190_L	262_G	1.946	1.00
293_D	297_E	1.936	1.00
329_D	332_H	1.922	1.00
76_G	281_D	1.922	1.00
208_F	213_L	1.903	1.00
587_D	590_L	1.894	1.00
276_A	283_R	1.888	1.00
444_I	561_L	1.886	1.00
272_Q	275_R	1.886	1.00
108_G	278_S	1.869	1.00
208_F	215_L	1.853	1.00
158_G	181_T	1.847	1.00
596_A	600_A	1.846	1.00
467_Y	572_D	1.835	1.00
246_A	252_A	1.834	1.00
578_G	585_T	1.824	1.00
587_D	591_T	1.824	1.00
182_I	276_A	1.817	1.00
334_T	574_L	1.817	1.00
477_V	481_Q	1.799	1.00
369_M	390_V	1.790	1.00
561_L	567_I	1.778	1.00
297_E	335_R	1.766	1.00
438_C	574_L	1.761	1.00
389_T	392_E	1.758	1.00
265_V	360_F	1.754	1.00
155_A	277_V	1.753	1.00
369_M	394_L	1.711	1.00
592_P	595_G	1.705	1.00
561_L	580_V	1.684	1.00
252_A	256_S	1.680	1.00
585_T	589_P	1.669	1.00
468_H	572_D	1.656	1.00
279_E	282_S	1.656	1.00
105_R	275_R	1.656	1.00
605_H	609_H	1.653	1.00
173_L	181_T	1.645	1.00
301_V	336_I	1.632	1.00
484_K	488_R	1.631	1.00
103_I	108_G	1.629	1.00
300_M	327_I	1.616	1.00
94_M	267_L	1.611	1.00
182_I	385_V	1.606	1.00
586_A	590_L	1.591	1.00
241_T	308_G	1.589	1.00
213_L	217_E	1.589	1.00
468_H	568_E	1.573	1.00
279_E	283_R	1.566	1.00
557_P	585_T	1.521	0.99
104_T	110_P	1.521	0.99
248_A	302_I	1.518	0.99
477_V	501_G	1.517	0.99
469_H	472_R	1.517	0.99
78_G	103_I	1.515	0.99
549_S	615_P	1.506	0.99
475_V	561_L	1.503	0.99
338_R	434_T	1.498	0.99
476_F	485_A	1.487	0.99
280_L	285_I	1.483	0.99
586_A	589_P	1.479	0.99
472_R	495_D	1.478	0.99
335_R	339_K	1.478	0.99
485_A	491_I	1.472	0.99
476_F	490_E	1.469	0.99
332_H	335_R	1.466	0.99
175_A	323_A	1.462	0.99
191_P	356_T	1.459	0.99
298_N	382_A	1.458	0.99
86_H	117_D	1.455	0.99
147_I	156_V	1.447	0.99
46_M	50_A	1.445	0.99
293_D	332_H	1.443	0.99
80_P	111_F	1.433	0.99
80_P	112_A	1.430	0.99
256_S	269_I	1.428	0.99
98_A	271_R	1.424	0.99
580_V	584_G	1.403	0.99
171_I	322_A	1.398	0.99
97_Q	101_K	1.394	0.99
99_A	157_I	1.391	0.99
194_V	217_E	1.391	0.99
199_G	221_L	1.379	0.99
172_A	287_T	1.376	0.99
96_M	159_V	1.370	0.99
489_E	522_I	1.370	0.99
473_V	567_I	1.364	0.99
559_G	592_P	1.360	0.99
294_K	297_E	1.351	0.99
359_A	368_V	1.344	0.99
101_K	104_T	1.342	0.99
68_G	219_A	1.339	0.99
321_H	616_D	1.338	0.99
92_I	161_T	1.336	0.99
577_T	582_F	1.336	0.99
251_L	287_T	1.328	0.99
388_Q	393_N	1.326	0.98
313_L	317_P	1.312	0.98
70_Q	73_I	1.311	0.98
102_E	274_A	1.305	0.98
352_D	420_D	1.302	0.98
473_V	561_L	1.301	0.98
98_A	267_L	1.298	0.98
345_S	351_P	1.296	0.98
76_G	103_I	1.294	0.98
103_I	274_A	1.291	0.98
79_R	147_I	1.289	0.98
241_T	312_L	1.288	0.98
291_L	323_A	1.284	0.98
84_G	100_A	1.279	0.98
481_Q	484_K	1.277	0.98
493_Q	524_W	1.275	0.98
394_L	397_W	1.271	0.98
316_I	327_I	1.263	0.98
290_I	295_A	1.260	0.98
375_L	425_P	1.256	0.98
118_P	149_S	1.256	0.98
258_L	354_H	1.242	0.98
331_E	335_R	1.238	0.98
296_I	319_I	1.234	0.98
93_G	97_Q	1.229	0.98
170_M	246_A	1.223	0.97
475_V	563_D	1.223	0.97
293_D	335_R	1.221	0.97
419_D	427_K	1.221	0.97
371_H	374_D	1.219	0.97
79_R	156_V	1.212	0.97
220_E	224_R	1.201	0.97
498_V	567_I	1.195	0.97
443_N	582_F	1.192	0.97
248_A	369_M	1.191	0.97
371_H	419_D	1.190	0.97
560_K	580_V	1.188	0.97
66_I	111_F	1.184	0.97
378_L	390_V	1.182	0.97
447_E	549_S	1.182	0.97
326_T	616_D	1.179	0.97
474_R	492_V	1.176	0.97
157_I	274_A	1.174	0.97
498_V	561_L	1.174	0.97
178_D	286_T	1.171	0.97
451_I	569_I	1.166	0.97
172_A	177_H	1.163	0.97
520_K	525_G	1.163	0.97
85_Y	153_R	1.163	0.97
558_I	561_L	1.162	0.97
157_I	277_V	1.161	0.96
597_R	600_A	1.159	0.96
468_H	573_R	1.158	0.96
480_A	484_K	1.157	0.96
102_E	105_R	1.157	0.96
200_K	353_Y	1.155	0.96
549_S	613_F	1.150	0.96
585_T	588_N	1.150	0.96
497_M	519_L	1.145	0.96
105_R	271_R	1.144	0.96
373_R	378_L	1.136	0.96
61_G	64_V	1.135	0.96
98_A	101_K	1.130	0.96
424_P	427_K	1.122	0.96
158_G	183_L	1.109	0.95
75_A	111_F	1.107	0.95
185_P	256_S	1.106	0.95
46_M	49_N	1.105	0.95
116_S	142_V	1.104	0.95
82_A	93_G	1.103	0.95
480_A	510_E	1.098	0.95
457_D	526_K	1.096	0.95
48_Q	61_G	1.094	0.95
66_I	109_I	1.094	0.95
195_G	217_E	1.091	0.95
373_R	391_G	1.089	0.95
389_T	393_N	1.088	0.95
293_D	326_T	1.087	0.95
68_G	223_C	1.087	0.95
342_R	430_A	1.084	0.95
439_F	450_V	1.083	0.95
612_D	616_D	1.082	0.95
258_L	360_F	1.079	0.95
560_K	592_P	1.075	0.95
143_F	172_A	1.073	0.95
474_R	485_A	1.069	0.94
219_A	223_C	1.066	0.94
77_D	156_V	1.062	0.94
529_S	569_I	1.058	0.94
297_E	332_H	1.057	0.94
472_R	492_V	1.054	0.94
130_F	510_E	1.053	0.94
77_D	147_I	1.051	0.94
289_D	383_M	1.045	0.94
160_A	166_L	1.039	0.94
495_D	563_D	1.038	0.94
447_E	616_D	1.037	0.93
280_L	283_R	1.036	0.93
375_L	426_E	1.035	0.93
101_K	271_R	1.034	0.93
198_A	356_T	1.031	0.93
399_A	419_D	1.023	0.93
373_R	394_L	1.022	0.93
443_N	578_G	1.020	0.93
259_A	263_Q	1.018	0.93
356_T	361_L	1.018	0.93
474_R	491_I	1.016	0.93
254_P	393_N	1.014	0.93
199_G	203_T	1.013	0.93
94_M	97_Q	1.011	0.93
392_E	395_E	1.010	0.93
447_E	613_F	1.010	0.93
370_L	397_W	1.007	0.92
613_F	616_D	1.004	0.92
557_P	578_G	0.993	0.92
491_I	497_M	0.990	0.92
249_L	296_I	0.989	0.92
492_V	495_D	0.989	0.92
276_A	280_L	0.985	0.92
502_G	510_E	0.981	0.91
370_L	396_W	0.976	0.91
190_L	228_S	0.976	0.91
190_L	263_Q	0.973	0.91
459_S	526_K	0.972	0.91
314_L	317_P	0.972	0.91
199_G	202_Q	0.972	0.91
444_I	557_P	0.970	0.91
55_D	204_I	0.969	0.91
81_I	169_T	0.961	0.91
158_G	173_L	0.960	0.91
374_D	425_P	0.955	0.90
303_H	312_L	0.951	0.90
285_I	383_M	0.944	0.90
580_V	589_P	0.944	0.90
516_T	536_F	0.942	0.90
597_R	605_H	0.942	0.90
390_V	393_N	0.941	0.90
370_L	373_R	0.940	0.90
438_C	572_D	0.939	0.90
477_V	562_R	0.936	0.89
293_D	325_C	0.935	0.89
343_L	425_P	0.927	0.89
228_S	264_A	0.922	0.89
249_L	299_A	0.922	0.89
492_V	524_W	0.916	0.88
306_F	368_V	0.916	0.88
498_V	578_G	0.916	0.88
172_A	175_A	0.914	0.88
493_Q	526_K	0.912	0.88
557_P	589_P	0.908	0.88
595_G	598_E	0.907	0.88
126_T	151_P	0.907	0.88
71_G	109_I	0.906	0.88
141_I	606_P	0.905	0.88
139_A	168_A	0.903	0.88
182_I	273_S	0.903	0.88
374_D	399_A	0.902	0.88
259_A	269_I	0.901	0.88
194_V	221_L	0.895	0.87
175_A	251_L	0.894	0.87
90_W	229_P	0.893	0.87
253_L	276_A	0.892	0.87
603_Q	620_L	0.891	0.87
496_I	567_I	0.889	0.87
373_R	395_E	0.889	0.87
419_D	424_P	0.887	0.87
101_K	105_R	0.884	0.87
607_D	611_H	0.883	0.86
91_E	186_G	0.882	0.86
268_E	272_Q	0.881	0.86
131_D	148_R	0.881	0.86
545_F	569_I	0.877	0.86
201_V	205_G	0.874	0.86
108_G	274_A	0.871	0.86
75_A	109_I	0.871	0.86
589_P	592_P	0.867	0.85
264_A	268_E	0.865	0.85
440_P	449_S	0.862	0.85
451_I	571_V	0.859	0.85
555_G	592_P	0.859	0.85
338_R	574_L	0.857	0.85
351_P	420_D	0.857	0.85
276_A	285_I	0.855	0.85
63_E	87_T	0.851	0.84
190_L	260_P	0.846	0.84
290_I	383_M	0.844	0.84
474_R	490_E	0.842	0.84
340_V	377_L	0.842	0.84
391_G	395_E	0.841	0.84
520_K	544_C	0.841	0.84
138_D	603_Q	0.839	0.84
96_M	112_A	0.839	0.84
252_A	273_S	0.839	0.84
614_L	617_D	0.836	0.83
251_L	290_I	0.836	0.83
470_T	577_T	0.835	0.83
284_G	287_T	0.834	0.83
204_I	221_L	0.833	0.83
102_E	271_R	0.830	0.83
92_I	186_G	0.830	0.83
48_Q	152_T	0.830	0.83
578_G	581_N	0.829	0.83
371_H	426_E	0.825	0.83
362_A	419_D	0.820	0.82
302_I	365_V	0.820	0.82
186_G	232_G	0.818	0.82
288_R	324_G	0.817	0.82
601_R	605_H	0.816	0.82
499_V	502_G	0.815	0.82
58_K	222_G	0.815	0.82
127_H	599_L	0.814	0.82
295_A	383_M	0.813	0.82
285_I	289_D	0.812	0.82
79_R	143_F	0.812	0.82
100_A	112_A	0.810	0.81
160_A	183_L	0.809	0.81
383_M	388_Q	0.809	0.81
438_C	453_A	0.809	0.81
193_T	198_A	0.808	0.81
73_I	109_I	0.808	0.81
62_K	71_G	0.806	0.81
265_V	268_E	0.804	0.81
118_P	145_R	0.803	0.81
491_I	563_D	0.800	0.81
181_T	287_T	0.797	0.80
44_F	148_R	0.796	0.80
274_A	277_V	0.795	0.80
143_F	169_T	0.793	0.80
195_G	220_E	0.792	0.80
336_I	339_K	0.791	0.80
345_S	423_L	0.791	0.80
157_I	184_V	0.790	0.80
339_K	377_L	0.790	0.80
460_V	469_H	0.788	0.80
568_E	575_T	0.788	0.80
103_I	157_I	0.788	0.80
383_M	393_N	0.788	0.80
280_L	385_V	0.786	0.79
548_V	558_I	0.786	0.79
52_M	208_F	0.785	0.79
431_K	434_T	0.785	0.79
345_S	352_D	0.782	0.79
215_L	219_A	0.780	0.79
506_G	510_E	0.779	0.79
606_P	610_A	0.779	0.79
477_V	595_G	0.778	0.79
469_H	496_I	0.777	0.79
583_I	587_D	0.777	0.79
245_V	303_H	0.776	0.79
73_I	105_R	0.776	0.79
326_T	329_D	0.774	0.78
106_N	274_A	0.774	0.78
296_I	325_C	0.773	0.78
486_I	515_L	0.773	0.78
334_T	438_C	0.770	0.78
582_F	585_T	0.769	0.78
391_G	394_L	0.767	0.78
321_H	326_T	0.764	0.77
207_R	217_E	0.761	0.77
80_P	92_I	0.759	0.77
580_V	586_A	0.757	0.77
255_H	360_F	0.755	0.77
359_A	422_I	0.754	0.77
383_M	386_T	0.754	0.77
301_V	377_L	0.753	0.76
175_A	296_I	0.752	0.76
390_V	394_L	0.751	0.76
294_K	382_A	0.748	0.76
380_L	394_L	0.745	0.76
313_L	450_V	0.744	0.76
498_V	548_V	0.743	0.75
118_P	132_S	0.742	0.75
197_D	351_P	0.741	0.75
78_G	100_A	0.739	0.75
77_D	153_R	0.737	0.75
370_L	374_D	0.737	0.75
285_I	393_N	0.736	0.75
195_G	198_A	0.735	0.75
545_F	548_V	0.735	0.75
119_C	123_S	0.734	0.75
580_V	588_N	0.732	0.74
244_V	306_F	0.731	0.74
477_V	563_D	0.731	0.74
369_M	378_L	0.730	0.74
444_I	500_I	0.729	0.74
78_G	99_A	0.728	0.74
117_D	165_G	0.728	0.74
292_S	295_A	0.728	0.74
584_G	588_N	0.727	0.74
62_K	65_L	0.726	0.74
379_H	382_A	0.726	0.74
444_I	577_T	0.726	0.74
81_I	160_A	0.726	0.74
78_G	156_V	0.726	0.74
145_R	603_Q	0.726	0.74
170_M	291_L	0.725	0.74
54_W	57_N	0.725	0.74
531_I	561_L	0.723	0.73
156_V	181_T	0.723	0.73
612_D	619_R	0.720	0.73
175_A	295_A	0.719	0.73
244_V	257_A	0.718	0.73
81_I	115_V	0.718	0.73
160_A	169_T	0.716	0.73
457_D	460_V	0.715	0.73
185_P	266_W	0.713	0.72
50_A	72_G	0.713	0.72
236_L	306_F	0.712	0.72
267_L	271_R	0.710	0.72
483_I	514_Q	0.709	0.72
203_T	206_A	0.707	0.72
540_S	544_C	0.707	0.72
185_P	243_Q	0.707	0.72
481_Q	485_A	0.706	0.72
138_D	145_R	0.705	0.72
491_I	495_D	0.704	0.71
280_L	290_I	0.701	0.71
501_G	559_G	0.701	0.71
207_R	213_L	0.700	0.71
300_M	316_I	0.698	0.71
313_L	333_W	0.698	0.71
600_A	605_H	0.697	0.71
381_D	391_G	0.697	0.71
350_G	354_H	0.697	0.71
251_L	292_S	0.696	0.71
48_Q	126_T	0.693	0.70
441_T	447_E	0.693	0.70
208_F	214_S	0.693	0.70
99_A	159_V	0.693	0.70
47_T	152_T	0.693	0.70
61_G	65_L	0.691	0.70
582_F	588_N	0.691	0.70
194_V	220_E	0.690	0.70
124_Q	235_F	0.689	0.70
330_V	615_P	0.689	0.70
296_I	327_I	0.689	0.70
471_G	496_I	0.683	0.69
581_N	587_D	0.682	0.69
55_D	218_A	0.678	0.69
200_K	203_T	0.677	0.68
273_S	277_V	0.677	0.68
496_I	529_S	0.675	0.68
88_G	119_C	0.675	0.68
490_E	495_D	0.674	0.68
53_G	152_T	0.674	0.68
509_M	614_L	0.674	0.68
189_T	226_C	0.673	0.68
295_A	325_C	0.671	0.68
606_P	620_L	0.670	0.68
197_D	217_E	0.669	0.68
270_A	273_S	0.668	0.67
366_P	393_N	0.668	0.67
106_N	278_S	0.667	0.67
382_A	391_G	0.664	0.67
115_V	142_V	0.664	0.67
305_A	343_L	0.664	0.67
102_E	275_R	0.664	0.67
102_E	106_N	0.663	0.67
570_A	575_T	0.663	0.67
67_I	71_G	0.662	0.67
79_R	113_A	0.662	0.67
300_M	336_I	0.661	0.67
92_I	96_M	0.660	0.67
251_L	295_A	0.659	0.66
93_G	112_A	0.659	0.66
297_E	381_D	0.658	0.66
472_R	496_I	0.657	0.66
490_E	563_D	0.657	0.66
259_A	360_F	0.657	0.66
377_L	425_P	0.657	0.66
371_H	425_P	0.655	0.66
350_G	353_Y	0.655	0.66
76_G	277_V	0.654	0.66
295_A	323_A	0.654	0.66
301_V	372_L	0.654	0.66
376_G	380_L	0.654	0.66
86_H	146_L	0.652	0.66
483_I	518_A	0.652	0.66
334_T	337_N	0.651	0.65
83_L	146_L	0.650	0.65
182_I	280_L	0.649	0.65
367_E	422_I	0.648	0.65
598_E	602_R	0.648	0.65
456_I	571_V	0.647	0.65
338_R	438_C	0.647	0.65
103_I	277_V	0.647	0.65
482_A	497_M	0.647	0.65
178_D	287_T	0.646	0.65
344_V	368_V	0.643	0.65
193_T	196_E	0.643	0.65
194_V	213_L	0.643	0.65
49_N	75_A	0.643	0.65
98_A	102_E	0.642	0.64
288_R	601_R	0.642	0.64
268_E	271_R	0.641	0.64
472_R	568_E	0.641	0.64
476_F	491_I	0.640	0.64
248_A	365_V	0.640	0.64
61_G	66_I	0.638	0.64
62_K	222_G	0.638	0.64
487_K	539_V	0.637	0.64
320_A	325_C	0.636	0.64
571_V	574_L	0.635	0.64
271_R	275_R	0.632	0.63
246_A	319_I	0.632	0.63
349_N	455_A	0.631	0.63
176_M	322_A	0.631	0.63
81_I	117_D	0.630	0.63
161_T	186_G	0.629	0.63
77_D	113_A	0.628	0.63
89_H	189_T	0.628	0.63
457_D	467_Y	0.626	0.62
229_P	262_G	0.626	0.62
245_V	316_I	0.626	0.62
370_L	394_L	0.626	0.62
248_A	378_L	0.624	0.62
288_R	323_A	0.624	0.62
276_A	385_V	0.623	0.62
93_G	100_A	0.623	0.62
290_I	384_T	0.622	0.62
291_L	327_I	0.622	0.62
206_A	541_T	0.621	0.62
590_L	593_E	0.618	0.61
434_T	467_Y	0.618	0.61
245_V	249_L	0.618	0.61
246_A	251_L	0.617	0.61
553_L	611_H	0.617	0.61
475_V	578_G	0.616	0.61
134_P	603_Q	0.616	0.61
138_D	142_V	0.615	0.61
572_D	575_T	0.615	0.61
324_G	601_R	0.615	0.61
346_V	359_A	0.614	0.61
300_M	329_D	0.613	0.61
208_F	218_A	0.613	0.61
349_N	454_T	0.611	0.61
438_C	451_I	0.610	0.60
64_V	109_I	0.609	0.60
374_D	426_E	0.609	0.60
580_V	587_D	0.608	0.60
485_A	563_D	0.607	0.60
334_T	434_T	0.607	0.60
209_A	487_K	0.606	0.60
83_L	117_D	0.606	0.60
200_K	204_I	0.606	0.60
228_S	262_G	0.605	0.60
420_D	423_L	0.604	0.60
104_T	109_I	0.603	0.60
74_R	108_G	0.603	0.60
78_G	96_M	0.603	0.60
260_P	360_F	0.603	0.60
602_R	605_H	0.602	0.59
200_K	205_G	0.602	0.59
567_I	578_G	0.602	0.59
115_V	169_T	0.602	0.59
191_P	234_Q	0.601	0.59
278_S	281_D	0.601	0.59
342_R	429_K	0.601	0.59
382_A	389_T	0.601	0.59
370_L	398_Q	0.599	0.59
70_Q	275_R	0.599	0.59
553_L	594_E	0.599	0.59
255_H	366_P	0.599	0.59
327_I	333_W	0.598	0.59
386_T	389_T	0.597	0.59
306_F	359_A	0.596	0.59
399_A	418_P	0.596	0.59
142_V	146_L	0.596	0.59
444_I	578_G	0.595	0.59
84_G	112_A	0.595	0.59
342_R	454_T	0.594	0.58
179_L	287_T	0.594	0.58
334_T	441_T	0.594	0.58
44_F	152_T	0.593	0.58
343_L	371_H	0.592	0.58
292_S	325_C	0.591	0.58
97_Q	100_A	0.590	0.58
207_R	210_N	0.589	0.58
205_G	235_F	0.589	0.58
581_N	585_T	0.587	0.58
484_K	490_E	0.587	0.58
292_S	382_A	0.587	0.58
301_V	379_H	0.585	0.57
204_I	218_A	0.584	0.57
304_A	435_S	0.583	0.57
597_R	602_R	0.583	0.57
67_I	70_Q	0.583	0.57
554_A	592_P	0.582	0.57
469_H	543_A	0.582	0.57
66_I	71_G	0.581	0.57
342_R	435_S	0.580	0.57
248_A	382_A	0.580	0.57
386_T	392_E	0.580	0.57
57_N	125_G	0.579	0.57
577_T	580_V	0.579	0.57
555_G	560_K	0.579	0.57
472_R	578_G	0.578	0.56
95_Q	98_A	0.578	0.56
51_G	54_W	0.578	0.56
304_A	337_N	0.577	0.56
78_G	112_A	0.576	0.56
380_L	395_E	0.576	0.56
193_T	361_L	0.575	0.56
80_P	237_G	0.573	0.56
59_L	204_I	0.573	0.56
481_Q	490_E	0.572	0.56
88_G	165_G	0.572	0.56
62_K	219_A	0.572	0.56
589_P	593_E	0.570	0.55
244_V	354_H	0.569	0.55
143_F	158_G	0.569	0.55
583_I	586_A	0.569	0.55
388_Q	396_W	0.569	0.55
473_V	496_I	0.566	0.55
330_V	448_G	0.566	0.55
216_Q	220_E	0.566	0.55
243_Q	257_A	0.565	0.55
125_G	514_Q	0.563	0.54
234_Q	347_L	0.563	0.54
362_A	422_I	0.562	0.54
554_A	613_F	0.562	0.54
266_W	269_I	0.562	0.54
499_V	540_S	0.562	0.54
313_L	439_F	0.561	0.54
451_I	456_I	0.560	0.54
269_I	273_S	0.559	0.54
156_V	177_H	0.559	0.54
384_T	393_N	0.559	0.54
272_Q	276_A	0.558	0.54
148_R	152_T	0.558	0.54
469_H	529_S	0.557	0.54
371_H	424_P	0.557	0.54
444_I	558_I	0.556	0.54
103_I	278_S	0.556	0.54
204_I	225_A	0.555	0.53
56_A	205_G	0.554	0.53
278_S	282_S	0.552	0.53
438_C	571_V	0.551	0.53
85_Y	146_L	0.550	0.53
310_T	547_H	0.550	0.53
457_D	543_A	0.549	0.53
472_R	579_S	0.549	0.53
502_G	506_G	0.548	0.52
486_I	518_A	0.548	0.52
343_L	368_V	0.547	0.52
420_D	427_K	0.547	0.52
343_L	423_L	0.546	0.52
283_R	289_D	0.546	0.52
79_R	117_D	0.545	0.52
519_L	523_S	0.545	0.52
607_D	617_D	0.544	0.52
53_G	209_A	0.543	0.52
202_Q	347_L	0.543	0.52
307_G	454_T	0.542	0.52
95_Q	159_V	0.542	0.52
45_G	48_Q	0.540	0.51
372_L	378_L	0.539	0.51
586_A	591_T	0.538	0.51
245_V	257_A	0.538	0.51
185_P	252_A	0.538	0.51
82_A	96_M	0.538	0.51
451_I	545_F	0.537	0.51
228_S	263_Q	0.536	0.51
352_D	421_V	0.536	0.51
552_A	558_I	0.536	0.51
293_D	379_H	0.535	0.51
62_K	268_E	0.535	0.51
203_T	347_L	0.534	0.51
69_T	272_Q	0.534	0.51
472_R	563_D	0.534	0.51
183_L	256_S	0.534	0.51
400_S	418_P	0.534	0.51
263_Q	360_F	0.534	0.51
456_I	460_V	0.534	0.51
345_S	429_K	0.533	0.51
175_A	288_R	0.533	0.51
277_V	281_D	0.533	0.51
217_E	220_E	0.532	0.50
482_A	516_T	0.532	0.50
374_D	391_G	0.532	0.50
327_I	331_E	0.531	0.50
213_L	221_L	0.531	0.50
193_T	197_D	0.530	0.50
191_P	358_R	0.530	0.50
172_A	179_L	0.530	0.50
485_A	490_E	0.530	0.50
554_A	615_P	0.530	0.50
196_E	206_A	0.529	0.50
123_S	126_T	0.528	0.50
60_T	63_E	0.528	0.50
194_V	199_G	0.528	0.50
173_L	183_L	0.528	0.50
114_F	159_V	0.528	0.50
474_R	493_Q	0.528	0.50
181_T	251_L	0.528	0.50
193_T	221_L	0.528	0.50
61_G	71_G	0.527	0.50
99_A	277_V	0.527	0.50
566_I	578_G	0.527	0.50
291_L	382_A	0.527	0.50
483_I	487_K	0.526	0.50
329_D	335_R	0.526	0.50
443_N	557_P	0.524	0.49
560_K	593_E	0.524	0.49
291_L	319_I	0.524	0.49
123_S	132_S	0.523	0.49
243_Q	266_W	0.522	0.49
202_Q	205_G	0.522	0.49
272_Q	279_E	0.521	0.49
124_Q	237_G	0.521	0.49
89_H	119_C	0.521	0.49
124_Q	513_Y	0.521	0.49
127_H	148_R	0.520	0.49
141_I	536_F	0.520	0.49
175_A	287_T	0.520	0.49
172_A	181_T	0.519	0.49
256_S	266_W	0.518	0.49
79_R	114_F	0.518	0.49
345_S	420_D	0.518	0.49
434_T	453_A	0.518	0.49
458_P	467_Y	0.518	0.49
83_L	114_F	0.517	0.48
539_V	544_C	0.517	0.48
555_G	589_P	0.517	0.48
91_E	261_S	0.516	0.48
116_S	146_L	0.516	0.48
280_L	289_D	0.516	0.48
303_H	308_G	0.516	0.48
235_F	513_Y	0.516	0.48
559_G	590_L	0.515	0.48
343_L	372_L	0.515	0.48
456_I	543_A	0.514	0.48
74_R	278_S	0.514	0.48
460_V	467_Y	0.514	0.48
279_E	285_I	0.513	0.48
437_V	467_Y	0.513	0.48
447_E	554_A	0.512	0.48
77_D	111_F	0.512	0.48
177_H	510_E	0.512	0.48
520_K	541_T	0.510	0.48
95_Q	102_E	0.510	0.48
534_A	618_T	0.510	0.48
124_Q	205_G	0.509	0.47
499_V	515_L	0.509	0.47
529_S	543_A	0.509	0.47
132_S	515_L	0.508	0.47
260_P	263_Q	0.508	0.47
160_A	226_C	0.506	0.47
519_L	528_V	0.506	0.47
280_L	393_N	0.505	0.47
294_K	335_R	0.503	0.47
185_P	269_I	0.503	0.47
200_K	539_V	0.503	0.47
451_I	543_A	0.502	0.46
53_G	108_G	0.502	0.46
257_A	260_P	0.502	0.46
569_I	576_L	0.501	0.46
337_N	436_T	0.501	0.46
127_H	130_F	0.501	0.46
260_P	356_T	0.500	0.46
605_H	610_A	0.500	0.46

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2gp4A	2	0.7863	100	0.138	Contact Map
3nojA	5	0.3084	71.6	0.983	Contact Map
1q5xA	3	0.2107	70.9	0.983	Contact Map
3rfqA	5	0.2	69.8	0.984	Contact Map
1nxjA	3	0.1969	68.5	0.984	Contact Map
1j3lA	3	0.2183	68	0.984	Contact Map
2pcnA	3	0.2137	64.6	0.984	Contact Map
1vi4A	1	0.2137	57.5	0.985	Contact Map
3c8oA	4	0.2107	51.4	0.985	Contact Map
1di6A	3	0.2244	47.1	0.986	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0144 seconds.