SUFB - ECOLI - GREMLIN Contacts

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SUFB - FeS cluster assembly protein SufB

UniProt:	P77522	Sequences: MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFRLNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDTCASEPGAVQQTGANAFLSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEHSVG	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG13965
Length:	495 (417)
Sequences:	3036 (1599)
Seq/√Len:	78.3

ECOLI - SUFB SUFD
BACSU - SUFB SUFD
HALSA - Q9HRV6 Q9HRV5
SULSO - Q97ZI1 Q97ZI0

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
216_R	247_Y	5.232	1.00
213_K	244_E	4.975	1.00
307_C	312_S	4.640	1.00
213_K	243_D	4.481	1.00
242_A	279_V	4.390	1.00
275_K	310_E	4.331	1.00
242_A	246_S	4.217	1.00
244_E	275_K	3.985	1.00
454_S	457_D	3.635	1.00
276_N	311_N	3.613	1.00
166_F	209_I	3.593	1.00
273_I	277_A	3.573	1.00
244_E	274_H	3.357	1.00
349_T	382_S	3.349	1.00
367_N	398_N	3.308	1.00
247_Y	278_E	3.192	1.00
168_S	171_E	3.169	1.00
273_I	314_M	3.139	1.00
210_Y	243_D	3.137	1.00
248_V	279_V	3.125	1.00
455_E	459_I	3.038	1.00
305_A	314_M	3.021	1.00
245_D	276_N	2.982	1.00
337_D	367_N	2.964	1.00
311_N	338_N	2.929	1.00
273_I	312_S	2.856	1.00
182_K	274_H	2.801	1.00
54_E	58_E	2.740	1.00
337_D	366_K	2.714	1.00
271_V	279_V	2.688	1.00
347_A	376_G	2.676	1.00
362_I	393_M	2.629	1.00
157_E	161_E	2.565	1.00
278_E	313_K	2.542	1.00
397_T	426_N	2.468	1.00
199_N	237_R	2.439	1.00
165_I	210_Y	2.369	1.00
63_A	200_A	2.334	1.00
340_I	369_K	2.311	1.00
398_N	428_S	2.287	1.00
363_H	370_S	2.270	1.00
449_L	455_E	2.270	1.00
222_S	253_G	2.265	1.00
65_R	69_E	2.263	1.00
306_L	335_R	2.234	1.00
214_G	245_D	2.219	1.00
59_F	200_A	2.219	1.00
381_H	413_N	2.207	1.00
242_A	277_A	2.198	1.00
273_I	279_V	2.182	1.00
383_Q	415_G	2.167	1.00
383_Q	417_H	2.130	1.00
313_K	340_I	2.118	1.00
187_V	272_I	2.103	1.00
242_A	248_V	2.058	1.00
310_E	337_D	2.049	1.00
240_L	250_Y	2.037	1.00
335_R	364_I	2.031	1.00
378_S	382_S	2.028	1.00
211_V	248_V	2.009	1.00
402_F	432_E	1.999	1.00
263_Q	297_I	1.937	1.00
273_I	307_C	1.855	1.00
337_D	365_G	1.843	1.00
275_K	308_E	1.815	1.00
84_N	87_D	1.802	1.00
56_M	173_I	1.792	1.00
221_L	248_V	1.789	1.00
371_T	400_R	1.641	1.00
168_S	205_D	1.636	1.00
333_I	362_I	1.633	1.00
334_L	368_T	1.632	1.00
64_Y	68_L	1.624	1.00
364_I	393_M	1.591	1.00
323_S	326_T	1.587	1.00
352_H	381_H	1.577	1.00
310_E	338_N	1.575	1.00
281_Y	314_M	1.566	0.99
339_S	365_G	1.558	0.99
165_I	212_P	1.557	0.99
392_I	431_L	1.542	0.99
58_E	62_N	1.524	0.99
57_L	61_L	1.519	0.99
399_A	429_A	1.503	0.99
162_Q	218_P	1.492	0.99
185_G	270_E	1.491	0.99
397_T	428_S	1.486	0.99
170_G	205_D	1.474	0.99
349_T	355_A	1.472	0.99
440_I	462_I	1.462	0.99
188_V	268_V	1.455	0.99
351_G	380_G	1.436	0.99
209_I	221_L	1.433	0.99
405_C	418_T	1.426	0.99
122_E	125_A	1.401	0.99
210_Y	241_V	1.375	0.99
418_T	435_A	1.375	0.99
338_N	367_N	1.375	0.99
148_S	228_N	1.372	0.99
384_N	416_A	1.372	0.99
246_S	279_V	1.367	0.99
339_S	368_T	1.365	0.99
55_W	181_R	1.353	0.98
51_N	174_H	1.353	0.98
164_I	211_V	1.350	0.98
66_A	69_E	1.348	0.98
217_C	248_V	1.333	0.98
62_N	65_R	1.330	0.98
346_V	467_C	1.326	0.98
172_A	208_F	1.324	0.98
171_E	175_D	1.309	0.98
308_E	336_G	1.308	0.98
345_S	374_S	1.300	0.98
308_E	335_R	1.297	0.98
387_R	419_F	1.290	0.98
369_K	400_R	1.290	0.98
186_T	272_I	1.288	0.98
354_Q	385_S	1.280	0.98
377_I	467_C	1.278	0.98
275_K	311_N	1.276	0.98
396_A	399_A	1.270	0.98
276_N	338_N	1.264	0.98
157_E	160_A	1.253	0.97
392_I	399_A	1.249	0.97
65_R	68_L	1.238	0.97
357_T	374_S	1.236	0.97
249_S	280_K	1.235	0.97
216_R	245_D	1.222	0.97
249_S	282_S	1.219	0.97
287_W	299_N	1.219	0.97
185_G	199_N	1.218	0.97
395_T	426_N	1.217	0.97
225_F	254_C	1.215	0.97
72_E	195_F	1.213	0.97
453_I	461_M	1.197	0.97
325_I	354_Q	1.195	0.97
274_H	308_E	1.175	0.96
183_Y	272_I	1.164	0.96
365_G	368_T	1.145	0.96
329_Y	358_G	1.140	0.96
86_Q	354_Q	1.131	0.95
378_S	416_A	1.128	0.95
211_V	242_A	1.126	0.95
308_E	312_S	1.125	0.95
307_C	332_C	1.108	0.95
177_P	181_R	1.108	0.95
183_Y	241_V	1.104	0.95
418_T	437_T	1.100	0.95
279_V	314_M	1.099	0.95
165_I	208_F	1.096	0.95
167_C	172_A	1.092	0.94
145_I	152_A	1.089	0.94
332_C	341_G	1.089	0.94
385_S	419_F	1.086	0.94
62_N	66_A	1.086	0.94
424_C	429_A	1.080	0.94
237_R	268_V	1.076	0.94
56_M	203_A	1.076	0.94
319_S	482_A	1.076	0.94
66_A	70_M	1.074	0.94
211_V	217_C	1.072	0.94
390_V	401_N	1.068	0.94
161_E	164_I	1.062	0.94
328_K	357_T	1.056	0.93
167_C	171_E	1.050	0.93
252_E	281_Y	1.045	0.93
66_A	190_G	1.042	0.93
172_A	180_V	1.035	0.93
317_T	344_Y	1.033	0.93
146_F	151_V	1.031	0.93
200_A	237_R	1.030	0.92
54_E	57_L	1.020	0.92
185_G	237_R	1.019	0.92
422_V	431_L	1.015	0.92
226_R	255_S	1.014	0.92
199_N	268_V	1.011	0.92
235_F	266_A	1.007	0.92
280_K	315_S	1.002	0.91
306_L	333_I	1.001	0.91
86_Q	325_I	0.999	0.91
59_F	62_N	0.997	0.91
184_L	239_I	0.997	0.91
391_K	425_R	0.996	0.91
145_I	148_S	0.996	0.91
164_I	215_V	0.996	0.91
71_E	194_F	0.995	0.91
214_G	276_N	0.993	0.91
212_P	241_V	0.983	0.91
241_V	272_I	0.982	0.91
358_G	387_R	0.981	0.91
243_D	274_H	0.979	0.90
366_K	397_T	0.978	0.90
193_N	329_Y	0.975	0.90
212_P	215_V	0.974	0.90
474_L	480_V	0.974	0.90
307_C	314_M	0.972	0.90
184_L	203_A	0.970	0.90
183_Y	239_I	0.970	0.90
281_Y	316_W	0.968	0.90
132_V	135_R	0.967	0.90
407_S	418_T	0.961	0.90
333_I	364_I	0.958	0.89
307_C	341_G	0.957	0.89
166_F	221_L	0.957	0.89
392_I	423_E	0.955	0.89
169_F	173_I	0.947	0.89
368_T	399_A	0.942	0.89
392_I	403_T	0.940	0.89
242_A	273_I	0.936	0.88
378_S	384_N	0.929	0.88
480_V	483_Q	0.928	0.88
334_L	365_G	0.927	0.88
329_Y	387_R	0.914	0.87
338_N	365_G	0.911	0.87
362_I	391_K	0.910	0.87
275_K	338_N	0.910	0.87
56_M	184_L	0.909	0.87
61_L	65_R	0.902	0.86
169_F	180_V	0.901	0.86
67_W	194_F	0.892	0.86
365_G	395_T	0.888	0.86
121_K	125_A	0.885	0.85
85_Y	195_F	0.880	0.85
283_T	301_V	0.880	0.85
225_F	238_T	0.876	0.85
403_T	431_L	0.870	0.84
66_A	191_N	0.870	0.84
453_I	458_A	0.865	0.84
358_G	407_S	0.864	0.84
310_E	336_G	0.861	0.84
387_R	421_Y	0.856	0.83
167_C	175_D	0.853	0.83
208_F	241_V	0.849	0.83
359_T	374_S	0.847	0.83
421_Y	432_E	0.844	0.83
324_A	352_H	0.844	0.83
240_L	271_V	0.844	0.83
426_N	429_A	0.843	0.82
147_D	228_N	0.841	0.82
350_S	380_G	0.839	0.82
310_E	367_N	0.837	0.82
379_A	411_G	0.836	0.82
81_D	327_W	0.836	0.82
213_K	275_K	0.836	0.82
448_C	453_I	0.835	0.82
421_Y	425_R	0.834	0.82
283_T	299_N	0.833	0.82
254_C	299_N	0.833	0.82
403_T	422_V	0.828	0.81
239_I	270_E	0.827	0.81
225_F	252_E	0.827	0.81
185_G	239_I	0.827	0.81
448_C	462_I	0.824	0.81
389_L	421_Y	0.823	0.81
283_T	287_W	0.823	0.81
64_Y	202_V	0.822	0.81
163_G	215_V	0.818	0.81
389_L	403_T	0.817	0.80
270_E	304_R	0.815	0.80
302_T	331_S	0.814	0.80
198_L	477_E	0.811	0.80
252_E	283_T	0.810	0.80
322_G	326_T	0.809	0.80
58_E	61_L	0.807	0.80
334_L	438_S	0.803	0.79
367_N	397_T	0.800	0.79
146_F	225_F	0.799	0.79
142_V	219_M	0.799	0.79
392_I	424_C	0.797	0.79
288_F	296_G	0.797	0.79
343_F	361_M	0.793	0.78
74_H	77_K	0.789	0.78
372_I	390_V	0.787	0.78
392_I	400_R	0.785	0.78
244_E	276_N	0.783	0.78
180_V	208_F	0.782	0.77
335_R	365_G	0.782	0.77
360_K	391_K	0.779	0.77
366_K	372_I	0.779	0.77
349_T	378_S	0.777	0.77
236_E	267_A	0.770	0.76
381_H	414_C	0.767	0.76
148_S	203_A	0.766	0.76
125_A	128_E	0.765	0.76
424_C	428_S	0.763	0.76
359_T	372_I	0.760	0.75
72_E	80_Y	0.759	0.75
151_V	156_R	0.758	0.75
214_G	244_E	0.758	0.75
410_I	446_F	0.754	0.75
240_L	248_V	0.753	0.75
276_N	310_E	0.752	0.75
63_A	197_A	0.751	0.75
424_C	431_L	0.748	0.74
345_S	357_T	0.747	0.74
179_L	210_Y	0.747	0.74
397_T	427_N	0.744	0.74
354_Q	374_S	0.744	0.74
271_V	314_M	0.743	0.74
408_M	415_G	0.742	0.74
63_A	201_A	0.740	0.73
60_R	197_A	0.734	0.73
285_Q	353_Q	0.734	0.73
350_S	353_Q	0.732	0.73
69_E	186_T	0.732	0.73
400_R	430_Q	0.728	0.72
238_T	269_V	0.728	0.72
185_G	200_A	0.728	0.72
387_R	416_A	0.726	0.72
377_I	408_M	0.725	0.72
263_Q	287_W	0.725	0.72
372_I	375_K	0.724	0.72
63_A	190_G	0.724	0.72
354_Q	383_Q	0.723	0.72
165_I	183_Y	0.722	0.72
176_H	179_L	0.721	0.72
381_H	411_G	0.720	0.71
124_E	127_F	0.718	0.71
162_Q	217_C	0.715	0.71
176_H	208_F	0.714	0.71
401_N	407_S	0.710	0.70
389_L	423_E	0.710	0.70
184_L	209_I	0.709	0.70
303_K	330_P	0.709	0.70
392_I	429_A	0.708	0.70
248_V	273_I	0.708	0.70
390_V	399_A	0.707	0.70
380_G	411_G	0.707	0.70
397_T	430_Q	0.705	0.70
164_I	217_C	0.704	0.70
147_D	151_V	0.703	0.70
200_A	268_V	0.703	0.70
332_C	343_F	0.702	0.70
144_A	149_V	0.700	0.69
176_H	212_P	0.699	0.69
155_Y	239_I	0.699	0.69
227_I	234_Q	0.698	0.69
343_F	401_N	0.695	0.69
119_L	127_F	0.694	0.69
272_I	306_L	0.693	0.69
269_V	281_Y	0.692	0.68
62_N	190_G	0.690	0.68
143_D	150_S	0.689	0.68
265_H	287_W	0.689	0.68
143_D	153_T	0.688	0.68
435_A	463_V	0.684	0.68
373_I	441_G	0.683	0.67
366_K	396_A	0.683	0.67
387_R	407_S	0.678	0.67
120_S	123_V	0.678	0.67
285_Q	318_Q	0.677	0.67
328_K	374_S	0.677	0.67
239_I	272_I	0.676	0.67
401_N	405_C	0.676	0.67
114_G	117_A	0.676	0.67
158_K	161_E	0.675	0.67
398_N	426_N	0.674	0.66
127_F	130_L	0.673	0.66
289_P	351_G	0.673	0.66
152_A	155_Y	0.672	0.66
394_P	425_R	0.671	0.66
440_I	459_I	0.671	0.66
179_L	182_K	0.671	0.66
199_N	266_A	0.669	0.66
348_L	486_L	0.667	0.66
376_G	405_C	0.664	0.65
120_S	163_G	0.659	0.65
165_I	176_H	0.659	0.65
477_E	481_E	0.659	0.65
197_A	270_E	0.659	0.65
192_D	196_A	0.658	0.65
340_I	371_T	0.658	0.65
311_N	337_D	0.658	0.65
432_E	438_S	0.657	0.64
59_F	181_R	0.656	0.64
358_G	467_C	0.656	0.64
314_M	332_C	0.656	0.64
305_A	312_S	0.655	0.64
425_R	438_S	0.655	0.64
145_I	149_V	0.654	0.64
326_T	355_A	0.653	0.64
394_P	397_T	0.652	0.64
54_E	161_E	0.652	0.64
285_Q	323_S	0.652	0.64
127_F	142_V	0.650	0.64
477_E	480_V	0.648	0.63
394_P	413_N	0.647	0.63
272_I	308_E	0.647	0.63
358_G	401_N	0.646	0.63
227_I	297_I	0.645	0.63
468_K	483_Q	0.644	0.63
424_C	427_N	0.643	0.63
282_S	475_P	0.643	0.63
304_R	435_A	0.643	0.63
285_Q	322_G	0.640	0.62
180_V	239_I	0.640	0.62
237_R	270_E	0.639	0.62
274_H	312_S	0.639	0.62
334_L	339_S	0.639	0.62
142_V	148_S	0.637	0.62
339_S	366_K	0.636	0.62
332_C	438_S	0.635	0.62
342_E	371_T	0.634	0.62
193_N	302_T	0.632	0.61
337_D	398_N	0.632	0.61
115_A	118_F	0.630	0.61
84_N	88_Y	0.629	0.61
306_L	332_C	0.628	0.61
275_K	339_S	0.627	0.61
419_F	432_E	0.626	0.61
358_G	405_C	0.624	0.60
438_S	441_G	0.623	0.60
72_E	88_Y	0.623	0.60
275_K	312_S	0.623	0.60
195_F	300_F	0.622	0.60
399_A	431_L	0.620	0.60
186_T	270_E	0.617	0.60
273_I	332_C	0.616	0.59
408_M	463_V	0.616	0.59
398_N	427_N	0.615	0.59
124_E	128_E	0.611	0.59
426_N	436_T	0.611	0.59
396_A	426_N	0.611	0.59
284_V	321_T	0.608	0.58
59_F	63_A	0.608	0.58
216_R	340_I	0.608	0.58
350_S	448_C	0.607	0.58
344_Y	473_E	0.607	0.58
183_Y	270_E	0.606	0.58
431_L	441_G	0.606	0.58
75_W	87_D	0.605	0.58
375_K	486_L	0.605	0.58
179_L	208_F	0.604	0.58
220_E	408_M	0.604	0.58
159_L	218_P	0.604	0.58
192_D	304_R	0.602	0.58
85_Y	403_T	0.600	0.57
81_D	397_T	0.599	0.57
173_I	176_H	0.599	0.57
254_C	283_T	0.597	0.57
229_A	232_T	0.596	0.57
280_K	475_P	0.594	0.57
52_E	61_L	0.594	0.57
145_I	224_Y	0.592	0.56
327_W	434_E	0.592	0.56
161_E	218_P	0.591	0.56
363_H	393_M	0.591	0.56
164_I	410_I	0.591	0.56
172_A	179_L	0.591	0.56
225_F	444_Q	0.590	0.56
328_K	438_S	0.589	0.56
338_N	369_K	0.589	0.56
307_C	339_S	0.588	0.56
329_Y	403_T	0.587	0.56
289_P	296_G	0.585	0.56
113_T	251_I	0.585	0.56
361_M	370_S	0.584	0.55
427_N	430_Q	0.584	0.55
419_F	426_N	0.583	0.55
212_P	243_D	0.583	0.55
408_M	492_H	0.582	0.55
305_A	332_C	0.582	0.55
207_T	225_F	0.582	0.55
244_E	312_S	0.581	0.55
159_L	217_C	0.579	0.55
378_S	414_C	0.579	0.55
173_I	180_V	0.578	0.55
363_H	425_R	0.577	0.55
350_S	379_A	0.577	0.55
88_Y	91_Y	0.576	0.54
143_D	224_Y	0.576	0.54
209_I	217_C	0.576	0.54
77_K	80_Y	0.576	0.54
59_F	190_G	0.574	0.54
374_S	387_R	0.574	0.54
280_K	317_T	0.572	0.54
426_N	434_E	0.572	0.54
321_T	489_S	0.571	0.54
83_L	86_Q	0.571	0.54
386_Y	419_F	0.570	0.54
476_L	479_A	0.570	0.54
113_T	117_A	0.569	0.54
407_S	439_R	0.568	0.53
206_G	238_T	0.567	0.53
219_M	248_V	0.567	0.53
60_R	63_A	0.566	0.53
431_L	434_E	0.566	0.53
163_G	211_V	0.566	0.53
218_P	240_L	0.565	0.53
86_Q	385_S	0.564	0.53
256_A	263_Q	0.564	0.53
117_A	481_E	0.563	0.53
320_E	347_A	0.563	0.53
233_G	375_K	0.563	0.53
460_S	487_A	0.562	0.53
144_A	148_S	0.562	0.53
407_S	437_T	0.562	0.53
399_A	426_N	0.561	0.53
373_I	470_V	0.561	0.53
301_V	318_Q	0.561	0.53
98_N	113_T	0.560	0.52
358_G	418_T	0.559	0.52
163_G	212_P	0.559	0.52
90_Y	226_R	0.559	0.52
393_M	418_T	0.558	0.52
220_E	249_S	0.556	0.52
364_I	391_K	0.556	0.52
431_L	462_I	0.556	0.52
391_K	423_E	0.553	0.51
422_V	429_A	0.553	0.51
393_M	425_R	0.553	0.51
154_T	484_K	0.553	0.51
65_R	230_E	0.553	0.51
61_L	118_F	0.553	0.51
146_F	207_T	0.553	0.51
144_A	151_V	0.552	0.51
227_I	265_H	0.552	0.51
392_I	427_N	0.552	0.51
231_K	261_S	0.551	0.51
216_R	367_N	0.550	0.51
436_T	467_C	0.550	0.51
285_Q	320_E	0.550	0.51
448_C	489_S	0.549	0.51
67_W	71_E	0.549	0.51
160_A	163_G	0.548	0.51
467_C	470_V	0.548	0.51
454_S	464_N	0.548	0.51
392_I	426_N	0.548	0.51
253_G	286_N	0.547	0.51
353_Q	380_G	0.546	0.51
339_S	364_I	0.546	0.51
409_L	416_A	0.546	0.51
262_Y	351_G	0.546	0.51
64_Y	171_E	0.545	0.50
96_C	298_L	0.544	0.50
369_K	432_E	0.543	0.50
364_I	395_T	0.543	0.50
250_Y	269_V	0.542	0.50
316_W	435_A	0.542	0.50
414_C	448_C	0.541	0.50
276_N	313_K	0.541	0.50
407_S	419_F	0.541	0.50
348_L	379_A	0.540	0.50
63_A	66_A	0.540	0.50
133_P	202_V	0.538	0.50
348_L	489_S	0.537	0.49
203_A	266_A	0.537	0.49
153_T	156_R	0.536	0.49
120_S	124_E	0.536	0.49
363_H	423_E	0.535	0.49
169_F	203_A	0.534	0.49
133_P	219_M	0.534	0.49
269_V	317_T	0.534	0.49
383_Q	414_C	0.533	0.49
56_M	169_F	0.531	0.49
372_I	403_T	0.530	0.49
201_A	277_A	0.530	0.49
436_T	469_D	0.529	0.48
67_W	197_A	0.528	0.48
162_Q	211_V	0.528	0.48
387_R	418_T	0.528	0.48
453_I	457_D	0.528	0.48
235_F	264_L	0.527	0.48
327_W	354_Q	0.527	0.48
315_S	475_P	0.526	0.48
334_L	465_G	0.526	0.48
347_A	357_T	0.526	0.48
97_G	113_T	0.526	0.48
241_V	270_E	0.526	0.48
198_L	235_F	0.525	0.48
247_Y	280_K	0.524	0.48
401_N	422_V	0.523	0.48
237_R	438_S	0.522	0.48
371_T	392_I	0.522	0.48
300_F	318_Q	0.521	0.47
214_G	364_I	0.521	0.47
409_L	419_F	0.520	0.47
199_N	462_I	0.520	0.47
258_V	445_L	0.518	0.47
128_E	131_G	0.515	0.47
83_L	422_V	0.515	0.47
357_T	378_S	0.515	0.47
85_Y	415_G	0.514	0.46
315_S	342_E	0.514	0.46
286_N	485_L	0.514	0.46
265_H	299_N	0.514	0.46
372_I	421_Y	0.513	0.46
141_A	159_L	0.513	0.46
448_C	461_M	0.512	0.46
133_P	352_H	0.512	0.46
187_V	270_E	0.512	0.46
147_D	152_A	0.512	0.46
164_I	221_L	0.511	0.46
441_G	444_Q	0.511	0.46
303_K	328_K	0.511	0.46
468_K	471_F	0.510	0.46
167_C	176_H	0.510	0.46
415_G	486_L	0.509	0.46
384_N	392_I	0.509	0.46
417_H	437_T	0.509	0.46
401_N	444_Q	0.509	0.46
245_D	278_E	0.508	0.46
260_D	296_G	0.507	0.46
92_S	371_T	0.507	0.46
374_S	405_C	0.507	0.46
384_N	459_I	0.507	0.46
146_F	205_D	0.505	0.45
300_F	304_R	0.505	0.45
347_A	439_R	0.504	0.45
88_Y	356_D	0.504	0.45
129_Q	133_P	0.504	0.45
230_E	261_S	0.504	0.45
321_T	471_F	0.504	0.45
119_L	124_E	0.504	0.45
116_N	119_L	0.504	0.45
145_I	156_R	0.503	0.45
85_Y	199_N	0.503	0.45
467_C	490_L	0.502	0.45
457_D	460_S	0.502	0.45
298_L	324_A	0.502	0.45
89_S	383_Q	0.501	0.45
207_T	238_T	0.501	0.45
330_P	333_I	0.500	0.45
305_A	440_I	0.500	0.45
318_Q	357_T	0.500	0.45
419_F	427_N	0.500	0.45

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1vh4A	2	0.8263	100	0.279	Contact Map
4dn7A	2	0.8182	100	0.312	Contact Map
4xfmA	2	0.1434	63.2	0.971	Contact Map
3dqqA	2	0.1535	32.4	0.976	Contact Map
1yzyA	1	0.1394	24.6	0.978	Contact Map
4v0qA	2	0.1192	22.4	0.978	Contact Map
4k6mA	2	0.1212	20.2	0.979	Contact Map
1ifyA	1	0.0869	18.6	0.979	Contact Map
4xg0A	2	0.1475	18.3	0.979	Contact Map
1wjiA	1	0.1131	17.8	0.979	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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