YBBP - ECOLI - GREMLIN Contacts

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YBBP - Uncharacterized ABC transporter permease YbbP

UniProt:	P77504	Sequences: MIARWFWREWRSPSLLIVWLALSLAVACVLALGNISDRMEKGLSQQSREFMAGDRALRSSREVPQAWLEEAQKRGLKVGKQLTFATMTFAGDTPQLANVKAVDDIYPMYGDLQTNPPGLKPQAGSVLLAPRLMALLNLKTGDTIDVGDATLRIAGEVIQEPDSGFNPFQMAPRLMMNLADVDKTGAVQPGSRVTWRYKFGGNENQLDGYEKWLLPQLKPEQRWYGLEQDEGALGRSMERSQQFLLLSALLTLLLAVAAVAVAMNHYCRSRYDLVAILKTLGAGRAQLRKLIVGQWLMVLTLSAVTGGAIGLLFENVLMVLLKPVLPAALPPASLWPWLWALGTMTVISLLVGLRPYRLLLATQPLRVLRNDVVANVWPLKFYLPIVSVVVVLLLAGLMGGSMLLWAVLAGAVVLALLCGVLGWMLLNVLRRMTLKSLPLRLAVSRLLRQPWSTLSQLSAFSLSFMLLALLLVLRGDLLDRWQQQLPPESPNYFLINIATEQVAPLKAFLAEHQIVPESFYPVVRARLTAINDKPTEGNEDEALNRELNLTWQNTRPDHNPIVAGNWPPKADEVSMEEGLAKRLNVALGDTVTFMGDTQEFRAKVTSLRKVDWESLRPNFYFIFPEGALDGQPQSWLTSFRWENGNGMLTQLNRQFPTISLLDIGAILKQVGQVLEQVSRALEVMVVLVTACGMLLLLAQVQVGMRQRHQELVVWRTLGAGKKLLRTTLWCEFAMLGFVSGLVAAIGAETALAVLQAKVFDFPWEPDWRLWIVLPCSGALLLSLFGGWLGARLVKGKALFRQFAG	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG13263
Length:	804 (639)
Sequences:	1309 (1038)
Seq/√Len:	41.1

ECOLI - YBBP

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
585_V	604_V	5.757	1.00
126_V	176_M	5.557	1.00
580_A	607_L	5.373	1.00
84_F	87_M	5.332	1.00
128_L	133_M	5.226	1.00
107_P	110_G	5.222	1.00
128_L	174_L	4.314	1.00
9_E	13_P	4.141	1.00
590_T	601_R	3.988	1.00
30_L	340_A	3.909	1.00
82_L	85_A	3.839	1.00
424_M	428_V	3.773	1.00
133_M	153_I	3.717	1.00
592_T	601_R	3.663	1.00
143_T	150_T	3.544	1.00
393_L	397_L	3.511	1.00
79_G	87_M	3.358	1.00
560_P	609_K	3.286	1.00
626_G	629_D	3.283	1.00
128_L	153_I	3.251	1.00
149_A	183_K	3.250	1.00
70_E	74_R	3.183	1.00
577_E	609_K	3.169	1.00
285_A	289_K	3.134	1.00
389_V	393_L	3.129	1.00
575_M	607_L	3.098	1.00
587_L	607_L	3.022	1.00
427_N	431_R	3.020	1.00
77_K	85_A	3.014	1.00
494_L	505_L	2.987	1.00
138_L	153_I	2.809	1.00
100_K	160_E	2.793	1.00
65_Q	69_E	2.773	1.00
550_T	622_I	2.756	1.00
576_E	610_V	2.690	1.00
390_V	394_L	2.660	1.00
126_V	174_L	2.630	1.00
82_L	87_M	2.613	1.00
573_V	621_F	2.572	1.00
555_R	561_I	2.567	1.00
70_E	73_K	2.544	1.00
133_M	156_E	2.533	1.00
6_F	13_P	2.528	1.00
577_E	581_K	2.520	1.00
125_S	154_A	2.514	1.00
130_P	156_E	2.504	1.00
79_G	103_D	2.489	1.00
87_M	90_A	2.488	1.00
160_E	173_R	2.476	1.00
76_L	87_M	2.473	1.00
202_N	205_Q	2.472	1.00
573_V	602_A	2.439	1.00
143_T	152_R	2.437	1.00
9_E	12_S	2.410	1.00
128_L	144_I	2.403	1.00
148_D	185_G	2.399	1.00
562_V	607_L	2.333	1.00
192_R	197_Y	2.326	1.00
587_L	606_S	2.308	1.00
23_S	305_T	2.247	1.00
6_F	10_W	2.225	1.00
386_V	393_L	2.222	1.00
6_F	12_S	2.209	1.00
529_A	592_T	2.191	1.00
617_P	620_Y	2.184	0.99
563_A	607_L	2.177	0.99
126_V	144_I	2.169	0.99
77_K	84_F	2.160	0.99
79_G	84_F	2.158	0.99
209_Y	212_W	2.146	0.99
587_L	605_T	2.140	0.99
30_L	310_G	2.138	0.99
390_V	393_L	2.128	0.99
79_G	86_T	2.124	0.99
84_F	99_V	2.115	0.99
395_A	398_M	2.109	0.99
82_L	86_T	2.078	0.99
192_R	195_W	2.050	0.99
391_V	394_L	2.048	0.99
575_M	585_V	2.043	0.99
19_W	302_S	2.006	0.99
122_Q	125_S	1.992	0.99
68_L	80_K	1.992	0.99
10_W	13_P	1.944	0.99
612_W	618_N	1.935	0.99
84_F	88_T	1.923	0.99
574_S	606_S	1.923	0.99
86_T	90_A	1.916	0.99
393_L	398_M	1.916	0.99
113_Q	116_P	1.905	0.99
81_Q	84_F	1.896	0.99
178_L	182_D	1.892	0.99
83_T	86_T	1.883	0.98
83_T	87_M	1.876	0.98
84_F	90_A	1.875	0.98
79_G	85_A	1.868	0.98
84_F	89_F	1.866	0.98
502_V	506_K	1.864	0.98
6_F	9_E	1.863	0.98
615_L	618_N	1.861	0.98
127_L	155_G	1.852	0.98
121_P	124_G	1.850	0.98
69_E	72_Q	1.831	0.98
212_W	216_Q	1.803	0.98
68_L	72_Q	1.789	0.98
4_R	13_P	1.785	0.98
538_N	541_E	1.762	0.98
81_Q	85_A	1.757	0.98
527_L	591_V	1.718	0.97
420_V	424_M	1.670	0.97
404_L	407_V	1.666	0.97
391_V	395_A	1.664	0.97
608_R	612_W	1.656	0.97
76_L	84_F	1.653	0.96
522_V	550_T	1.641	0.96
243_F	470_L	1.634	0.96
207_D	210_E	1.619	0.96
130_P	134_A	1.585	0.96
590_T	603_K	1.584	0.95
461_S	567_P	1.579	0.95
306_G	310_G	1.569	0.95
116_P	120_K	1.567	0.95
146_V	174_L	1.554	0.95
85_A	90_A	1.542	0.95
386_V	389_V	1.526	0.94
506_K	510_A	1.524	0.94
272_D	370_N	1.517	0.94
440_R	448_R	1.515	0.94
77_K	82_L	1.511	0.94
116_P	119_L	1.510	0.94
145_D	150_T	1.509	0.94
279_T	442_A	1.499	0.94
401_S	404_L	1.497	0.94
272_D	366_R	1.497	0.94
572_E	603_K	1.491	0.94
97_A	174_L	1.480	0.94
628_L	631_Q	1.478	0.93
442_A	466_L	1.475	0.93
575_M	579_L	1.470	0.93
106_Y	162_D	1.464	0.93
146_V	151_L	1.459	0.93
619_F	623_F	1.459	0.93
151_L	176_M	1.452	0.93
151_L	180_D	1.448	0.93
27_A	310_G	1.442	0.93
542_A	547_L	1.440	0.93
106_Y	110_G	1.438	0.92
619_F	622_I	1.437	0.92
176_M	184_T	1.434	0.92
380_K	384_P	1.432	0.92
411_A	418_C	1.426	0.92
312_L	316_V	1.424	0.92
210_E	214_L	1.423	0.92
9_E	15_L	1.416	0.92
76_L	86_T	1.408	0.92
10_W	607_L	1.404	0.92
80_K	85_A	1.384	0.91
112_L	157_V	1.378	0.91
529_A	532_D	1.376	0.91
507_A	511_E	1.371	0.91
615_L	620_Y	1.371	0.91
16_L	607_L	1.362	0.90
201_G	209_Y	1.358	0.90
259_V	462_L	1.358	0.90
380_K	395_A	1.358	0.90
124_G	180_D	1.355	0.90
303_A	344_M	1.345	0.90
529_A	599_E	1.339	0.90
273_L	277_L	1.330	0.89
133_M	140_T	1.321	0.89
390_V	395_A	1.319	0.89
308_A	312_L	1.315	0.89
585_V	607_L	1.298	0.88
387_S	397_L	1.298	0.88
85_A	89_F	1.293	0.88
79_G	83_T	1.292	0.88
128_L	132_L	1.291	0.88
80_K	87_M	1.290	0.88
139_K	603_K	1.289	0.88
386_V	390_V	1.284	0.87
207_D	211_K	1.283	0.87
618_N	623_F	1.279	0.87
404_L	422_G	1.274	0.87
100_K	173_R	1.269	0.87
404_L	415_A	1.266	0.87
524_R	548_N	1.264	0.87
46_Q	49_E	1.262	0.86
28_C	32_L	1.260	0.86
278_K	615_L	1.249	0.86
55_R	210_E	1.247	0.86
615_L	619_F	1.243	0.86
387_S	395_A	1.242	0.86
304_V	586_A	1.237	0.85
187_V	193_V	1.235	0.85
192_R	196_R	1.223	0.85
57_L	213_L	1.222	0.85
67_W	71_A	1.215	0.84
77_K	87_M	1.210	0.84
55_R	317_L	1.207	0.84
571_D	603_K	1.198	0.83
418_C	430_R	1.197	0.83
419_G	422_G	1.194	0.83
383_L	387_S	1.193	0.83
69_E	388_V	1.187	0.83
217_L	221_Q	1.179	0.82
151_L	183_K	1.179	0.82
61_R	67_W	1.177	0.82
43_L	256_V	1.175	0.82
102_V	106_Y	1.174	0.82
256_V	351_V	1.173	0.82
25_A	255_A	1.166	0.82
193_V	197_Y	1.161	0.81
531_N	589_D	1.161	0.81
80_K	84_F	1.158	0.81
151_L	184_T	1.154	0.81
303_A	341_L	1.153	0.81
25_A	252_L	1.134	0.80
139_K	142_D	1.128	0.80
79_G	88_T	1.123	0.79
586_A	609_K	1.119	0.79
292_V	342_G	1.118	0.79
384_P	398_M	1.117	0.79
542_A	579_L	1.117	0.79
617_P	623_F	1.113	0.79
248_A	470_L	1.111	0.79
16_L	52_A	1.111	0.79
137_N	412_V	1.102	0.78
71_A	209_Y	1.101	0.78
67_W	70_E	1.101	0.78
618_N	622_I	1.098	0.78
202_N	304_V	1.095	0.77
279_T	466_L	1.091	0.77
140_T	153_I	1.090	0.77
503_A	507_A	1.089	0.77
264_N	268_R	1.089	0.77
382_Y	390_V	1.085	0.77
251_T	463_S	1.084	0.77
424_M	427_N	1.083	0.77
386_V	394_L	1.081	0.77
32_L	467_L	1.075	0.76
79_G	82_L	1.070	0.76
203_E	206_L	1.068	0.76
33_G	336_P	1.068	0.76
10_W	15_L	1.064	0.75
5_W	9_E	1.064	0.75
85_A	88_T	1.062	0.75
537_G	540_D	1.060	0.75
495_I	636_L	1.059	0.75
594_M	599_E	1.056	0.75
120_K	388_V	1.056	0.75
284_R	360_L	1.050	0.74
394_L	397_L	1.047	0.74
334_L	338_L	1.047	0.74
114_T	117_P	1.046	0.74
171_A	469_L	1.045	0.74
401_S	419_G	1.042	0.74
192_R	200_G	1.038	0.74
77_K	86_T	1.036	0.73
28_C	463_S	1.035	0.73
5_W	10_W	1.034	0.73
390_V	396_G	1.033	0.73
81_Q	86_T	1.033	0.73
416_L	421_L	1.032	0.73
112_L	509_L	1.026	0.73
391_V	398_M	1.026	0.73
405_W	409_A	1.025	0.73
82_L	181_V	1.023	0.72
344_M	362_T	1.022	0.72
157_V	175_M	1.019	0.72
608_R	618_N	1.018	0.72
572_E	605_T	1.013	0.72
616_R	620_Y	1.012	0.72
117_P	120_K	1.010	0.72
71_A	212_W	1.007	0.71
405_W	408_L	1.002	0.71
620_Y	623_F	1.002	0.71
211_K	304_V	1.000	0.71
573_V	623_F	0.998	0.71
592_T	599_E	0.997	0.71
294_Q	446_L	0.996	0.70
160_E	163_S	0.996	0.70
407_V	422_G	0.995	0.70
536_E	539_E	0.993	0.70
184_T	187_V	0.992	0.70
389_V	394_L	0.992	0.70
526_R	612_W	0.986	0.70
487_P	569_K	0.984	0.70
382_Y	386_V	0.984	0.70
595_G	631_Q	0.982	0.69
52_A	278_K	0.981	0.69
117_P	353_L	0.981	0.69
349_L	624_P	0.978	0.69
380_K	393_L	0.977	0.69
563_A	586_A	0.976	0.69
193_V	196_R	0.974	0.69
70_E	212_W	0.970	0.68
394_L	398_M	0.969	0.68
386_V	397_L	0.968	0.68
299_L	404_L	0.968	0.68
574_S	608_R	0.967	0.68
20_L	561_I	0.966	0.68
192_R	198_K	0.963	0.68
20_L	429_L	0.963	0.68
208_G	211_K	0.963	0.68
186_A	498_A	0.959	0.68
55_R	223_W	0.958	0.67
270_R	294_Q	0.957	0.67
546_E	550_T	0.955	0.67
379_L	383_L	0.955	0.67
148_D	184_T	0.955	0.67
387_S	394_L	0.952	0.67
386_V	398_M	0.950	0.67
636_L	639_F	0.949	0.67
401_S	405_W	0.949	0.67
378_P	382_Y	0.949	0.67
586_A	607_L	0.944	0.66
575_M	590_T	0.943	0.66
159_Q	591_V	0.942	0.66
380_K	396_G	0.941	0.66
532_D	590_T	0.941	0.66
132_L	174_L	0.939	0.66
64_P	67_W	0.938	0.66
184_T	188_Q	0.937	0.66
208_G	409_A	0.935	0.66
260_A	362_T	0.934	0.65
545_R	548_N	0.934	0.65
467_L	471_L	0.926	0.65
498_A	501_Q	0.926	0.65
379_L	398_M	0.922	0.64
381_F	398_M	0.921	0.64
270_R	459_A	0.920	0.64
377_W	395_A	0.920	0.64
382_Y	393_L	0.919	0.64
208_G	304_V	0.917	0.64
352_G	355_P	0.914	0.64
400_G	403_L	0.911	0.63
95_Q	135_L	0.906	0.63
366_R	371_D	0.904	0.63
427_N	430_R	0.903	0.63
383_L	398_M	0.903	0.63
106_Y	112_L	0.903	0.63
614_S	618_N	0.902	0.63
490_P	608_R	0.900	0.63
573_V	604_V	0.900	0.63
19_W	349_L	0.896	0.62
80_K	86_T	0.895	0.62
188_Q	193_V	0.894	0.62
380_K	386_V	0.894	0.62
125_S	152_R	0.891	0.62
635_W	639_F	0.890	0.62
349_L	483_Q	0.889	0.62
399_G	404_L	0.888	0.61
333_S	336_P	0.887	0.61
76_L	82_L	0.884	0.61
114_T	155_G	0.884	0.61
83_T	90_A	0.884	0.61
418_C	422_G	0.884	0.61
105_I	175_M	0.883	0.61
144_I	211_K	0.882	0.61
390_V	397_L	0.880	0.61
315_N	319_V	0.877	0.61
157_V	298_V	0.875	0.60
387_S	390_V	0.873	0.60
76_L	85_A	0.872	0.60
416_L	420_V	0.870	0.60
71_A	76_L	0.867	0.60
50_F	186_A	0.864	0.59
299_L	352_G	0.863	0.59
53_G	198_K	0.862	0.59
385_I	392_L	0.860	0.59
379_L	393_L	0.858	0.59
122_Q	154_A	0.858	0.59
193_V	198_K	0.858	0.59
182_D	500_E	0.855	0.59
43_L	237_M	0.851	0.58
83_T	88_T	0.851	0.58
278_K	466_L	0.850	0.58
205_Q	208_G	0.849	0.58
80_K	83_T	0.844	0.58
149_A	182_D	0.842	0.57
266_Y	294_Q	0.842	0.57
554_T	557_D	0.842	0.57
86_T	97_A	0.842	0.57
508_F	511_E	0.840	0.57
9_E	32_L	0.839	0.57
580_A	585_V	0.839	0.57
201_G	206_L	0.838	0.57
260_A	351_V	0.838	0.57
388_V	409_A	0.838	0.57
86_T	99_V	0.837	0.57
202_N	209_Y	0.834	0.57
634_S	639_F	0.833	0.57
392_L	398_M	0.833	0.57
88_T	97_A	0.833	0.57
161_P	278_K	0.830	0.56
460_F	463_S	0.829	0.56
542_A	620_Y	0.828	0.56
610_V	618_N	0.826	0.56
409_A	413_V	0.825	0.56
594_M	597_T	0.824	0.56
86_T	89_F	0.822	0.56
179_A	182_D	0.818	0.55
366_R	370_N	0.818	0.55
450_P	454_L	0.818	0.55
76_L	79_G	0.818	0.55
385_I	388_V	0.817	0.55
115_N	120_K	0.816	0.55
407_V	430_R	0.815	0.55
509_L	517_E	0.815	0.55
99_V	296_L	0.813	0.55
574_S	580_A	0.813	0.55
22_L	298_V	0.812	0.55
48_R	280_L	0.810	0.54
446_L	457_L	0.808	0.54
107_P	111_D	0.808	0.54
64_P	342_G	0.806	0.54
386_V	561_I	0.806	0.54
77_K	139_K	0.804	0.54
139_K	586_A	0.804	0.54
236_S	442_A	0.802	0.54
23_S	120_K	0.802	0.54
271_Y	284_R	0.799	0.53
365_L	370_N	0.796	0.53
276_I	450_P	0.790	0.53
119_L	428_V	0.790	0.53
429_L	434_L	0.790	0.53
253_L	609_K	0.789	0.52
115_N	119_L	0.789	0.52
440_R	528_T	0.789	0.52
581_K	609_K	0.787	0.52
80_K	90_A	0.779	0.52
197_Y	200_G	0.779	0.52
580_A	604_V	0.776	0.51
406_A	421_L	0.772	0.51
299_L	348_S	0.771	0.51
195_W	198_K	0.770	0.51
19_W	33_G	0.769	0.51
201_G	205_Q	0.768	0.51
532_D	601_R	0.768	0.51
385_I	416_L	0.768	0.51
437_L	441_L	0.768	0.51
66_A	69_E	0.767	0.50
23_S	27_A	0.767	0.50
19_W	305_T	0.765	0.50
31_A	34_N	0.764	0.50
360_L	364_P	0.763	0.50
20_L	97_A	0.762	0.50
76_L	80_K	0.761	0.50
224_Y	274_V	0.761	0.50
426_L	433_T	0.761	0.50
39_M	276_I	0.760	0.50
152_R	572_E	0.760	0.50
297_M	412_V	0.760	0.50
151_L	174_L	0.758	0.50
448_R	453_T	0.757	0.50
299_L	452_S	0.757	0.50
109_Y	200_G	0.757	0.50
399_G	415_A	0.754	0.49
69_E	76_L	0.754	0.49
116_P	409_A	0.754	0.49
285_A	420_V	0.753	0.49
388_V	500_E	0.753	0.49
114_T	630_G	0.753	0.49
404_L	420_V	0.752	0.49
31_A	273_L	0.752	0.49
128_L	156_E	0.752	0.49
415_A	419_G	0.749	0.49
99_V	146_V	0.749	0.49
129_A	163_S	0.749	0.49
414_L	418_C	0.749	0.49
365_L	368_L	0.749	0.49
410_G	413_V	0.748	0.49
80_K	103_D	0.748	0.49
113_Q	159_Q	0.747	0.49
259_V	475_G	0.745	0.48
96_L	610_V	0.744	0.48
17_I	438_P	0.741	0.48
222_R	226_L	0.741	0.48
19_W	301_L	0.741	0.48
174_L	554_T	0.741	0.48
77_K	83_T	0.738	0.48
177_N	532_D	0.738	0.48
243_F	494_L	0.736	0.48
350_L	389_V	0.735	0.47
508_F	512_H	0.735	0.47
300_T	345_T	0.732	0.47
553_N	625_E	0.731	0.47
262_A	485_L	0.730	0.47
279_T	364_P	0.728	0.47
608_R	619_F	0.726	0.47
82_L	182_D	0.726	0.47
326_P	623_F	0.726	0.47
321_L	324_V	0.725	0.47
25_A	270_R	0.725	0.47
81_Q	90_A	0.723	0.46
365_L	372_V	0.723	0.46
73_K	137_N	0.723	0.46
307_G	344_M	0.722	0.46
466_L	480_R	0.721	0.46
155_G	282_A	0.720	0.46
512_H	515_V	0.720	0.46
378_P	391_V	0.719	0.46
390_V	398_M	0.719	0.46
510_A	516_P	0.718	0.46
26_V	306_G	0.717	0.46
128_L	138_L	0.717	0.46
382_Y	394_L	0.715	0.46
58_R	61_R	0.714	0.46
561_I	568_P	0.714	0.46
388_V	392_L	0.714	0.46
281_G	306_G	0.712	0.45
616_R	622_I	0.712	0.45
561_I	628_L	0.711	0.45
363_Q	605_T	0.711	0.45
46_Q	418_C	0.709	0.45
383_L	391_V	0.709	0.45
398_M	404_L	0.708	0.45
113_Q	301_L	0.708	0.45
81_Q	89_F	0.707	0.45
409_A	412_V	0.707	0.45
118_G	150_T	0.706	0.45
543_L	550_T	0.706	0.45
392_L	395_A	0.705	0.45
266_Y	348_S	0.703	0.45
22_L	320_L	0.701	0.44
379_L	390_V	0.700	0.44
240_S	261_V	0.700	0.44
527_L	545_R	0.700	0.44
113_Q	150_T	0.698	0.44
527_L	552_Q	0.696	0.44
287_L	400_G	0.695	0.44
401_S	420_V	0.695	0.44
278_K	303_A	0.694	0.44
289_K	293_G	0.692	0.44
436_S	445_R	0.692	0.44
248_A	505_L	0.691	0.43
74_R	208_G	0.691	0.43
429_L	433_T	0.691	0.43
615_L	623_F	0.691	0.43
579_L	621_F	0.690	0.43
551_W	596_D	0.689	0.43
303_A	307_G	0.686	0.43
17_I	250_L	0.685	0.43
113_Q	119_L	0.684	0.43
570_A	590_T	0.683	0.43
531_N	586_A	0.683	0.43
35_I	39_M	0.682	0.43
575_M	621_F	0.682	0.43
107_P	112_L	0.681	0.43
401_S	416_L	0.680	0.42
204_N	304_V	0.680	0.42
41_K	45_Q	0.679	0.42
19_W	23_S	0.677	0.42
346_V	389_V	0.677	0.42
62_E	182_D	0.676	0.42
379_L	394_L	0.675	0.42
5_W	145_D	0.674	0.42
565_N	590_T	0.673	0.42
83_T	89_F	0.673	0.42
377_W	382_Y	0.673	0.42
214_L	305_T	0.672	0.42
490_P	521_P	0.672	0.42
80_K	128_L	0.672	0.42
243_F	463_S	0.671	0.42
419_G	454_L	0.671	0.42
171_A	470_L	0.670	0.42
616_R	628_L	0.669	0.41
79_G	585_V	0.669	0.41
503_A	530_I	0.668	0.41
18_V	263_M	0.668	0.41
92_D	599_E	0.667	0.41
71_A	561_I	0.667	0.41
62_E	195_W	0.666	0.41
243_F	608_R	0.666	0.41
384_P	393_L	0.665	0.41
533_K	568_P	0.665	0.41
409_A	416_L	0.664	0.41
223_W	301_L	0.662	0.41
490_P	493_F	0.662	0.41
29_V	252_L	0.661	0.41
329_L	509_L	0.661	0.41
477_L	604_V	0.660	0.41
243_F	477_L	0.659	0.41
560_P	565_N	0.657	0.40
547_L	550_T	0.657	0.40
251_T	294_Q	0.656	0.40
460_F	468_A	0.656	0.40
58_R	62_E	0.655	0.40
547_L	551_W	0.655	0.40
11_R	15_L	0.655	0.40
399_G	407_V	0.653	0.40
333_S	494_L	0.653	0.40
177_N	180_D	0.653	0.40
47_S	226_L	0.652	0.40
474_R	478_L	0.651	0.40
213_L	217_L	0.651	0.40
38_R	314_E	0.651	0.40
356_Y	470_L	0.651	0.40
578_G	582_R	0.648	0.40
275_A	351_V	0.646	0.39
523_V	628_L	0.646	0.39
536_E	586_A	0.644	0.39
84_F	181_V	0.644	0.39
127_L	559_N	0.643	0.39
380_K	394_L	0.643	0.39
392_L	396_G	0.642	0.39
65_Q	70_E	0.642	0.39
346_V	409_A	0.641	0.39
305_T	590_T	0.641	0.39
355_P	573_V	0.640	0.39
224_Y	256_V	0.640	0.39
416_L	428_V	0.639	0.39
259_V	467_L	0.639	0.39
96_L	608_R	0.638	0.39
26_V	355_P	0.637	0.39
263_M	267_C	0.636	0.38
28_C	186_A	0.636	0.38
228_Q	443_V	0.635	0.38
292_V	590_T	0.635	0.38
178_L	413_V	0.634	0.38
205_Q	569_K	0.633	0.38
617_P	621_F	0.633	0.38
25_A	263_M	0.632	0.38
217_L	223_W	0.632	0.38
211_K	285_A	0.632	0.38
139_K	533_K	0.631	0.38
470_L	475_G	0.631	0.38
387_S	392_L	0.631	0.38
273_L	291_I	0.630	0.38
14_S	18_V	0.629	0.38
143_T	586_A	0.629	0.38
391_V	397_L	0.629	0.38
407_V	415_A	0.629	0.38
150_T	304_V	0.626	0.38
137_N	323_P	0.626	0.38
60_S	219_P	0.624	0.37
406_A	409_A	0.624	0.37
46_Q	253_L	0.624	0.37
261_V	267_C	0.622	0.37
101_A	181_V	0.622	0.37
116_P	155_G	0.622	0.37
408_L	412_V	0.621	0.37
120_K	334_L	0.621	0.37
222_R	430_R	0.621	0.37
95_Q	131_R	0.621	0.37
139_K	591_V	0.620	0.37
28_C	448_R	0.620	0.37
73_K	554_T	0.620	0.37
71_A	75_G	0.619	0.37
117_P	425_L	0.619	0.37
466_L	470_L	0.618	0.37
277_L	282_A	0.618	0.37
253_L	622_I	0.617	0.37
113_Q	117_P	0.616	0.37
223_W	279_T	0.616	0.37
341_L	416_L	0.615	0.37
442_A	551_W	0.615	0.37
76_L	201_G	0.614	0.37
22_L	302_S	0.614	0.37
30_L	33_G	0.614	0.37
77_K	81_Q	0.613	0.36
47_S	466_L	0.613	0.36
21_A	26_V	0.613	0.36
469_L	494_L	0.612	0.36
452_S	479_D	0.612	0.36
533_K	562_V	0.612	0.36
37_D	41_K	0.612	0.36
251_T	344_M	0.611	0.36
78_V	85_A	0.609	0.36
382_Y	397_L	0.609	0.36
26_V	33_G	0.607	0.36
300_T	320_L	0.607	0.36
265_H	270_R	0.603	0.36
58_R	63_V	0.603	0.36
307_G	337_W	0.601	0.35
309_I	416_L	0.601	0.35
245_L	261_V	0.600	0.35
380_K	560_P	0.600	0.35
114_T	313_F	0.599	0.35
67_W	209_Y	0.599	0.35
466_L	469_L	0.598	0.35
522_V	548_N	0.598	0.35
409_A	507_A	0.598	0.35
137_N	327_A	0.597	0.35
352_G	440_R	0.597	0.35
381_F	391_V	0.597	0.35
146_V	580_A	0.597	0.35
102_V	175_M	0.596	0.35
78_V	84_F	0.596	0.35
39_M	238_E	0.593	0.35
473_L	601_R	0.592	0.35
24_L	339_W	0.591	0.35
111_D	117_P	0.591	0.35
203_E	417_L	0.591	0.35
79_G	105_I	0.591	0.35
17_I	298_V	0.590	0.35
428_V	503_A	0.590	0.35
14_S	17_I	0.590	0.35
203_E	388_V	0.590	0.35
110_G	564_G	0.589	0.34
13_P	269_S	0.589	0.34
322_K	577_E	0.589	0.34
384_P	479_D	0.589	0.34
520_Y	617_P	0.588	0.34
297_M	443_V	0.588	0.34
73_K	412_V	0.588	0.34
77_K	565_N	0.587	0.34
66_A	507_A	0.586	0.34
208_G	504_P	0.586	0.34
200_G	387_S	0.586	0.34
264_N	524_R	0.586	0.34
182_D	413_V	0.585	0.34
400_G	404_L	0.585	0.34
384_P	395_A	0.585	0.34
316_V	331_P	0.585	0.34
405_W	411_A	0.585	0.34
286_Q	290_L	0.585	0.34
389_V	395_A	0.585	0.34
143_T	511_E	0.583	0.34
96_L	100_K	0.582	0.34
188_Q	259_V	0.582	0.34
502_V	562_V	0.582	0.34
43_L	46_Q	0.580	0.34
97_A	526_R	0.580	0.34
149_A	184_T	0.580	0.34
425_L	429_L	0.578	0.34
197_Y	494_L	0.578	0.34
381_F	386_V	0.577	0.33
385_I	389_V	0.577	0.33
82_L	228_Q	0.577	0.33
289_K	305_T	0.577	0.33
274_V	368_L	0.576	0.33
44_S	569_K	0.575	0.33
174_L	418_C	0.575	0.33
77_K	384_P	0.574	0.33
456_Q	474_R	0.574	0.33
383_L	386_V	0.573	0.33
310_G	348_S	0.573	0.33
248_A	325_L	0.573	0.33
259_V	418_C	0.573	0.33
542_A	546_E	0.573	0.33
616_R	619_F	0.572	0.33
367_V	456_Q	0.572	0.33
205_Q	432_M	0.572	0.33
297_M	335_W	0.572	0.33
624_P	628_L	0.571	0.33
428_V	513_Q	0.571	0.33
138_L	150_T	0.571	0.33
253_L	477_L	0.571	0.33
60_S	220_E	0.570	0.33
334_L	561_I	0.569	0.33
366_R	465_M	0.569	0.33
158_I	414_L	0.569	0.33
506_K	519_F	0.569	0.33
347_I	480_R	0.569	0.33
76_L	83_T	0.568	0.33
432_M	549_L	0.568	0.33
66_A	105_I	0.568	0.33
196_R	200_G	0.568	0.33
415_A	418_C	0.568	0.33
30_L	34_N	0.567	0.33
111_D	304_V	0.567	0.33
112_L	181_V	0.567	0.33
67_W	212_W	0.567	0.33
635_W	638_S	0.567	0.33
602_A	623_F	0.566	0.33
77_K	213_L	0.566	0.33
208_G	510_A	0.566	0.33
182_D	211_K	0.566	0.33
339_W	444_S	0.565	0.32
190_G	564_G	0.565	0.32
380_K	391_V	0.565	0.32
63_V	67_W	0.565	0.32
35_I	291_I	0.565	0.32
96_L	110_G	0.563	0.32
301_L	391_V	0.563	0.32
540_D	582_R	0.563	0.32
267_C	436_S	0.563	0.32
254_L	354_R	0.562	0.32
381_F	384_P	0.562	0.32
45_Q	321_L	0.561	0.32
151_L	206_L	0.560	0.32
24_L	602_A	0.560	0.32
286_Q	289_K	0.559	0.32
222_R	514_I	0.559	0.32
104_D	622_I	0.558	0.32
240_S	456_Q	0.558	0.32
269_S	604_V	0.557	0.32
256_V	492_Y	0.557	0.32
4_R	9_E	0.557	0.32
483_Q	495_I	0.557	0.32
416_L	422_G	0.556	0.32
573_V	591_V	0.556	0.32
153_I	421_L	0.556	0.32
127_L	154_A	0.556	0.32
41_K	308_A	0.555	0.32
140_T	373_V	0.555	0.32
511_E	573_V	0.555	0.32
440_R	453_T	0.555	0.32
408_L	419_G	0.555	0.32
363_Q	431_R	0.554	0.32
547_L	620_Y	0.554	0.32
529_A	601_R	0.553	0.31
99_V	131_R	0.553	0.31
39_M	165_F	0.553	0.31
109_Y	348_S	0.553	0.31
546_E	564_G	0.552	0.31
389_V	562_V	0.552	0.31
24_L	441_L	0.552	0.31
367_V	465_M	0.551	0.31
69_E	565_N	0.551	0.31
541_E	565_N	0.550	0.31
74_R	212_W	0.549	0.31
498_A	597_T	0.549	0.31
327_A	473_L	0.549	0.31
399_G	403_L	0.549	0.31
24_L	480_R	0.548	0.31
38_R	476_D	0.548	0.31
602_A	624_P	0.548	0.31
143_T	211_K	0.548	0.31
66_A	413_V	0.548	0.31
474_R	491_N	0.547	0.31
219_P	387_S	0.547	0.31
251_T	287_L	0.547	0.31
534_P	537_G	0.547	0.31
69_E	140_T	0.546	0.31
297_M	511_E	0.546	0.31
396_G	417_L	0.545	0.31
293_G	409_A	0.545	0.31
301_L	591_V	0.544	0.31
579_L	583_L	0.544	0.31
144_I	342_G	0.544	0.31
19_W	420_V	0.542	0.31
155_G	197_Y	0.542	0.31
194_T	197_Y	0.541	0.31
492_Y	496_N	0.541	0.31
69_E	417_L	0.540	0.30
40_E	378_P	0.539	0.30
496_N	612_W	0.539	0.30
545_R	608_R	0.539	0.30
116_P	205_Q	0.538	0.30
5_W	290_L	0.538	0.30
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436_S	444_S	0.537	0.30
77_K	208_G	0.537	0.30
57_L	157_V	0.536	0.30
419_G	433_T	0.536	0.30
387_S	398_M	0.535	0.30
6_F	528_T	0.535	0.30
186_A	597_T	0.535	0.30
581_K	586_A	0.535	0.30
315_N	523_V	0.534	0.30
312_L	388_V	0.534	0.30
21_A	258_A	0.534	0.30
77_K	417_L	0.534	0.30
39_M	50_F	0.533	0.30
301_L	515_V	0.532	0.30
199_F	206_L	0.532	0.30
160_E	175_M	0.531	0.30
205_Q	387_S	0.531	0.30
427_N	575_M	0.531	0.30
15_L	23_S	0.529	0.30
294_Q	460_F	0.529	0.30
132_L	499_T	0.529	0.30
300_T	604_V	0.528	0.30
75_G	425_L	0.528	0.30
175_M	178_L	0.528	0.30
387_S	504_P	0.528	0.30
21_A	262_A	0.527	0.29
327_A	421_L	0.526	0.29
388_V	560_P	0.526	0.29
305_T	487_P	0.526	0.29
486_P	489_S	0.526	0.29
95_Q	128_L	0.526	0.29
455_S	470_L	0.525	0.29
399_G	405_W	0.525	0.29
285_A	305_T	0.525	0.29
69_E	402_M	0.524	0.29
310_G	622_I	0.524	0.29
209_Y	213_L	0.523	0.29
290_L	495_I	0.523	0.29
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120_K	557_D	0.523	0.29
562_V	577_E	0.523	0.29
28_C	257_A	0.523	0.29
247_S	442_A	0.522	0.29
213_L	216_Q	0.522	0.29
420_V	587_L	0.521	0.29
151_L	359_L	0.521	0.29
31_A	313_F	0.521	0.29
258_A	263_M	0.521	0.29
326_P	468_A	0.520	0.29
138_L	144_I	0.520	0.29
412_V	601_R	0.519	0.29
504_P	507_A	0.519	0.29
308_A	534_P	0.519	0.29
190_G	266_Y	0.519	0.29
5_W	13_P	0.519	0.29
385_I	435_K	0.519	0.29
64_P	212_W	0.519	0.29
348_S	351_V	0.518	0.29
258_A	449_Q	0.518	0.29
268_R	505_L	0.518	0.29
120_K	152_R	0.517	0.29
50_F	278_K	0.517	0.29
444_S	450_P	0.517	0.29
376_V	428_V	0.517	0.29
314_E	365_L	0.516	0.29
258_A	456_Q	0.516	0.29
70_E	202_N	0.516	0.29
21_A	30_L	0.515	0.29
295_W	463_S	0.515	0.29
151_L	384_P	0.515	0.29
179_A	429_L	0.515	0.29
229_D	463_S	0.514	0.28
294_Q	442_A	0.514	0.28
65_Q	83_T	0.514	0.28
287_L	291_I	0.514	0.28
257_A	294_Q	0.514	0.28
415_A	422_G	0.514	0.28
345_T	375_N	0.514	0.28
362_T	367_V	0.513	0.28
146_V	316_V	0.513	0.28
384_P	388_V	0.513	0.28
558_H	567_P	0.512	0.28
27_A	410_G	0.512	0.28
441_L	445_R	0.512	0.28
162_D	351_V	0.512	0.28
111_D	507_A	0.512	0.28
341_L	557_D	0.512	0.28
246_L	589_D	0.511	0.28
77_K	80_K	0.511	0.28
97_A	301_L	0.510	0.28
550_T	617_P	0.508	0.28
28_C	266_Y	0.508	0.28
247_S	463_S	0.508	0.28
256_V	347_I	0.508	0.28
478_L	482_Q	0.507	0.28
509_L	577_E	0.507	0.28
461_S	597_T	0.507	0.28
159_Q	297_M	0.507	0.28
250_L	359_L	0.506	0.28
259_V	352_G	0.506	0.28
13_P	16_L	0.506	0.28
248_A	302_S	0.505	0.28
332_A	337_W	0.505	0.28
622_I	625_E	0.504	0.28
190_G	448_R	0.504	0.28
156_E	159_Q	0.503	0.28
244_L	291_I	0.502	0.28
14_S	269_S	0.502	0.28
481_W	496_N	0.502	0.28
138_L	181_V	0.502	0.28
390_V	567_P	0.501	0.27
133_M	634_S	0.501	0.27
531_N	610_V	0.500	0.27
536_E	540_D	0.500	0.27
157_V	639_F	0.500	0.27

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3ftjA	1	0.2301	99	0.917	Contact Map
3is6A	2	0.2475	98	0.94	Contact Map
3w9iA	3	0.4801	82.9	0.969	Contact Map
4mt1A	3	0.4876	81.6	0.969	Contact Map
4k0jA	3	0.4639	70.9	0.972	Contact Map
3ne5A	3	0.4776	69.7	0.972	Contact Map
4dx5A	3	0.4863	65.5	0.973	Contact Map
2l66A	2	0.0659	62.6	0.973	Contact Map
1yfbA	2	0.0647	60.3	0.974	Contact Map
3o27A	2	0.0721	56	0.974	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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