GREMLIN Database
YBBP - Uncharacterized ABC transporter permease YbbP
UniProt: P77504 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG13263
Length: 804 (639)
Sequences: 1309 (1038)
Seq/√Len: 41.1

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
585_V604_V5.7571.00
126_V176_M5.5571.00
580_A607_L5.3731.00
84_F87_M5.3321.00
128_L133_M5.2261.00
107_P110_G5.2221.00
128_L174_L4.3141.00
9_E13_P4.1411.00
590_T601_R3.9881.00
30_L340_A3.9091.00
82_L85_A3.8391.00
424_M428_V3.7731.00
133_M153_I3.7171.00
592_T601_R3.6631.00
143_T150_T3.5441.00
393_L397_L3.5111.00
79_G87_M3.3581.00
560_P609_K3.2861.00
626_G629_D3.2831.00
128_L153_I3.2511.00
149_A183_K3.2501.00
70_E74_R3.1831.00
577_E609_K3.1691.00
285_A289_K3.1341.00
389_V393_L3.1291.00
575_M607_L3.0981.00
587_L607_L3.0221.00
427_N431_R3.0201.00
77_K85_A3.0141.00
494_L505_L2.9871.00
138_L153_I2.8091.00
100_K160_E2.7931.00
65_Q69_E2.7731.00
550_T622_I2.7561.00
576_E610_V2.6901.00
390_V394_L2.6601.00
126_V174_L2.6301.00
82_L87_M2.6131.00
573_V621_F2.5721.00
555_R561_I2.5671.00
70_E73_K2.5441.00
133_M156_E2.5331.00
6_F13_P2.5281.00
577_E581_K2.5201.00
125_S154_A2.5141.00
130_P156_E2.5041.00
79_G103_D2.4891.00
87_M90_A2.4881.00
160_E173_R2.4761.00
76_L87_M2.4731.00
202_N205_Q2.4721.00
573_V602_A2.4391.00
143_T152_R2.4371.00
9_E12_S2.4101.00
128_L144_I2.4031.00
148_D185_G2.3991.00
562_V607_L2.3331.00
192_R197_Y2.3261.00
587_L606_S2.3081.00
23_S305_T2.2471.00
6_F10_W2.2251.00
386_V393_L2.2221.00
6_F12_S2.2091.00
529_A592_T2.1911.00
617_P620_Y2.1840.99
563_A607_L2.1770.99
126_V144_I2.1690.99
77_K84_F2.1600.99
79_G84_F2.1580.99
209_Y212_W2.1460.99
587_L605_T2.1400.99
30_L310_G2.1380.99
390_V393_L2.1280.99
79_G86_T2.1240.99
84_F99_V2.1150.99
395_A398_M2.1090.99
82_L86_T2.0780.99
192_R195_W2.0500.99
391_V394_L2.0480.99
575_M585_V2.0430.99
19_W302_S2.0060.99
122_Q125_S1.9920.99
68_L80_K1.9920.99
10_W13_P1.9440.99
612_W618_N1.9350.99
84_F88_T1.9230.99
574_S606_S1.9230.99
86_T90_A1.9160.99
393_L398_M1.9160.99
113_Q116_P1.9050.99
81_Q84_F1.8960.99
178_L182_D1.8920.99
83_T86_T1.8830.98
83_T87_M1.8760.98
84_F90_A1.8750.98
79_G85_A1.8680.98
84_F89_F1.8660.98
502_V506_K1.8640.98
6_F9_E1.8630.98
615_L618_N1.8610.98
127_L155_G1.8520.98
121_P124_G1.8500.98
69_E72_Q1.8310.98
212_W216_Q1.8030.98
68_L72_Q1.7890.98
4_R13_P1.7850.98
538_N541_E1.7620.98
81_Q85_A1.7570.98
527_L591_V1.7180.97
420_V424_M1.6700.97
404_L407_V1.6660.97
391_V395_A1.6640.97
608_R612_W1.6560.97
76_L84_F1.6530.96
522_V550_T1.6410.96
243_F470_L1.6340.96
207_D210_E1.6190.96
130_P134_A1.5850.96
590_T603_K1.5840.95
461_S567_P1.5790.95
306_G310_G1.5690.95
116_P120_K1.5670.95
146_V174_L1.5540.95
85_A90_A1.5420.95
386_V389_V1.5260.94
506_K510_A1.5240.94
272_D370_N1.5170.94
440_R448_R1.5150.94
77_K82_L1.5110.94
116_P119_L1.5100.94
145_D150_T1.5090.94
279_T442_A1.4990.94
401_S404_L1.4970.94
272_D366_R1.4970.94
572_E603_K1.4910.94
97_A174_L1.4800.94
628_L631_Q1.4780.93
442_A466_L1.4750.93
575_M579_L1.4700.93
106_Y162_D1.4640.93
146_V151_L1.4590.93
619_F623_F1.4590.93
151_L176_M1.4520.93
151_L180_D1.4480.93
27_A310_G1.4420.93
542_A547_L1.4400.93
106_Y110_G1.4380.92
619_F622_I1.4370.92
176_M184_T1.4340.92
380_K384_P1.4320.92
411_A418_C1.4260.92
312_L316_V1.4240.92
210_E214_L1.4230.92
9_E15_L1.4160.92
76_L86_T1.4080.92
10_W607_L1.4040.92
80_K85_A1.3840.91
112_L157_V1.3780.91
529_A532_D1.3760.91
507_A511_E1.3710.91
615_L620_Y1.3710.91
16_L607_L1.3620.90
201_G209_Y1.3580.90
259_V462_L1.3580.90
380_K395_A1.3580.90
124_G180_D1.3550.90
303_A344_M1.3450.90
529_A599_E1.3390.90
273_L277_L1.3300.89
133_M140_T1.3210.89
390_V395_A1.3190.89
308_A312_L1.3150.89
585_V607_L1.2980.88
387_S397_L1.2980.88
85_A89_F1.2930.88
79_G83_T1.2920.88
128_L132_L1.2910.88
80_K87_M1.2900.88
139_K603_K1.2890.88
386_V390_V1.2840.87
207_D211_K1.2830.87
618_N623_F1.2790.87
404_L422_G1.2740.87
100_K173_R1.2690.87
404_L415_A1.2660.87
524_R548_N1.2640.87
46_Q49_E1.2620.86
28_C32_L1.2600.86
278_K615_L1.2490.86
55_R210_E1.2470.86
615_L619_F1.2430.86
387_S395_A1.2420.86
304_V586_A1.2370.85
187_V193_V1.2350.85
192_R196_R1.2230.85
57_L213_L1.2220.85
67_W71_A1.2150.84
77_K87_M1.2100.84
55_R317_L1.2070.84
571_D603_K1.1980.83
418_C430_R1.1970.83
419_G422_G1.1940.83
383_L387_S1.1930.83
69_E388_V1.1870.83
217_L221_Q1.1790.82
151_L183_K1.1790.82
61_R67_W1.1770.82
43_L256_V1.1750.82
102_V106_Y1.1740.82
256_V351_V1.1730.82
25_A255_A1.1660.82
193_V197_Y1.1610.81
531_N589_D1.1610.81
80_K84_F1.1580.81
151_L184_T1.1540.81
303_A341_L1.1530.81
25_A252_L1.1340.80
139_K142_D1.1280.80
79_G88_T1.1230.79
586_A609_K1.1190.79
292_V342_G1.1180.79
384_P398_M1.1170.79
542_A579_L1.1170.79
617_P623_F1.1130.79
248_A470_L1.1110.79
16_L52_A1.1110.79
137_N412_V1.1020.78
71_A209_Y1.1010.78
67_W70_E1.1010.78
618_N622_I1.0980.78
202_N304_V1.0950.77
279_T466_L1.0910.77
140_T153_I1.0900.77
503_A507_A1.0890.77
264_N268_R1.0890.77
382_Y390_V1.0850.77
251_T463_S1.0840.77
424_M427_N1.0830.77
386_V394_L1.0810.77
32_L467_L1.0750.76
79_G82_L1.0700.76
203_E206_L1.0680.76
33_G336_P1.0680.76
10_W15_L1.0640.75
5_W9_E1.0640.75
85_A88_T1.0620.75
537_G540_D1.0600.75
495_I636_L1.0590.75
594_M599_E1.0560.75
120_K388_V1.0560.75
284_R360_L1.0500.74
394_L397_L1.0470.74
334_L338_L1.0470.74
114_T117_P1.0460.74
171_A469_L1.0450.74
401_S419_G1.0420.74
192_R200_G1.0380.74
77_K86_T1.0360.73
28_C463_S1.0350.73
5_W10_W1.0340.73
390_V396_G1.0330.73
81_Q86_T1.0330.73
416_L421_L1.0320.73
112_L509_L1.0260.73
391_V398_M1.0260.73
405_W409_A1.0250.73
82_L181_V1.0230.72
344_M362_T1.0220.72
157_V175_M1.0190.72
608_R618_N1.0180.72
572_E605_T1.0130.72
616_R620_Y1.0120.72
117_P120_K1.0100.72
71_A212_W1.0070.71
405_W408_L1.0020.71
620_Y623_F1.0020.71
211_K304_V1.0000.71
573_V623_F0.9980.71
592_T599_E0.9970.71
294_Q446_L0.9960.70
160_E163_S0.9960.70
407_V422_G0.9950.70
536_E539_E0.9930.70
184_T187_V0.9920.70
389_V394_L0.9920.70
526_R612_W0.9860.70
487_P569_K0.9840.70
382_Y386_V0.9840.70
595_G631_Q0.9820.69
52_A278_K0.9810.69
117_P353_L0.9810.69
349_L624_P0.9780.69
380_K393_L0.9770.69
563_A586_A0.9760.69
193_V196_R0.9740.69
70_E212_W0.9700.68
394_L398_M0.9690.68
386_V397_L0.9680.68
299_L404_L0.9680.68
574_S608_R0.9670.68
20_L561_I0.9660.68
192_R198_K0.9630.68
20_L429_L0.9630.68
208_G211_K0.9630.68
186_A498_A0.9590.68
55_R223_W0.9580.67
270_R294_Q0.9570.67
546_E550_T0.9550.67
379_L383_L0.9550.67
148_D184_T0.9550.67
387_S394_L0.9520.67
386_V398_M0.9500.67
636_L639_F0.9490.67
401_S405_W0.9490.67
378_P382_Y0.9490.67
586_A607_L0.9440.66
575_M590_T0.9430.66
159_Q591_V0.9420.66
380_K396_G0.9410.66
532_D590_T0.9410.66
132_L174_L0.9390.66
64_P67_W0.9380.66
184_T188_Q0.9370.66
208_G409_A0.9350.66
260_A362_T0.9340.65
545_R548_N0.9340.65
467_L471_L0.9260.65
498_A501_Q0.9260.65
379_L398_M0.9220.64
381_F398_M0.9210.64
270_R459_A0.9200.64
377_W395_A0.9200.64
382_Y393_L0.9190.64
208_G304_V0.9170.64
352_G355_P0.9140.64
400_G403_L0.9110.63
95_Q135_L0.9060.63
366_R371_D0.9040.63
427_N430_R0.9030.63
383_L398_M0.9030.63
106_Y112_L0.9030.63
614_S618_N0.9020.63
490_P608_R0.9000.63
573_V604_V0.9000.63
19_W349_L0.8960.62
80_K86_T0.8950.62
188_Q193_V0.8940.62
380_K386_V0.8940.62
125_S152_R0.8910.62
635_W639_F0.8900.62
349_L483_Q0.8890.62
399_G404_L0.8880.61
333_S336_P0.8870.61
76_L82_L0.8840.61
114_T155_G0.8840.61
83_T90_A0.8840.61
418_C422_G0.8840.61
105_I175_M0.8830.61
144_I211_K0.8820.61
390_V397_L0.8800.61
315_N319_V0.8770.61
157_V298_V0.8750.60
387_S390_V0.8730.60
76_L85_A0.8720.60
416_L420_V0.8700.60
71_A76_L0.8670.60
50_F186_A0.8640.59
299_L352_G0.8630.59
53_G198_K0.8620.59
385_I392_L0.8600.59
379_L393_L0.8580.59
122_Q154_A0.8580.59
193_V198_K0.8580.59
182_D500_E0.8550.59
43_L237_M0.8510.58
83_T88_T0.8510.58
278_K466_L0.8500.58
205_Q208_G0.8490.58
80_K83_T0.8440.58
149_A182_D0.8420.57
266_Y294_Q0.8420.57
554_T557_D0.8420.57
86_T97_A0.8420.57
508_F511_E0.8400.57
9_E32_L0.8390.57
580_A585_V0.8390.57
201_G206_L0.8380.57
260_A351_V0.8380.57
388_V409_A0.8380.57
86_T99_V0.8370.57
202_N209_Y0.8340.57
634_S639_F0.8330.57
392_L398_M0.8330.57
88_T97_A0.8330.57
161_P278_K0.8300.56
460_F463_S0.8290.56
542_A620_Y0.8280.56
610_V618_N0.8260.56
409_A413_V0.8250.56
594_M597_T0.8240.56
86_T89_F0.8220.56
179_A182_D0.8180.55
366_R370_N0.8180.55
450_P454_L0.8180.55
76_L79_G0.8180.55
385_I388_V0.8170.55
115_N120_K0.8160.55
407_V430_R0.8150.55
509_L517_E0.8150.55
99_V296_L0.8130.55
574_S580_A0.8130.55
22_L298_V0.8120.55
48_R280_L0.8100.54
446_L457_L0.8080.54
107_P111_D0.8080.54
64_P342_G0.8060.54
386_V561_I0.8060.54
77_K139_K0.8040.54
139_K586_A0.8040.54
236_S442_A0.8020.54
23_S120_K0.8020.54
271_Y284_R0.7990.53
365_L370_N0.7960.53
276_I450_P0.7900.53
119_L428_V0.7900.53
429_L434_L0.7900.53
253_L609_K0.7890.52
115_N119_L0.7890.52
440_R528_T0.7890.52
581_K609_K0.7870.52
80_K90_A0.7790.52
197_Y200_G0.7790.52
580_A604_V0.7760.51
406_A421_L0.7720.51
299_L348_S0.7710.51
195_W198_K0.7700.51
19_W33_G0.7690.51
201_G205_Q0.7680.51
532_D601_R0.7680.51
385_I416_L0.7680.51
437_L441_L0.7680.51
66_A69_E0.7670.50
23_S27_A0.7670.50
19_W305_T0.7650.50
31_A34_N0.7640.50
360_L364_P0.7630.50
20_L97_A0.7620.50
76_L80_K0.7610.50
224_Y274_V0.7610.50
426_L433_T0.7610.50
39_M276_I0.7600.50
152_R572_E0.7600.50
297_M412_V0.7600.50
151_L174_L0.7580.50
448_R453_T0.7570.50
299_L452_S0.7570.50
109_Y200_G0.7570.50
399_G415_A0.7540.49
69_E76_L0.7540.49
116_P409_A0.7540.49
285_A420_V0.7530.49
388_V500_E0.7530.49
114_T630_G0.7530.49
404_L420_V0.7520.49
31_A273_L0.7520.49
128_L156_E0.7520.49
415_A419_G0.7490.49
99_V146_V0.7490.49
129_A163_S0.7490.49
414_L418_C0.7490.49
365_L368_L0.7490.49
410_G413_V0.7480.49
80_K103_D0.7480.49
113_Q159_Q0.7470.49
259_V475_G0.7450.48
96_L610_V0.7440.48
17_I438_P0.7410.48
222_R226_L0.7410.48
19_W301_L0.7410.48
174_L554_T0.7410.48
77_K83_T0.7380.48
177_N532_D0.7380.48
243_F494_L0.7360.48
350_L389_V0.7350.47
508_F512_H0.7350.47
300_T345_T0.7320.47
553_N625_E0.7310.47
262_A485_L0.7300.47
279_T364_P0.7280.47
608_R619_F0.7260.47
82_L182_D0.7260.47
326_P623_F0.7260.47
321_L324_V0.7250.47
25_A270_R0.7250.47
81_Q90_A0.7230.46
365_L372_V0.7230.46
73_K137_N0.7230.46
307_G344_M0.7220.46
466_L480_R0.7210.46
155_G282_A0.7200.46
512_H515_V0.7200.46
378_P391_V0.7190.46
390_V398_M0.7190.46
510_A516_P0.7180.46
26_V306_G0.7170.46
128_L138_L0.7170.46
382_Y394_L0.7150.46
58_R61_R0.7140.46
561_I568_P0.7140.46
388_V392_L0.7140.46
281_G306_G0.7120.45
616_R622_I0.7120.45
561_I628_L0.7110.45
363_Q605_T0.7110.45
46_Q418_C0.7090.45
383_L391_V0.7090.45
398_M404_L0.7080.45
113_Q301_L0.7080.45
81_Q89_F0.7070.45
409_A412_V0.7070.45
118_G150_T0.7060.45
543_L550_T0.7060.45
392_L395_A0.7050.45
266_Y348_S0.7030.45
22_L320_L0.7010.44
379_L390_V0.7000.44
240_S261_V0.7000.44
527_L545_R0.7000.44
113_Q150_T0.6980.44
527_L552_Q0.6960.44
287_L400_G0.6950.44
401_S420_V0.6950.44
278_K303_A0.6940.44
289_K293_G0.6920.44
436_S445_R0.6920.44
248_A505_L0.6910.43
74_R208_G0.6910.43
429_L433_T0.6910.43
615_L623_F0.6910.43
579_L621_F0.6900.43
551_W596_D0.6890.43
303_A307_G0.6860.43
17_I250_L0.6850.43
113_Q119_L0.6840.43
570_A590_T0.6830.43
531_N586_A0.6830.43
35_I39_M0.6820.43
575_M621_F0.6820.43
107_P112_L0.6810.43
401_S416_L0.6800.42
204_N304_V0.6800.42
41_K45_Q0.6790.42
19_W23_S0.6770.42
346_V389_V0.6770.42
62_E182_D0.6760.42
379_L394_L0.6750.42
5_W145_D0.6740.42
565_N590_T0.6730.42
83_T89_F0.6730.42
377_W382_Y0.6730.42
214_L305_T0.6720.42
490_P521_P0.6720.42
80_K128_L0.6720.42
243_F463_S0.6710.42
419_G454_L0.6710.42
171_A470_L0.6700.42
616_R628_L0.6690.41
79_G585_V0.6690.41
503_A530_I0.6680.41
18_V263_M0.6680.41
92_D599_E0.6670.41
71_A561_I0.6670.41
62_E195_W0.6660.41
243_F608_R0.6660.41
384_P393_L0.6650.41
533_K568_P0.6650.41
409_A416_L0.6640.41
223_W301_L0.6620.41
490_P493_F0.6620.41
29_V252_L0.6610.41
329_L509_L0.6610.41
477_L604_V0.6600.41
243_F477_L0.6590.41
560_P565_N0.6570.40
547_L550_T0.6570.40
251_T294_Q0.6560.40
460_F468_A0.6560.40
58_R62_E0.6550.40
547_L551_W0.6550.40
11_R15_L0.6550.40
399_G407_V0.6530.40
333_S494_L0.6530.40
177_N180_D0.6530.40
47_S226_L0.6520.40
474_R478_L0.6510.40
213_L217_L0.6510.40
38_R314_E0.6510.40
356_Y470_L0.6510.40
578_G582_R0.6480.40
275_A351_V0.6460.39
523_V628_L0.6460.39
536_E586_A0.6440.39
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380_K394_L0.6430.39
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28_C186_A0.6360.38
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292_V590_T0.6350.38
178_L413_V0.6340.38
205_Q569_K0.6330.38
617_P621_F0.6330.38
25_A263_M0.6320.38
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470_L475_G0.6310.38
387_S392_L0.6310.38
273_L291_I0.6300.38
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391_V397_L0.6290.38
407_V415_A0.6290.38
150_T304_V0.6260.38
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261_V267_C0.6220.37
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71_A75_G0.6190.37
117_P425_L0.6190.37
466_L470_L0.6180.37
277_L282_A0.6180.37
253_L622_I0.6170.37
113_Q117_P0.6160.37
223_W279_T0.6160.37
341_L416_L0.6150.37
442_A551_W0.6150.37
76_L201_G0.6140.37
22_L302_S0.6140.37
30_L33_G0.6140.37
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452_S479_D0.6120.36
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382_Y397_L0.6090.36
26_V33_G0.6070.36
300_T320_L0.6070.36
265_H270_R0.6030.36
58_R63_V0.6030.36
307_G337_W0.6010.35
309_I416_L0.6010.35
245_L261_V0.6000.35
380_K560_P0.6000.35
114_T313_F0.5990.35
67_W209_Y0.5990.35
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522_V548_N0.5980.35
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352_G440_R0.5970.35
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473_L601_R0.5920.35
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428_V503_A0.5900.35
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110_G564_G0.5890.34
13_P269_S0.5890.34
322_K577_E0.5890.34
384_P479_D0.5890.34
520_Y617_P0.5880.34
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66_A507_A0.5860.34
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200_G387_S0.5860.34
264_N524_R0.5860.34
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400_G404_L0.5850.34
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316_V331_P0.5850.34
405_W411_A0.5850.34
286_Q290_L0.5850.34
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197_Y494_L0.5780.34
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385_I389_V0.5770.33
82_L228_Q0.5770.33
289_K305_T0.5770.33
274_V368_L0.5760.33
44_S569_K0.5750.33
174_L418_C0.5750.33
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456_Q474_R0.5740.33
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310_G348_S0.5730.33
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616_R619_F0.5720.33
367_V456_Q0.5720.33
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297_M335_W0.5720.33
624_P628_L0.5710.33
428_V513_Q0.5710.33
138_L150_T0.5710.33
253_L477_L0.5710.33
60_S220_E0.5700.33
334_L561_I0.5690.33
366_R465_M0.5690.33
158_I414_L0.5690.33
506_K519_F0.5690.33
347_I480_R0.5690.33
76_L83_T0.5680.33
432_M549_L0.5680.33
66_A105_I0.5680.33
196_R200_G0.5680.33
415_A418_C0.5680.33
30_L34_N0.5670.33
111_D304_V0.5670.33
112_L181_V0.5670.33
67_W212_W0.5670.33
635_W638_S0.5670.33
602_A623_F0.5660.33
77_K213_L0.5660.33
208_G510_A0.5660.33
182_D211_K0.5660.33
339_W444_S0.5650.32
190_G564_G0.5650.32
380_K391_V0.5650.32
63_V67_W0.5650.32
35_I291_I0.5650.32
96_L110_G0.5630.32
301_L391_V0.5630.32
540_D582_R0.5630.32
267_C436_S0.5630.32
254_L354_R0.5620.32
381_F384_P0.5620.32
45_Q321_L0.5610.32
151_L206_L0.5600.32
24_L602_A0.5600.32
286_Q289_K0.5590.32
222_R514_I0.5590.32
104_D622_I0.5580.32
240_S456_Q0.5580.32
269_S604_V0.5570.32
256_V492_Y0.5570.32
4_R9_E0.5570.32
483_Q495_I0.5570.32
416_L422_G0.5560.32
573_V591_V0.5560.32
153_I421_L0.5560.32
127_L154_A0.5560.32
41_K308_A0.5550.32
140_T373_V0.5550.32
511_E573_V0.5550.32
440_R453_T0.5550.32
408_L419_G0.5550.32
363_Q431_R0.5540.32
547_L620_Y0.5540.32
529_A601_R0.5530.31
99_V131_R0.5530.31
39_M165_F0.5530.31
109_Y348_S0.5530.31
546_E564_G0.5520.31
389_V562_V0.5520.31
24_L441_L0.5520.31
367_V465_M0.5510.31
69_E565_N0.5510.31
541_E565_N0.5500.31
74_R212_W0.5490.31
498_A597_T0.5490.31
327_A473_L0.5490.31
399_G403_L0.5490.31
24_L480_R0.5480.31
38_R476_D0.5480.31
602_A624_P0.5480.31
143_T211_K0.5480.31
66_A413_V0.5480.31
474_R491_N0.5470.31
219_P387_S0.5470.31
251_T287_L0.5470.31
534_P537_G0.5470.31
69_E140_T0.5460.31
297_M511_E0.5460.31
396_G417_L0.5450.31
293_G409_A0.5450.31
301_L591_V0.5440.31
579_L583_L0.5440.31
144_I342_G0.5440.31
19_W420_V0.5420.31
155_G197_Y0.5420.31
194_T197_Y0.5410.31
492_Y496_N0.5410.31
69_E417_L0.5400.30
40_E378_P0.5390.30
496_N612_W0.5390.30
545_R608_R0.5390.30
116_P205_Q0.5380.30
5_W290_L0.5380.30
26_V173_R0.5370.30
436_S444_S0.5370.30
77_K208_G0.5370.30
57_L157_V0.5360.30
419_G433_T0.5360.30
387_S398_M0.5350.30
6_F528_T0.5350.30
186_A597_T0.5350.30
581_K586_A0.5350.30
315_N523_V0.5340.30
312_L388_V0.5340.30
21_A258_A0.5340.30
77_K417_L0.5340.30
39_M50_F0.5330.30
301_L515_V0.5320.30
199_F206_L0.5320.30
160_E175_M0.5310.30
205_Q387_S0.5310.30
427_N575_M0.5310.30
15_L23_S0.5290.30
294_Q460_F0.5290.30
132_L499_T0.5290.30
300_T604_V0.5280.30
75_G425_L0.5280.30
175_M178_L0.5280.30
387_S504_P0.5280.30
21_A262_A0.5270.29
327_A421_L0.5260.29
388_V560_P0.5260.29
305_T487_P0.5260.29
486_P489_S0.5260.29
95_Q128_L0.5260.29
455_S470_L0.5250.29
399_G405_W0.5250.29
285_A305_T0.5250.29
69_E402_M0.5240.29
310_G622_I0.5240.29
209_Y213_L0.5230.29
290_L495_I0.5230.29
95_Q485_L0.5230.29
120_K557_D0.5230.29
562_V577_E0.5230.29
28_C257_A0.5230.29
247_S442_A0.5220.29
213_L216_Q0.5220.29
420_V587_L0.5210.29
151_L359_L0.5210.29
31_A313_F0.5210.29
258_A263_M0.5210.29
326_P468_A0.5200.29
138_L144_I0.5200.29
412_V601_R0.5190.29
504_P507_A0.5190.29
308_A534_P0.5190.29
190_G266_Y0.5190.29
5_W13_P0.5190.29
385_I435_K0.5190.29
64_P212_W0.5190.29
348_S351_V0.5180.29
258_A449_Q0.5180.29
268_R505_L0.5180.29
120_K152_R0.5170.29
50_F278_K0.5170.29
444_S450_P0.5170.29
376_V428_V0.5170.29
314_E365_L0.5160.29
258_A456_Q0.5160.29
70_E202_N0.5160.29
21_A30_L0.5150.29
295_W463_S0.5150.29
151_L384_P0.5150.29
179_A429_L0.5150.29
229_D463_S0.5140.28
294_Q442_A0.5140.28
65_Q83_T0.5140.28
287_L291_I0.5140.28
257_A294_Q0.5140.28
415_A422_G0.5140.28
345_T375_N0.5140.28
362_T367_V0.5130.28
146_V316_V0.5130.28
384_P388_V0.5130.28
558_H567_P0.5120.28
27_A410_G0.5120.28
441_L445_R0.5120.28
162_D351_V0.5120.28
111_D507_A0.5120.28
341_L557_D0.5120.28
246_L589_D0.5110.28
77_K80_K0.5110.28
97_A301_L0.5100.28
550_T617_P0.5080.28
28_C266_Y0.5080.28
247_S463_S0.5080.28
256_V347_I0.5080.28
478_L482_Q0.5070.28
509_L577_E0.5070.28
461_S597_T0.5070.28
159_Q297_M0.5070.28
250_L359_L0.5060.28
259_V352_G0.5060.28
13_P16_L0.5060.28
248_A302_S0.5050.28
332_A337_W0.5050.28
622_I625_E0.5040.28
190_G448_R0.5040.28
156_E159_Q0.5030.28
244_L291_I0.5020.28
14_S269_S0.5020.28
481_W496_N0.5020.28
138_L181_V0.5020.28
390_V567_P0.5010.27
133_M634_S0.5010.27
531_N610_V0.5000.27
536_E540_D0.5000.27
157_V639_F0.5000.27
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
3ftjA 1 0.2301 99 0.917 Contact Map
3is6A 2 0.2475 98 0.94 Contact Map
3w9iA 3 0.4801 82.9 0.969 Contact Map
4mt1A 3 0.4876 81.6 0.969 Contact Map
4k0jA 3 0.4639 70.9 0.972 Contact Map
3ne5A 3 0.4776 69.7 0.972 Contact Map
4dx5A 3 0.4863 65.5 0.973 Contact Map
2l66A 2 0.0659 62.6 0.973 Contact Map
1yfbA 2 0.0647 60.3 0.974 Contact Map
3o27A 2 0.0721 56 0.974 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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