ALLC - ECOLI - GREMLIN Contacts

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ALLC - Allantoate amidohydrolase

UniProt:	P77425	Sequences: MITHFRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLNGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKRMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDLWMDEEPVPMNKELVATLTELCEREKLNYRVMHSGAGHDAQIFAPRVPTCMIFIPSINGISHNPAERTNITDLAEGVKTLALMLYQLAWQK	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG13623
Length:	411 (398)
Sequences:	4167 (3078)
Seq/√Len:	154.3

ECOLI - ALLC YGEY DAPE
BACSU - ALLC PEPVL FAPD YODQ AMHX YXEP YTNL YHAA
SULSO - Q97VB6 Q97Y12 CBPX2 CBPX1

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
241_A	315_I	4.140	1.00
339_T	351_V	3.750	1.00
65_R	119_E	3.449	1.00
47_M	64_G	3.439	1.00
376_S	388_T	2.999	1.00
200_N	350_R	2.988	1.00
78_S	100_A	2.946	1.00
250_V	313_M	2.917	1.00
340_E	406_Q	2.894	1.00
42_Q	46_R	2.885	1.00
344_R	402_L	2.831	1.00
78_S	404_L	2.800	1.00
159_N	164_A	2.778	1.00
220_L	245_I	2.730	1.00
12_T	105_D	2.641	1.00
37_L	41_Q	2.634	1.00
95_F	393_L	2.621	1.00
345_E	402_L	2.507	1.00
44_K	62_L	2.322	1.00
66_L	114_P	2.284	1.00
344_R	406_Q	2.215	1.00
223_E	236_R	2.215	1.00
44_K	48_A	2.213	1.00
8_A	102_L	2.148	1.00
160_S	163_D	2.138	1.00
338_L	403_M	2.132	1.00
66_L	108_K	2.124	1.00
70_E	115_L	2.121	1.00
244_R	312_E	2.101	1.00
50_S	101_W	2.065	1.00
35_E	38_E	2.033	1.00
377_I	387_R	2.028	1.00
208_N	351_V	2.023	1.00
69_T	115_L	2.021	1.00
103_A	404_L	2.020	1.00
104_I	120_V	2.005	1.00
270_R	280_K	1.955	1.00
374_I	388_T	1.950	1.00
248_Q	305_D	1.950	1.00
106_W	110_Q	1.937	1.00
388_T	393_L	1.919	1.00
219_T	280_K	1.910	1.00
380_I	383_N	1.909	1.00
42_Q	45_K	1.895	1.00
260_L	298_F	1.879	1.00
179_P	182_D	1.845	1.00
334_L	370_C	1.837	1.00
331_N	368_P	1.832	1.00
34_P	167_A	1.828	1.00
217_T	320_D	1.826	1.00
116_R	184_K	1.816	1.00
15_W	42_Q	1.793	1.00
11_E	15_W	1.771	1.00
53_E	67_N	1.768	1.00
62_L	122_A	1.763	1.00
34_P	38_E	1.762	1.00
9_I	397_V	1.751	1.00
221_N	280_K	1.745	1.00
339_T	343_E	1.719	1.00
46_R	49_A	1.718	1.00
164_A	167_A	1.704	1.00
268_E	282_T	1.695	1.00
305_D	308_A	1.687	1.00
387_R	390_I	1.681	1.00
308_A	312_E	1.676	1.00
7_Q	11_E	1.670	1.00
106_W	401_A	1.666	1.00
43_F	82_I	1.663	1.00
91_L	387_R	1.645	1.00
75_V	117_T	1.634	1.00
292_A	327_P	1.614	1.00
299_T	303_E	1.611	1.00
245_I	306_M	1.601	1.00
41_Q	170_F	1.587	1.00
9_I	98_L	1.585	1.00
15_W	18_S	1.568	1.00
45_K	49_A	1.566	1.00
244_R	313_M	1.565	1.00
107_L	112_G	1.561	1.00
45_K	48_A	1.550	1.00
220_L	283_F	1.546	1.00
338_L	372_I	1.529	1.00
204_I	399_T	1.527	1.00
225_N	230_T	1.527	1.00
221_N	316_G	1.527	1.00
70_E	73_Q	1.527	1.00
26_G	29_R	1.522	1.00
187_V	407_L	1.509	1.00
376_S	392_D	1.504	1.00
77_L	121_V	1.501	1.00
187_V	403_M	1.483	1.00
300_Q	304_N	1.474	1.00
203_S	392_D	1.466	1.00
47_M	101_W	1.463	1.00
52_L	66_L	1.458	1.00
203_S	348_N	1.455	1.00
78_S	103_A	1.451	1.00
184_K	187_V	1.445	1.00
73_Q	116_R	1.441	1.00
146_N	149_D	1.436	1.00
10_E	14_P	1.436	1.00
337_T	406_Q	1.423	1.00
67_N	117_T	1.419	1.00
181_Q	184_K	1.413	1.00
335_V	351_V	1.412	1.00
43_F	64_G	1.408	1.00
108_K	114_P	1.407	1.00
341_L	399_T	1.383	1.00
44_K	54_T	1.377	1.00
99_A	397_V	1.372	1.00
136_W	161_F	1.361	1.00
107_L	114_P	1.360	1.00
255_R	301_Q	1.357	1.00
106_W	398_K	1.357	1.00
253_A	262_L	1.357	1.00
82_I	122_A	1.355	1.00
239_V	267_V	1.355	1.00
69_T	113_A	1.355	1.00
77_L	183_I	1.347	1.00
303_E	307_R	1.343	1.00
239_V	281_T	1.339	1.00
244_R	251_E	1.330	1.00
304_N	308_A	1.330	1.00
227_A	263_T	1.326	1.00
59_V	140_N	1.311	1.00
248_Q	251_E	1.309	1.00
84_T	94_Q	1.307	1.00
80_S	97_A	1.301	1.00
321_L	324_D	1.300	1.00
402_L	406_Q	1.298	1.00
144_L	365_P	1.298	1.00
360_A	369_T	1.297	1.00
78_S	187_V	1.295	1.00
181_Q	187_V	1.288	1.00
238_T	281_T	1.280	1.00
217_T	282_T	1.277	1.00
199_S	234_Y	1.277	1.00
17_S	90_N	1.274	1.00
52_L	104_I	1.274	1.00
219_T	318_D	1.274	1.00
341_L	406_Q	1.274	1.00
219_T	282_T	1.270	1.00
394_A	398_K	1.268	1.00
221_N	318_D	1.258	1.00
20_G	35_E	1.253	1.00
36_W	40_Q	1.251	1.00
249_S	262_L	1.244	1.00
240_Y	250_V	1.244	1.00
260_L	289_H	1.237	1.00
125_E	128_G	1.230	1.00
310_C	317_I	1.225	1.00
155_D	159_N	1.215	1.00
44_K	56_F	1.214	1.00
12_T	102_L	1.214	1.00
186_F	360_A	1.213	1.00
246_C	267_V	1.211	1.00
242_F	246_C	1.209	1.00
179_P	183_I	1.203	1.00
377_I	389_N	1.194	1.00
130_R	155_D	1.193	1.00
343_E	349_Y	1.187	1.00
240_Y	246_C	1.181	1.00
245_I	283_F	1.180	1.00
12_T	46_R	1.179	1.00
148_D	151_R	1.178	1.00
231_P	234_Y	1.172	1.00
244_R	247_H	1.171	1.00
297_D	301_Q	1.169	1.00
163_D	166_K	1.166	1.00
16_L	39_T	1.164	1.00
74_E	116_R	1.155	1.00
104_I	118_V	1.150	1.00
19_F	42_Q	1.137	1.00
239_V	269_P	1.136	1.00
105_D	109_T	1.136	1.00
196_V	231_P	1.136	1.00
269_P	281_T	1.131	1.00
203_S	395_E	1.123	1.00
14_P	18_S	1.119	1.00
202_Q	350_R	1.118	1.00
10_E	390_I	1.113	1.00
242_F	267_V	1.110	0.99
76_V	185_A	1.100	0.99
101_W	120_V	1.098	0.99
162_V	166_K	1.087	0.99
166_K	172_L	1.085	0.99
104_I	108_K	1.080	0.99
76_V	116_R	1.072	0.99
183_I	187_V	1.069	0.99
43_F	47_M	1.069	0.99
246_C	264_F	1.065	0.99
112_G	405_Y	1.062	0.99
338_L	370_C	1.061	0.99
19_F	39_T	1.059	0.99
147_P	151_R	1.057	0.99
38_E	41_Q	1.051	0.99
63_Y	121_V	1.051	0.99
63_Y	77_L	1.045	0.99
220_L	242_F	1.044	0.99
209_A	290_T	1.043	0.99
292_A	326_E	1.041	0.99
64_G	67_N	1.034	0.99
223_E	380_I	1.029	0.99
171_T	174_N	1.024	0.99
305_D	309_I	1.020	0.99
220_L	317_I	1.014	0.99
66_L	104_I	0.992	0.99
20_G	87_N	0.990	0.99
183_I	367_V	0.990	0.99
389_N	392_D	0.988	0.99
15_W	46_R	0.987	0.99
376_S	389_N	0.984	0.99
34_P	164_A	0.982	0.99
50_S	105_D	0.982	0.99
179_P	184_K	0.980	0.99
374_I	396_G	0.979	0.99
148_D	152_N	0.978	0.99
99_A	189_L	0.977	0.99
103_A	401_A	0.976	0.99
95_F	189_L	0.975	0.99
68_G	117_T	0.974	0.99
41_Q	44_K	0.974	0.99
135_F	362_I	0.974	0.99
37_L	168_C	0.972	0.99
398_K	402_L	0.966	0.99
31_L	36_W	0.965	0.99
154_C	160_S	0.961	0.99
230_T	277_V	0.960	0.99
61_N	64_G	0.956	0.98
61_N	137_G	0.955	0.98
341_L	402_L	0.953	0.98
306_M	317_I	0.952	0.98
342_C	399_T	0.948	0.98
236_R	316_G	0.944	0.98
30_L	37_L	0.943	0.98
347_L	395_E	0.943	0.98
335_V	370_C	0.940	0.98
341_L	345_E	0.938	0.98
86_V	273_T	0.935	0.98
43_F	122_A	0.934	0.98
216_Y	299_T	0.928	0.98
20_G	25_G	0.924	0.98
343_E	348_N	0.922	0.98
397_V	401_A	0.920	0.98
175_A	178_T	0.920	0.98
43_F	120_V	0.919	0.98
340_E	344_R	0.917	0.98
10_E	91_L	0.911	0.98
180_R	183_I	0.911	0.98
256_M	297_D	0.903	0.98
251_E	255_R	0.903	0.98
161_F	164_A	0.902	0.98
206_V	338_L	0.901	0.98
242_F	283_F	0.900	0.98
19_F	38_E	0.894	0.98
330_M	369_T	0.893	0.98
16_L	94_Q	0.887	0.98
183_I	186_F	0.878	0.97
269_P	272_N	0.874	0.97
150_V	396_G	0.869	0.97
65_R	75_V	0.867	0.97
395_E	398_K	0.865	0.97
24_A	29_R	0.863	0.97
336_A	340_E	0.857	0.97
335_V	339_T	0.857	0.97
99_A	400_L	0.856	0.97
363_F	367_V	0.854	0.97
225_N	277_V	0.853	0.97
289_H	294_V	0.852	0.97
183_I	189_L	0.852	0.97
189_L	396_G	0.852	0.97
332_K	336_A	0.850	0.97
30_L	33_S	0.849	0.97
296_R	324_D	0.842	0.97
13_L	17_S	0.834	0.96
151_R	162_V	0.828	0.96
380_I	385_A	0.828	0.96
99_A	396_G	0.826	0.96
292_A	296_R	0.824	0.96
220_L	315_I	0.823	0.96
162_V	165_M	0.820	0.96
345_E	398_K	0.815	0.96
41_Q	45_K	0.813	0.96
82_I	94_Q	0.810	0.96
135_F	139_K	0.810	0.96
391_T	395_E	0.809	0.96
18_S	21_A	0.804	0.96
193_Q	196_V	0.804	0.96
242_F	264_F	0.803	0.96
146_N	150_V	0.800	0.95
66_L	107_L	0.799	0.95
252_K	301_Q	0.798	0.95
218_V	285_I	0.794	0.95
163_D	167_A	0.790	0.95
184_K	189_L	0.788	0.95
16_L	98_L	0.787	0.95
46_R	50_S	0.785	0.95
40_Q	62_L	0.783	0.95
32_Y	60_G	0.782	0.95
130_R	362_I	0.782	0.95
202_Q	348_N	0.780	0.95
260_L	294_V	0.780	0.95
371_M	381_S	0.778	0.95
249_S	283_F	0.776	0.95
74_E	184_K	0.775	0.95
14_P	90_N	0.774	0.95
11_E	14_P	0.773	0.95
149_D	153_I	0.773	0.95
36_W	124_A	0.773	0.95
142_F	366_R	0.773	0.95
67_N	72_P	0.772	0.94
219_T	320_D	0.769	0.94
285_I	302_L	0.766	0.94
193_Q	204_I	0.765	0.94
135_F	213_Q	0.764	0.94
337_T	341_L	0.764	0.94
64_G	68_G	0.763	0.94
198_E	202_Q	0.762	0.94
65_R	117_T	0.759	0.94
85_V	123_M	0.758	0.94
16_L	43_F	0.758	0.94
310_C	315_I	0.757	0.94
270_R	282_T	0.754	0.94
55_R	63_Y	0.748	0.94
142_F	363_F	0.747	0.93
25_G	29_R	0.740	0.93
300_Q	303_E	0.740	0.93
55_R	119_E	0.740	0.93
252_K	255_R	0.736	0.93
32_Y	124_A	0.736	0.93
294_V	297_D	0.736	0.93
54_T	62_L	0.736	0.93
193_Q	197_L	0.734	0.93
47_M	54_T	0.731	0.93
52_L	64_G	0.731	0.93
57_D	61_N	0.730	0.93
206_V	335_V	0.729	0.93
245_I	310_C	0.729	0.93
335_V	338_L	0.728	0.93
218_V	319_I	0.724	0.92
66_L	113_A	0.724	0.92
137_G	140_N	0.720	0.92
262_L	287_C	0.718	0.92
52_L	101_W	0.717	0.92
229_T	261_V	0.717	0.92
252_K	298_F	0.716	0.92
47_M	104_I	0.715	0.92
179_P	185_A	0.715	0.92
187_V	190_H	0.714	0.92
304_N	307_R	0.714	0.92
152_N	160_S	0.714	0.92
187_V	400_L	0.713	0.92
220_L	241_A	0.711	0.92
52_L	108_K	0.710	0.92
388_T	392_D	0.709	0.92
166_K	171_T	0.709	0.92
129_S	276_V	0.708	0.92
139_K	145_A	0.707	0.91
58_E	147_P	0.707	0.91
148_D	153_I	0.704	0.91
123_M	186_F	0.704	0.91
251_E	305_D	0.704	0.91
200_N	203_S	0.704	0.91
196_V	200_N	0.703	0.91
229_T	356_A	0.703	0.91
40_Q	124_A	0.702	0.91
218_V	306_M	0.702	0.91
296_R	300_Q	0.701	0.91
30_L	129_S	0.699	0.91
27_M	30_L	0.698	0.91
182_D	185_A	0.696	0.91
136_W	139_K	0.696	0.91
82_I	97_A	0.696	0.91
50_S	108_K	0.695	0.91
125_E	133_Y	0.695	0.91
287_C	298_F	0.694	0.91
48_A	53_E	0.693	0.91
218_V	283_F	0.692	0.91
346_K	349_Y	0.689	0.90
343_E	346_K	0.687	0.90
107_L	113_A	0.687	0.90
252_K	305_D	0.686	0.90
160_S	164_A	0.686	0.90
266_K	284_T	0.685	0.90
216_Y	319_I	0.683	0.90
24_A	384_P	0.683	0.90
266_K	272_N	0.682	0.90
63_Y	141_I	0.682	0.90
135_F	138_S	0.678	0.90
28_T	87_N	0.678	0.90
247_H	250_V	0.676	0.90
78_S	118_V	0.676	0.90
220_L	310_C	0.675	0.89
43_F	97_A	0.674	0.89
337_T	340_E	0.674	0.89
340_E	343_E	0.674	0.89
159_N	167_A	0.674	0.89
398_K	401_A	0.673	0.89
155_D	158_G	0.673	0.89
179_P	187_V	0.673	0.89
342_C	349_Y	0.672	0.89
145_A	150_V	0.670	0.89
293_A	296_R	0.670	0.89
217_T	322_W	0.668	0.89
123_M	363_F	0.668	0.89
239_V	242_F	0.667	0.89
337_T	407_L	0.666	0.89
79_G	359_D	0.664	0.89
190_H	193_Q	0.663	0.89
243_S	247_H	0.662	0.89
172_L	175_A	0.659	0.88
389_N	393_L	0.658	0.88
224_S	238_T	0.658	0.88
182_D	187_V	0.655	0.88
198_E	378_N	0.654	0.88
102_L	106_W	0.653	0.88
223_E	277_V	0.653	0.88
8_A	109_T	0.652	0.88
182_D	189_L	0.651	0.88
374_I	393_L	0.650	0.88
375_P	392_D	0.649	0.88
17_S	27_M	0.648	0.88
204_I	375_P	0.645	0.87
106_W	109_T	0.645	0.87
214_R	299_T	0.644	0.87
62_L	67_N	0.644	0.87
125_E	136_W	0.642	0.87
152_N	351_V	0.640	0.87
22_D	25_G	0.639	0.87
110_Q	401_A	0.638	0.87
390_I	394_A	0.636	0.87
363_F	366_R	0.635	0.86
140_N	150_V	0.635	0.86
66_L	112_G	0.635	0.86
102_L	105_D	0.633	0.86
37_L	56_F	0.629	0.86
26_G	30_L	0.628	0.86
307_R	310_C	0.628	0.86
28_T	31_L	0.627	0.86
12_T	15_W	0.625	0.86
95_F	374_I	0.625	0.86
147_P	150_V	0.624	0.85
243_S	246_C	0.623	0.85
401_A	405_Y	0.621	0.85
239_V	278_P	0.621	0.85
339_T	349_Y	0.619	0.85
21_A	24_A	0.618	0.85
55_R	65_R	0.617	0.85
43_F	101_W	0.616	0.85
60_G	64_G	0.616	0.85
238_T	279_G	0.616	0.85
309_I	313_M	0.616	0.85
392_D	395_E	0.615	0.85
139_K	362_I	0.615	0.85
41_Q	56_F	0.615	0.85
336_A	339_T	0.613	0.84
125_E	227_A	0.613	0.84
332_K	365_P	0.612	0.84
341_L	403_M	0.612	0.84
46_R	101_W	0.611	0.84
211_V	290_T	0.610	0.84
100_A	120_V	0.609	0.84
239_V	243_S	0.609	0.84
181_Q	185_A	0.609	0.84
201_G	204_I	0.608	0.84
220_L	306_M	0.606	0.84
228_G	265_G	0.605	0.84
62_L	65_R	0.603	0.84
12_T	42_Q	0.603	0.84
223_E	378_N	0.601	0.83
336_A	351_V	0.599	0.83
249_S	285_I	0.598	0.83
147_P	156_A	0.596	0.83
110_Q	405_Y	0.592	0.82
249_S	264_F	0.592	0.82
141_I	363_F	0.591	0.82
56_F	62_L	0.590	0.82
101_W	104_I	0.589	0.82
372_I	396_G	0.589	0.82
68_G	73_Q	0.589	0.82
136_W	153_I	0.589	0.82
195_C	199_S	0.588	0.82
199_S	233_G	0.586	0.82
192_E	197_L	0.586	0.82
336_A	343_E	0.585	0.82
204_I	395_E	0.585	0.82
19_F	35_E	0.584	0.82
16_L	82_I	0.584	0.82
159_N	163_D	0.583	0.81
165_M	169_G	0.583	0.81
111_Y	114_P	0.583	0.81
214_R	295_L	0.583	0.81
203_S	375_P	0.581	0.81
180_R	185_A	0.580	0.81
357_G	361_Q	0.579	0.81
244_R	248_Q	0.577	0.81
245_I	317_I	0.576	0.81
54_T	64_G	0.576	0.81
241_A	309_I	0.575	0.81
231_P	355_G	0.574	0.80
236_R	314_D	0.573	0.80
9_I	13_L	0.572	0.80
59_V	147_P	0.571	0.80
24_A	30_L	0.568	0.80
149_D	152_N	0.567	0.80
291_D	294_V	0.567	0.80
240_Y	313_M	0.567	0.80
216_Y	321_L	0.566	0.79
48_A	54_T	0.566	0.79
69_T	72_P	0.566	0.79
32_Y	36_W	0.564	0.79
146_N	151_R	0.562	0.79
151_R	158_G	0.562	0.79
190_H	194_G	0.561	0.79
155_D	353_H	0.558	0.79
144_L	147_P	0.558	0.79
152_N	157_K	0.556	0.78
27_M	94_Q	0.555	0.78
131_F	155_D	0.554	0.78
187_V	404_L	0.554	0.78
64_G	120_V	0.554	0.78
22_D	87_N	0.554	0.78
153_I	354_S	0.552	0.78
240_Y	247_H	0.552	0.78
290_T	353_H	0.551	0.78
13_L	98_L	0.551	0.78
387_R	393_L	0.551	0.78
151_R	171_T	0.551	0.78
225_N	235_R	0.549	0.77
372_I	400_L	0.548	0.77
396_G	400_L	0.548	0.77
76_V	184_K	0.548	0.77
271_P	278_P	0.547	0.77
84_T	90_N	0.545	0.77
59_V	137_G	0.544	0.77
95_F	99_A	0.544	0.77
227_A	265_G	0.544	0.77
207_V	212_G	0.543	0.77
69_T	117_T	0.543	0.77
194_G	197_L	0.543	0.77
164_A	168_C	0.543	0.77
85_V	273_T	0.542	0.77
24_A	27_M	0.542	0.77
128_G	135_F	0.541	0.76
161_F	165_M	0.541	0.76
204_I	347_L	0.539	0.76
94_Q	122_A	0.538	0.76
136_W	150_V	0.536	0.76
193_Q	207_V	0.535	0.76
152_N	162_V	0.535	0.76
17_S	21_A	0.534	0.75
23_P	131_F	0.534	0.75
81_H	92_D	0.534	0.75
248_Q	309_I	0.533	0.75
239_V	246_C	0.531	0.75
232_M	261_V	0.531	0.75
165_M	168_C	0.529	0.75
196_V	234_Y	0.528	0.75
218_V	317_I	0.527	0.75
151_R	157_K	0.526	0.74
361_Q	364_A	0.525	0.74
297_D	300_Q	0.525	0.74
211_V	215_R	0.524	0.74
146_N	156_A	0.520	0.74
49_A	105_D	0.520	0.74
303_E	319_I	0.520	0.74
33_S	36_W	0.520	0.74
8_A	12_T	0.520	0.74
9_I	394_A	0.519	0.73
181_Q	191_I	0.518	0.73
225_N	380_I	0.518	0.73
61_N	121_V	0.518	0.73
84_T	393_L	0.518	0.73
256_M	301_Q	0.516	0.73
337_T	403_M	0.515	0.73
188_E	192_E	0.513	0.73
24_A	28_T	0.512	0.72
192_E	205_G	0.512	0.72
210_I	213_Q	0.512	0.72
299_T	302_L	0.510	0.72
148_D	157_K	0.510	0.72
333_E	337_T	0.510	0.72
334_L	337_T	0.510	0.72
108_K	111_Y	0.509	0.72
244_R	309_I	0.507	0.72
91_L	393_L	0.507	0.72
53_E	65_R	0.506	0.72
345_E	395_E	0.506	0.72
210_I	361_Q	0.505	0.71
90_N	94_Q	0.504	0.71
55_R	140_N	0.503	0.71
10_E	394_A	0.503	0.71
41_Q	48_A	0.502	0.71
125_E	129_S	0.501	0.71
187_V	334_L	0.500	0.71
17_S	20_G	0.500	0.71
107_L	110_Q	0.500	0.71

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4pxdA	2	0.9976	100	0.35	Contact Map
3n5fA	2	0.983	100	0.355	Contact Map
4wjbA	2	0.9927	100	0.355	Contact Map
2v8hA	2	0.9903	100	0.367	Contact Map
4pxeA	2	0.9976	100	0.369	Contact Map
3khxA	1	0.8735	100	0.463	Contact Map
1lfwA	1	0.9538	100	0.471	Contact Map
3gb0A	2	0.8321	100	0.479	Contact Map
3ifeA	2	0.8613	100	0.481	Contact Map
3rzaA	2	0.8273	100	0.481	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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