YAHF - ECOLI - GREMLIN Contacts

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YAHF - Uncharacterized protein YahF

UniProt:	P77187	Sequences: MSVKIVIKPNTYFDSVSLMSISTRANKLDGVEQAFVAMATEMNKGVLKNLGLLTPELEQAKNGDLMIVINGKSGADNEQLLVEIEELFNTKAQSGSHEARYATIGSAKKHIPESNLAVISVNGLFAAREARQALQNDLNVMLFSDNVSVEDELALKQLAHEKGLLMMGPDCGTAIINGAALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGVSQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPAVARKVLERARACRKPVVVCFLDRGETPVDEQGLQFARGTKEAALKAVMLSGVKQENLDLHTLNQPLIADVRARLQPQQKYIRGLFCGGTLCDETMFAVMEKHGDVYSNIQPDPEFRLKDINRSIKHTFLDFGDDDFTNGKPHPMIDPTNRISRLIEEARDPEVAVIVMDFVLGFGSHEDPVGSTIETIKEAKAIAAAEGRELIILAYVLGTDLDTPSLEQQSQMLLDAGVILASSSTNTGLLAREFICKGEEA	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG13590
Length:	515 (404)
Sequences:	2698 (2028)
Seq/√Len:	100.9

ECOLI - YAHF FDRA PKA
SULSO - Q97XD9

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
103_T	106_S	4.789	1.00
305_A	319_L	4.287	1.00
102_A	106_S	4.150	1.00
191_N	250_E	4.146	1.00
342_Y	426_A	4.145	1.00
134_L	162_K	3.971	1.00
378_R	382_I	3.861	1.00
110_H	114_S	3.846	1.00
131_R	154_A	3.777	1.00
165_L	233_G	3.603	1.00
107_A	114_S	3.351	1.00
148_S	152_E	3.244	1.00
105_G	132_Q	3.220	1.00
121_V	129_E	3.218	1.00
309_V	319_L	2.990	1.00
308_A	312_S	2.916	1.00
193_G	217_S	2.801	1.00
117_A	133_A	2.798	1.00
133_A	138_L	2.744	1.00
374_D	422_D	2.715	1.00
131_R	158_L	2.653	1.00
88_F	107_A	2.578	1.00
130_A	140_V	2.511	1.00
153_L	157_Q	2.491	1.00
121_V	125_F	2.487	1.00
327_P	500_N	2.482	1.00
131_R	135_Q	2.430	1.00
142_L	155_L	2.319	1.00
217_S	249_T	2.318	1.00
269_E	317_E	2.306	1.00
371_I	424_E	2.278	1.00
117_A	138_L	2.246	1.00
340_Q	426_A	2.226	1.00
130_A	158_L	2.179	1.00
131_R	161_E	2.162	1.00
377_F	421_R	2.124	1.00
202_S	219_L	2.114	1.00
87_L	98_E	2.112	1.00
105_G	135_Q	2.105	1.00
128_R	132_Q	2.083	1.00
252_I	272_R	2.050	1.00
347_F	353_C	2.032	1.00
119_I	129_E	2.032	1.00
80_L	83_E	2.024	1.00
234_L	239_A	2.014	1.00
86_E	101_Y	1.969	1.00
110_H	136_N	1.948	1.00
253_A	329_I	1.942	1.00
246_D	249_T	1.940	1.00
371_I	422_D	1.938	1.00
341_K	366_D	1.935	1.00
416_L	428_I	1.879	1.00
104_I	133_A	1.854	1.00
269_E	278_V	1.840	1.00
427_V	505_A	1.829	1.00
101_Y	108_K	1.821	1.00
312_S	317_E	1.809	1.00
92_A	100_R	1.806	1.00
193_G	249_T	1.804	1.00
344_R	425_V	1.787	1.00
368_Y	425_V	1.760	1.00
485_Q	489_D	1.752	1.00
244_E	272_R	1.720	1.00
94_S	97_H	1.706	1.00
372_Q	376_E	1.704	1.00
254_L	280_V	1.694	1.00
320_D	328_L	1.670	1.00
305_A	309_V	1.669	1.00
280_V	317_E	1.666	1.00
431_D	434_L	1.658	1.00
134_L	158_L	1.651	1.00
285_R	362_E	1.649	1.00
241_G	271_A	1.618	1.00
157_Q	161_E	1.600	1.00
417_I	421_R	1.582	1.00
93_Q	100_R	1.577	1.00
154_A	157_Q	1.554	1.00
156_K	232_G	1.553	1.00
447_I	451_K	1.546	1.00
236_M	256_S	1.534	1.00
127_A	154_A	1.520	1.00
130_A	164_L	1.517	1.00
433_V	436_F	1.509	1.00
356_T	429_V	1.503	1.00
159_A	166_M	1.501	1.00
324_L	503_L	1.499	1.00
194_I	216_V	1.495	1.00
193_G	243_L	1.490	1.00
371_I	374_D	1.471	1.00
107_A	110_H	1.462	1.00
95_G	100_R	1.459	1.00
429_V	501_T	1.448	1.00
261_P	264_A	1.443	1.00
171_C	221_G	1.442	1.00
123_G	144_S	1.439	1.00
280_V	312_S	1.428	1.00
384_R	394_G	1.424	1.00
370_N	425_V	1.419	1.00
420_A	428_I	1.417	1.00
434_L	437_G	1.412	1.00
84_I	109_K	1.398	1.00
240_I	252_I	1.394	1.00
134_L	164_L	1.387	1.00
192_I	251_I	1.378	0.99
444_G	448_E	1.372	0.99
103_T	132_Q	1.372	0.99
343_I	360_V	1.369	0.99
220_I	243_L	1.365	0.99
167_M	174_A	1.362	0.99
396_D	411_N	1.362	0.99
346_L	419_E	1.342	0.99
128_R	131_R	1.335	0.99
107_A	136_N	1.327	0.99
410_T	414_S	1.326	0.99
105_G	136_N	1.321	0.99
176_I	218_Q	1.316	0.99
369_S	372_Q	1.314	0.99
104_I	136_N	1.310	0.99
385_S	394_G	1.306	0.99
344_R	419_E	1.284	0.99
195_V	243_L	1.280	0.99
167_M	234_L	1.275	0.99
256_S	280_V	1.268	0.99
245_N	271_A	1.261	0.99
81_L	84_I	1.258	0.99
218_Q	243_L	1.256	0.99
258_P	300_G	1.251	0.99
152_E	232_G	1.249	0.99
178_G	248_Q	1.245	0.99
279_V	320_D	1.245	0.99
237_L	268_L	1.235	0.99
441_D	444_G	1.230	0.99
414_S	417_I	1.227	0.99
167_M	239_A	1.225	0.99
360_V	365_G	1.222	0.99
119_I	130_A	1.222	0.99
241_G	264_A	1.207	0.99
85_E	98_E	1.201	0.99
266_K	311_L	1.201	0.99
377_F	418_E	1.198	0.99
93_Q	102_A	1.195	0.99
108_K	136_N	1.192	0.99
448_E	452_E	1.184	0.98
87_L	101_Y	1.183	0.98
127_A	134_L	1.155	0.98
293_Q	350_G	1.155	0.98
323_T	500_N	1.154	0.98
89_N	92_A	1.153	0.98
265_R	269_E	1.151	0.98
231_I	236_M	1.147	0.98
244_E	271_A	1.144	0.98
119_I	126_A	1.134	0.98
437_G	440_E	1.124	0.98
363_K	506_R	1.123	0.98
352_L	471_L	1.123	0.98
238_D	264_A	1.120	0.98
279_V	332_V	1.113	0.98
129_E	132_Q	1.108	0.98
331_D	508_F	1.108	0.98
152_E	224_G	1.100	0.97
151_D	155_L	1.098	0.97
413_I	417_I	1.088	0.97
122_N	125_F	1.079	0.97
281_C	355_E	1.074	0.97
468_A	494_L	1.069	0.97
286_G	290_V	1.069	0.97
149_V	224_G	1.064	0.97
341_K	509_I	1.053	0.97
343_I	505_A	1.052	0.97
239_A	243_L	1.045	0.97
370_N	419_E	1.042	0.96
278_V	317_E	1.037	0.96
141_M	174_A	1.033	0.96
293_Q	297_F	1.032	0.96
293_Q	354_D	1.030	0.96
297_F	350_G	1.028	0.96
147_V	224_G	1.026	0.96
342_Y	366_D	1.022	0.96
190_G	215_G	1.021	0.96
180_A	183_F	1.017	0.96
145_D	394_G	1.014	0.96
196_G	202_S	1.014	0.96
87_L	100_R	1.012	0.96
322_H	499_T	1.010	0.96
244_E	268_L	1.006	0.96
156_K	160_H	0.999	0.96
140_V	159_A	0.998	0.96
433_V	437_G	0.993	0.95
108_K	114_S	0.993	0.95
123_G	147_V	0.992	0.95
346_L	416_L	0.989	0.95
116_L	141_M	0.988	0.95
231_I	260_A	0.983	0.95
294_G	354_D	0.979	0.95
438_S	441_D	0.971	0.95
104_I	117_A	0.970	0.95
127_A	151_D	0.969	0.95
126_A	142_L	0.967	0.95
309_V	313_G	0.965	0.95
372_Q	375_P	0.962	0.95
104_I	107_A	0.960	0.94
285_R	321_L	0.957	0.94
377_F	382_I	0.945	0.94
381_D	385_S	0.943	0.94
496_S	500_N	0.942	0.94
109_K	114_S	0.939	0.94
241_G	268_L	0.934	0.94
294_G	298_A	0.932	0.94
201_G	355_E	0.927	0.93
296_Q	302_K	0.926	0.93
149_V	152_E	0.925	0.93
356_T	501_T	0.925	0.93
263_V	267_V	0.923	0.93
253_A	325_N	0.921	0.93
443_V	446_T	0.918	0.93
142_L	166_M	0.917	0.93
244_E	275_R	0.917	0.93
130_A	155_L	0.914	0.93
265_R	317_E	0.910	0.93
331_D	504_L	0.910	0.93
240_I	268_L	0.909	0.93
433_V	438_S	0.905	0.93
374_D	423_P	0.904	0.92
127_A	158_L	0.899	0.92
194_I	205_L	0.897	0.92
159_A	162_K	0.896	0.92
446_T	449_T	0.893	0.92
218_Q	242_M	0.890	0.92
86_E	108_K	0.889	0.92
235_M	238_D	0.888	0.92
297_F	303_E	0.887	0.92
196_G	255_I	0.887	0.92
360_V	502_G	0.879	0.91
132_Q	135_Q	0.878	0.91
235_M	261_P	0.877	0.91
206_S	219_L	0.870	0.91
434_L	442_P	0.869	0.91
285_R	305_A	0.869	0.91
296_Q	301_T	0.868	0.91
422_D	425_V	0.867	0.91
218_Q	249_T	0.867	0.91
446_T	450_I	0.865	0.91
125_F	129_E	0.864	0.91
289_P	361_M	0.863	0.91
294_G	297_F	0.863	0.91
154_A	158_L	0.862	0.91
130_A	159_A	0.857	0.90
140_V	164_L	0.856	0.90
222_T	239_A	0.854	0.90
192_I	329_I	0.853	0.90
467_L	505_A	0.852	0.90
158_L	162_K	0.852	0.90
122_N	144_S	0.849	0.90
423_P	464_L	0.845	0.90
420_A	464_L	0.844	0.90
86_E	114_S	0.844	0.90
380_K	414_S	0.841	0.89
468_A	492_V	0.841	0.89
147_V	151_D	0.840	0.89
109_K	136_N	0.837	0.89
436_F	439_H	0.836	0.89
259_P	308_A	0.836	0.89
286_G	361_M	0.836	0.89
377_F	380_K	0.835	0.89
330_A	488_L	0.835	0.89
120_S	143_F	0.835	0.89
188_R	210_H	0.832	0.89
156_K	159_A	0.831	0.89
497_S	500_N	0.830	0.89
364_H	506_R	0.822	0.88
343_I	427_V	0.821	0.88
131_R	162_K	0.821	0.88
376_E	380_K	0.820	0.88
468_A	487_L	0.818	0.88
86_E	109_K	0.815	0.88
86_E	89_N	0.815	0.88
94_S	98_E	0.813	0.88
427_V	465_I	0.812	0.88
371_I	423_P	0.809	0.88
350_G	392_D	0.809	0.88
414_S	418_E	0.808	0.88
378_R	381_D	0.803	0.87
134_L	137_D	0.801	0.87
431_D	435_G	0.790	0.86
435_G	438_S	0.789	0.86
408_D	411_N	0.789	0.86
132_Q	136_N	0.787	0.86
311_L	315_K	0.785	0.86
240_I	254_L	0.785	0.86
375_P	387_K	0.784	0.86
441_D	445_S	0.781	0.86
486_M	490_A	0.781	0.86
137_D	162_K	0.780	0.86
107_A	138_L	0.779	0.86
506_R	510_C	0.779	0.86
344_R	422_D	0.779	0.86
344_R	370_N	0.777	0.85
170_D	224_G	0.776	0.85
290_V	298_A	0.776	0.85
344_R	368_Y	0.774	0.85
88_F	104_I	0.770	0.85
259_P	265_R	0.767	0.85
282_F	305_A	0.766	0.85
179_A	182_C	0.765	0.85
171_C	293_Q	0.764	0.84
216_V	219_L	0.764	0.84
193_G	218_Q	0.764	0.84
171_C	350_G	0.764	0.84
209_I	326_Q	0.761	0.84
152_E	156_K	0.759	0.84
436_F	440_E	0.759	0.84
179_A	183_F	0.757	0.84
195_V	254_L	0.755	0.84
147_V	152_E	0.754	0.84
191_N	333_R	0.753	0.84
195_V	239_A	0.753	0.84
180_A	348_C	0.752	0.84
222_T	231_I	0.752	0.84
286_G	362_E	0.751	0.83
343_I	501_T	0.747	0.83
320_D	325_N	0.747	0.83
249_T	252_I	0.744	0.83
212_F	330_A	0.744	0.83
90_T	100_R	0.742	0.83
244_E	276_K	0.741	0.83
127_A	131_R	0.740	0.83
447_I	486_M	0.739	0.82
92_A	102_A	0.738	0.82
328_L	507_E	0.737	0.82
436_F	442_P	0.736	0.82
268_L	272_R	0.735	0.82
374_D	377_F	0.735	0.82
80_L	85_E	0.734	0.82
482_Q	485_Q	0.733	0.82
107_A	133_A	0.732	0.82
89_N	122_N	0.732	0.82
220_I	239_A	0.728	0.82
241_G	270_R	0.727	0.81
298_A	350_G	0.727	0.81
135_Q	162_K	0.717	0.81
448_E	451_K	0.715	0.80
282_F	319_L	0.714	0.80
93_Q	99_A	0.713	0.80
119_I	133_A	0.713	0.80
249_T	276_K	0.712	0.80
413_I	452_E	0.712	0.80
291_D	294_G	0.710	0.80
321_L	362_E	0.707	0.80
114_S	137_D	0.706	0.80
138_L	164_L	0.706	0.80
374_D	424_E	0.704	0.79
374_D	418_E	0.703	0.79
94_S	99_A	0.702	0.79
199_G	392_D	0.700	0.79
294_G	299_R	0.700	0.79
445_S	448_E	0.699	0.79
110_H	138_L	0.697	0.79
370_N	374_D	0.695	0.78
298_A	303_E	0.694	0.78
170_D	298_A	0.691	0.78
363_K	503_L	0.689	0.78
236_M	254_L	0.689	0.78
445_S	449_T	0.688	0.78
330_A	334_A	0.688	0.78
350_G	354_D	0.687	0.78
379_L	387_K	0.687	0.78
486_M	489_D	0.686	0.78
484_S	488_L	0.682	0.77
134_L	161_E	0.680	0.77
200_T	395_D	0.678	0.77
196_G	200_T	0.677	0.77
244_E	278_V	0.677	0.77
86_E	133_A	0.676	0.77
104_I	138_L	0.673	0.76
342_Y	368_Y	0.672	0.76
215_G	249_T	0.672	0.76
447_I	453_A	0.671	0.76
160_H	233_G	0.670	0.76
87_L	99_A	0.670	0.76
293_Q	298_A	0.669	0.76
244_E	252_I	0.668	0.76
134_L	159_A	0.667	0.76
417_I	452_E	0.667	0.76
393_F	415_R	0.665	0.75
170_D	297_F	0.664	0.75
237_L	264_A	0.663	0.75
437_G	441_D	0.663	0.75
161_E	164_L	0.660	0.75
130_A	166_M	0.656	0.74
438_S	442_P	0.655	0.74
124_L	151_D	0.655	0.74
240_I	272_R	0.653	0.74
209_I	216_V	0.653	0.74
428_I	450_I	0.652	0.74
283_L	354_D	0.649	0.74
418_E	421_R	0.649	0.74
387_K	391_L	0.648	0.73
443_V	447_I	0.647	0.73
88_F	101_Y	0.647	0.73
359_A	363_K	0.646	0.73
89_N	100_R	0.645	0.73
193_G	277_P	0.645	0.73
382_I	385_S	0.644	0.73
190_G	249_T	0.644	0.73
290_V	350_G	0.641	0.73
298_A	301_T	0.640	0.73
422_D	464_L	0.640	0.73
447_I	450_I	0.638	0.72
328_L	504_L	0.637	0.72
86_E	107_A	0.634	0.72
146_N	149_V	0.634	0.72
357_M	360_V	0.634	0.72
114_S	138_L	0.634	0.72
417_I	461_G	0.634	0.72
344_R	416_L	0.633	0.72
290_V	297_F	0.633	0.72
146_N	298_A	0.632	0.72
147_V	169_P	0.632	0.72
434_L	439_H	0.632	0.72
448_E	485_Q	0.631	0.71
373_P	376_E	0.631	0.71
436_F	441_D	0.630	0.71
307_K	311_L	0.629	0.71
368_Y	424_E	0.628	0.71
293_Q	299_R	0.627	0.71
378_R	387_K	0.627	0.71
195_V	222_T	0.627	0.71
343_I	365_G	0.624	0.71
235_M	264_A	0.623	0.71
296_Q	300_G	0.622	0.70
158_L	161_E	0.622	0.70
313_G	510_C	0.622	0.70
451_K	486_M	0.621	0.70
444_G	486_M	0.621	0.70
345_G	356_T	0.621	0.70
81_L	85_E	0.620	0.70
343_I	502_G	0.620	0.70
176_I	242_M	0.619	0.70
170_D	350_G	0.619	0.70
145_D	384_R	0.618	0.70
125_F	128_R	0.616	0.70
170_D	294_G	0.614	0.69
255_I	283_L	0.614	0.69
434_L	438_S	0.613	0.69
276_K	313_G	0.612	0.69
289_P	292_E	0.611	0.69
293_Q	386_I	0.611	0.69
243_L	252_I	0.610	0.69
149_V	298_A	0.610	0.69
126_A	144_S	0.610	0.69
335_R	508_F	0.608	0.69
294_G	303_E	0.606	0.68
319_L	322_H	0.606	0.68
172_G	203_Q	0.604	0.68
202_S	395_D	0.604	0.68
144_S	171_C	0.602	0.68
290_V	302_K	0.599	0.68
373_P	377_F	0.599	0.68
437_G	442_P	0.599	0.68
348_C	397_D	0.598	0.67
200_T	348_C	0.598	0.67
97_H	100_R	0.596	0.67
292_E	388_H	0.596	0.67
262_A	311_L	0.594	0.67
439_H	442_P	0.594	0.67
284_D	298_A	0.594	0.67
149_V	170_D	0.592	0.67
151_D	154_A	0.592	0.67
449_T	452_E	0.591	0.67
435_G	439_H	0.591	0.67
359_A	503_L	0.591	0.67
290_V	293_Q	0.590	0.66
433_V	442_P	0.590	0.66
449_T	453_A	0.589	0.66
243_L	249_T	0.587	0.66
294_G	300_G	0.586	0.66
349_G	394_G	0.586	0.66
202_S	221_G	0.585	0.66
258_P	303_E	0.585	0.66
431_D	436_F	0.583	0.65
196_G	394_G	0.582	0.65
427_V	509_I	0.582	0.65
447_I	452_E	0.582	0.65
444_G	447_I	0.582	0.65
434_L	440_E	0.581	0.65
437_G	443_V	0.581	0.65
397_D	411_N	0.581	0.65
412_R	430_M	0.580	0.65
83_E	89_N	0.580	0.65
435_G	440_E	0.579	0.65
467_L	508_F	0.579	0.65
224_G	298_A	0.577	0.65
284_D	297_F	0.577	0.65
146_N	170_D	0.576	0.65
178_G	218_Q	0.575	0.64
444_G	449_T	0.575	0.64
175_I	192_I	0.574	0.64
294_G	350_G	0.574	0.64
432_F	436_F	0.574	0.64
359_A	362_E	0.573	0.64
144_S	147_V	0.572	0.64
177_N	428_I	0.572	0.64
287_E	361_M	0.572	0.64
134_L	155_L	0.572	0.64
131_R	134_L	0.571	0.64
122_N	199_G	0.570	0.64
251_I	329_I	0.570	0.64
432_F	438_S	0.569	0.64
473_T	496_S	0.568	0.63
233_G	495_A	0.567	0.63
172_G	348_C	0.567	0.63
284_D	303_E	0.566	0.63
442_P	446_T	0.565	0.63
451_K	490_A	0.564	0.63
440_E	444_G	0.563	0.63
334_A	430_M	0.563	0.63
293_Q	353_C	0.563	0.63
251_I	279_V	0.562	0.63
303_E	350_G	0.562	0.63
269_E	336_L	0.560	0.62
357_M	367_V	0.557	0.62
452_E	455_A	0.555	0.62
351_T	395_D	0.555	0.62
484_S	496_S	0.554	0.62
324_L	507_E	0.553	0.61
252_I	277_P	0.551	0.61
287_E	292_E	0.551	0.61
170_D	199_G	0.551	0.61
207_V	472_G	0.550	0.61
346_L	415_R	0.550	0.61
145_D	200_T	0.548	0.61
153_L	231_I	0.547	0.61
281_C	325_N	0.547	0.61
177_N	189_R	0.547	0.61
200_T	352_L	0.545	0.60
258_P	299_R	0.544	0.60
94_S	510_C	0.544	0.60
170_D	299_R	0.544	0.60
336_L	462_R	0.544	0.60
231_I	349_G	0.543	0.60
431_D	437_G	0.540	0.60
217_S	242_M	0.540	0.60
126_A	130_A	0.540	0.60
240_I	278_V	0.539	0.59
368_Y	371_I	0.539	0.59
325_N	329_I	0.535	0.59
194_I	253_A	0.534	0.59
375_P	388_H	0.533	0.59
104_I	164_L	0.533	0.59
369_S	425_V	0.532	0.58
450_I	454_K	0.531	0.58
145_D	298_A	0.530	0.58
172_G	200_T	0.530	0.58
170_D	257_K	0.530	0.58
292_E	369_S	0.530	0.58
297_F	300_G	0.527	0.58
451_K	489_D	0.527	0.58
155_L	160_H	0.527	0.58
297_F	358_F	0.526	0.58
290_V	294_G	0.525	0.57
375_P	385_S	0.525	0.57
235_M	306_L	0.524	0.57
481_E	485_Q	0.524	0.57
318_N	507_E	0.524	0.57
87_L	103_T	0.524	0.57
205_L	258_P	0.523	0.57
376_E	379_L	0.523	0.57
251_I	332_V	0.522	0.57
367_V	391_L	0.522	0.57
286_G	291_D	0.522	0.57
446_T	452_E	0.521	0.57
345_G	367_V	0.520	0.57
415_R	419_E	0.518	0.56
85_E	88_F	0.518	0.56
344_R	367_V	0.517	0.56
120_S	144_S	0.517	0.56
183_F	199_G	0.517	0.56
386_I	391_L	0.517	0.56
286_G	289_P	0.516	0.56
155_L	164_L	0.516	0.56
368_Y	422_D	0.516	0.56
183_F	200_T	0.515	0.56
200_T	349_G	0.513	0.56
369_S	375_P	0.513	0.56
170_D	183_F	0.510	0.55
437_G	446_T	0.509	0.55
323_T	497_S	0.509	0.55
366_D	489_D	0.509	0.55
241_G	267_V	0.509	0.55
187_V	200_T	0.508	0.55
142_L	159_A	0.507	0.55
192_I	209_I	0.507	0.55
485_Q	488_L	0.506	0.55
465_I	468_A	0.505	0.55
432_F	437_G	0.504	0.54
307_K	314_V	0.504	0.54
140_V	162_K	0.504	0.54
121_V	183_F	0.503	0.54
310_M	319_L	0.503	0.54
101_Y	107_A	0.502	0.54
172_G	196_G	0.502	0.54
301_T	304_A	0.501	0.54
155_L	166_M	0.501	0.54
156_K	163_G	0.501	0.54
379_L	382_I	0.501	0.54
264_A	268_L	0.500	0.54

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2csuA	2	0.8039	100	0.434	Contact Map
3dmyA	2	0.7359	100	0.476	Contact Map
3pffA	2	0.5748	100	0.636	Contact Map
3mwdB	1	0.5359	100	0.643	Contact Map
2fp4A	1	0.5553	100	0.687	Contact Map
2nu8A	1	0.5243	100	0.689	Contact Map
2yv1A	1	0.4893	100	0.69	Contact Map
1oi7A	1	0.501	100	0.696	Contact Map
2yv2A	1	0.4913	100	0.699	Contact Map
3ff4A	1	0.2175	99.8	0.874	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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