MNMC - ECOLI - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

MNMC - tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC

UniProt:	P77182	Sequences: MKHYSIQPANLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLGGNQLEVRFPEHPHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSAGFVRRGLQDAGFTMQKRKGFGRKREMLCGVMEQTLPLPCSAPWFNRTGSSKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPVKFDHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNLSRKDDCWLLNFAGDQQATHSVVVLANGHQISRFSQTSTLPVYSVAGQVSHIPTTPELAELKQVLCYDGYLTPQNPANQHHCIGASYHRGSEDTAYSEDDQQQNRQRLIDCFPQAQWAKEVDVSDKEARCGVRCATRDHLPMVGNVPDYEATLVEYASLAEQKDEAVSAPVFDDLFMFAALGSRGLCSAPLCAEILAAQMSDEPIPMDASTLAALNPNRLWVRKLLKGKAVKAG	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG14114
Length:	668 (630)
Sequences:	929 (664)
Seq/√Len:	26.4

ECOLI - MNMC

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
76_L	176_F	6.400	1.00
214_G	218_R	6.088	1.00
525_S	531_S	5.208	1.00
435_L	457_V	5.111	1.00
24_F	103_F	5.016	1.00
373_P	376_L	4.524	1.00
268_A	444_L	4.461	1.00
267_A	288_W	4.339	1.00
33_N	36_E	3.639	1.00
286_R	637_E	3.631	1.00
292_L	416_L	3.616	1.00
612_F	615_L	3.458	1.00
62_V	76_L	3.449	1.00
333_A	337_Y	3.449	1.00
39_R	119_E	3.296	1.00
201_A	205_G	3.259	1.00
535_Q	562_A	3.221	1.00
293_Y	454_H	3.190	1.00
207_L	242_G	3.173	1.00
81_D	123_W	3.120	1.00
279_L	612_F	3.041	1.00
522_H	534_D	3.026	1.00
299_P	416_L	3.018	1.00
461_N	465_I	2.940	1.00
442_W	609_L	2.921	1.00
272_G	299_P	2.834	1.00
305_G	563_R	2.821	1.00
480_A	534_D	2.775	1.00
352_T	385_V	2.772	1.00
48_L	60_F	2.769	1.00
421_Q	424_L	2.714	0.99
73_F	97_F	2.702	0.99
570_T	614_A	2.667	0.99
629_I	646_L	2.635	0.99
266_E	289_Q	2.590	0.99
378_V	384_A	2.584	0.99
268_A	293_Y	2.572	0.99
157_I	188_M	2.559	0.99
577_V	626_C	2.527	0.99
138_C	153_W	2.465	0.99
46_N	206_T	2.444	0.99
47_Q	50_V	2.427	0.99
381_E	384_A	2.425	0.99
288_W	635_S	2.416	0.99
196_A	199_R	2.405	0.99
306_N	563_R	2.395	0.99
35_L	75_T	2.382	0.99
629_I	639_I	2.374	0.99
372_L	376_L	2.359	0.98
380_V	388_I	2.350	0.98
277_A	412_T	2.340	0.98
307_R	483_V	2.295	0.98
39_R	78_Q	2.293	0.98
132_P	139_H	2.245	0.98
432_L	446_F	2.239	0.98
114_H	128_Q	2.190	0.97
291_T	427_Y	2.169	0.97
307_R	485_H	2.166	0.97
98_I	172_V	2.165	0.97
296_D	302_G	2.154	0.97
629_I	641_M	2.137	0.97
126_Q	143_L	2.134	0.97
77_W	148_V	2.133	0.97
380_V	385_V	2.132	0.97
295_A	431_Q	2.121	0.97
207_L	227_M	2.121	0.97
284_L	424_L	2.117	0.97
81_D	144_D	2.112	0.97
432_L	444_L	2.110	0.97
233_F	239_M	2.106	0.97
465_I	613_A	2.098	0.97
568_C	614_A	2.080	0.97
29_F	37_E	2.076	0.97
471_T	580_V	2.061	0.96
351_V	498_V	2.007	0.96
155_G	160_L	1.947	0.95
268_A	454_H	1.906	0.94
266_E	455_S	1.889	0.94
174_A	206_T	1.883	0.94
208_A	239_M	1.880	0.94
35_L	119_E	1.878	0.94
213_A	219_G	1.873	0.94
279_L	458_V	1.864	0.94
480_A	564_C	1.837	0.93
213_A	237_R	1.822	0.93
37_E	210_F	1.810	0.93
286_R	628_E	1.786	0.92
329_A	333_A	1.780	0.92
459_L	465_I	1.776	0.92
658_K	661_K	1.773	0.92
438_K	441_C	1.770	0.92
468_F	471_T	1.769	0.92
63_A	175_W	1.764	0.92
265_R	288_W	1.757	0.91
73_F	150_L	1.755	0.91
78_Q	176_F	1.745	0.91
29_F	38_T	1.740	0.91
349_C	498_V	1.735	0.91
484_S	535_Q	1.735	0.91
531_S	534_D	1.715	0.90
35_L	120_L	1.713	0.90
226_T	245_E	1.712	0.90
51_R	206_T	1.708	0.90
309_G	620_L	1.682	0.90
140_R	151_D	1.673	0.89
281_L	285_R	1.671	0.89
197_M	207_L	1.666	0.89
579_N	650_N	1.658	0.89
530_Y	560_K	1.657	0.89
46_N	239_M	1.656	0.89
352_T	389_T	1.646	0.88
324_R	642_D	1.645	0.88
267_A	456_V	1.627	0.88
202_R	205_G	1.626	0.88
279_L	627_A	1.624	0.88
389_T	393_T	1.616	0.88
501_Y	545_C	1.614	0.87
46_N	51_R	1.607	0.87
276_S	294_C	1.597	0.87
437_R	441_C	1.597	0.87
286_R	631_A	1.592	0.87
63_A	172_V	1.587	0.87
180_F	236_K	1.574	0.86
306_N	519_A	1.571	0.86
161_T	198_A	1.570	0.86
60_F	174_A	1.568	0.86
312_Y	500_C	1.564	0.86
87_H	91_Q	1.560	0.86
521_Y	617_S	1.560	0.86
34_G	71_L	1.557	0.85
530_Y	535_Q	1.547	0.85
269_I	279_L	1.539	0.85
178_D	185_N	1.534	0.85
324_R	644_S	1.524	0.84
107_R	111_A	1.520	0.84
40_Y	239_M	1.513	0.84
352_T	380_V	1.494	0.83
14_N	31_N	1.491	0.83
272_G	416_L	1.482	0.82
182_P	185_N	1.482	0.82
284_L	423_G	1.476	0.82
310_A	498_V	1.463	0.82
277_A	292_L	1.457	0.81
27_V	39_R	1.440	0.81
175_W	201_A	1.439	0.81
294_C	426_I	1.430	0.80
436_S	443_L	1.428	0.80
480_A	531_S	1.428	0.80
399_T	497_Q	1.398	0.79
295_A	464_Q	1.396	0.78
215_F	218_R	1.389	0.78
179_G	185_N	1.384	0.78
217_R	227_M	1.384	0.78
130_Q	335_R	1.379	0.78
180_F	185_N	1.369	0.77
299_P	428_Y	1.362	0.77
390_G	496_K	1.358	0.76
308_Q	312_Y	1.356	0.76
185_N	236_K	1.356	0.76
385_V	388_I	1.355	0.76
255_P	258_N	1.354	0.76
113_A	210_F	1.349	0.76
69_T	113_A	1.349	0.76
45_G	230_R	1.347	0.76
228_Q	243_V	1.344	0.76
268_A	457_V	1.342	0.76
96_H	151_D	1.341	0.76
52_F	60_F	1.336	0.75
191_Q	195_N	1.330	0.75
180_F	189_W	1.320	0.74
332_F	458_V	1.314	0.74
48_L	52_F	1.314	0.74
69_T	210_F	1.310	0.74
37_E	69_T	1.310	0.74
138_C	151_D	1.308	0.74
179_G	236_K	1.300	0.73
521_Y	569_A	1.294	0.73
477_Y	573_H	1.291	0.73
269_I	458_V	1.288	0.73
194_F	219_G	1.285	0.72
292_L	424_L	1.284	0.72
272_G	276_S	1.277	0.72
334_R	338_D	1.276	0.72
254_A	257_F	1.273	0.72
313_P	330_F	1.272	0.72
345_D	410_E	1.270	0.71
284_L	421_Q	1.267	0.71
357_D	360_S	1.266	0.71
35_L	39_R	1.261	0.71
444_L	457_V	1.258	0.71
209_T	229_K	1.255	0.71
209_T	236_K	1.255	0.71
325_F	329_A	1.252	0.70
45_G	131_W	1.249	0.70
218_R	222_D	1.248	0.70
77_W	123_W	1.247	0.70
163_Q	644_S	1.242	0.70
288_W	455_S	1.240	0.70
178_D	209_T	1.237	0.69
185_N	213_A	1.237	0.69
100_F	157_I	1.229	0.69
185_N	209_T	1.228	0.69
179_G	182_P	1.228	0.69
74_L	124_A	1.224	0.69
569_A	649_L	1.215	0.68
484_S	539_R	1.210	0.68
43_L	79_A	1.209	0.68
315_L	624_P	1.207	0.67
188_M	193_L	1.206	0.67
182_P	232_G	1.203	0.67
314_L	479_V	1.196	0.67
232_G	237_R	1.188	0.66
506_T	515_H	1.182	0.66
405_W	500_C	1.181	0.66
382_A	386_E	1.166	0.65
20_V	25_D	1.166	0.65
459_L	471_T	1.155	0.64
483_V	563_R	1.152	0.64
632_A	637_E	1.150	0.64
64_E	72_N	1.148	0.63
207_L	217_R	1.144	0.63
19_P	34_G	1.144	0.63
211_T	242_G	1.136	0.63
211_T	218_R	1.127	0.62
326_F	622_S	1.125	0.62
610_F	634_M	1.114	0.61
194_F	215_F	1.112	0.61
29_F	210_F	1.111	0.61
500_C	516_C	1.110	0.61
142_L	332_F	1.108	0.61
385_V	389_T	1.106	0.61
309_G	516_C	1.104	0.60
380_V	384_A	1.101	0.60
12_E	22_R	1.098	0.60
314_L	573_H	1.093	0.60
269_I	280_S	1.093	0.60
495_L	515_H	1.088	0.59
179_G	189_W	1.088	0.59
178_D	236_K	1.085	0.59
332_F	627_A	1.080	0.59
593_L	596_Q	1.080	0.59
36_E	39_R	1.077	0.58
34_G	37_E	1.073	0.58
126_Q	129_A	1.070	0.58
87_H	93_Q	1.070	0.58
626_C	629_I	1.063	0.57
100_F	160_L	1.062	0.57
215_F	219_G	1.059	0.57
386_E	393_T	1.059	0.57
330_F	334_R	1.058	0.57
74_L	127_L	1.058	0.57
140_R	628_E	1.056	0.57
438_K	453_T	1.053	0.57
386_E	389_T	1.052	0.57
325_F	622_S	1.052	0.57
66_G	101_E	1.051	0.57
229_K	236_K	1.051	0.57
185_N	189_W	1.048	0.56
627_A	631_A	1.045	0.56
178_D	182_P	1.039	0.56
189_W	236_K	1.035	0.55
121_A	125_E	1.034	0.55
615_L	626_C	1.033	0.55
370_M	374_A	1.030	0.55
479_V	523_R	1.028	0.55
499_L	614_A	1.028	0.55
277_A	416_L	1.028	0.55
32_D	235_R	1.027	0.55
506_T	516_C	1.026	0.55
81_D	148_V	1.025	0.55
529_A	533_D	1.024	0.55
180_F	232_G	1.024	0.55
302_G	566_V	1.022	0.54
308_Q	500_C	1.021	0.54
274_I	623_A	1.021	0.54
530_Y	562_A	1.017	0.54
632_A	640_P	1.012	0.54
37_E	175_W	1.009	0.53
460_A	465_I	1.007	0.53
590_Y	650_N	1.006	0.53
372_L	375_E	1.003	0.53
141_L	627_A	1.000	0.53
309_G	563_R	1.000	0.53
654_L	657_R	1.000	0.53
274_I	293_Y	0.999	0.53
153_W	160_L	0.996	0.53
29_F	69_T	0.995	0.52
425_Q	540_Q	0.994	0.52
475_P	654_L	0.993	0.52
191_Q	222_D	0.992	0.52
232_G	236_K	0.991	0.52
124_A	128_Q	0.989	0.52
282_A	534_D	0.985	0.52
570_T	610_F	0.985	0.52
185_N	237_R	0.982	0.51
213_A	233_F	0.982	0.51
432_L	452_A	0.981	0.51
284_L	422_Q	0.979	0.51
520_S	534_D	0.976	0.51
277_A	415_V	0.975	0.51
268_A	455_S	0.975	0.51
229_K	237_R	0.973	0.51
516_C	519_A	0.972	0.51
319_D	324_R	0.969	0.50
293_Y	432_L	0.969	0.50
213_A	236_K	0.968	0.50
109_D	112_L	0.968	0.50
185_N	232_G	0.967	0.50
132_P	141_L	0.964	0.50
50_V	270_I	0.963	0.50
99_S	150_L	0.963	0.50
26_D	236_K	0.961	0.50
464_Q	467_R	0.961	0.50
311_L	621_C	0.960	0.50
102_K	330_F	0.959	0.50
487_P	556_D	0.959	0.50
38_T	75_T	0.958	0.50
190_T	197_M	0.958	0.50
40_Y	45_G	0.956	0.50
292_L	426_I	0.955	0.49
180_F	209_T	0.954	0.49
639_I	646_L	0.953	0.49
99_S	152_L	0.953	0.49
189_W	209_T	0.952	0.49
50_V	448_G	0.952	0.49
212_S	227_M	0.952	0.49
34_G	210_F	0.949	0.49
306_N	309_G	0.948	0.49
469_S	472_S	0.947	0.49
178_D	213_A	0.945	0.49
47_Q	230_R	0.945	0.49
297_E	429_Q	0.945	0.49
130_Q	143_L	0.944	0.49
62_V	614_A	0.942	0.48
209_T	216_V	0.936	0.48
78_Q	82_Q	0.934	0.48
179_G	209_T	0.932	0.48
614_A	626_C	0.932	0.48
182_P	213_A	0.931	0.48
294_C	298_A	0.928	0.47
306_N	538_N	0.927	0.47
385_V	393_T	0.926	0.47
52_F	335_R	0.926	0.47
440_D	457_V	0.924	0.47
487_P	559_D	0.924	0.47
589_E	601_V	0.923	0.47
64_E	185_N	0.922	0.47
126_Q	144_D	0.922	0.47
231_K	238_E	0.920	0.47
213_A	216_V	0.919	0.47
184_K	216_V	0.912	0.46
535_Q	559_D	0.910	0.46
185_N	229_K	0.906	0.46
182_P	236_K	0.903	0.46
308_Q	405_W	0.899	0.45
14_N	20_V	0.895	0.45
52_F	80_F	0.894	0.45
178_D	189_W	0.893	0.45
492_L	515_H	0.893	0.45
526_E	566_V	0.892	0.45
211_T	216_V	0.891	0.45
77_W	81_D	0.889	0.45
46_N	242_G	0.887	0.44
312_Y	351_V	0.881	0.44
218_R	238_E	0.880	0.44
272_G	294_C	0.875	0.44
309_G	519_A	0.873	0.43
212_S	240_L	0.872	0.43
572_D	653_R	0.871	0.43
130_Q	141_L	0.866	0.43
365_A	458_V	0.865	0.43
131_W	396_S	0.864	0.43
528_T	564_C	0.860	0.42
172_V	200_L	0.858	0.42
270_I	444_L	0.856	0.42
479_V	573_H	0.854	0.42
483_V	506_T	0.854	0.42
210_F	312_Y	0.850	0.42
579_N	608_D	0.850	0.42
519_A	538_N	0.848	0.42
642_D	645_T	0.847	0.41
280_S	292_L	0.846	0.41
316_S	363_K	0.846	0.41
49_E	76_L	0.844	0.41
336_F	340_L	0.844	0.41
162_S	627_A	0.843	0.41
481_G	565_G	0.840	0.41
185_N	210_F	0.840	0.41
94_R	637_E	0.839	0.41
26_D	185_N	0.837	0.41
36_E	44_G	0.836	0.41
26_D	182_P	0.831	0.40
571_R	655_W	0.830	0.40
309_G	474_L	0.830	0.40
329_A	612_F	0.830	0.40
267_A	635_S	0.829	0.40
26_D	213_A	0.829	0.40
266_E	291_T	0.829	0.40
615_L	622_S	0.827	0.40
282_A	628_E	0.825	0.40
306_N	572_D	0.822	0.40
345_D	509_N	0.820	0.40
35_L	77_W	0.820	0.40
143_L	154_F	0.819	0.39
389_T	497_Q	0.817	0.39
131_W	205_G	0.817	0.39
43_L	49_E	0.816	0.39
633_Q	646_L	0.816	0.39
50_V	54_E	0.816	0.39
22_R	190_T	0.814	0.39
190_T	193_L	0.812	0.39
456_V	608_D	0.811	0.39
577_V	629_I	0.809	0.39
480_A	525_S	0.808	0.39
125_E	129_A	0.808	0.39
207_L	617_S	0.806	0.39
103_F	187_D	0.806	0.39
231_K	241_C	0.805	0.38
106_T	109_D	0.805	0.38
66_G	232_G	0.805	0.38
108_A	111_A	0.805	0.38
200_L	625_L	0.804	0.38
64_E	236_K	0.802	0.38
64_E	180_F	0.798	0.38
437_R	607_D	0.797	0.38
278_L	336_F	0.797	0.38
131_W	319_D	0.796	0.38
126_Q	146_G	0.795	0.38
144_D	148_V	0.794	0.38
24_F	187_D	0.793	0.38
189_W	232_G	0.793	0.38
303_A	462_G	0.793	0.38
443_L	453_T	0.790	0.37
64_E	101_E	0.789	0.37
182_P	237_R	0.789	0.37
577_V	649_L	0.787	0.37
540_Q	543_I	0.787	0.37
179_G	232_G	0.787	0.37
480_A	522_H	0.786	0.37
210_F	236_K	0.786	0.37
161_T	618_R	0.786	0.37
48_L	381_E	0.786	0.37
264_K	288_W	0.785	0.37
522_H	531_S	0.785	0.37
38_T	210_F	0.784	0.37
312_Y	507_P	0.784	0.37
26_D	178_D	0.784	0.37
199_R	403_G	0.784	0.37
380_V	527_D	0.781	0.37
577_V	612_F	0.780	0.37
26_D	180_F	0.778	0.37
573_H	618_R	0.776	0.36
577_V	630_L	0.775	0.36
87_H	92_L	0.772	0.36
314_L	360_S	0.770	0.36
67_F	73_F	0.769	0.36
197_M	223_A	0.767	0.36
97_F	209_T	0.767	0.36
60_F	239_M	0.767	0.36
284_L	292_L	0.767	0.36
618_R	657_R	0.765	0.36
25_D	145_E	0.761	0.35
312_Y	573_H	0.759	0.35
100_F	153_W	0.759	0.35
196_A	200_L	0.758	0.35
269_I	646_L	0.758	0.35
265_R	635_S	0.758	0.35
456_V	610_F	0.758	0.35
275_A	382_A	0.757	0.35
10_N	23_D	0.757	0.35
214_G	217_R	0.755	0.35
33_N	37_E	0.754	0.35
521_Y	571_R	0.752	0.35
522_H	566_V	0.751	0.35
286_R	635_S	0.750	0.35
120_L	214_G	0.750	0.35
66_G	185_N	0.750	0.35
66_G	72_N	0.748	0.35
282_A	640_P	0.747	0.34
12_E	23_D	0.746	0.34
51_R	174_A	0.746	0.34
77_W	146_G	0.746	0.34
137_G	637_E	0.746	0.34
190_T	194_F	0.746	0.34
312_Y	624_P	0.742	0.34
179_G	188_M	0.740	0.34
256_W	259_R	0.739	0.34
210_F	213_A	0.739	0.34
272_G	426_I	0.739	0.34
313_P	573_H	0.738	0.34
267_A	454_H	0.737	0.34
628_E	631_A	0.737	0.34
145_E	458_V	0.737	0.34
27_V	30_S	0.737	0.34
149_T	610_F	0.736	0.34
182_P	189_W	0.735	0.34
274_I	620_L	0.734	0.34
580_V	609_L	0.734	0.34
488_T	492_L	0.733	0.34
189_W	216_V	0.733	0.34
124_A	380_V	0.732	0.33
353_Q	400_Y	0.732	0.33
484_S	519_A	0.731	0.33
211_T	237_R	0.730	0.33
326_F	573_H	0.729	0.33
14_N	18_T	0.729	0.33
217_R	221_Q	0.728	0.33
596_Q	599_E	0.727	0.33
64_E	209_T	0.727	0.33
102_K	239_M	0.727	0.33
618_R	625_L	0.727	0.33
50_V	53_P	0.726	0.33
103_F	210_F	0.725	0.33
63_A	212_S	0.725	0.33
370_M	376_L	0.725	0.33
180_F	211_T	0.724	0.33
293_Y	430_Y	0.724	0.33
157_I	196_A	0.723	0.33
393_T	396_S	0.723	0.33
337_Y	406_L	0.723	0.33
76_L	97_F	0.723	0.33
81_D	87_H	0.722	0.33
589_E	604_P	0.719	0.33
140_R	286_R	0.718	0.33
270_I	457_V	0.718	0.33
332_F	461_N	0.717	0.32
34_G	117_W	0.716	0.32
28_Y	180_F	0.715	0.32
643_A	647_A	0.714	0.32
380_V	389_T	0.713	0.32
11_L	21_S	0.712	0.32
134_P	139_H	0.711	0.32
430_Y	446_F	0.710	0.32
269_I	284_L	0.710	0.32
590_Y	593_L	0.709	0.32
57_H	202_R	0.708	0.32
72_N	232_G	0.708	0.32
39_R	75_T	0.707	0.32
462_G	621_C	0.707	0.32
501_Y	617_S	0.706	0.32
594_A	659_L	0.706	0.32
217_R	232_G	0.705	0.32
401_P	495_L	0.704	0.32
34_G	69_T	0.704	0.32
355_G	361_Q	0.703	0.32
209_T	213_A	0.702	0.32
389_T	495_L	0.701	0.31
628_E	637_E	0.700	0.31
201_A	241_C	0.699	0.31
178_D	188_M	0.699	0.31
432_L	461_N	0.699	0.31
546_F	639_I	0.699	0.31
40_Y	231_K	0.698	0.31
182_P	229_K	0.698	0.31
268_A	456_V	0.697	0.31
52_F	57_H	0.697	0.31
77_W	144_D	0.696	0.31
185_N	188_M	0.694	0.31
268_A	274_I	0.694	0.31
523_R	573_H	0.690	0.31
50_V	439_D	0.689	0.31
193_L	210_F	0.688	0.31
47_Q	243_V	0.688	0.31
574_L	648_A	0.687	0.31
407_C	617_S	0.687	0.31
326_F	618_R	0.687	0.31
270_I	459_L	0.686	0.30
329_A	337_Y	0.686	0.30
155_G	159_E	0.685	0.30
293_Y	452_A	0.685	0.30
213_A	234_G	0.685	0.30
489_T	515_H	0.685	0.30
571_R	654_L	0.684	0.30
312_Y	405_W	0.684	0.30
349_C	500_C	0.682	0.30
576_M	650_N	0.682	0.30
436_S	445_N	0.681	0.30
73_F	148_V	0.681	0.30
140_R	149_T	0.681	0.30
98_I	577_V	0.678	0.30
132_P	154_F	0.677	0.30
277_A	377_A	0.677	0.30
505_L	515_H	0.676	0.30
178_D	237_R	0.676	0.30
138_C	642_D	0.675	0.30
309_G	565_G	0.675	0.30
435_L	570_T	0.675	0.30
610_F	631_A	0.675	0.30
154_F	309_G	0.674	0.30
325_F	649_L	0.673	0.30
179_G	229_K	0.671	0.30
260_T	536_Q	0.671	0.30
309_G	634_M	0.670	0.29
435_L	442_W	0.670	0.29
75_T	119_E	0.668	0.29
438_K	443_L	0.668	0.29
210_F	232_G	0.667	0.29
255_P	259_R	0.666	0.29
437_R	442_W	0.666	0.29
72_N	185_N	0.665	0.29
181_A	217_R	0.664	0.29
477_Y	569_A	0.664	0.29
33_N	38_T	0.664	0.29
443_L	451_Q	0.664	0.29
69_T	211_T	0.662	0.29
181_A	214_G	0.662	0.29
105_L	113_A	0.660	0.29
352_T	399_T	0.660	0.29
281_L	424_L	0.659	0.29
295_A	302_G	0.657	0.29
40_Y	212_S	0.657	0.29
380_V	397_G	0.655	0.29
108_A	490_P	0.654	0.29
183_A	601_V	0.654	0.29
33_N	40_Y	0.653	0.28
521_Y	541_R	0.652	0.28
36_E	205_G	0.651	0.28
66_G	182_P	0.651	0.28
182_P	188_M	0.650	0.28
403_G	506_T	0.649	0.28
192_N	195_N	0.649	0.28
189_W	213_A	0.647	0.28
29_F	34_G	0.646	0.28
519_A	572_D	0.645	0.28
293_Y	571_R	0.645	0.28
179_G	237_R	0.645	0.28
40_Y	46_N	0.643	0.28
20_V	31_N	0.643	0.28
180_F	214_G	0.643	0.28
123_W	126_Q	0.643	0.28
178_D	211_T	0.642	0.28
265_R	417_E	0.642	0.28
320_E	477_Y	0.641	0.28
194_F	197_M	0.640	0.28
178_D	214_G	0.640	0.28
500_C	507_P	0.639	0.28
186_P	242_G	0.638	0.28
211_T	219_G	0.638	0.28
312_Y	516_C	0.637	0.27
31_N	181_A	0.636	0.27
311_L	370_M	0.635	0.27
159_E	205_G	0.634	0.27
67_F	70_G	0.633	0.27
64_E	232_G	0.633	0.27
319_D	327_S	0.633	0.27
64_E	178_D	0.633	0.27
153_W	501_Y	0.632	0.27
568_C	617_S	0.632	0.27
405_W	480_A	0.630	0.27
570_T	616_G	0.630	0.27
593_L	656_V	0.630	0.27
46_N	60_F	0.629	0.27
213_A	232_G	0.629	0.27
131_W	521_Y	0.629	0.27
279_L	577_V	0.629	0.27
46_N	174_A	0.628	0.27
427_Y	430_Y	0.628	0.27
50_V	263_S	0.627	0.27
80_F	188_M	0.627	0.27
130_Q	340_L	0.625	0.27
100_F	161_T	0.624	0.27
334_R	524_G	0.623	0.27
26_D	34_G	0.623	0.27
61_V	457_V	0.622	0.27
180_F	213_A	0.622	0.27
297_E	436_S	0.621	0.27
470_Q	606_F	0.621	0.27
193_L	219_G	0.621	0.27
361_Q	458_V	0.621	0.27
142_L	146_G	0.620	0.26
87_H	327_S	0.618	0.26
509_N	512_N	0.618	0.26
52_F	621_C	0.618	0.26
103_F	145_E	0.617	0.26
530_Y	564_C	0.617	0.26
226_T	243_V	0.616	0.26
485_H	516_C	0.615	0.26
26_D	37_E	0.614	0.26
312_Y	498_V	0.614	0.26
474_L	626_C	0.613	0.26
183_A	453_T	0.613	0.26
185_N	214_G	0.612	0.26
105_L	474_L	0.612	0.26
315_L	367_M	0.612	0.26
334_R	337_Y	0.612	0.26
188_M	214_G	0.612	0.26
25_D	184_K	0.611	0.26
272_G	337_Y	0.610	0.26
24_F	63_A	0.609	0.26
407_C	410_E	0.609	0.26
212_S	238_E	0.608	0.26
180_F	188_M	0.607	0.26
217_R	240_L	0.606	0.26
42_F	97_F	0.606	0.26
210_F	219_G	0.606	0.26
431_Q	447_A	0.606	0.26
26_D	179_G	0.605	0.26
110_L	141_L	0.604	0.26
295_A	309_G	0.603	0.26
258_N	269_I	0.602	0.25
189_W	234_G	0.601	0.25
272_G	292_L	0.601	0.25
48_L	79_A	0.600	0.25
129_A	219_G	0.599	0.25
519_A	542_L	0.598	0.25
83_F	92_L	0.598	0.25
408_P	504_Y	0.597	0.25
198_A	244_M	0.597	0.25
316_S	377_A	0.596	0.25
405_W	474_L	0.596	0.25
214_G	236_K	0.596	0.25
592_S	599_E	0.595	0.25
322_L	534_D	0.594	0.25
29_F	33_N	0.594	0.25
29_F	175_W	0.593	0.25
576_M	654_L	0.592	0.25
329_A	406_L	0.591	0.25
264_K	635_S	0.590	0.25
254_A	661_K	0.590	0.25
316_S	573_H	0.590	0.25
210_F	237_R	0.589	0.25
178_D	210_F	0.589	0.25
65_S	157_I	0.587	0.25
233_F	236_K	0.587	0.25
484_S	538_N	0.587	0.25
214_G	232_G	0.587	0.25
206_T	242_G	0.587	0.25
478_S	632_A	0.587	0.25
605_V	650_N	0.586	0.25
229_K	238_E	0.585	0.24
52_F	87_H	0.585	0.24
213_A	229_K	0.585	0.24
13_F	113_A	0.583	0.24
40_Y	44_G	0.583	0.24
508_Q	515_H	0.582	0.24
534_D	569_A	0.582	0.24
520_S	662_G	0.582	0.24
378_V	588_V	0.582	0.24
329_A	364_I	0.580	0.24
185_N	234_G	0.580	0.24
72_N	102_K	0.580	0.24
101_E	104_P	0.580	0.24
230_R	241_C	0.579	0.24
330_F	495_L	0.578	0.24
501_Y	520_S	0.578	0.24
528_T	531_S	0.577	0.24
149_T	285_R	0.577	0.24
371_D	374_A	0.576	0.24
382_A	447_A	0.575	0.24
294_C	412_T	0.574	0.24
620_L	623_A	0.574	0.24
66_G	180_F	0.573	0.24
351_V	403_G	0.573	0.24
484_S	503_G	0.573	0.24
429_Q	443_L	0.572	0.24
12_E	16_E	0.572	0.24
72_N	182_P	0.572	0.24
71_L	213_A	0.570	0.24
64_E	99_S	0.569	0.24
25_D	361_Q	0.569	0.24
159_E	474_L	0.569	0.24
211_T	236_K	0.569	0.24
107_R	375_E	0.568	0.24
113_A	573_H	0.568	0.24
54_E	636_D	0.568	0.24
68_G	179_G	0.567	0.24
83_F	87_H	0.566	0.23
209_T	232_G	0.565	0.23
616_G	627_A	0.565	0.23
127_L	141_L	0.565	0.23
345_D	512_N	0.565	0.23
74_L	104_P	0.564	0.23
308_Q	498_V	0.563	0.23
435_L	609_L	0.563	0.23
182_P	209_T	0.563	0.23
417_E	460_A	0.562	0.23
463_H	632_A	0.562	0.23
65_S	162_S	0.561	0.23
75_T	615_L	0.559	0.23
109_D	574_L	0.559	0.23
359_K	536_Q	0.558	0.23
335_R	340_L	0.557	0.23
502_D	541_R	0.557	0.23
175_W	197_M	0.556	0.23
582_D	606_F	0.556	0.23
72_N	236_K	0.556	0.23
68_G	101_E	0.554	0.23
38_T	519_A	0.554	0.23
323_N	622_S	0.554	0.23
174_A	238_E	0.553	0.23
129_A	556_D	0.553	0.23
288_W	456_V	0.553	0.23
226_T	241_C	0.553	0.23
390_G	608_D	0.553	0.23
524_G	623_A	0.553	0.23
476_V	576_M	0.553	0.23
393_T	564_C	0.553	0.23
274_I	278_L	0.552	0.23
219_G	237_R	0.551	0.23
308_Q	573_H	0.551	0.23
49_E	52_F	0.551	0.23
50_V	536_Q	0.550	0.23
267_A	455_S	0.550	0.23
456_V	461_N	0.550	0.23
178_D	216_V	0.550	0.23
405_W	630_L	0.549	0.23
253_S	257_F	0.549	0.23
507_P	625_L	0.548	0.23
568_C	649_L	0.548	0.23
34_G	38_T	0.548	0.23
188_M	211_T	0.548	0.23
180_F	234_G	0.547	0.22
194_F	216_V	0.547	0.22
64_E	189_W	0.547	0.22
313_P	367_M	0.547	0.22
68_G	189_W	0.546	0.22
99_S	178_D	0.546	0.22
376_L	380_V	0.545	0.22
141_L	335_R	0.545	0.22
185_N	233_F	0.545	0.22
607_D	659_L	0.545	0.22
265_R	455_S	0.544	0.22
26_D	214_G	0.543	0.22
26_D	209_T	0.543	0.22
185_N	216_V	0.542	0.22
141_L	608_D	0.542	0.22
301_L	533_D	0.542	0.22
136_P	222_D	0.541	0.22
358_E	425_Q	0.541	0.22
108_A	265_R	0.541	0.22
111_A	115_Q	0.541	0.22
378_V	388_I	0.541	0.22
45_G	227_M	0.541	0.22
189_W	217_R	0.541	0.22
127_L	150_L	0.540	0.22
127_L	152_L	0.540	0.22
188_M	218_R	0.540	0.22
299_P	426_I	0.540	0.22
506_T	621_C	0.539	0.22
179_G	210_F	0.539	0.22
73_F	143_L	0.537	0.22
385_V	397_G	0.537	0.22
476_V	645_T	0.536	0.22
200_L	574_L	0.536	0.22
188_M	234_G	0.536	0.22
122_P	358_E	0.535	0.22
501_Y	563_R	0.535	0.22
314_L	354_L	0.535	0.22
332_F	624_P	0.534	0.22
422_Q	478_S	0.533	0.22
188_M	196_A	0.532	0.22
430_Y	580_V	0.532	0.22
112_L	369_S	0.532	0.22
300_A	412_T	0.531	0.22
434_N	445_N	0.531	0.22
267_A	588_V	0.531	0.22
204_G	322_L	0.530	0.22
80_F	570_T	0.530	0.22
308_Q	315_L	0.529	0.22
384_A	439_D	0.529	0.22
310_A	507_P	0.528	0.21
32_D	207_L	0.528	0.21
64_E	229_K	0.528	0.21
520_S	537_Q	0.528	0.21
184_K	209_T	0.528	0.21
417_E	421_Q	0.527	0.21
194_F	209_T	0.526	0.21
60_F	95_L	0.525	0.21
194_F	213_A	0.525	0.21
17_G	574_L	0.524	0.21
200_L	521_Y	0.524	0.21
536_Q	540_Q	0.524	0.21
610_F	633_Q	0.524	0.21
386_E	394_N	0.524	0.21
143_L	406_L	0.523	0.21
521_Y	613_A	0.523	0.21
486_I	515_H	0.523	0.21
292_L	421_Q	0.522	0.21
412_T	632_A	0.522	0.21
435_L	441_C	0.522	0.21
280_S	290_V	0.521	0.21
64_E	179_G	0.521	0.21
314_L	521_Y	0.521	0.21
175_W	622_S	0.521	0.21
400_Y	562_A	0.520	0.21
26_D	237_R	0.520	0.21
352_T	397_G	0.519	0.21
337_Y	615_L	0.519	0.21
525_S	529_A	0.519	0.21
383_N	394_N	0.518	0.21
229_K	235_R	0.518	0.21
102_K	156_D	0.518	0.21
214_G	237_R	0.518	0.21
143_L	581_P	0.517	0.21
170_Q	406_L	0.516	0.21
179_G	213_A	0.515	0.21
64_E	71_L	0.515	0.21
539_R	543_I	0.515	0.21
171_K	536_Q	0.514	0.21
96_H	408_P	0.514	0.21
139_H	625_L	0.514	0.21
127_L	132_P	0.513	0.21
313_P	346_H	0.512	0.21
234_G	237_R	0.512	0.21
396_S	582_D	0.511	0.21
464_Q	478_S	0.510	0.21
413_R	427_Y	0.510	0.21
282_A	368_L	0.510	0.21
63_A	398_I	0.510	0.21
38_T	176_F	0.509	0.21
590_Y	603_A	0.509	0.21
26_D	66_G	0.508	0.21
80_F	500_C	0.508	0.21
211_T	311_L	0.508	0.21
175_W	624_P	0.508	0.21
71_L	101_E	0.508	0.21
384_A	387_Q	0.508	0.21
27_V	33_N	0.507	0.20
385_V	396_S	0.507	0.20
255_P	260_T	0.507	0.20
278_L	415_V	0.507	0.20
360_S	364_I	0.507	0.20
51_R	242_G	0.506	0.20
156_D	534_D	0.506	0.20
22_R	38_T	0.505	0.20
459_L	472_S	0.505	0.20
129_A	614_A	0.504	0.20
298_A	413_R	0.504	0.20
25_D	359_K	0.504	0.20
151_D	534_D	0.504	0.20
71_L	175_W	0.504	0.20
164_L	170_Q	0.503	0.20
108_A	228_Q	0.503	0.20
214_G	222_D	0.503	0.20
45_G	208_A	0.502	0.20
651_P	657_R	0.502	0.20
68_G	180_F	0.502	0.20
242_G	364_I	0.502	0.20
43_L	416_L	0.502	0.20
221_Q	227_M	0.501	0.20
304_S	519_A	0.501	0.20
105_L	282_A	0.501	0.20
178_D	232_G	0.501	0.20
360_S	617_S	0.500	0.20
484_S	556_D	0.500	0.20

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3ps9A	1	0.988	100	0.384	Contact Map
3pvcA	1	0.9431	100	0.403	Contact Map
2qy6A	2	0.3638	100	0.757	Contact Map
4h1bA	1	0.5434	100	0.797	Contact Map
1ryiA	4	0.5299	100	0.801	Contact Map
1y56B	1	0.5404	100	0.804	Contact Map
4x9mA	1	0.5374	100	0.809	Contact Map
3axbA	2	0.5464	100	0.812	Contact Map
3dmeA	2	0.5	100	0.813	Contact Map
1c0pA	2	0.518	100	0.814	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0156 seconds.