GREMLIN Database
YDHS - Uncharacterized protein YdhS
UniProt: P77148 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG13953
Length: 534 (501)
Sequences: 956 (769)
Seq/√Len: 34.4

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
398_L407_I8.5751.00
5_A32_F5.3811.00
130_C147_N5.3061.00
219_E396_R4.8861.00
30_S127_Y4.6691.00
134_D461_Q4.4841.00
114_V124_V4.4281.00
32_F132_V4.1161.00
6_I13_G3.9641.00
110_F126_V3.9561.00
132_V144_L3.7091.00
131_Q147_N3.6221.00
393_E397_R3.6031.00
218_I228_H3.5531.00
142_V488_V3.3881.00
21_L117_A3.3641.00
5_A155_F3.3581.00
419_E422_E3.2421.00
465_T471_D3.2371.00
7_V144_L3.2161.00
23_Q518_R3.1651.00
338_E396_R3.0181.00
5_A144_L2.7841.00
195_G427_L2.7661.00
250_A333_N2.7021.00
331_E403_E2.7011.00
195_G436_F2.6321.00
212_I397_R2.6211.00
3_K28_S2.5521.00
134_D457_G2.5031.00
203_G240_L2.4911.00
478_L488_V2.4881.00
192_C438_V2.4771.00
193_N239_T2.4661.00
457_G461_Q2.4661.00
280_L286_R2.4241.00
16_T159_V2.3840.99
69_Y72_W2.3470.99
367_L372_H2.3450.99
30_S155_F2.3410.99
34_Q131_Q2.3360.99
175_T438_V2.3050.99
496_L507_T2.3040.99
17_L29_I2.3010.99
216_S228_H2.2790.99
255_P343_E2.2460.99
192_C437_D2.2340.99
279_G374_R2.2320.99
324_R327_F2.2220.99
478_L490_F2.2030.99
21_L113_L2.1860.99
334_L392_S2.1830.99
135_L158_A2.1710.99
237_N408_H2.1590.99
210_V238_I2.1540.99
32_F146_T2.1500.99
31_I110_F2.0700.99
220_D224_H2.0700.99
130_C148_Q2.0400.98
3_K30_S2.0090.98
226_V403_E1.9670.98
268_A287_L1.9460.98
336_E339_R1.9440.98
92_H95_Q1.9150.97
394_S397_R1.9010.97
64_P109_Q1.8960.97
504_Q507_T1.8900.97
160_I490_F1.8810.97
9_A31_I1.8770.97
189_V440_I1.8460.97
286_R371_D1.8390.97
412_L431_D1.8310.97
28_S125_A1.8270.97
131_Q452_D1.8150.97
135_L144_L1.8120.96
238_I407_I1.8090.96
117_A124_V1.7990.96
32_F155_F1.7910.96
220_D226_V1.7730.96
502_F508_A1.7670.96
148_Q151_P1.7160.95
323_Q327_F1.6930.95
161_A491_G1.6910.95
250_A395_I1.6530.94
341_K351_Y1.6460.94
30_S125_A1.6340.94
136_Q143_M1.6340.94
135_L462_L1.6170.93
160_I454_P1.6050.93
193_N237_N1.5970.93
199_T240_L1.5910.93
12_T390_I1.5910.93
15_Y513_G1.5840.93
427_L436_F1.5810.93
162_T452_D1.5770.93
193_N437_D1.5740.92
189_V438_V1.5440.92
142_V485_R1.5330.91
334_L399_L1.5300.91
87_K98_P1.5030.91
211_A401_L1.4630.89
499_D504_Q1.4450.89
281_L374_R1.4230.88
256_I341_K1.4220.88
264_V356_L1.4210.88
203_G207_A1.4180.88
141_G156_D1.4120.88
32_F153_E1.4040.87
221_D224_H1.4030.87
132_V146_T1.4000.87
422_E426_V1.3950.87
221_D226_V1.3900.87
251_D388_A1.3710.86
331_E335_Q1.3690.86
489_A519_A1.3690.86
224_H403_E1.3680.86
498_H502_F1.3650.86
254_C351_Y1.3600.86
485_R488_V1.3600.86
9_A13_G1.3540.85
105_Y391_P1.3500.85
42_M241_L1.3460.85
17_L124_V1.3400.85
53_M209_A1.3350.84
497_M507_T1.3300.84
402_R409_I1.3270.84
504_Q508_A1.3240.84
336_E346_T1.3230.84
502_F507_T1.3220.84
72_W75_K1.3140.83
319_A407_I1.3080.83
57_I357_H1.3020.83
489_A516_M1.2840.82
284_V363_I1.2610.81
137_I142_V1.2600.81
419_E424_R1.2580.81
351_Y355_R1.2560.81
197_M441_D1.2560.81
171_E420_I1.2500.80
292_I349_W1.2410.80
333_N347_V1.2330.79
71_E74_Q1.2230.79
159_V520_V1.2180.78
218_I226_V1.2170.78
7_V160_I1.2130.78
496_L502_F1.2070.78
5_A8_G1.1980.77
172_A423_S1.1980.77
145_A152_S1.1970.77
12_T18_F1.1930.77
208_M394_S1.1900.77
8_G11_P1.1870.77
502_F505_G1.1820.76
347_V351_Y1.1800.76
162_T505_G1.1800.76
58_A251_D1.1770.76
28_S123_A1.1750.76
181_W251_D1.1720.76
146_T150_L1.1710.76
137_I141_G1.1670.75
249_E385_D1.1620.75
10_G13_G1.1590.75
479_Q484_I1.1570.75
38_A110_F1.1530.75
360_V516_M1.1480.74
354_L383_F1.1460.74
33_E37_E1.1450.74
357_H361_Q1.1430.74
138_T143_M1.1400.74
254_C355_R1.1390.74
164_H201_L1.1380.74
180_P184_L1.1330.73
38_A126_V1.1310.73
73_L97_L1.1250.73
491_G516_M1.1200.72
65_I108_D1.1150.72
473_G477_T1.1130.72
326_P399_L1.1120.72
328_D331_E1.1110.72
57_I394_S1.1110.72
7_V10_G1.1100.72
202_S375_F1.1090.72
102_L489_A1.1010.71
399_L457_G1.0970.71
364_V367_L1.0950.71
254_C341_K1.0950.71
200_S389_A1.0900.70
291_E356_L1.0870.70
57_I61_E1.0840.70
477_T489_A1.0820.70
199_T247_L1.0780.69
208_M397_R1.0750.69
219_E224_H1.0730.69
19_S514_E1.0710.69
64_P106_F1.0690.69
354_L496_L1.0630.68
42_M55_A1.0490.67
103_G182_S1.0490.67
416_Y419_E1.0460.67
162_T450_V1.0330.66
497_M502_F1.0330.66
287_L471_D1.0320.66
236_L394_S1.0280.66
6_I17_L1.0250.65
137_I487_R1.0250.65
61_E355_R1.0230.65
263_I294_F1.0210.65
503_V506_L1.0210.65
75_K78_D1.0180.65
110_F114_V1.0180.65
34_Q128_E1.0110.64
363_I372_H1.0110.64
296_D300_S1.0090.64
267_Q270_N0.9990.63
9_A33_E0.9990.63
135_L457_G0.9970.63
68_T72_W0.9910.63
132_V518_R0.9890.63
159_V516_M0.9880.63
289_V293_K0.9870.62
34_Q398_L0.9860.62
168_D424_R0.9840.62
7_V132_V0.9740.61
8_G13_G0.9720.61
57_I504_Q0.9720.61
354_L361_Q0.9710.61
127_Y132_V0.9710.61
176_Y425_T0.9670.61
415_D418_M0.9540.60
61_E507_T0.9500.59
265_T287_L0.9460.59
109_Q113_L0.9460.59
15_Y57_I0.9430.59
99_R163_G0.9400.59
99_R198_G0.9400.59
163_G198_G0.9400.59
9_A161_A0.9390.59
107_R290_E0.9380.58
144_L147_N0.9370.58
16_T148_Q0.9340.58
271_A275_K0.9310.58
496_L508_A0.9300.58
388_A505_G0.9270.58
218_I221_D0.9260.57
143_M152_S0.9260.57
502_F506_L0.9260.57
370_H396_R0.9210.57
16_T397_R0.9200.57
61_E351_Y0.9200.57
384_I387_Y0.9180.57
513_G516_M0.9170.57
325_D328_D0.9160.57
177_F328_D0.9130.56
251_D341_K0.9130.56
252_F350_R0.9120.56
424_R435_S0.9120.56
21_L191_A0.9110.56
120_Q124_V0.9110.56
247_L439_F0.9060.56
361_Q387_Y0.9040.56
284_V367_L0.9030.56
207_A240_L0.9010.55
235_K394_S0.9010.55
516_M520_V0.9010.55
114_V126_V0.8980.55
220_D223_Q0.8980.55
496_L504_Q0.8970.55
367_L407_I0.8960.55
249_E329_W0.8940.55
34_Q37_E0.8930.55
387_Y505_G0.8900.54
200_S349_W0.8890.54
251_D389_A0.8880.54
3_K156_D0.8870.54
6_I10_G0.8820.54
330_A395_I0.8800.54
62_I69_Y0.8780.53
428_K433_S0.8770.53
354_L387_Y0.8770.53
491_G499_D0.8760.53
33_E44_Y0.8720.53
96_F391_P0.8690.53
158_A462_L0.8680.53
252_F387_Y0.8660.52
514_E518_R0.8640.52
31_I189_V0.8630.52
33_E38_A0.8630.52
181_W204_L0.8630.52
336_E344_K0.8620.52
14_I64_P0.8580.52
498_H505_G0.8570.52
351_Y507_T0.8550.51
265_T268_A0.8550.51
357_H502_F0.8540.51
127_Y130_C0.8530.51
9_A37_E0.8520.51
383_F387_Y0.8490.51
57_I502_F0.8490.51
215_G400_A0.8480.51
102_L357_H0.8470.51
17_L39_G0.8430.50
44_Y504_Q0.8420.50
247_L390_I0.8420.50
29_I471_D0.8420.50
248_P388_A0.8400.50
137_I488_V0.8370.50
96_F243_R0.8350.50
90_T440_I0.8340.50
44_Y394_S0.8330.50
462_L478_L0.8300.49
388_A503_V0.8300.49
271_A438_V0.8250.49
118_R122_F0.8200.49
19_S22_Q0.8200.49
25_T130_C0.8180.48
495_W498_H0.8170.48
113_L117_A0.8160.48
134_D152_S0.8130.48
420_I424_R0.8120.48
96_F330_A0.8120.48
102_L388_A0.8090.48
231_N235_K0.8080.47
331_E399_L0.8040.47
4_I8_G0.8030.47
227_F235_K0.8030.47
383_F502_F0.8030.47
20_L269_L0.8020.47
57_I388_A0.8010.47
411_A429_T0.8010.47
348_P442_A0.8010.47
421_N424_R0.7990.47
60_I94_R0.7990.47
456_P460_E0.7950.46
203_G500_Q0.7930.46
256_I355_R0.7910.46
53_M57_I0.7900.46
26_P47_E0.7900.46
253_Y338_E0.7880.46
133_T461_Q0.7870.46
349_W357_H0.7860.46
500_Q505_G0.7830.45
73_L91_L0.7830.45
400_A404_A0.7820.45
334_L338_E0.7800.45
267_Q271_A0.7800.45
138_T403_E0.7800.45
165_V450_V0.7790.45
384_I501_P0.7780.45
453_I492_A0.7760.45
202_S248_P0.7760.45
12_T389_A0.7760.45
309_N425_T0.7750.45
251_D365_P0.7710.44
350_R357_H0.7710.44
106_F164_H0.7700.44
256_I351_Y0.7700.44
86_V89_E0.7700.44
383_F388_A0.7690.44
337_V370_H0.7690.44
388_A504_Q0.7660.44
44_Y203_G0.7630.44
248_P503_V0.7630.44
284_V330_A0.7600.43
239_T434_Y0.7600.43
43_P55_A0.7600.43
391_P394_S0.7580.43
287_L291_E0.7570.43
251_D351_Y0.7560.43
39_G333_N0.7550.43
181_W501_P0.7530.43
224_H267_Q0.7520.43
146_T153_E0.7520.43
3_K155_F0.7520.43
337_V392_S0.7520.43
167_P195_G0.7500.43
256_I260_P0.7500.43
180_P206_A0.7490.43
216_S303_I0.7490.43
323_Q326_P0.7470.42
418_M423_S0.7460.42
202_S503_V0.7460.42
96_F383_F0.7450.42
10_G41_G0.7430.42
162_T165_V0.7430.42
485_R489_A0.7420.42
277_E283_R0.7420.42
163_G205_D0.7400.42
198_G205_D0.7400.42
99_R205_D0.7400.42
115_D417_K0.7400.42
5_A158_A0.7400.42
279_G473_G0.7360.41
422_E428_K0.7340.41
130_C133_T0.7290.41
31_I64_P0.7280.41
279_G440_I0.7270.41
357_H510_A0.7260.41
424_R437_D0.7240.40
285_F292_I0.7230.40
430_E440_I0.7220.40
200_S357_H0.7220.40
287_L442_A0.7210.40
112_R116_Q0.7200.40
137_I461_Q0.7190.40
265_T291_E0.7190.40
351_Y354_L0.7180.40
147_N152_S0.7170.40
7_V31_I0.7150.40
299_W303_I0.7150.40
30_S132_V0.7130.40
58_A347_V0.7130.40
51_K100_I0.7120.39
374_R377_K0.7120.39
309_N312_S0.7110.39
417_K428_K0.7100.39
154_T403_E0.7090.39
325_D408_H0.7060.39
240_L407_I0.7060.39
467_D471_D0.7060.39
137_I485_R0.7050.39
217_F329_W0.7040.39
29_I470_P0.7020.39
91_L95_Q0.7020.39
347_V357_H0.7010.39
18_F22_Q0.6970.38
388_A501_P0.6970.38
252_F496_L0.6970.38
471_D479_Q0.6960.38
331_E484_I0.6930.38
55_A97_L0.6930.38
44_Y209_A0.6920.38
33_E41_G0.6920.38
28_S117_A0.6910.38
335_Q488_V0.6910.38
79_S480_Q0.6900.38
168_D451_K0.6900.38
501_P505_G0.6900.38
142_V146_T0.6890.38
265_T407_I0.6890.38
57_I340_N0.6890.38
59_S269_L0.6870.37
410_L427_L0.6840.37
388_A502_F0.6830.37
8_G56_N0.6800.37
236_L390_I0.6790.37
504_Q510_A0.6790.37
63_P394_S0.6770.37
52_M213_Q0.6760.37
119_Q219_E0.6760.37
136_Q461_Q0.6760.37
70_L74_Q0.6750.37
182_S202_S0.6750.37
436_F470_P0.6740.36
345_H349_W0.6740.36
57_I65_I0.6740.36
33_E367_L0.6730.36
102_L502_F0.6720.36
252_F349_W0.6720.36
400_A406_I0.6710.36
68_T71_E0.6710.36
102_L240_L0.6700.36
12_T394_S0.6700.36
10_G56_N0.6680.36
296_D473_G0.6680.36
18_F48_E0.6670.36
374_R378_G0.6660.36
44_Y48_E0.6650.36
275_K284_V0.6650.36
60_I70_L0.6640.36
496_L505_G0.6620.35
224_H305_L0.6620.35
66_Y510_A0.6580.35
143_M154_T0.6570.35
41_G56_N0.6570.35
14_I62_I0.6560.35
68_T407_I0.6540.35
210_V231_N0.6540.35
496_L500_Q0.6540.35
102_L509_C0.6540.35
255_P341_K0.6530.35
227_F401_L0.6510.35
303_I339_R0.6510.35
57_I347_V0.6500.35
57_I512_I0.6490.34
63_P506_L0.6490.34
64_P497_M0.6490.34
419_E426_V0.6480.34
243_R404_A0.6470.34
280_L371_D0.6470.34
423_S479_Q0.6470.34
116_Q423_S0.6460.34
356_L379_L0.6460.34
235_K411_A0.6460.34
498_H506_L0.6450.34
161_A262_H0.6450.34
103_G252_F0.6450.34
353_I397_R0.6440.34
213_Q389_A0.6430.34
42_M115_D0.6420.34
272_E278_E0.6420.34
7_V104_E0.6400.34
56_N163_G0.6400.34
56_N198_G0.6400.34
56_N99_R0.6400.34
357_H512_I0.6390.34
30_S153_E0.6390.34
96_F261_L0.6390.34
219_E228_H0.6370.34
135_L241_L0.6370.34
216_S468_E0.6370.34
12_T502_F0.6350.33
142_V487_R0.6350.33
140_A228_H0.6330.33
357_H504_Q0.6320.33
55_A498_H0.6310.33
48_E390_I0.6300.33
44_Y164_H0.6280.33
20_L217_F0.6280.33
251_D502_F0.6270.33
175_T513_G0.6270.33
132_V347_V0.6260.33
213_Q230_D0.6260.33
357_H500_Q0.6260.33
148_Q152_S0.6260.33
182_S330_A0.6250.33
279_G282_D0.6240.33
58_A351_Y0.6230.33
418_M422_E0.6230.33
53_M65_I0.6230.33
254_C354_L0.6220.32
176_Y291_E0.6220.32
161_A516_M0.6200.32
182_S395_I0.6200.32
202_S506_L0.6190.32
4_I54_L0.6180.32
321_R421_N0.6180.32
97_L202_S0.6180.32
361_Q504_Q0.6170.32
383_F496_L0.6160.32
37_E40_V0.6160.32
333_N357_H0.6160.32
136_Q171_E0.6160.32
187_A269_L0.6160.32
497_M506_L0.6150.32
500_Q503_V0.6150.32
220_D228_H0.6140.32
53_M357_H0.6130.32
333_N349_W0.6130.32
291_E494_P0.6130.32
238_I406_I0.6120.32
135_L171_E0.6120.32
206_A238_I0.6110.32
102_L350_R0.6090.31
13_G16_T0.6090.31
40_V107_R0.6090.31
7_V78_D0.6090.31
61_E354_L0.6070.31
130_C152_S0.6070.31
204_L208_M0.6070.31
381_R512_I0.6040.31
31_I38_A0.6030.31
43_P444_G0.6030.31
350_R447_P0.6030.31
5_A281_L0.6020.31
264_V501_P0.6020.31
495_W505_G0.6020.31
345_H454_P0.6010.31
399_L403_E0.6010.31
4_I94_R0.6010.31
96_F337_V0.6010.31
181_W388_A0.6000.31
215_G227_F0.6000.31
159_V517_A0.5990.31
53_M105_Y0.5980.31
238_I261_L0.5980.31
266_D270_N0.5980.31
221_D311_D0.5980.31
299_W302_R0.5980.31
279_G368_N0.5970.31
53_M508_A0.5960.31
14_I113_L0.5960.31
440_I448_L0.5960.31
42_M166_W0.5950.30
331_E368_N0.5940.30
299_W345_H0.5930.30
262_H294_F0.5930.30
251_D357_H0.5930.30
88_K101_L0.5920.30
7_V466_G0.5890.30
251_D505_G0.5880.30
41_G72_W0.5880.30
160_I219_E0.5870.30
251_D273_I0.5870.30
107_R141_G0.5870.30
167_P284_V0.5860.30
162_T462_L0.5850.30
12_T63_P0.5850.30
67_C508_A0.5850.30
221_D301_Q0.5830.30
357_H387_Y0.5830.30
280_L285_F0.5820.30
118_R123_A0.5810.29
21_L29_I0.5810.29
10_G20_L0.5810.29
266_D483_D0.5800.29
505_G509_C0.5770.29
141_G304_A0.5770.29
35_A135_L0.5770.29
276_G306_E0.5760.29
375_F501_P0.5740.29
332_K336_E0.5740.29
230_D235_K0.5740.29
21_L196_I0.5740.29
29_I456_P0.5720.29
302_R368_N0.5720.29
224_H228_H0.5710.29
236_L406_I0.5710.29
347_V350_R0.5700.29
102_L385_D0.5690.29
127_Y297_P0.5690.29
59_S95_Q0.5690.29
226_V238_I0.5680.29
177_F436_F0.5680.29
293_K301_Q0.5680.29
164_H384_I0.5680.29
184_L206_A0.5660.28
71_E138_T0.5650.28
355_R365_P0.5630.28
357_H508_A0.5630.28
248_P504_Q0.5630.28
95_Q497_M0.5620.28
273_I363_I0.5600.28
361_Q502_F0.5580.28
90_T111_L0.5570.28
218_I423_S0.5570.28
26_P104_E0.5570.28
37_E107_R0.5570.28
392_S396_R0.5560.28
491_G513_G0.5560.28
53_M507_T0.5550.28
8_G20_L0.5540.28
284_V433_S0.5540.28
398_L404_A0.5530.28
200_S394_S0.5530.28
204_L383_F0.5530.28
354_L507_T0.5530.28
387_Y454_P0.5530.28
181_W384_I0.5510.27
107_R126_V0.5500.27
34_Q143_M0.5500.27
340_N357_H0.5500.27
385_D505_G0.5500.27
235_K397_R0.5500.27
70_L93_D0.5490.27
134_D145_A0.5490.27
250_A364_V0.5490.27
238_I275_K0.5490.27
150_L405_G0.5490.27
33_E39_G0.5480.27
59_S348_P0.5480.27
379_L504_Q0.5480.27
51_K98_P0.5470.27
98_P329_W0.5460.27
29_I270_N0.5460.27
98_P334_L0.5460.27
345_H361_Q0.5450.27
4_I75_K0.5450.27
103_G205_D0.5430.27
391_P502_F0.5430.27
34_Q38_A0.5420.27
11_P197_M0.5410.27
219_E457_G0.5410.27
346_T392_S0.5390.27
446_R452_D0.5390.27
31_I114_V0.5380.27
490_F495_W0.5380.27
340_N351_Y0.5370.26
268_A271_A0.5340.26
262_H409_I0.5340.26
246_I385_D0.5330.26
238_I479_Q0.5320.26
333_N340_N0.5320.26
52_M212_I0.5320.26
252_F365_P0.5310.26
210_V230_D0.5310.26
361_Q496_L0.5300.26
480_Q520_V0.5300.26
170_E176_Y0.5300.26
164_H202_S0.5290.26
419_E423_S0.5290.26
61_E341_K0.5280.26
500_Q507_T0.5280.26
252_F383_F0.5260.26
269_L363_I0.5240.26
158_A472_V0.5240.26
102_L251_D0.5240.26
211_A389_A0.5240.26
205_D391_P0.5240.26
122_F430_E0.5240.26
74_Q272_E0.5220.25
55_A203_G0.5210.25
44_Y500_Q0.5210.25
40_V46_D0.5210.25
426_V433_S0.5210.25
396_R452_D0.5210.25
219_E225_V0.5200.25
26_P321_R0.5200.25
266_D484_I0.5200.25
496_L506_L0.5200.25
34_Q442_A0.5180.25
158_A488_V0.5180.25
331_E422_E0.5180.25
261_L291_E0.5170.25
211_A231_N0.5160.25
295_A472_V0.5160.25
87_K90_T0.5160.25
58_A61_E0.5160.25
61_E388_A0.5150.25
240_L406_I0.5150.25
141_G154_T0.5140.25
71_E440_I0.5140.25
44_Y391_P0.5140.25
252_F357_H0.5130.25
25_T422_E0.5130.25
214_H411_A0.5100.25
58_A341_K0.5100.25
12_T44_Y0.5100.25
57_I208_M0.5100.25
393_E403_E0.5090.25
275_K283_R0.5090.25
228_H448_L0.5090.25
29_I220_D0.5090.25
251_D501_P0.5080.25
190_D238_I0.5080.25
79_S277_E0.5070.25
244_T497_M0.5070.25
256_I496_L0.5070.25
57_I503_V0.5070.25
138_T154_T0.5070.25
107_R111_L0.5050.24
6_I31_I0.5050.24
96_F350_R0.5050.24
410_L462_L0.5050.24
308_L462_L0.5040.24
320_E470_P0.5040.24
360_V376_S0.5040.24
506_L510_A0.5020.24
105_Y390_I0.5020.24
142_V155_F0.5000.24
11_P400_A0.5000.24
31_I125_A0.5000.24
317_W511_E0.5000.24
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
4d7eA 2 0.661 100 0.788 Contact Map
4tm3A 4 0.7116 100 0.797 Contact Map
3s5wA 1 0.6966 99.9 0.815 Contact Map
2gv8A 2 0.6217 99.9 0.817 Contact Map
3d1cA 2 0.618 99.9 0.819 Contact Map
4ap3A 1 0.7996 99.9 0.823 Contact Map
4b63A 4 0.7397 99.9 0.823 Contact Map
4rg3A 1 0.8127 99.9 0.827 Contact Map
2xveA 2 0.5974 99.9 0.834 Contact Map
1w4xA 1 0.8052 99.9 0.834 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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